Miyakogusa Predicted Gene
- Lj0g3v0322659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0322659.1 Non Characterized Hit- tr|I1KVG3|I1KVG3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,26.85,1e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT ,CUFF.21898.1
(391 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 661 0.0
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 302 5e-82
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 301 8e-82
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 283 1e-76
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 283 2e-76
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 283 3e-76
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 279 3e-75
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 278 9e-75
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 275 4e-74
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 273 3e-73
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 273 3e-73
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 268 5e-72
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 268 5e-72
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 268 5e-72
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 268 5e-72
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 268 6e-72
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 268 9e-72
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 266 2e-71
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 266 2e-71
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 266 3e-71
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 266 3e-71
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 265 5e-71
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 264 1e-70
Medtr3g052720.1 | organelle transcript processing protein, putat... 263 2e-70
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 262 4e-70
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 262 5e-70
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 262 5e-70
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 260 2e-69
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 4e-69
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 258 6e-69
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 258 1e-68
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 257 1e-68
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 257 2e-68
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 255 5e-68
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 255 6e-68
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 254 8e-68
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 253 2e-67
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 253 2e-67
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 253 3e-67
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 251 8e-67
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 251 8e-67
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 251 8e-67
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 251 1e-66
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 251 1e-66
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 250 1e-66
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 250 1e-66
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 250 2e-66
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 249 4e-66
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 248 5e-66
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 248 8e-66
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 248 9e-66
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 248 9e-66
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 248 1e-65
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 248 1e-65
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 247 1e-65
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 247 1e-65
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 247 1e-65
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 247 2e-65
Medtr5g006420.1 | organelle transcript processing protein, putat... 246 2e-65
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 246 4e-65
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 245 4e-65
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 245 5e-65
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 245 6e-65
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 245 6e-65
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 244 9e-65
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 4e-64
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 242 5e-64
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 241 8e-64
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 241 1e-63
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 239 4e-63
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 239 4e-63
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 5e-63
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 238 6e-63
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 238 7e-63
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 9e-63
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 9e-63
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 238 1e-62
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 237 1e-62
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 237 1e-62
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 237 1e-62
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 237 2e-62
Medtr4g113830.1 | organelle transcript processing protein, putat... 236 2e-62
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 236 2e-62
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 236 3e-62
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 236 3e-62
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 235 7e-62
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 1e-61
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 1e-61
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 233 2e-61
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 233 2e-61
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 233 2e-61
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 233 2e-61
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 232 4e-61
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 232 5e-61
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 232 5e-61
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 231 6e-61
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 231 9e-61
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 231 1e-60
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 231 1e-60
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 231 1e-60
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 231 1e-60
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 230 2e-60
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 230 2e-60
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 230 2e-60
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 229 3e-60
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 229 3e-60
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 229 3e-60
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 229 5e-60
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 5e-60
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 228 5e-60
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 7e-60
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 7e-60
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 9e-60
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 227 1e-59
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 227 1e-59
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 227 2e-59
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 227 2e-59
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 227 2e-59
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 227 2e-59
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 226 2e-59
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 226 2e-59
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 226 2e-59
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 3e-59
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 6e-59
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 225 7e-59
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 225 7e-59
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 8e-59
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 1e-58
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 224 1e-58
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 223 2e-58
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 221 8e-58
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 221 1e-57
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 221 1e-57
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 220 2e-57
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 220 2e-57
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 220 2e-57
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 219 4e-57
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 219 4e-57
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 219 5e-57
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 218 9e-57
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 218 1e-56
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 217 2e-56
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 217 2e-56
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 216 2e-56
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 216 3e-56
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 216 3e-56
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 216 3e-56
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 216 3e-56
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 216 4e-56
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 216 4e-56
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 215 5e-56
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 215 6e-56
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 215 7e-56
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 214 8e-56
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 214 8e-56
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 214 8e-56
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 214 8e-56
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 214 1e-55
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 214 1e-55
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 213 2e-55
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 213 2e-55
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 213 2e-55
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 213 2e-55
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 213 3e-55
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 213 3e-55
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 213 3e-55
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 213 4e-55
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 212 4e-55
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 212 4e-55
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 212 5e-55
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 211 1e-54
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 211 1e-54
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 209 2e-54
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 209 3e-54
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 209 3e-54
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 209 4e-54
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 209 4e-54
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 209 4e-54
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 208 6e-54
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 208 8e-54
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 208 8e-54
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 208 8e-54
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 208 9e-54
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 2e-53
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 206 3e-53
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 206 3e-53
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 206 3e-53
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 206 3e-53
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 206 4e-53
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 205 5e-53
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 205 5e-53
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 205 6e-53
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 205 6e-53
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 205 6e-53
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 204 1e-52
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 204 1e-52
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 204 1e-52
Medtr1g059720.1 | organelle transcript processing protein, putat... 204 2e-52
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 204 2e-52
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 203 3e-52
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 202 5e-52
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 200 2e-51
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 200 2e-51
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 199 3e-51
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 4e-51
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 4e-51
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 4e-51
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 5e-51
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 199 5e-51
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 199 5e-51
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 198 8e-51
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 198 9e-51
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 197 1e-50
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 197 2e-50
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 197 2e-50
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 196 5e-50
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 194 9e-50
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 194 9e-50
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 194 1e-49
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 194 1e-49
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 194 1e-49
Medtr3g117150.1 | organelle transcript processing protein, putat... 194 1e-49
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 194 2e-49
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 192 3e-49
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 190 2e-48
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 190 2e-48
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 189 3e-48
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 189 5e-48
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 189 6e-48
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 189 6e-48
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 188 9e-48
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 187 2e-47
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 185 7e-47
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 185 9e-47
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 184 1e-46
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 184 1e-46
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 184 1e-46
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 184 1e-46
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 184 2e-46
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 183 3e-46
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 180 2e-45
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 179 4e-45
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 178 7e-45
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 176 2e-44
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 176 3e-44
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 176 4e-44
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 175 7e-44
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 175 8e-44
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 174 1e-43
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 172 3e-43
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 172 3e-43
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 171 9e-43
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 171 1e-42
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 171 1e-42
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 170 2e-42
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 166 4e-41
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 165 9e-41
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 161 8e-40
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 160 2e-39
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 160 2e-39
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 154 2e-37
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 151 9e-37
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 149 7e-36
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 147 1e-35
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 141 1e-33
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 138 8e-33
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 136 3e-32
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 133 2e-31
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 129 3e-30
Medtr6g460480.1 | organelle transcript processing protein, putat... 124 1e-28
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 123 3e-28
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 122 7e-28
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 122 9e-28
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 121 1e-27
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 121 1e-27
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 121 1e-27
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 121 1e-27
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 120 3e-27
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 119 4e-27
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 114 1e-25
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 112 5e-25
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 110 2e-24
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 107 3e-23
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 105 1e-22
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 103 3e-22
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 102 5e-22
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 101 1e-21
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 100 4e-21
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 96 7e-20
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 1e-19
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 94 2e-19
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 94 2e-19
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 3e-19
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 94 3e-19
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 93 4e-19
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 92 1e-18
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 91 2e-18
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 91 2e-18
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 3e-18
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 91 3e-18
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 3e-18
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 90 3e-18
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 90 3e-18
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 90 3e-18
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 5e-18
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 89 6e-18
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 88 1e-17
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 88 1e-17
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 88 1e-17
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 87 2e-17
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 87 2e-17
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 87 3e-17
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 87 3e-17
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 87 3e-17
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 87 4e-17
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 5e-17
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 86 6e-17
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 86 6e-17
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 86 6e-17
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 7e-17
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 86 7e-17
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 86 7e-17
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 86 7e-17
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 86 7e-17
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 86 7e-17
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 86 7e-17
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 9e-17
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 1e-16
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 1e-16
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 85 1e-16
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 1e-16
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 1e-16
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 2e-16
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 84 2e-16
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 2e-16
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 84 2e-16
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 4e-16
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 83 5e-16
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 5e-16
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 82 7e-16
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 82 8e-16
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 9e-16
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 9e-16
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 82 1e-15
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 82 1e-15
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 81 1e-15
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 2e-15
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 2e-15
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 80 3e-15
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 80 4e-15
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 80 4e-15
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 4e-15
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 5e-15
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 79 6e-15
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 79 7e-15
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 79 8e-15
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 79 9e-15
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 9e-15
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 9e-15
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 79 1e-14
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 78 1e-14
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 78 2e-14
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 2e-14
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 77 2e-14
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 3e-14
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 77 4e-14
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 76 5e-14
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 76 6e-14
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 8e-14
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 75 9e-14
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 75 9e-14
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 9e-14
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 9e-14
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 75 1e-13
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 1e-13
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 75 2e-13
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 74 2e-13
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 74 2e-13
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 74 2e-13
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505... 74 2e-13
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 74 3e-13
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 74 4e-13
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 73 4e-13
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 5e-13
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 73 5e-13
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 6e-13
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 72 6e-13
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 72 6e-13
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 8e-13
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 72 9e-13
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 72 9e-13
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 1e-12
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 1e-12
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 1e-12
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 71 2e-12
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 71 2e-12
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 71 2e-12
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 2e-12
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 71 2e-12
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 71 2e-12
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 71 2e-12
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 71 2e-12
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 71 2e-12
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 3e-12
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 70 3e-12
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 3e-12
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 70 3e-12
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 70 3e-12
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 70 3e-12
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 69 6e-12
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 6e-12
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 69 7e-12
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 69 7e-12
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 69 7e-12
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 69 7e-12
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 7e-12
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 8e-12
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 69 9e-12
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 68 1e-11
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 1e-11
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 68 1e-11
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 68 1e-11
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 68 2e-11
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-11
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 68 2e-11
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 67 2e-11
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 67 2e-11
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 67 2e-11
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 67 2e-11
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 67 3e-11
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 67 3e-11
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 3e-11
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 67 3e-11
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 67 3e-11
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-11
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 67 3e-11
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 4e-11
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-11
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 67 4e-11
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-11
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 66 5e-11
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:... 66 5e-11
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 66 5e-11
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 66 5e-11
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 7e-11
Medtr2g007050.1 | PPR containing plant-like protein | HC | chr2:... 66 7e-11
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 66 7e-11
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 66 7e-11
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 66 8e-11
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 66 8e-11
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 66 8e-11
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 66 8e-11
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 65 8e-11
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 9e-11
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-10
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 65 1e-10
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 65 1e-10
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 65 1e-10
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 64 2e-10
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 2e-10
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 64 2e-10
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 64 2e-10
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 64 2e-10
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 64 2e-10
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 64 2e-10
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 64 2e-10
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 64 2e-10
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 64 2e-10
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 64 3e-10
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 3e-10
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 64 3e-10
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 3e-10
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 3e-10
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 4e-10
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 4e-10
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 63 4e-10
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/394 (80%), Positives = 349/394 (88%), Gaps = 4/394 (1%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MYSV GLMD A + EG++ N DDQS NSMINGYVQAGQL KAQELFDTVPIRNKIAWTC
Sbjct: 341 MYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTC 400
Query: 61 MISGYLSAGQVFKACDLFDSMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
MISGYLSAGQV KA +LFD MPD +DSIAWT MI GYVQNELIAEAI+LF EMMA G S
Sbjct: 401 MISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGAS 460
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY--DLILENSLVSMYAKCGEIDDSY 176
P+N T+AVLFGA+GSVAYLD G QLH MQ+KTIYEY D+ LENSL+SMYAKCGEI+D+Y
Sbjct: 461 PINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAY 520
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
RIFSNM RDKISWNSMIMGLSDHGRA+EAL +YETMLEFG+YPD VTFLGVLTACAHAG
Sbjct: 521 RIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAG 580
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
VDKG ELF+ M+N Y LQPG +HY+SIIN+LGRAG+VKDAEEFVLRLPVEPNH IWGAL
Sbjct: 581 FVDKGCELFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGAL 640
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+GVCGLSKTDAD+A RA RLLELDPLNAPGHV LCNIYAANDRH+E TSLR+EMR+KGV
Sbjct: 641 IGVCGLSKTDADIARRAATRLLELDPLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGV 700
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQ 390
RKAPGCSWILVKG+VH FSSGDRL+P E++LLQ
Sbjct: 701 RKAPGCSWILVKGKVHAFSSGDRLDPLAEEMLLQ 734
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 130/248 (52%), Gaps = 15/248 (6%)
Query: 15 LEGNLNNFDDQ------SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA 68
LE FDD S N+MI GYV+ G+++ A++LFD + RN I WT MISGY
Sbjct: 181 LEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRV 240
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVL 127
G V +A LF MP+++ ++WT+MI G+ N EA+ LF +MM P TF L
Sbjct: 241 GDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSL 300
Query: 128 FGAMGSVAYLDQGRQLHGMQVKTIY---EYDLILENSLVSMYAKCGEIDDSYRIFS-NMA 183
A + + G+QLH + + +YD L SLV MY+ CG +D + +F +M
Sbjct: 301 VYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMK 360
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
D S+NSMI G G+ +A +++T+ + + + +++ AG V K
Sbjct: 361 NCDDQSFNSMINGYVQAGQLHKAQELFDTV----PIRNKIAWTCMISGYLSAGQVLKASN 416
Query: 244 LFNSMVNS 251
LF+ M +S
Sbjct: 417 LFDDMPDS 424
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 46/308 (14%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
+ N+M++ Y+Q+G +A+ FD +P RN ++WT M+SGY G + A +FD MP+R+
Sbjct: 105 TYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERN 164
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++W SM+ G ++N + EA +F + N Y++ GR
Sbjct: 165 VVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIE---------GYVENGRMDDA 215
Query: 146 MQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+ I ++I S++S Y + G++++++R+F M ++ +SW +MI G + +G
Sbjct: 216 KDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYR 275
Query: 205 EALTVYETMLEFG-LYPDTVTFLGVLTACA-----------HAGLVDKGWELFN------ 246
EAL ++ M+ P+ TF+ ++ ACA HA ++ W+L +
Sbjct: 276 EALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLG 335
Query: 247 -SMVNSYGLQPGFD----------------HYISIINLLGRAGKVKDAEEFVLRLPVEPN 289
S+V Y + D + S+IN +AG++ A+E +P+ N
Sbjct: 336 RSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIR-N 394
Query: 290 HAIWGALV 297
W ++
Sbjct: 395 KIAWTCMI 402
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 53/269 (19%)
Query: 34 YVQAGQLEKAQELFDTVPIRN----KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
Y+ G L +A+ + + P N + WT M++ Y G V +A +LFD MP R+ + +
Sbjct: 47 YLTNGFLHEARTILHSFPSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTY 106
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
+M+S Y+Q+ + +A F +M
Sbjct: 107 NAMLSAYLQSGMTRQAKRFFDDMP------------------------------------ 130
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
E +++ +++S YA G IDD+ ++F M R+ +SWNSM++GL +G EA V
Sbjct: 131 ---ERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKV 187
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 269
++ + + V++ ++ G +D +LF+ + + + S+I+
Sbjct: 188 FDDTPD----KNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVIT-----WTSMISGYC 238
Query: 270 RAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
R G V +A +P E N W A++G
Sbjct: 239 RVGDVNEAFRLFQIMP-EKNVVSWTAMIG 266
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 236/386 (61%), Gaps = 2/386 (0%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
Y G++D A + + ++ S N+MI GYVQ +++ A+ELF+++P RN +W M
Sbjct: 276 YVQNGMLDEAKTFFD-EMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTM 334
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+GY G + +A FD MP RD ++W ++I+GY Q+ EA+++F E+ G S
Sbjct: 335 ITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNR 394
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
TF +A L+ G+Q+HG VK Y + N+L++MY KCG ID++ F
Sbjct: 395 ATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEG 454
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+ +D +SWN+M+ G + HG +ALTV+E+M G+ PD +T +GVL+AC+H GL+D+G
Sbjct: 455 IEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRG 514
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
E F SM YG+ P HY +I+LLGRAG++++A++ + +P +P A WGAL+G
Sbjct: 515 TEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASR 574
Query: 302 LSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 361
+ + ++ +A + + +++P N+ +V L N+YAA+ R ++ +R +MR GV+K PG
Sbjct: 575 I-HGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPG 633
Query: 362 CSWILVKGRVHVFSSGDRLEPHVEDI 387
SW+ V+ ++H FS GD P E I
Sbjct: 634 YSWVEVQNKIHTFSVGDCSHPEKERI 659
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 10/231 (4%)
Query: 20 NNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 79
+++D S N ++ G+V+ +L A+ LFD +P+R+ I+W MISGY G + +A LFD
Sbjct: 200 SDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD 259
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
P RD WT+M+SGYVQN ++ EA + F EM N A +D
Sbjct: 260 ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIA----GYVQTKKMDI 315
Query: 140 GRQL-HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
R+L M + I + N++++ Y + G+I + + F M RD +SW ++I G +
Sbjct: 316 ARELFESMPCRNISSW-----NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYA 370
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
G EAL ++ + + G + TF L+ CA ++ G ++ V
Sbjct: 371 QSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAV 421
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 20/273 (7%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI+GY++ + A+ LFD +P R+ +W M++GY+ ++ A LFD MP++D
Sbjct: 82 SYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKD 141
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR-QLH 144
++W S++SGY QN + EA +F M NG A AY+ GR +
Sbjct: 142 VVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLA---------AYVHNGRIEEA 192
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+ ++ ++DLI N L+ + + ++ D+ +F M RD ISWN+MI G + G S
Sbjct: 193 CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLS 252
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
+A +++ D T+ +++ G++D+ F+ M + Y ++
Sbjct: 253 QARRLFDE----SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS-----YNAM 303
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
I + K+ A E +P N + W ++
Sbjct: 304 IAGYVQTKKMDIARELFESMPCR-NISSWNTMI 335
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 49/275 (17%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S NS+++GY Q G +++A+E+FD +P +N I+W +++ Y+ G++ +AC LF+S
Sbjct: 141 DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKS 200
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D D I+W ++ G+V+ + + +A LF +M P+
Sbjct: 201 DWDLISWNCLMGGFVRKKKLGDARWLFDKM------PVR--------------------- 233
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
D I N+++S YA+ G + + R+F RD +W +M+ G +G
Sbjct: 234 ------------DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGM 281
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EA T ++ M E + V++ ++ +D ELF SM +
Sbjct: 282 LDEAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDIARELFESMPCR-----NISSWN 332
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
++I G+ G + A +F +P + + W A++
Sbjct: 333 TMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAII 366
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 8/163 (4%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
+ W IS ++ G A +F++MP R S+++ +MISGY++N A +LF +M
Sbjct: 50 LKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER 109
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
N V+ L R+L + + E D++ NSL+S YA+ G +D++
Sbjct: 110 DLFSWN----VMLTGYVRNCRLGDARRLFDL----MPEKDVVSWNSLLSGYAQNGYVDEA 161
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
+F NM ++ ISWN ++ +GR EA ++E+ ++ L
Sbjct: 162 REVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL 204
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 301 bits (770), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 235/370 (63%), Gaps = 2/370 (0%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MYS+FG D A G + N D + NS+I+GY+ +++ A E+F+ +P ++ I+WT
Sbjct: 301 MYSLFGYTDMAKKVFSG-MGNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLISWTA 359
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
MI G+ + G++ KA +LFD++ ++D WT +ISG+V NE EA+ F M P
Sbjct: 360 MIRGFATDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPN 419
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + + A S+ L++G Q+H +K EYDL ++NSL+S YAKCG + D+Y+IF
Sbjct: 420 PLTISSVLSASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFV 479
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
++ + +S+NS+I G + +G EAL++Y+ M L P+ VTFL VL+AC HAGL+++
Sbjct: 480 DVVEPNVVSYNSVINGFAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEE 539
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GW LFN+M + YG++P DHY +++LLGRAG + +A FV +P+EP+ +WGAL+
Sbjct: 540 GWNLFNTMKSRYGIEPEADHYACMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALLAA- 598
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ D+A A + + EL+P NA +V L N Y+A+ + E +RK +KG++K+P
Sbjct: 599 SCAHQRIDLAKLAAQHITELEPANATPYVVLSNTYSASGQKFEGDLVRKTKNLKGIKKSP 658
Query: 361 GCSWILVKGR 370
GCSWI +K +
Sbjct: 659 GCSWITIKDK 668
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 127/224 (56%), Gaps = 7/224 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPI--RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
N++INGY++ G++ +A +F+ V + R+ ++W+ ++ G G++ A LFD MP+R+
Sbjct: 161 NALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERN 220
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT-FAVLFGAMGSVAYLDQGRQLH 144
++W++MI GY++ L LF +M G +N T ++ G+ + +G Q+H
Sbjct: 221 VVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIH 280
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G+ + +E+ +L N++++MY+ G D + ++FS M +D ++WNS+I G +
Sbjct: 281 GLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVD 340
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
A V+E M E D +++ ++ A G + K ELF+++
Sbjct: 341 AAYEVFERMPE----KDLISWTAMIRGFATDGRIGKAVELFDTL 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 124/243 (51%), Gaps = 15/243 (6%)
Query: 38 GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 97
G + A+ +F+ + +N + WT M++ Y GQ+ A LFD MP+R + + +MISGY+
Sbjct: 44 GNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYI 103
Query: 98 QNEL-IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-D 155
+N + +A LF H + + ++A + + D +L+ + +E+ D
Sbjct: 104 RNGCNVTKAYELFTSF--HDRNEV--SYAAMIMGLVKARKFDLAEKLYR---EAPHEFRD 156
Query: 156 LILENSLVSMYAKCGEIDDSYRIFSN--MAYRDKISWNSMIMGLSDHGRASEALTVYETM 213
+ N+L++ Y K GE++++ R+F N ++ RD +SW++++ GL GR A +++ M
Sbjct: 157 PVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRM 216
Query: 214 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 273
E + V++ ++ GL + G+ LF M ++ +I G G+
Sbjct: 217 PE----RNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGR 272
Query: 274 VKD 276
VK+
Sbjct: 273 VKE 275
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/382 (37%), Positives = 232/382 (60%), Gaps = 2/382 (0%)
Query: 6 GLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGY 65
G +D AS LN D NSMI GY Q+G++ +A LF +P++N ++W MISGY
Sbjct: 342 GRIDEASQVF-SQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGY 400
Query: 66 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 125
AG++ +A ++F++M R+ I+W S+I+G++QN L +A+ M G P TFA
Sbjct: 401 AQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFA 460
Query: 126 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
+ ++A L G+QLH + +K+ Y DL + N+L++MYAKCG + + ++F ++
Sbjct: 461 CSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGV 520
Query: 186 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 245
D ISWNS+I G + +G A+EA +E M G PD VTF+G+L+AC+HAGL ++G +LF
Sbjct: 521 DLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLF 580
Query: 246 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 305
M+ + ++P +HY +++LLGR G++++A V + V+ N +WG+L+ C + K
Sbjct: 581 KCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHK- 639
Query: 306 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+ ++ A RLLEL+P NA ++ L N++A R ++ LR MR + K PGCSWI
Sbjct: 640 NMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWI 699
Query: 366 LVKGRVHVFSSGDRLEPHVEDI 387
V+ ++ F S D + E I
Sbjct: 700 EVQNQIQNFVSDDPGKLRTESI 721
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 144/281 (51%), Gaps = 31/281 (11%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N M+ G+V L A ELF+ +P N ++W M+ G+ G++ +A LFD MP ++
Sbjct: 206 SWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKN 265
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG--TFAVLFGAMGSVAYLDQGRQL 143
++W +MI+ YVQ+ I EA+ LF E +P ++ + V LD+ R++
Sbjct: 266 VVSWNAMIAAYVQDLQIDEAVKLFKE------TPYKDCVSWTTMINGYVRVGKLDEAREV 319
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
+ + Y+ D+ + +L+S + G ID++ ++FS + RD I WNSMI G GR
Sbjct: 320 YN---QMPYK-DVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRM 375
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF-----------NSMVNSY 252
SEAL ++ M + V++ +++ A AG +D+ E+F NS++ +
Sbjct: 376 SEALNLFRQM----PVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGF 431
Query: 253 GLQPG--FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
LQ G D S++ L+G+ GK D F L N A
Sbjct: 432 -LQNGLYLDALKSLV-LMGQEGKKPDQSTFACSLSSCANLA 470
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 49/293 (16%)
Query: 6 GLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGY 65
G +D A N+ + + + NSM+ + + G++ A++LFD + RN ++W MI+GY
Sbjct: 31 GKIDEAKRVF-SNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGY 89
Query: 66 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 125
L V +A LFD M +RD+ +W MI+ Y + ++ +A LF E++
Sbjct: 90 LHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELF-ELVPD---------- 138
Query: 126 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
+ D N++++ YAK G DD+ ++F M +
Sbjct: 139 ---------------------------KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVK 171
Query: 186 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 245
D +S+NSM+ G + +G+ A+ +E M E + + G + C + WELF
Sbjct: 172 DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCD----LGSAWELF 227
Query: 246 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ + P +++++ R GK+ +A + R+P + N W A++
Sbjct: 228 EKIPD-----PNAVSWVTMLCGFARHGKIVEARKLFDRMPCK-NVVSWNAMIA 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 131 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 190
+G+ + L+Q + + K IY K G+ID++ R+FSN+ +++ ++
Sbjct: 5 IGTRSTLEQSKNVFNQNKKIIY-------------LGKQGKIDEAKRVFSNVIHKNHATY 51
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
NSM+ + +GR S+A +++ M + L G L H +V++ +LF+ M
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYL----HNNMVEEAHKLFDLMAE 107
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ +I R G ++ A E +P + + A W A++
Sbjct: 108 RDNFS-----WALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIA 150
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 225/386 (58%), Gaps = 2/386 (0%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
Y G++D A + + + + N MI GYVQ +++ A+ELF+ +P RN +W +
Sbjct: 244 YVQSGMLDEARRVFD-EMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTI 302
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
ISGY G + +A +LFD M RD ++W ++I+GY Q + + + +M G S
Sbjct: 303 ISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNR 362
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
TF +A L G+Q+HG VKT Y+ ++ N+L+ MY KCG I ++Y +F
Sbjct: 363 STFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFER 422
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
M +D ISWN+M+ G + HG +AL V+++M G PD +T +GVL AC+H GL D+G
Sbjct: 423 MQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRG 482
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
E F SM YG+ P HY +I+LLGRAG +++A + +P EP+ A WGAL+G
Sbjct: 483 TEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASR 542
Query: 302 LSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 361
+ +A++ +A + + ++P NA +V L N+YA + +++ LR +MR G++K PG
Sbjct: 543 IH-GNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPG 601
Query: 362 CSWILVKGRVHVFSSGDRLEPHVEDI 387
SW+ V+ ++H F+ GD P + I
Sbjct: 602 YSWVEVQNKIHKFTVGDCFHPEKDRI 627
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 25/270 (9%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N ++ GYV+ L A+ LFD +P+RN I+W MISGY G + +A LF+ P RD
Sbjct: 174 SWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRD 233
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY--LDQGRQL 143
WT+M+ YVQ+ ++ EA +F EM P A G V Y +D R+L
Sbjct: 234 VFTWTAMVFAYVQSGMLDEARRVFDEM------PGKREMAYNVMIAGYVQYKKMDMAREL 287
Query: 144 -HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
M + + + N+++S Y + G+I + +F M RD +SW ++I G + G
Sbjct: 288 FEAMPCRNVGSW-----NTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGH 342
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACA-HAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+ + + M G + TF L+ CA A LV V+ ++ G+D+
Sbjct: 343 YEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALV------LGKQVHGQAVKTGYDNG 396
Query: 262 I----SIINLLGRAGKVKDAEEFVLRLPVE 287
+++ + + G + +A + R+ ++
Sbjct: 397 CLVGNALLEMYCKCGSIGEAYDVFERMQLK 426
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 115/218 (52%), Gaps = 12/218 (5%)
Query: 31 INGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 90
I+ +++ G A +FD++P +N +W M++GY+ ++ A +LFD MP +D+++W
Sbjct: 55 ISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWN 114
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
M+SGYV++ + EA +F M NG AV L++ R+L +V
Sbjct: 115 VMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYV----QNGRLEEARRLFESKV-- 168
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 210
+++LI N L+ Y K + D+ R+F +M R+ ISWN+MI G + G +A ++
Sbjct: 169 --DWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLF 226
Query: 211 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
E D T+ ++ A +G++D+ +F+ M
Sbjct: 227 EE----SPVRDVFTWTAMVFAYVQSGMLDEARRVFDEM 260
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 223/368 (60%), Gaps = 7/368 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y + ++ +A+ +FD +P+R+ ++ T M+SGY A V A +F +M +R+ +
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVV 351
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH--- 144
+W ++I+GY QN EA+ LF + P + TF L A ++A L GRQ H
Sbjct: 352 SWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHI 411
Query: 145 ---GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
G K+ + D+ + NSL+ MY KCG ++D +F M RD +SWN+MI+G + +G
Sbjct: 412 LKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNG 471
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+EAL ++ ML G PD VT +GVL+AC+HAGLV++G F SM +GL P DHY
Sbjct: 472 YGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY 531
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LLGRAG + +A + +P+EP+ +WG+L+ C + + + +RLLE+D
Sbjct: 532 TCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKV-HGNITLGKYVAERLLEID 590
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
PLN+ +V L N+YA R ++ +RK+MR GV K PGCSWI ++ +HVF D+
Sbjct: 591 PLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRH 650
Query: 382 PHVEDILL 389
PH +DI L
Sbjct: 651 PHKKDIYL 658
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 135/260 (51%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +++ Y + G LE A+++FD + RN +W ++ G + +A +LF MP+RD
Sbjct: 58 NRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQC 117
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +M+SG+ Q + EA+ +M + F +F A + L G Q+HG+
Sbjct: 118 SWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLI 177
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K+ Y D+ + ++LV MY+KC + + R F +M R+ +SWNS+I +G A +AL
Sbjct: 178 AKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKAL 237
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
V+ M+ G+ PD +T V +ACA + +G ++ ++ + +++++
Sbjct: 238 EVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDM 297
Query: 268 LGRAGKVKDAEEFVLRLPVE 287
+ +V +A R+P+
Sbjct: 298 YAKCRRVNEARLVFDRMPLR 317
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y V A FD M R+ ++W S+I+ Y QN +A+ +F MM G
Sbjct: 190 SALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIE 249
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T A + A S++ + +G Q+H +K Y DL+L N+LV MYAKC ++++
Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARL 309
Query: 178 I-------------------------------FSNMAYRDKISWNSMIMGLSDHGRASEA 206
+ FSNM R+ +SWN++I G + +G EA
Sbjct: 310 VFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEA 369
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV-NSYGLQPGFDHYI--- 262
+ ++ + ++P TF +L ACA+ + G + ++ + + + G D I
Sbjct: 370 VRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVG 429
Query: 263 -SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
S+I++ + G V+D V +E ++ W A++
Sbjct: 430 NSLIDMYMKCGLVEDG-RLVFERMLERDNVSWNAMI 464
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
FA L + + R +H +KT + ++ ++N LV +Y KCG ++D+ ++F +M
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLE 215
R+ SWN+++ L+ G EAL +++ M E
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPE 113
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 234/414 (56%), Gaps = 64/414 (15%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
+ +MI GY Q G+L++A+ELFD + +RN WT M+SGY G+V A LF+ MP+R+
Sbjct: 179 VTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNE 238
Query: 87 IAWTSMISGYVQNELIAEAISLF--------------------------GEMMAHGFSPL 120
++WT+M+ GY Q+ + EA LF MM G
Sbjct: 239 VSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKER 298
Query: 121 N---------------------GTFAVL--------FGAMGSV-------AYLDQGRQLH 144
+ G FA + F +M SV A LD GRQ+H
Sbjct: 299 DEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVH 358
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
V++ ++ DL + + L++MY KCG++ + IF+ ++D + WNSMI G S HG
Sbjct: 359 ARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGE 418
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EAL V+ M G+ PD VTF+GVL+AC+++G V +G+E+F +M +Y ++PG +HY +
Sbjct: 419 EALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACM 478
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LLGRAG+V +A E V ++P+EP+ +WGAL+G C + D+A A ++L +L+P N
Sbjct: 479 VDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGAC-RNHMKLDLAEVAVEKLAKLEPKN 537
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
A +V L ++YA R ++ LRK++ + V K PGCSWI V+ +VH+F+ GD
Sbjct: 538 AGPYVLLSHMYATKGRWRDVEVLRKKIN-RRVIKFPGCSWIEVEKKVHMFTGGD 590
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 18/312 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+M++ Y ++ + A LFD +P RN +++ MISGY+ G V A +FD MP+R+
Sbjct: 54 SWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERN 113
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++WTSM+ GYVQ ++ EA LF EM ++ V+ G + + +D ++L
Sbjct: 114 VVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV----SWTVMIGGLLKESRIDDAKKLFD 169
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
M I E D+++ +++ Y + G +D++ +F M R+ +W +M+ G + +GR
Sbjct: 170 M----IPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDV 225
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
A ++E M E + V++ +L +G + + +ELF +M + + +I
Sbjct: 226 ARKLFEVMPE----RNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACN-----EMI 276
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
G AG++ A + E + W A++ V D + + E LN
Sbjct: 277 LQFGLAGEMHRARMMFEGMK-ERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNF 335
Query: 326 PGHVALCNIYAA 337
P +++ ++ A+
Sbjct: 336 PSMISVLSVCAS 347
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 50 VPIRNKIAWTCMISGYLSAGQVFKACDLFDS--MPDRDSIAWTSMISGYVQNELIAEAIS 107
V R+ + T IS Y G + A +FD+ +P R +W +M+S Y ++ +A+
Sbjct: 14 VQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALL 73
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV-KTIYEYDLILENSLVSMY 166
LF +M NG + Y+ G +V + E +++ S+V Y
Sbjct: 74 LFDQMPQRNTVSFNGMIS---------GYVKNGMVADARKVFDVMPERNVVSWTSMVRGY 124
Query: 167 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFL 226
+ G ++++ ++F M R+ +SW MI GL R +A +++ + E D V
Sbjct: 125 VQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPE----KDVVVVT 180
Query: 227 GVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV 286
++ G +D+ ELF+ M ++ F + ++++ + G+V A + +P
Sbjct: 181 NMIGGYCQVGRLDEARELFDEM----KVRNVFT-WTTMVSGYAKNGRVDVARKLFEVMP- 234
Query: 287 EPNHAIWGALV 297
E N W A++
Sbjct: 235 ERNEVSWTAML 245
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 229/368 (62%), Gaps = 6/368 (1%)
Query: 28 NSMINGYVQAGQLEKAQ---ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
N++I+ Y ++G +E A+ EL T I N IA+T +++GY+ G V A ++FDS+ R
Sbjct: 314 NALISMYAKSGAVEVARTIVELRGTSNI-NVIAFTSLLNGYVKIGDVNPAREIFDSLKCR 372
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D +AWT+MI GY QN L+ +A+ LF M++ G P + T A + S+A LD G+QLH
Sbjct: 373 DVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLH 432
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGRA 203
+ ++ + + N+L++MY+K G I D+ ++F+ + RD ++W SMI+ L+ HG
Sbjct: 433 AIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLG 492
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+EA+ ++E ML+F L PD +T++GVL+AC H GLV++G FN M N + ++P HY
Sbjct: 493 NEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYAC 552
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+I+L GRAG +++A F+ +P+EP+ WG+L+ C + K + D+A A ++LL +DP
Sbjct: 553 MIDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRVHK-NVDLAKVAAEKLLLIDPN 611
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
N+ + AL N ++A E +RK MR + V+K G SW+ ++ +VH+F D L P
Sbjct: 612 NSGAYSALANTHSACGEWEEAAKVRKLMRDREVKKEQGFSWVQIQNKVHIFGVEDALHPQ 671
Query: 384 VEDILLQI 391
+ I I
Sbjct: 672 RDAIYRMI 679
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 9/312 (2%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
+N+++N Y + A LF +P R +W ++S Y G + A LFD +P+ DS
Sbjct: 48 MNNLLNFYSKTASFNDAHRLFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDS 107
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++WT+MI GY Q AI F +M++ G P TF + + + LD G+++H
Sbjct: 108 VSWTTMIVGYNQMGRFNTAIHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSF 167
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
VK + + NSL++MY K G+ +F M RDK +WN MI GR A
Sbjct: 168 VVKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVA 227
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
L +++ M + D +++ ++ H G K E F+ M S L+P S+++
Sbjct: 228 LALFDQMTD----RDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLS 283
Query: 267 LLGRAGKVKDAEE---FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+K ++ +++R ++ + A+ AL+ + +K+ A +R L +
Sbjct: 284 ACANLESLKLGKQIHAYIVRADIDISGAVGNALISM--YAKSGAVEVARTIVELRGTSNI 341
Query: 324 NAPGHVALCNIY 335
N +L N Y
Sbjct: 342 NVIAFTSLLNGY 353
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 133/286 (46%), Gaps = 20/286 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM- 81
D + N MI+ ++Q+G+ + A LFD + R+ I+W +I+GY G KA + F M
Sbjct: 207 DKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMF 266
Query: 82 ------PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
PD+ ++ S++S E + + ++ L
Sbjct: 267 RSSSLKPDKFTLG--SVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSG 324
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
++ R + ++++ ++I SL++ Y K G+++ + IF ++ RD ++W +MI+
Sbjct: 325 AVEVARTI--VELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIV 382
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G + + +AL ++ M+ G P++ T VL+ + +D G +L ++ ++
Sbjct: 383 GYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQL-----HAIAIR 437
Query: 256 PGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+S+ I + ++G +KDA + ++ E + W +++
Sbjct: 438 LKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMI 483
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 32/186 (17%)
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
+P + TF L + GR +H +K + L N+L++ Y+K +D++R
Sbjct: 7 TPKSDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHR 66
Query: 178 IFSNMAYR-------------------------------DKISWNSMIMGLSDHGRASEA 206
+FS M R D +SW +MI+G + GR + A
Sbjct: 67 LFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTA 126
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ ++ M+ G+ P TF VL +C G +D G ++ +S V GL S++N
Sbjct: 127 IHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKV-HSFVVKLGLSGVVPVANSLLN 185
Query: 267 LLGRAG 272
+ ++G
Sbjct: 186 MYVKSG 191
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 215/360 (59%), Gaps = 1/360 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I Y + ++ +A+ +FD +P+R+ I+W ++SGY++A ++ +A +F MP+R+ +
Sbjct: 330 NALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVL 389
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
WT MISG QN E + LF +M + G P + FA A + LD G+Q+H
Sbjct: 390 TWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQV 449
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
++ ++ L N+L++MY++CG ++ + +F M Y D +SWN+MI L+ HG +A+
Sbjct: 450 IRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAI 509
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++E M++ + PD +TFL +LTAC HAGL+ +G F++M YG+ PG DHY +I+L
Sbjct: 510 ELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDL 569
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
L RAG A+ + +P E IW AL+ C + + ++ +A RLLEL P
Sbjct: 570 LCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRI-HGNMELGIQAADRLLELIPGQDGT 628
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
++ L N+YAA + E+ +R MR +GV+K PGCSW+ V+ VHVF D P V+ +
Sbjct: 629 YIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAV 688
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 46/307 (14%)
Query: 35 VQAGQL-EKAQELFDTVPIRNKI---AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 90
V++ QL A+++FD P +N+I +WT MI+GY+ + A +L D + +AW
Sbjct: 194 VKSSQLMASARKVFDETP-KNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWN 252
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS----VAYLDQGRQLHGM 146
+MISGYV+ L EA F M + G T+ L A GS + + GRQ+HG
Sbjct: 253 AMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGY 312
Query: 147 QVKTIYE----YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS---------- 192
++T+ E + L + N+L++ Y K + ++ R+F M RD ISWN+
Sbjct: 313 ILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQR 372
Query: 193 ---------------------MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
MI GL+ +G E L ++ M GL P F G +TA
Sbjct: 373 IEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITA 432
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C+ G +D G ++ +S V G G ++I + R G V+ AE L +P +
Sbjct: 433 CSVLGSLDNGQQI-HSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSV 490
Query: 292 IWGALVG 298
W A++
Sbjct: 491 SWNAMIA 497
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 139/287 (48%), Gaps = 30/287 (10%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP--DR 84
LN +IN Y ++ + A++LFD +P + +A T ++S Y S+G V A LF++ P R
Sbjct: 43 LNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIR 102
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D++++ +MI+ Y A++LF +M +GF P TF+ + A+ +A D+ R
Sbjct: 103 DTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIA--DEERHCQ 160
Query: 145 GMQVKTIYEYDLIL---ENSLVSMYAKCG--------EIDDSYRIFSNMAYRDKI---SW 190
+ + I L++ N+L+S Y C ++ S R + +++I SW
Sbjct: 161 MLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSW 220
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
+MI G ++ L +L+ YP V + +++ GL ++ ++ F M +
Sbjct: 221 TTMIAGYVR----NDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRM-H 275
Query: 251 SYGLQPGFDHYISIINLLGRAGKV-------KDAEEFVLRLPVEPNH 290
S G+Q Y S+I+ G + + ++LR VEP+H
Sbjct: 276 SMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSH 322
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 214/362 (59%), Gaps = 1/362 (0%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
+ ++M++GYV G L+ A E F P+++ I WT MI+GY+ G+V A LF + +
Sbjct: 167 TWSAMVSGYVACGDLDAAVECFYAAPMKSVITWTAMITGYMKFGRVGLAEMLFWKLSLKT 226
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+ W +MI+GYV N + LF M+ G P + + ++ L G+Q+H
Sbjct: 227 LVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQ 286
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+ K+ D SL+SMY+KCG++ DS+ +F + +D ++WN+MI G + HG +
Sbjct: 287 LVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEK 346
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
AL +++ M + + PD +TF+ VL AC HAG+VD G + FNSMV +G++ +HY ++
Sbjct: 347 ALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMV 406
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
+LLGRAG++ +A + V +P +P+ AI+G L+G C + K+ +A A K LLELDP +A
Sbjct: 407 DLLGRAGRLSEAVDMVKSMPFKPHPAIFGTLLGACRIHKS-MHMAEFAAKNLLELDPTSA 465
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVE 385
G+V L N+YAA + + +RK M+ V K PG SWI + VH F S DRL P +
Sbjct: 466 TGYVQLANVYAAQSKWEHVARVRKSMKENNVVKPPGYSWIEINNAVHEFRSNDRLHPELV 525
Query: 386 DI 387
I
Sbjct: 526 SI 527
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 142/283 (50%), Gaps = 13/283 (4%)
Query: 18 NLNNFDDQSLNSMINGYVQA-GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
N+ + N+++ + + G E+A++LFD +P N +++ M++ YL + A D
Sbjct: 65 NMTVISTTTWNTILGAFAKKHGNFERARQLFDKIPEPNTVSYNTMLACYLHHFGIHNARD 124
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
FD MP RD+ +W +M+SGY Q ++ EA L M T++ + +
Sbjct: 125 FFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLVAMPEKNCV----TWSAMVSGYVACGD 180
Query: 137 LDQGRQ-LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
LD + + +K++ I ++++ Y K G + + +F ++ + ++WN+MI
Sbjct: 181 LDAAVECFYAAPMKSV-----ITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIA 235
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G D+GRA L +++TMLE G+ P+ ++ VL C+ + G ++ + +V L
Sbjct: 236 GYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQV-HQLVCKSPLS 294
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
S+I++ + G +KD+ + +++P + W A++
Sbjct: 295 RDTTAVTSLISMYSKCGDLKDSWDLFVQIP-RKDVVTWNAMIS 336
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 204/340 (60%), Gaps = 1/340 (0%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
I N T + Y ++ A LFD P++ +AW +MISGY QN AISLF E
Sbjct: 342 ILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKE 401
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
MM F+P T + A + L G+ +H + E ++ + +LV MYAKCG
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGN 461
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
I +++++F +M+ ++ ++WN+MI G HG EAL +Y ML G P VTFL VL A
Sbjct: 462 ISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYA 521
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C+HAGLV +G E+F++MVN Y ++P +HY ++++LGR+G+++ A EF+ ++PVEP A
Sbjct: 522 CSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPA 581
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
+WG L+G C + K D D+A A++RL ELDP + +V L NIY+ + S+R+ +
Sbjct: 582 VWGTLLGACMIHK-DTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVV 640
Query: 352 RIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ + + K+PGC+ I V G HVF SGDR H DI ++
Sbjct: 641 KKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKL 680
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 115/244 (47%), Gaps = 2/244 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +IS Y G V A LF + D IA+ +MISG+ N ++ LF E++ G
Sbjct: 248 TGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGER 307
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ T L +L +HG VK+ + + + ++Y K EID + +
Sbjct: 308 VSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHL 367
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + ++WN+MI G + +G A+++++ M++ P+ VT +L+ACA G +
Sbjct: 368 FDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSL 427
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G + + ++ S L+P +++++ + G + +A + + E N W ++
Sbjct: 428 SFG-KWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIF 485
Query: 299 VCGL 302
GL
Sbjct: 486 GYGL 489
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + ++ Y +V A +FD MP+RD++ W +MI+G V+N ++I LF EM+
Sbjct: 142 NVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMV 201
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
A G + T + A + L G + + +K + + + L+S+Y+KCG+++
Sbjct: 202 ADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVN 261
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT--- 230
+ +F + D I++N+MI G + +G ++ ++ +L G + T +G++
Sbjct: 262 TARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHS 321
Query: 231 -------ACAHAGLVDKGWELFNSMVNS 251
AC+ G K + N V++
Sbjct: 322 PFGHLHLACSIHGFCVKSGIILNPTVST 349
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 27/277 (9%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVA 135
LF S+P D + ++ G+ N+ + +ISL+ + + SP N T+A A +
Sbjct: 66 LFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDK 125
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+L LH + Y ++ + ++LV +Y K + + ++F M RD + WN+MI
Sbjct: 126 HL---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMIN 182
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL + +++ ++ M+ G+ D+ T VL A A + G + L+
Sbjct: 183 GLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMG-----IQCLALK 237
Query: 256 PGF---DHYIS-IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGLSKTDADVA 310
GF D+ ++ +I+L + G V A R+ P+ + A++ G T+ V
Sbjct: 238 IGFGFCDYVLTGLISLYSKCGDVNTARLLFRRIN-RPDLIAYNAMISGFTANGGTECSVK 296
Query: 311 ----------SRATKRLLELDPLNAP-GHVAL-CNIY 335
++ ++ L PL++P GH+ L C+I+
Sbjct: 297 LFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIH 333
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 217/344 (63%), Gaps = 3/344 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S N++I GYVQ G +E+A +LF +PI + ++W +ISG+ G + + + F++MP
Sbjct: 307 DACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP 366
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
++ I+W S+I+GY +NE AI LF +M G P T + + + L G+Q
Sbjct: 367 HKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQ 426
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHG 201
+H KT+ DL + NSL++MY++CGEI D+ +F+ M Y+D I+WN+MI G + HG
Sbjct: 427 IHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 485
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A++AL ++E M + P +TF+ VL ACAHAGLV++G FNSM+N YG++P +H+
Sbjct: 486 FAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHF 545
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
S++++LGR G++++A + ++ +PV+P+ A+WGAL+G C + ++ D+A A K L+ L+
Sbjct: 546 ASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRV-HSNVDLAQVAAKALIRLE 604
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
P ++ + L N+YA + + +R M V+K G SWI
Sbjct: 605 PESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 57/334 (17%)
Query: 11 ASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA-G 69
A+ L + N+ + + NSMI GYVQ ++ KA++LFD +P+R+ ++W +ISGY S G
Sbjct: 56 AARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG 115
Query: 70 QVF--KACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM----------MAHGF 117
F + LFD MP RD ++W ++ISGY +N + +AI +F M + +GF
Sbjct: 116 SRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGF 175
Query: 118 SPLNG---TFAVLFGAMG-----SVAYLDQGRQLHG---MQVKTIYEY--------DLIL 158
LNG + F MG S++ L G +G M + + EY DL+
Sbjct: 176 -LLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVY 234
Query: 159 E-NSLVSMYAKCGEIDDSYRIFSNMA-------------YRDKISWNSMIMGLSDHGRAS 204
N+L++ Y + G ++++ +F + R+ +SWNSM+M G
Sbjct: 235 AYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVV 294
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
A +++ M+E D ++ V+ G +++ +LF M P + SI
Sbjct: 295 SARELFDRMVE----RDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSI 345
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
I+ + G +K +EF +P N W +++
Sbjct: 346 ISGFSQIGDLKRVKEFFENMP-HKNLISWNSVIA 378
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 30/289 (10%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN I+ ++ G+L A+ LFD+ RN + W MI+GY+ ++ KA LFD MP RD
Sbjct: 41 LNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDI 100
Query: 87 IAWTSMISGYVQ---NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
++W +ISGY + + E LF M N + Y GR
Sbjct: 101 VSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVIS---------GYAKNGRMD 151
Query: 144 HGMQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+++ +++ E +++ N++V+ + G++D + F M RD S + ++ GL +G+
Sbjct: 152 QAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGK 211
Query: 203 ASEALTVYETMLEFGLYPD-----TVTFLGVLTACAHAGLVDKGWELFNSMVNSYG---- 253
A E ++E+G D + ++ G+V++ +F+ +++ G
Sbjct: 212 LDMAA---EILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNE 268
Query: 254 ----LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
L+ + S++ +AG V A E R+ VE + W ++G
Sbjct: 269 GKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRM-VERDACSWNTVIG 316
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 217/344 (63%), Gaps = 3/344 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S N++I GYVQ G +E+A +LF +PI + ++W +ISG+ G + + + F++MP
Sbjct: 307 DACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP 366
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
++ I+W S+I+GY +NE AI LF +M G P T + + + L G+Q
Sbjct: 367 HKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQ 426
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHG 201
+H KT+ DL + NSL++MY++CGEI D+ +F+ M Y+D I+WN+MI G + HG
Sbjct: 427 IHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 485
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A++AL ++E M + P +TF+ VL ACAHAGLV++G FNSM+N YG++P +H+
Sbjct: 486 FAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHF 545
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
S++++LGR G++++A + ++ +PV+P+ A+WGAL+G C + ++ D+A A K L+ L+
Sbjct: 546 ASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRV-HSNVDLAQVAAKALIRLE 604
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
P ++ + L N+YA + + +R M V+K G SWI
Sbjct: 605 PESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 57/334 (17%)
Query: 11 ASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA-G 69
A+ L + N+ + + NSMI GYVQ ++ KA++LFD +P+R+ ++W +ISGY S G
Sbjct: 56 AARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG 115
Query: 70 QVF--KACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM----------MAHGF 117
F + LFD MP RD ++W ++ISGY +N + +AI +F M + +GF
Sbjct: 116 SRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGF 175
Query: 118 SPLNG---TFAVLFGAMG-----SVAYLDQGRQLHG---MQVKTIYEY--------DLIL 158
LNG + F MG S++ L G +G M + + EY DL+
Sbjct: 176 -LLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVY 234
Query: 159 E-NSLVSMYAKCGEIDDSYRIFSNMA-------------YRDKISWNSMIMGLSDHGRAS 204
N+L++ Y + G ++++ +F + R+ +SWNSM+M G
Sbjct: 235 AYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVV 294
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
A +++ M+E D ++ V+ G +++ +LF M P + SI
Sbjct: 295 SARELFDRMVE----RDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSI 345
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
I+ + G +K +EF +P N W +++
Sbjct: 346 ISGFSQIGDLKRVKEFFENMP-HKNLISWNSVIA 378
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 30/289 (10%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN I+ ++ G+L A+ LFD+ RN + W MI+GY+ ++ KA LFD MP RD
Sbjct: 41 LNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDI 100
Query: 87 IAWTSMISGYVQ---NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
++W +ISGY + + E LF M N + Y GR
Sbjct: 101 VSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVIS---------GYAKNGRMD 151
Query: 144 HGMQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+++ +++ E +++ N++V+ + G++D + F M RD S + ++ GL +G+
Sbjct: 152 QAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGK 211
Query: 203 ASEALTVYETMLEFGLYPD-----TVTFLGVLTACAHAGLVDKGWELFNSMVNSYG---- 253
A E ++E+G D + ++ G+V++ +F+ +++ G
Sbjct: 212 LDMAA---EILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNE 268
Query: 254 ----LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
L+ + S++ +AG V A E R+ VE + W ++G
Sbjct: 269 GKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRM-VERDACSWNTVIG 316
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 217/344 (63%), Gaps = 3/344 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S N++I GYVQ G +E+A +LF +PI + ++W +ISG+ G + + + F++MP
Sbjct: 307 DACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP 366
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
++ I+W S+I+GY +NE AI LF +M G P T + + + L G+Q
Sbjct: 367 HKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQ 426
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHG 201
+H KT+ DL + NSL++MY++CGEI D+ +F+ M Y+D I+WN+MI G + HG
Sbjct: 427 IHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 485
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A++AL ++E M + P +TF+ VL ACAHAGLV++G FNSM+N YG++P +H+
Sbjct: 486 FAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHF 545
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
S++++LGR G++++A + ++ +PV+P+ A+WGAL+G C + ++ D+A A K L+ L+
Sbjct: 546 ASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRV-HSNVDLAQVAAKALIRLE 604
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
P ++ + L N+YA + + +R M V+K G SWI
Sbjct: 605 PESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 57/334 (17%)
Query: 11 ASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA-G 69
A+ L + N+ + + NSMI GYVQ ++ KA++LFD +P+R+ ++W +ISGY S G
Sbjct: 56 AARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG 115
Query: 70 QVF--KACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM----------MAHGF 117
F + LFD MP RD ++W ++ISGY +N + +AI +F M + +GF
Sbjct: 116 SRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGF 175
Query: 118 SPLNG---TFAVLFGAMG-----SVAYLDQGRQLHG---MQVKTIYEY--------DLIL 158
LNG + F MG S++ L G +G M + + EY DL+
Sbjct: 176 -LLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVY 234
Query: 159 E-NSLVSMYAKCGEIDDSYRIFSNMA-------------YRDKISWNSMIMGLSDHGRAS 204
N+L++ Y + G ++++ +F + R+ +SWNSM+M G
Sbjct: 235 AYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVV 294
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
A +++ M+E D ++ V+ G +++ +LF M P + SI
Sbjct: 295 SARELFDRMVE----RDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSI 345
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
I+ + G +K +EF +P N W +++
Sbjct: 346 ISGFSQIGDLKRVKEFFENMP-HKNLISWNSVIA 378
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 30/289 (10%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN I+ ++ G+L A+ LFD+ RN + W MI+GY+ ++ KA LFD MP RD
Sbjct: 41 LNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDI 100
Query: 87 IAWTSMISGYVQ---NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
++W +ISGY + + E LF M N + Y GR
Sbjct: 101 VSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVIS---------GYAKNGRMD 151
Query: 144 HGMQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+++ +++ E +++ N++V+ + G++D + F M RD S + ++ GL +G+
Sbjct: 152 QAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGK 211
Query: 203 ASEALTVYETMLEFGLYPD-----TVTFLGVLTACAHAGLVDKGWELFNSMVNSYG---- 253
A E ++E+G D + ++ G+V++ +F+ +++ G
Sbjct: 212 LDMAA---EILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNE 268
Query: 254 ----LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
L+ + S++ +AG V A E R+ VE + W ++G
Sbjct: 269 GKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRM-VERDACSWNTVIG 316
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 217/344 (63%), Gaps = 3/344 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S N++I GYVQ G +E+A +LF +PI + ++W +ISG+ G + + + F++MP
Sbjct: 307 DACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP 366
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
++ I+W S+I+GY +NE AI LF +M G P T + + + L G+Q
Sbjct: 367 HKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQ 426
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHG 201
+H KT+ DL + NSL++MY++CGEI D+ +F+ M Y+D I+WN+MI G + HG
Sbjct: 427 IHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 485
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A++AL ++E M + P +TF+ VL ACAHAGLV++G FNSM+N YG++P +H+
Sbjct: 486 FAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHF 545
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
S++++LGR G++++A + ++ +PV+P+ A+WGAL+G C + ++ D+A A K L+ L+
Sbjct: 546 ASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRV-HSNVDLAQVAAKALIRLE 604
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
P ++ + L N+YA + + +R M V+K G SWI
Sbjct: 605 PESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 57/334 (17%)
Query: 11 ASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA-G 69
A+ L + N+ + + NSMI GYVQ ++ KA++LFD +P+R+ ++W +ISGY S G
Sbjct: 56 AARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG 115
Query: 70 QVF--KACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM----------MAHGF 117
F + LFD MP RD ++W ++ISGY +N + +AI +F M + +GF
Sbjct: 116 SRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGF 175
Query: 118 SPLNG---TFAVLFGAMG-----SVAYLDQGRQLHG---MQVKTIYEY--------DLIL 158
LNG + F MG S++ L G +G M + + EY DL+
Sbjct: 176 -LLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVY 234
Query: 159 E-NSLVSMYAKCGEIDDSYRIFSNMA-------------YRDKISWNSMIMGLSDHGRAS 204
N+L++ Y + G ++++ +F + R+ +SWNSM+M G
Sbjct: 235 AYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVV 294
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
A +++ M+E D ++ V+ G +++ +LF M P + SI
Sbjct: 295 SARELFDRMVE----RDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSI 345
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
I+ + G +K +EF +P N W +++
Sbjct: 346 ISGFSQIGDLKRVKEFFENMP-HKNLISWNSVIA 378
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 30/289 (10%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN I+ ++ G+L A+ LFD+ RN + W MI+GY+ ++ KA LFD MP RD
Sbjct: 41 LNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDI 100
Query: 87 IAWTSMISGYVQ---NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
++W +ISGY + + E LF M N + Y GR
Sbjct: 101 VSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVIS---------GYAKNGRMD 151
Query: 144 HGMQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+++ +++ E +++ N++V+ + G++D + F M RD S + ++ GL +G+
Sbjct: 152 QAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGK 211
Query: 203 ASEALTVYETMLEFGLYPD-----TVTFLGVLTACAHAGLVDKGWELFNSMVNSYG---- 253
A E ++E+G D + ++ G+V++ +F+ +++ G
Sbjct: 212 LDMAA---EILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNE 268
Query: 254 ----LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
L+ + S++ +AG V A E R+ VE + W ++G
Sbjct: 269 GKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRM-VERDACSWNTVIG 316
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 212/360 (58%), Gaps = 1/360 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS++ Y +G ++ A LFD +P R+ ++W MI GY+ G V A +F +MP+++ I
Sbjct: 150 NSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVI 209
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+WTSMI G+V+ + EA+ L +M+ G P T + A + L+QG+ +H
Sbjct: 210 SWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYI 269
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K + D +L +L+ MY KCGE+ + +FS + + +W ++I G + HG+ SEAL
Sbjct: 270 GKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEAL 329
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+ M + G+ P + TF VLTAC+H GLV++G LF SM Y ++P +HY +++L
Sbjct: 330 DWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDL 389
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGRAG +K+A+EFV +P++PN AIWG+L+ C L K ++ K L+ELDP +
Sbjct: 390 LGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHK-HLELGKEIGKFLIELDPEHDGR 448
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
++ L +I+AA E + +R ++ KG+ PGCS I + G H F +G PHV ++
Sbjct: 449 YIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPHPHVREM 508
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 38/296 (12%)
Query: 38 GQLEKAQ-ELFDTVPIRNKIAWTCMISGYLSA--GQVFKACDLFDSMPDRDSIAWTSMIS 94
G+L++ +L IR+K+ + +++ Y S + A +FD + +++ W +MI
Sbjct: 25 GELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIR 84
Query: 95 GYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 154
Y + EA+ L+ +M+ H TF L A +++ L + Q+H +K +
Sbjct: 85 AYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGS 144
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN----------------------- 191
++ NSL+ +YA G I ++ +F + RD +SWN
Sbjct: 145 EVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMP 204
Query: 192 --------SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-W 242
SMI+G G EAL + + ML G+ PD +T L+ACA G +++G W
Sbjct: 205 EKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKW 264
Query: 243 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
N + P ++I++ + G++K A +L + + W A++G
Sbjct: 265 IHTYIGKNKIKIDPVLG--CALIDMYVKCGEMKKALLVFSKLEKKCVYT-WTAIIG 317
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 268 bits (684), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 224/363 (61%), Gaps = 4/363 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI GY Q G+ ++A +LF+ +P R+ +W M++G++ G + +A LF +MP ++
Sbjct: 190 SWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKN 249
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
I WT+M++GYVQ+ L EA+ LF +M A+ G P GTF + GA +A L +G+Q+H
Sbjct: 250 VITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIH 309
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN--MAYRDKISWNSMIMGLSDHGR 202
M KT+++ + ++L++MY+KCG+ + ++F + + D I+WN MI + HG
Sbjct: 310 QMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGY 369
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
+EA+ ++ M E G + VT++G+LTAC+HAGL D+G++ F+ ++ + +Q DHY
Sbjct: 370 GNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYMQVREDHYT 429
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+I+L GRAG++ +A + L E + ++WGAL+ C + +AD+ ++L+++P
Sbjct: 430 CLIDLCGRAGRLDEALNIIEGLGKEVSLSVWGALLAGCSVH-GNADIGRLVADKVLKMEP 488
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
NA ++ N+YA+ E ++R +M+ KG++K PGCSWI V V VF D+
Sbjct: 489 ENADTYLLASNMYASVGMREEAANVRMKMKDKGLKKQPGCSWIDVGNTVQVFVVNDKSHS 548
Query: 383 HVE 385
E
Sbjct: 549 QFE 551
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 142/288 (49%), Gaps = 46/288 (15%)
Query: 16 EGNLNN----FDDQS------LNSMINGYVQAGQLEKAQELFDTVPI-RNKIAWTCMISG 64
EG +N FD+ S +MI+GY++ G + +A++LFD + ++ I WT M+SG
Sbjct: 14 EGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSVIVWTAMVSG 73
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ ++ +A LF+ MP R+ ++W +MI GY +N EA+ LFG M N
Sbjct: 74 YIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNVVSWN--- 130
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A+ +D +L + E D++ ++V+ +K G +DD+ +F M
Sbjct: 131 -TVMTALAHCGRIDDAERL----FNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPI 185
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLE-------------------------FGLY 219
R+ +SWN+MI G + +GR EAL ++E M E F
Sbjct: 186 RNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAM 245
Query: 220 P--DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
P + +T+ ++T GL ++ +LFN M + GL+P +++++
Sbjct: 246 PKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVL 293
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 21/275 (7%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM-PD 83
+ N I+ + GQ+ +A+++FD + R+ WT MISGY+ G + +A LFD + +
Sbjct: 2 KRCNYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAE 61
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
+ I WT+M+SGY++ I EA LF EM N Y GR
Sbjct: 62 KSVIVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMID---------GYARNGRTQ 112
Query: 144 HGMQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
M + + E +++ N++++ A CG IDD+ R+F+ M RD +SW +M+ GLS +GR
Sbjct: 113 EAMDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGR 172
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
+A V++ M + V++ ++ A G D+ +LF M + +
Sbjct: 173 VDDARDVFDRM----PIRNVVSWNAMIAGYAQNGRFDEALKLFERMP-----ERDMPSWN 223
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+++ + G + AE+ +P + N W A++
Sbjct: 224 TMVTGFIQNGDLNRAEKLFHAMP-KKNVITWTAMM 257
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 131/249 (52%), Gaps = 12/249 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI+GY + G+ ++A +LF +P RN ++W +++ G++ A LF+ M +RD
Sbjct: 97 SWNTMIDGYARNGRTQEAMDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERD 156
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++WT+M++G +N + +A +F M N A Y GR
Sbjct: 157 VVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNAMIA---------GYAQNGRFDEA 207
Query: 146 MQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+++ + + E D+ N++V+ + + G+++ + ++F M ++ I+W +M+ G HG +
Sbjct: 208 LKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSE 267
Query: 205 EALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
EAL ++ M GL P T TF+ VL AC+ + +G ++ + M++ Q +
Sbjct: 268 EALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQI-HQMISKTVFQESTYVVSA 326
Query: 264 IINLLGRAG 272
+IN+ + G
Sbjct: 327 LINMYSKCG 335
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 208/338 (61%), Gaps = 1/338 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + ++ Y + A +F M ++ ++WT+M+ GY QN EA+ F +M
Sbjct: 309 NIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 368
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+G P + T + + ++A L++G Q H + + + + N+LV++Y KCG I+
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 428
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
DS+R+F+ ++++D+++W +++ G + G+A+E + ++E+ML GL PD VTF+GVL+AC+
Sbjct: 429 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 488
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
AGLV+KG ++F SM+N +G+ P DHY +I+L RAG++++A F+ ++P P+ W
Sbjct: 489 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 548
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
L+ C + D+ A + L+ELDP N +V L ++YAA + E+ LRK+MR
Sbjct: 549 ATLLSSCRFY-GNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRD 607
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
KG+RK PGCSWI K +VHVFS+ D+ P + I ++
Sbjct: 608 KGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSEL 645
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 149/272 (54%), Gaps = 10/272 (3%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+++ Y + G + A+++FD +P +N + + +I G + G+V + LF M +RDSI+W
Sbjct: 184 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 243
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
TSMI+G+ QN L +AI +F EM TF + A G V L +G+Q+H ++
Sbjct: 244 TSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIR 303
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
T Y+ ++ + ++LV MY KC I + +F M ++ +SW +M++G +G + EA+
Sbjct: 304 TDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 363
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN--- 266
+ M ++G+ PD T V+++CA+ +++G + ++ L G +I++ N
Sbjct: 364 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQF-----HARALTSGLISFITVSNALV 418
Query: 267 -LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
L G+ G ++D+ + + + W ALV
Sbjct: 419 TLYGKCGSIEDSHRLFNEISFK-DEVTWTALV 449
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 158/346 (45%), Gaps = 46/346 (13%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN++I+ Y + G + A ++FD +P N +W ++S Y G+V + LFD+MP RD
Sbjct: 47 LNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDG 106
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNG-TFAVLFGAMGSVAYLDQGRQLH 144
++W S+ISGY LI +++ + M+ + G LN TF+ L + GRQ+H
Sbjct: 107 VSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIH 166
Query: 145 GMQVK-------------------------------TIYEYDLILENSLVSMYAKCGEID 173
G VK + E ++++ N+L+ +CG ++
Sbjct: 167 GHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVE 226
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
DS R+F M RD ISW SMI G + +G +A+ ++ M L D TF VLTAC
Sbjct: 227 DSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACG 286
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPN 289
+ +G V++Y ++ + I +++ + + +K AE ++ + N
Sbjct: 287 GVMALQEG-----KQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCK-N 340
Query: 290 HAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 332
W A++ G G S+ S K +E D ++ C
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 386
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 10 YASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG 69
+ + AL L +F S N+++ Y + G +E + LF+ + ++++ WT ++SGY G
Sbjct: 398 FHARALTSGLISFITVS-NALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFG 456
Query: 70 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 129
+ E I LF M+AHG P TF +
Sbjct: 457 KA-------------------------------NETIGLFESMLAHGLKPDKVTFIGVLS 485
Query: 130 AMGSVAYLDQGRQLHGMQVKTIYEYDLIL----ENSLVSMYAKCGEIDDSYRIFSNMAYR 185
A +++G Q+ I E+ ++ ++ ++++ G I+++ + M +
Sbjct: 486 ACSRAGLVEKGNQIFE---SMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS 542
Query: 186 -DKISWNSMIMGLSDHG 201
D ISW +++ +G
Sbjct: 543 PDAISWATLLSSCRFYG 559
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
+ + LH +KT+ + L N+L+S YAK G I + ++F M + + SWN+++ S
Sbjct: 27 KAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYS 86
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
GR SE +++ M D V++ +++ A GL+ + + +N M+ + G
Sbjct: 87 KLGRVSEMEYLFDAMPR----RDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 137
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 208/338 (61%), Gaps = 1/338 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + ++ Y + A +F M ++ ++WT+M+ GY QN EA+ F +M
Sbjct: 309 NIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 368
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+G P + T + + ++A L++G Q H + + + + N+LV++Y KCG I+
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 428
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
DS+R+F+ ++++D+++W +++ G + G+A+E + ++E+ML GL PD VTF+GVL+AC+
Sbjct: 429 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 488
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
AGLV+KG ++F SM+N +G+ P DHY +I+L RAG++++A F+ ++P P+ W
Sbjct: 489 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 548
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
L+ C + D+ A + L+ELDP N +V L ++YAA + E+ LRK+MR
Sbjct: 549 ATLLSSCRFY-GNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRD 607
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
KG+RK PGCSWI K +VHVFS+ D+ P + I ++
Sbjct: 608 KGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSEL 645
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 149/272 (54%), Gaps = 10/272 (3%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+++ Y + G + A+++FD +P +N + + +I G + G+V + LF M +RDSI+W
Sbjct: 184 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 243
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
TSMI+G+ QN L +AI +F EM TF + A G V L +G+Q+H ++
Sbjct: 244 TSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIR 303
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
T Y+ ++ + ++LV MY KC I + +F M ++ +SW +M++G +G + EA+
Sbjct: 304 TDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 363
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN--- 266
+ M ++G+ PD T V+++CA+ +++G + ++ L G +I++ N
Sbjct: 364 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQF-----HARALTSGLISFITVSNALV 418
Query: 267 -LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
L G+ G ++D+ + + + W ALV
Sbjct: 419 TLYGKCGSIEDSHRLFNEISFK-DEVTWTALV 449
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 158/346 (45%), Gaps = 46/346 (13%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN++I+ Y + G + A ++FD +P N +W ++S Y G+V + LFD+MP RD
Sbjct: 47 LNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDG 106
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNG-TFAVLFGAMGSVAYLDQGRQLH 144
++W S+ISGY LI +++ + M+ + G LN TF+ L + GRQ+H
Sbjct: 107 VSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIH 166
Query: 145 GMQVK-------------------------------TIYEYDLILENSLVSMYAKCGEID 173
G VK + E ++++ N+L+ +CG ++
Sbjct: 167 GHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVE 226
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
DS R+F M RD ISW SMI G + +G +A+ ++ M L D TF VLTAC
Sbjct: 227 DSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACG 286
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPN 289
+ +G V++Y ++ + I +++ + + +K AE ++ + N
Sbjct: 287 GVMALQEG-----KQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCK-N 340
Query: 290 HAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 332
W A++ G G S+ S K +E D ++ C
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 386
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 10 YASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG 69
+ + AL L +F S N+++ Y + G +E + LF+ + ++++ WT ++SGY G
Sbjct: 398 FHARALTSGLISFITVS-NALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFG 456
Query: 70 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 129
+ E I LF M+AHG P TF +
Sbjct: 457 KA-------------------------------NETIGLFESMLAHGLKPDKVTFIGVLS 485
Query: 130 AMGSVAYLDQGRQLHGMQVKTIYEYDLIL----ENSLVSMYAKCGEIDDSYRIFSNMAYR 185
A +++G Q+ I E+ ++ ++ ++++ G I+++ + M +
Sbjct: 486 ACSRAGLVEKGNQIFE---SMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS 542
Query: 186 -DKISWNSMIMGLSDHG 201
D ISW +++ +G
Sbjct: 543 PDAISWATLLSSCRFYG 559
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
+ + LH +KT+ + L N+L+S YAK G I + ++F M + + SWN+++ S
Sbjct: 27 KAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYS 86
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
GR SE +++ M D V++ +++ A GL+ + + +N M+ + G
Sbjct: 87 KLGRVSEMEYLFDAMPR----RDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 137
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 208/338 (61%), Gaps = 1/338 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + ++ Y + A +F M ++ ++WT+M+ GY QN EA+ F +M
Sbjct: 318 NIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 377
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+G P + T + + ++A L++G Q H + + + + N+LV++Y KCG I+
Sbjct: 378 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 437
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
DS+R+F+ ++++D+++W +++ G + G+A+E + ++E+ML GL PD VTF+GVL+AC+
Sbjct: 438 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 497
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
AGLV+KG ++F SM+N +G+ P DHY +I+L RAG++++A F+ ++P P+ W
Sbjct: 498 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 557
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
L+ C + D+ A + L+ELDP N +V L ++YAA + E+ LRK+MR
Sbjct: 558 ATLLSSCRFY-GNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRD 616
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
KG+RK PGCSWI K +VHVFS+ D+ P + I ++
Sbjct: 617 KGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSEL 654
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 149/272 (54%), Gaps = 10/272 (3%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+++ Y + G + A+++FD +P +N + + +I G + G+V + LF M +RDSI+W
Sbjct: 193 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 252
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
TSMI+G+ QN L +AI +F EM TF + A G V L +G+Q+H ++
Sbjct: 253 TSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIR 312
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
T Y+ ++ + ++LV MY KC I + +F M ++ +SW +M++G +G + EA+
Sbjct: 313 TDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 372
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN--- 266
+ M ++G+ PD T V+++CA+ +++G + ++ L G +I++ N
Sbjct: 373 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQF-----HARALTSGLISFITVSNALV 427
Query: 267 -LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
L G+ G ++D+ + + + W ALV
Sbjct: 428 TLYGKCGSIEDSHRLFNEISFK-DEVTWTALV 458
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 157/346 (45%), Gaps = 46/346 (13%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN++I+ Y + G + A ++FD +P N +W ++S Y G+V + LFD+MP RD
Sbjct: 56 LNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDG 115
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAH--GFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
++W S+ISGY LI +++ + M+ + F+ TF+ L + GRQ+H
Sbjct: 116 VSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIH 175
Query: 145 GMQVK-------------------------------TIYEYDLILENSLVSMYAKCGEID 173
G VK + E ++++ N+L+ +CG ++
Sbjct: 176 GHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVE 235
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
DS R+F M RD ISW SMI G + +G +A+ ++ M L D TF VLTAC
Sbjct: 236 DSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACG 295
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPN 289
+ +G V++Y ++ + I +++ + + +K AE ++ + N
Sbjct: 296 CVMALQEG-----KQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCK-N 349
Query: 290 HAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 332
W A++ G G S+ S K +E D ++ C
Sbjct: 350 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 395
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 10 YASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG 69
+ + AL L +F S N+++ Y + G +E + LF+ + ++++ WT ++SGY G
Sbjct: 407 FHARALTSGLISFITVS-NALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFG 465
Query: 70 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 129
+ E I LF M+AHG P TF +
Sbjct: 466 KA-------------------------------NETIGLFESMLAHGLKPDKVTFIGVLS 494
Query: 130 AMGSVAYLDQGRQLHGMQVKTIYEYDLIL----ENSLVSMYAKCGEIDDSYRIFSNMAYR 185
A +++G Q+ I E+ ++ ++ ++++ G I+++ + M +
Sbjct: 495 ACSRAGLVEKGNQIFE---SMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS 551
Query: 186 -DKISWNSMIMGLSDHG 201
D ISW +++ +G
Sbjct: 552 PDAISWATLLSSCRFYG 568
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
+ + LH +KT+ + L N+L+S YAK G I + ++F M + + SWN+++ S
Sbjct: 36 KAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYS 95
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
GR SE +++ M D V++ +++ A GL+ + + +N M+ + G
Sbjct: 96 KLGRVSEMEYLFDAMPR----RDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 146
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 208/338 (61%), Gaps = 1/338 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + ++ Y + A +F M ++ ++WT+M+ GY QN EA+ F +M
Sbjct: 318 NIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 377
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+G P + T + + ++A L++G Q H + + + + N+LV++Y KCG I+
Sbjct: 378 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 437
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
DS+R+F+ ++++D+++W +++ G + G+A+E + ++E+ML GL PD VTF+GVL+AC+
Sbjct: 438 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 497
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
AGLV+KG ++F SM+N +G+ P DHY +I+L RAG++++A F+ ++P P+ W
Sbjct: 498 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 557
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
L+ C + D+ A + L+ELDP N +V L ++YAA + E+ LRK+MR
Sbjct: 558 ATLLSSCRFY-GNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRD 616
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
KG+RK PGCSWI K +VHVFS+ D+ P + I ++
Sbjct: 617 KGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSEL 654
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 149/272 (54%), Gaps = 10/272 (3%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+++ Y + G + A+++FD +P +N + + +I G + G+V + LF M +RDSI+W
Sbjct: 193 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 252
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
TSMI+G+ QN L +AI +F EM TF + A G V L +G+Q+H ++
Sbjct: 253 TSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIR 312
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
T Y+ ++ + ++LV MY KC I + +F M ++ +SW +M++G +G + EA+
Sbjct: 313 TDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 372
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN--- 266
+ M ++G+ PD T V+++CA+ +++G + ++ L G +I++ N
Sbjct: 373 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQF-----HARALTSGLISFITVSNALV 427
Query: 267 -LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
L G+ G ++D+ + + + W ALV
Sbjct: 428 TLYGKCGSIEDSHRLFNEISFK-DEVTWTALV 458
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 157/346 (45%), Gaps = 46/346 (13%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN++I+ Y + G + A ++FD +P N +W ++S Y G+V + LFD+MP RD
Sbjct: 56 LNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDG 115
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAH--GFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
++W S+ISGY LI +++ + M+ + F+ TF+ L + GRQ+H
Sbjct: 116 VSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIH 175
Query: 145 GMQVK-------------------------------TIYEYDLILENSLVSMYAKCGEID 173
G VK + E ++++ N+L+ +CG ++
Sbjct: 176 GHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVE 235
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
DS R+F M RD ISW SMI G + +G +A+ ++ M L D TF VLTAC
Sbjct: 236 DSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACG 295
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPN 289
+ +G V++Y ++ + I +++ + + +K AE ++ + N
Sbjct: 296 CVMALQEG-----KQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCK-N 349
Query: 290 HAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 332
W A++ G G S+ S K +E D ++ C
Sbjct: 350 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 395
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 10 YASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG 69
+ + AL L +F S N+++ Y + G +E + LF+ + ++++ WT ++SGY G
Sbjct: 407 FHARALTSGLISFITVS-NALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFG 465
Query: 70 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 129
+ E I LF M+AHG P TF +
Sbjct: 466 KA-------------------------------NETIGLFESMLAHGLKPDKVTFIGVLS 494
Query: 130 AMGSVAYLDQGRQLHGMQVKTIYEYDLIL----ENSLVSMYAKCGEIDDSYRIFSNMAYR 185
A +++G Q+ I E+ ++ ++ ++++ G I+++ + M +
Sbjct: 495 ACSRAGLVEKGNQIFE---SMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS 551
Query: 186 -DKISWNSMIMGLSDHG 201
D ISW +++ +G
Sbjct: 552 PDAISWATLLSSCRFYG 568
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
+ + LH +KT+ + L N+L+S YAK G I + ++F M + + SWN+++ S
Sbjct: 36 KAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYS 95
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
GR SE +++ M D V++ +++ A GL+ + + +N M+ + G
Sbjct: 96 KLGRVSEMEYLFDAMPR----RDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 146
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 210/359 (58%), Gaps = 2/359 (0%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+I+GY+++ + A+ELFD +P R+ ++W M++GY G+V +FD MP+R+ +W
Sbjct: 213 LISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSW 272
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
+I GYV+N L +E + F M+ G P + T + A + LD G+ +H
Sbjct: 273 NGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAE 332
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
Y+ +L + N L+ MYAKCG I+++ +F+ + +D ISWN++I GL+ HG A +AL
Sbjct: 333 SIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALG 392
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+++ M G PD VTF+G+L+AC H GLV G+ F SMV+ Y + P +HY +++LL
Sbjct: 393 MFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLL 452
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGH 328
GRAG + A F+ ++P+EP+ IW AL+G C L K + ++A A +RL+EL+P N
Sbjct: 453 GRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYK-NVEIAELALQRLIELEPNNPANF 511
Query: 329 VALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
V + NIY R ++ L+ MR G RK PGCS I V F S D E I
Sbjct: 512 VMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESI 570
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Query: 70 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 129
++ A LFD +P ++ W +M GY+QN + + LFGE+ P TF ++
Sbjct: 59 RIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIK 118
Query: 130 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS 189
+ G + + +G ++H K ++ + + SL+ MY+K G ++D+Y++F M R+ +
Sbjct: 119 SCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVV 178
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
W ++I G G +++ E D V + +++ + + ELF+ M
Sbjct: 179 WTAIINGYILCGDVVSGRRLFDLAPE----RDVVMWSVLISGYIESKNMAAARELFDKMP 234
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
N + + +++N G+V+ E+ +P E N W L+G
Sbjct: 235 NRDTMS-----WNAMLNGYAVNGEVEMFEKVFDEMP-ERNVFSWNGLIG 277
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N T +I Y G V A +F M +R+ + WT++I+GY+ + LF
Sbjct: 144 NSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLF---- 199
Query: 114 AHGFSPLNGT--FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
+P ++VL + R+L + D + N++++ YA GE
Sbjct: 200 --DLAPERDVVMWSVLISGYIESKNMAAAREL----FDKMPNRDTMSWNAMLNGYAVNGE 253
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLT 230
++ ++F M R+ SWN +I G +G SE L ++ ML G + P+ T + VL+
Sbjct: 254 VEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLS 313
Query: 231 ACAHAGLVDKG 241
AC+ G +D G
Sbjct: 314 ACSRLGALDMG 324
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 225/368 (61%), Gaps = 14/368 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I+ YV+ G L+ A+++FD +P R+ + WT +I Y +G + AC+LF +P +D +
Sbjct: 148 NTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMV 207
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
AWTSM++GY QN + +A+ F +M G T L GA+ + A L G +
Sbjct: 208 AWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEIT---LVGAISACAQL--GVSGYADW 262
Query: 148 VKTIYEY-------DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
++ I E ++ + ++L+ MY+KCG ++++Y +F M + S++SMI+G + H
Sbjct: 263 IREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVH 322
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
GRA A+ ++ MLE G+ P+ VTF+G+ TAC+HAG+V++G +LF +M YG+ P DH
Sbjct: 323 GRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADH 382
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y + +LLGRAG ++ A + V +P+EPN +WGAL+G + + DVA A++ L EL
Sbjct: 383 YACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHI-HGNPDVAEIASRSLFEL 441
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK-GRVHVFSSGDR 379
+P N ++ L YA + +++ +RK MR K +RK PGCSW+ K G +H F +GD
Sbjct: 442 EPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDV 501
Query: 380 LEPHVEDI 387
P + +I
Sbjct: 502 KHPEINEI 509
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 37/234 (15%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF + + ++++I Y +N +I L+ M+ + SP++ TF+ LF + + +
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL 127
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----------- 185
G QLH + DL + N+++ MY K G +D + ++F M +R
Sbjct: 128 ---GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVA 184
Query: 186 --------------------DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
D ++W SM+ G S + +AL + M E G+ D +T
Sbjct: 185 YARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITL 244
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDA 277
+G ++ACA G V + + S G + ++ ++I++ + G V++A
Sbjct: 245 VGAISACAQLG-VSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEA 297
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 213/360 (59%), Gaps = 1/360 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I+ Y G++ AQ++F + + ++W MISGYL G V A LFDSM ++D +
Sbjct: 347 NALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVV 406
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W++MISGY Q+ +EA++LF EM G P + A +A LD G+ +H
Sbjct: 407 SWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYI 466
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K + ++IL +LV MY KCG ++++ +F M + +WN++I+GL+ +G ++L
Sbjct: 467 SKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNALILGLAMNGLVEKSL 526
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
V+ M + P+ +TF+GVL AC H GLVD+G F+SM + ++P HY +++L
Sbjct: 527 NVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDL 586
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGRAG +K+AEE + +P+ P+ A WGAL+G C + ++ R ++L++L P +
Sbjct: 587 LGRAGLLKEAEELIESMPMAPDVATWGALLGACR-KHHNNEMGERLGRKLIQLQPDHDGF 645
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
HV L NIYA+ ++ +R M GV K PGCS I G VH F +GD+ P ++DI
Sbjct: 646 HVLLSNIYASKGNWGDVLEIRGIMAQHGVVKMPGCSMIEANGIVHEFLAGDKTHPQIKDI 705
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 193/410 (47%), Gaps = 64/410 (15%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
+Y+V G M A + ++ D S N+++ GYV G + +A+ ++D +P+RN IA
Sbjct: 189 LYAVCGNMVSAHKVFKESVV-LDLVSWNTLLAGYVNLGDVVEAECVYDKMPVRNTIASNS 247
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
MI + G + KA LFD + +D ++W++MIS Y QN + EA+ LF +M A+G
Sbjct: 248 MIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVD 307
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
A S++ + GR +HG+ K + + L+N+L+ +Y+ CGEI D+ +IFS
Sbjct: 308 EVVVVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFS 367
Query: 181 NMAYRDKISWNS-------------------------------MIMGLSDHGRASEALTV 209
D +SWNS MI G + HG SEA+ +
Sbjct: 368 GGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVAL 427
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SII 265
++ M G+ PD + V++AC H +D G +++Y + F+ + +++
Sbjct: 428 FQEMQLLGIRPDETAIVSVISACTHMAALDLG-----KWIHAYISKNEFNVNVILGTTLV 482
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSKTDADVAS--RATKRLLEL 320
++ + G V++A E + E + W AL+ + GL + +V + + TK L
Sbjct: 483 DMYMKCGCVENALEVFYAME-EKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTL--- 538
Query: 321 DPLNAPGHVALCNIYAANDRHIEL--------TSLRKEMRIKGVRKAPGC 362
P + + A RH+ L +S+ +E +I+ K GC
Sbjct: 539 -----PNEITFMGVLGAC-RHMGLVDEGRRYFSSMTQEHKIEPNVKHYGC 582
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+F+ + + ++ W +++ +++ + +A++ + + SP + T+ +L + +
Sbjct: 100 IFNHLHNPNTFIWNTIMRSHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSCTARV 159
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+G+Q+H VK ++ D+ + N+L+++YA CG + ++++F D +SWN+++
Sbjct: 160 SEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLA 219
Query: 196 GLSDHGRASEALTVYETM 213
G + G EA VY+ M
Sbjct: 220 GYVNLGDVVEAECVYDKM 237
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 211/361 (58%), Gaps = 2/361 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ YV+ L A+ELFD + ++ +WT M++GY G + A FD P ++++
Sbjct: 284 NALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV 343
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG-M 146
W++MI+GY QN E++ LF EMM G P+ T + A G + L+ G +H
Sbjct: 344 CWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYF 403
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
V I + LEN++V MYAKCG ID + +FS M R+ ISWN+MI G + +GRA +A
Sbjct: 404 VVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQA 463
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ V++ M G P+ +TF+ +LTAC+H GL+ +G E F++M YG++P HY +++
Sbjct: 464 INVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVD 523
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 326
LLGR G +++A + + +P++P A WGAL+ C + + ++A + LL LDP ++
Sbjct: 524 LLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRM-HGNVELARLSAHNLLRLDPEDSG 582
Query: 327 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVED 386
+V L N A + + ++ +R M+ KGV+K PG S I + G F D P E+
Sbjct: 583 IYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEE 642
Query: 387 I 387
I
Sbjct: 643 I 643
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 32/269 (11%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A +FD D+D + WT+MI GY ++ EA+ +F M+ P
Sbjct: 185 LIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPN 244
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM--------------- 165
T + A + L+ G+++H + L L N+L+ M
Sbjct: 245 EVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFD 304
Query: 166 ----------------YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
YAKCG+++ + R F ++ + W++MI G S + + E+L +
Sbjct: 305 RMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKL 364
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 269
+ M+E G+ P T + VL+AC ++ G + V + +I+++
Sbjct: 365 FHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYA 424
Query: 270 RAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ G + A E +P E N W ++
Sbjct: 425 KCGSIDAATEVFSTMP-ERNLISWNTMIA 452
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 146/307 (47%), Gaps = 12/307 (3%)
Query: 51 PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG 110
P+ IA+ C ++ +G + A +F+ + ++ W +MI GY A S F
Sbjct: 78 PVSRVIAF-CALA---HSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFV 133
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
M + +F A + +G ++ + K ++ +L++ N L+ YA+ G
Sbjct: 134 YMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERG 193
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+ ++ ++F + +D ++W +MI G + H + EA+ V+E ML + P+ VT + V++
Sbjct: 194 LLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVS 253
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
AC+ G ++ G + + V ++ + +++++ + + DA E R+ + +
Sbjct: 254 ACSDMGNLEMG-KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVY 312
Query: 291 AIWGALVGVCGLSKTDADVASRATKRLLELDPL-NAPGHVALCNIYAANDRHIELTSLRK 349
+ W ++V G +K D+ S +R + P NA A+ Y+ N++ E L
Sbjct: 313 S-WTSMVN--GYAKC-GDLES--ARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 366
Query: 350 EMRIKGV 356
EM +GV
Sbjct: 367 EMMERGV 373
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 211/361 (58%), Gaps = 2/361 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ YV+ L A+ELFD + ++ +WT M++GY G + A FD P ++++
Sbjct: 234 NALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV 293
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG-M 146
W++MI+GY QN E++ LF EMM G P+ T + A G + L+ G +H
Sbjct: 294 CWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYF 353
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
V I + LEN++V MYAKCG ID + +FS M R+ ISWN+MI G + +GRA +A
Sbjct: 354 VVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQA 413
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ V++ M G P+ +TF+ +LTAC+H GL+ +G E F++M YG++P HY +++
Sbjct: 414 INVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVD 473
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 326
LLGR G +++A + + +P++P A WGAL+ C + + ++A + LL LDP ++
Sbjct: 474 LLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRM-HGNVELARLSAHNLLRLDPEDSG 532
Query: 327 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVED 386
+V L N A + + ++ +R M+ KGV+K PG S I + G F D P E+
Sbjct: 533 IYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEE 592
Query: 387 I 387
I
Sbjct: 593 I 593
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 32/269 (11%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A +FD D+D + WT+MI GY ++ EA+ +F M+ P
Sbjct: 135 LIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPN 194
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM--------------- 165
T + A + L+ G+++H + L L N+L+ M
Sbjct: 195 EVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFD 254
Query: 166 ----------------YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
YAKCG+++ + R F ++ + W++MI G S + + E+L +
Sbjct: 255 RMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKL 314
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 269
+ M+E G+ P T + VL+AC ++ G + V + +I+++
Sbjct: 315 FHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYA 374
Query: 270 RAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ G + A E +P E N W ++
Sbjct: 375 KCGSIDAATEVFSTMP-ERNLISWNTMIA 402
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 146/307 (47%), Gaps = 12/307 (3%)
Query: 51 PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG 110
P+ IA+ C ++ +G + A +F+ + ++ W +MI GY A S F
Sbjct: 28 PVSRVIAF-CALA---HSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFV 83
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
M + +F A + +G ++ + K ++ +L++ N L+ YA+ G
Sbjct: 84 YMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERG 143
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+ ++ ++F + +D ++W +MI G + H + EA+ V+E ML + P+ VT + V++
Sbjct: 144 LLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVS 203
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
AC+ G ++ G + + V ++ + +++++ + + DA E R+ + +
Sbjct: 204 ACSDMGNLEMG-KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVY 262
Query: 291 AIWGALVGVCGLSKTDADVASRATKRLLELDPL-NAPGHVALCNIYAANDRHIELTSLRK 349
+ W ++V G +K D+ S +R + P NA A+ Y+ N++ E L
Sbjct: 263 S-WTSMVN--GYAKC-GDLES--ARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 316
Query: 350 EMRIKGV 356
EM +GV
Sbjct: 317 EMMERGV 323
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 214/340 (62%), Gaps = 3/340 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S N++I GYVQ G +E+A +LF +PI + ++W +ISG+ G + + + F++MP
Sbjct: 233 DACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP 292
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
++ I+W S+I+GY +NE AI LF +M G P T + + + L G+Q
Sbjct: 293 HKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQ 352
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHG 201
+H KT+ DL + NSL++MY++CGEI D+ +F+ M Y+D I+WN+MI G + HG
Sbjct: 353 IHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 411
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A++AL ++E M + P +TF+ VL ACAHAGLV++G FNSM+N YG++P +H+
Sbjct: 412 FAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHF 471
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
S++++LGR G++++A + ++ +PV+P+ A+WGAL+G C + ++ D+A A K L+ L+
Sbjct: 472 ASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRV-HSNVDLAQVAAKALIRLE 530
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 361
P ++ + L N+YA + + +R M V+K G
Sbjct: 531 PESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAG 570
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 57/314 (18%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA-GQVF--KACDLFDSMPDRDS 86
MI GYVQ ++ KA++LFD +P+R+ ++W +ISGY S G F + LFD MP RD
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDC 60
Query: 87 IAWTSMISGYVQNELIAEAISLFGEM----------MAHGFSPLNG---TFAVLFGAMG- 132
++W ++ISGY +N + +AI +F M + +GF LNG + F MG
Sbjct: 61 VSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGF-LLNGDVDSAVGFFRKMGE 119
Query: 133 ----SVAYLDQGRQLHG---MQVKTIYEY--------DLILE-NSLVSMYAKCGEIDDSY 176
S++ L G +G M + + EY DL+ N+L++ Y + G ++++
Sbjct: 120 RDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEAR 179
Query: 177 RIFSNMA-------------YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
+F + R+ +SWNSM+M G A +++ M+E D
Sbjct: 180 HVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVE----RDAC 235
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 283
++ V+ G +++ +LF M P + SII+ + G +K +EF
Sbjct: 236 SWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFSQIGDLKRVKEFFEN 290
Query: 284 LPVEPNHAIWGALV 297
+P N W +++
Sbjct: 291 MP-HKNLISWNSVI 303
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 37/253 (14%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
Y+ G MD A E ++ + S N+++NG++ G ++ A F + R+ + + +
Sbjct: 70 YAKNGRMDQAIEIFE-SMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGL 128
Query: 62 ISGYLSAGQVFKACDLF----DSMPDRDSI--AWTSMISGYVQNELIAEAISLFGEMMAH 115
+SG + G++ A ++ + ++D + A+ ++I+GY Q ++ EA +F +M+
Sbjct: 129 VSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMS- 187
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
DQG G + K + +++ NS++ Y K G++ +
Sbjct: 188 ----------------------DQG---EGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSA 222
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+F M RD SWN++I G G EA ++ LE + PD +++ +++ +
Sbjct: 223 RELFDRMVERDACSWNTVIGGYVQIGDMEEASKLF---LEMPI-PDVLSWNSIISGFSQI 278
Query: 236 GLVDKGWELFNSM 248
G + + E F +M
Sbjct: 279 GDLKRVKEFFENM 291
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 238/428 (55%), Gaps = 39/428 (9%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN------ 54
MY+ G + A N LE + + D S NS++ G+V+ G E+A LF + RN
Sbjct: 280 MYAKCGDLKNAKNMLE-TMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDY 338
Query: 55 -------------------------------KIAWTCMISGYLSAGQVFKACDLFDSMPD 83
K+ ++ Y G + A +F+ M +
Sbjct: 339 TFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLE 398
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
+D I+WTS+++GY QN E++ +F +M G +P A + A + L+ G+Q+
Sbjct: 399 KDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQV 458
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H +K+ + + NSLV+MYAKCG +DD+ IF +M +D I+W ++I+G + +G+
Sbjct: 459 HLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKG 518
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+L Y+ M+ G PD +TF+G+L AC+HAGLVD+G + F M YG++PG +HY
Sbjct: 519 RNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYAC 578
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+I+L GR+GK+ +A++ + ++ V+P+ +W +L+ C + + + ++A RA L EL+P+
Sbjct: 579 MIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHE-NLELAERAATNLFELEPM 637
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
NA +V L N+Y+A+ + ++ +RK M+ KG+ K PGCSW+ + RV+ F S DR P
Sbjct: 638 NAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPR 697
Query: 384 VEDILLQI 391
+I +I
Sbjct: 698 EAEIYTKI 705
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 160/324 (49%), Gaps = 15/324 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N ++N ++GQ+ A++LFD +P +++ +W MIS Y++ G++ +A +LFD + SI
Sbjct: 40 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 99
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W+S+ISGY + EA LF M G+ T + S+ + G +HG
Sbjct: 100 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 159
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY--RDKISWNSMIMGLSDHGRASE 205
VK +E ++ + LV MYAKC + ++ +F + + ++ + W +M+ G + +G +
Sbjct: 160 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 219
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--- 262
A+ + M G+ + TF +LTAC+ F V+ + ++ GF +
Sbjct: 220 AVEFFRYMHAQGVECNQYTFPTILTACSSVLA-----RCFGEQVHGFIVKSGFGSNVYVQ 274
Query: 263 -SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL-VGVC--GLSKTDADVASRATKRLL 318
+++++ + G +K+A+ +L + + W +L VG GL + + R +
Sbjct: 275 SALVDMYAKCGDLKNAKN-MLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNM 333
Query: 319 ELDPLNAPGHVALCNIYAANDRHI 342
++D P + C + + N + +
Sbjct: 334 KIDDYTFPSVLNCCVVGSINPKSV 357
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 196/314 (62%), Gaps = 4/314 (1%)
Query: 77 LFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSV 134
+F M +R D ++W SMISGY+ + ++ +A+ L MM G L+G TFA + A SV
Sbjct: 599 IFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRG-QKLDGFTFATVLSACASV 657
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
A L++G ++H V+ E D+++ ++LV MYAKCG+ID + R F M R+ SWNSMI
Sbjct: 658 ATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMI 717
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G + HG +AL ++ M + G PD VTF+GVL+AC+H GLVD+G++ F SM YGL
Sbjct: 718 SGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGL 777
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK-TDADVASRA 313
P +H+ +++LLGRAG VK E+F+ +P++PN IW ++G C + + ++ RA
Sbjct: 778 SPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRA 837
Query: 314 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHV 373
K L+EL+P NA +V L N++AA ++ R MR V+K GCSW+ +K VH+
Sbjct: 838 AKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHL 897
Query: 374 FSSGDRLEPHVEDI 387
F +GD+ P E I
Sbjct: 898 FVAGDQTHPEKEKI 911
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 165/340 (48%), Gaps = 14/340 (4%)
Query: 18 NLNNFDDQSLNSMINGYVQAGQLE----KAQE----LFDTVPIRNKIAW-TCMISGYLSA 68
+L + +SL +++ + + L+ K QE LF + + +I+ +++ Y
Sbjct: 328 DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKC 387
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
+ AC +F MP +D+++W SMISG NE EA+S F M +G P N +
Sbjct: 388 TAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTL 447
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
+ S+ +L GRQ+HG K + D+ + N+L+++YA+ I++ ++F M D++
Sbjct: 448 SSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQV 507
Query: 189 SWNSMIMGLSDH-GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
SWNS I L+ + +AL + M++ G P+ VTF+ +L A + ++ G ++ ++
Sbjct: 508 SWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQI-HA 566
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG---VCGLSK 304
++ Y + +++ G+ +++D E R+ + W +++ G+
Sbjct: 567 LILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILH 626
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 344
D+ +R +LD ++ C A +R +E+
Sbjct: 627 KAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEV 666
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 31/348 (8%)
Query: 25 QSLNSMINGYVQAGQLEKAQ----ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
Q L+S + Y + L A +L+ T + +I+ Y+ G + A LFD
Sbjct: 24 QQLDSEFDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDE 83
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN---GTFAVLFGAMGSVAYL 137
MP ++ ++W+ +ISGY QN + EA SLF +++ G P + G+ GS +
Sbjct: 84 MPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTG-I 142
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKC-GEIDDSYRIFSNMAYRDKISWNSMIMG 196
G Q+H K D+IL N L+SMY+ C G IDD++R+F + +R+ ++WNS+I
Sbjct: 143 KLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISV 202
Query: 197 LSDHGRASEALTVYETM----LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
G A A ++ M +E L P+ T ++TA L D G L M+
Sbjct: 203 YCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAA--CSLADCGLVLLEQMLTRI 260
Query: 253 GLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT-DA 307
+ GF D Y+ +++N R G + D + + + + N L + GL++
Sbjct: 261 E-KSGFLRDLYVGSALVNGFARYG-LMDCAKMIFKQMYDRNAVTMNGL--MVGLARQHQG 316
Query: 308 DVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
+ A++ K + +L +N+ V L + + E ++L KE + KG
Sbjct: 317 EEAAKVFKEMKDLVEINSESLVVLLSTFT------EFSNL-KEGKRKG 357
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 139/297 (46%), Gaps = 22/297 (7%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
+R+ + +++G+ G + A +F M DR+++ ++ G + EA +F E
Sbjct: 266 LRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKE 325
Query: 112 MMAHGFSPLNG-TFAVLFGAMGSVAYLDQGR----QLHGMQVKT-IYEYDLILENSLVSM 165
M +N + VL + L +G+ ++H ++ + + + + N+LV+M
Sbjct: 326 M--KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNM 383
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
Y KC ID++ +F M +D +SWNSMI GL + R EA++ + TM G+ P +
Sbjct: 384 YGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSV 443
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDAEEFV 281
+ L++C+ GW ++ G + G D +S+ N L + + ++
Sbjct: 444 ISTLSSCSSL-----GWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVF 498
Query: 282 LRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN-APGHVALCNIYAA 337
++P E + W + +G L+K +A V +A K LE+ P V NI AA
Sbjct: 499 FQMP-EYDQVSWNSFIG--ALAKYEASVL-QALKYFLEMMQAGWRPNRVTFINILAA 551
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 42/191 (21%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQEL---------------FDTV----------------- 50
D+ S NSMI+GY+ +G L KA +L F TV
Sbjct: 608 DEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVH 667
Query: 51 --PIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 103
+R + + + ++ Y G++ A F+ MP R+ +W SMISGY ++
Sbjct: 668 ACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQ 727
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--S 161
+A+ +F M HG SP + TF + A V +D+G + H + +Y +E+
Sbjct: 728 KALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYK-HFKSMGEVYGLSPRIEHFSC 786
Query: 162 LVSMYAKCGEI 172
+V + + G++
Sbjct: 787 MVDLLGRAGDV 797
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 215/364 (59%), Gaps = 1/364 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I Y + G +KA +F +P+RN I+WT MI+ + +G + KA FD MP+R+ +
Sbjct: 418 NAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIV 477
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W SM+S YVQN E + L+ M ++G P TF A +A + G Q+
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHA 537
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K ++ + NS+V+MY++CG I ++ F ++ +D ISWN+M+ + +G + +
Sbjct: 538 TKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVI 597
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+E ML+ P+ ++++ VL+ C+H GLV +G F+SM +G+ P +H+ +++L
Sbjct: 598 DTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDL 657
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGRAG ++ A++ + +P +PN +W AL+G C + D +A A K+L+ELD + G
Sbjct: 658 LGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHH-DLRLAETAAKKLMELDVEGSEG 716
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+V L N+Y+ + + +RK M++KG+R + GCSWI V RVHVF+ + P ++++
Sbjct: 717 YVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEV 776
Query: 388 LLQI 391
L++
Sbjct: 777 YLKL 780
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS++ YV+ G ++ A+ +F + + W MI GY +KA +F+ MP+RD +
Sbjct: 185 NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEV 244
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W ++IS + Q+ + +++F EM GFSP T+ + A S + L G LH
Sbjct: 245 SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI 304
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
++ + DL+ N L+ MYAKCG +D + R+F ++ D ISWNS+I G+ G +AL
Sbjct: 305 LRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDAL 364
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++ M + D +L C+ G EL + G+ +II +
Sbjct: 365 ILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG-ELLHGYTIKSGMGSSAPVGNAIITM 423
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ G D + V RL N W A++
Sbjct: 424 YAKCGDT-DKADLVFRLMPLRNTISWTAMI 452
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 152/343 (44%), Gaps = 48/343 (13%)
Query: 34 YVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--DSIAWTS 91
Y G A ++F RN W MI +S+ ++ A LFD MP R DS++WT+
Sbjct: 53 YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTT 112
Query: 92 MISGYVQNELIAEAISLFGEMM------AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
MISGY QN + + F M+ + P +F + A GS+ QLH
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPF--SFTSVMKACGSLGDSRLAIQLHA 170
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEID-------------------------------D 174
+ K + + ++NS+V MY KCG++D
Sbjct: 171 LVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYK 230
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
+ +IF+ M RD++SWN++I S HG + L ++ M G P+ +T+ VL+ACA
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 235 AGLVDKGWELFNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+ G L ++ + L F + +I++ + G + D + V + E +H W
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGN--GLIDMYAKCGCL-DLAKRVFKSLREHDHISW 347
Query: 294 GALV-GVC--GLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
+L+ GV GL + + ++ + + LD P + +C+
Sbjct: 348 NSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCS 390
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 32/249 (12%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A +F S+ + D I+W S+I+G V L +A+ LF +M
Sbjct: 319 LIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLD 378
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ G Y G LHG +K+ + N++++MYAKCG+ D + +F
Sbjct: 379 EFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFR 438
Query: 181 NMAYRDKISWNSMIMGLS-------------------------------DHGRASEALTV 209
M R+ ISW +MI S +G + E L +
Sbjct: 439 LMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKL 498
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 269
Y +M G+ PD +TF + ACA +V G ++ + +GL SI+ +
Sbjct: 499 YVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVV-THATKFGLSLNVSVANSIVTMYS 557
Query: 270 RAGKVKDAE 278
R G +K+A+
Sbjct: 558 RCGLIKEAK 566
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 202/329 (61%), Gaps = 3/329 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ +I Y G++ +A +F M DS+ W S+I+ + Q+ EA++L+ M GF
Sbjct: 221 SALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFP 280
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
T + A + L+ GRQ+H +K ++ DLIL N+L+ MY KCG ++D+ I
Sbjct: 281 ADQSTLTSVLRACTGSSLLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFI 338
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
FS MA +D ISW++MI GL+ +G + EAL ++++M G P+ +T LGVL AC+HAGLV
Sbjct: 339 FSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLV 398
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++GW F SM N YG+ PG +HY +++LLGRAGK+ + + + + EP+ W L+
Sbjct: 399 NEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRAGKLDEMVKLIHEMTCEPDVVTWRTLLD 458
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C ++ + D+A+ A K +L+LD +A +V L NIYA + R ++ +R+ M +G+RK
Sbjct: 459 ACR-AQRNVDLATYAAKEILKLDQQDAGAYVLLSNIYANSKRWDDVAEVRRTMSARGIRK 517
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PGCSWI V ++H F GD+ P +++I
Sbjct: 518 EPGCSWIEVNNQIHAFIVGDKSHPQIDEI 546
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 118/231 (51%), Gaps = 14/231 (6%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y+ + +A +FD MP+R+ ++WT+MIS Y +L A+ L M+ G P
Sbjct: 125 LLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPN 184
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF+ + A + L +Q+H +K E D+ + ++L+ Y+K GE+ ++ +F
Sbjct: 185 MYTFSSVLRACERLCDL---KQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFR 241
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M D + WNS+I + H EAL +Y++M G D T VL AC + L++
Sbjct: 242 EMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLEL 301
Query: 241 GWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVE 287
G ++ ++ FD + +++++ + G ++DA+ R+ V+
Sbjct: 302 GRQVHVHVLK-------FDQDLILNNALLDMYCKCGSLEDAKFIFSRMAVK 345
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
TS + + N + A+ + M G ++ L + + +G+++H
Sbjct: 53 TSSLLNHCYNRDLPRAMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKRVHNHIFS 112
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
Y L N+L++MY K ++++ +F M R+ +SW +MI S A+ +
Sbjct: 113 NGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKL 172
Query: 210 YETMLEFGLYPDTVTFLGVLTAC--------AHAGLVDKGWE 243
M+ G+ P+ TF VL AC H+G++ G E
Sbjct: 173 LVFMIRDGVMPNMYTFSSVLRACERLCDLKQVHSGILKAGLE 214
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 24 DQSL---NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
DQ L N++++ Y + G LE A+ +F + +++ I+W+ MISG G +A +LFDS
Sbjct: 313 DQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDS 372
Query: 81 M----PDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVA 135
M P + I ++ L+ E F M +G P ++ L +G
Sbjct: 373 MKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRAG 432
Query: 136 YLDQGRQLHGMQVKTIYE 153
LD+ VK I+E
Sbjct: 433 KLDE-------MVKLIHE 443
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 218/365 (59%), Gaps = 1/365 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
++ S MI+G V+ G E+A E+F +P +N +A+T MI+G+ G++ +A +LF +
Sbjct: 186 NEVSWTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIR 245
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+D W MI+G+ QN EA++LF +M+ G P + TF LF A S+A LD+GRQ
Sbjct: 246 CKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQ 305
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+ + +K DL + N+LV+MY+KCGEI S F +++ D +SWN++I + HG
Sbjct: 306 TNALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGL 365
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
A ++ M+ G+ PD +TFL +L+AC AG VD+ LF+ MV+ YG+ P +HY
Sbjct: 366 YDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEHYS 425
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+++++ RAG++ A + + +P E + +IWGA + C + ++ + A + +L LDP
Sbjct: 426 CVVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLVGCNI-HSNVKLGELAARSILNLDP 484
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
N+ +V + NIYAA + ++ +R M+ +G++K SW+ + ++ F GD P
Sbjct: 485 YNSGAYVMMSNIYAAAGKWKDVNRMRVLMKEQGIKKQTAYSWMQIGNKLQCFVGGDPSHP 544
Query: 383 HVEDI 387
+++DI
Sbjct: 545 NIDDI 549
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 150/302 (49%), Gaps = 28/302 (9%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D + NSM+ Y Q G L+ ++ LF+++PI+N ++W +I+ + + A F +MP
Sbjct: 59 DIVTYNSMLTAYWQNGFLQHSKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAMP 118
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEM----------MAHGFSPLNGTFAV-----L 127
+++ ++ +M+SG+V+ + EA +F E+ M G+ + G + L
Sbjct: 119 EKNVASYNAMMSGFVKMGRVEEAKKVFEEIPRPNVVSYTVMIDGYMKMEGGSGIKRARAL 178
Query: 128 FGAMGSVAYLDQGRQLHGMQVKTIYE-----------YDLILENSLVSMYAKCGEIDDSY 176
F AM S + + G+ ++E +++ ++++ + K G+ID+++
Sbjct: 179 FDAMPSRNEVSWTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAW 238
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+F + +D+ WN MI G + +GR EAL ++ M+ G+ PD +TF+ + TACA
Sbjct: 239 NLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLA 298
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
L+D+G + N++ +GL +++ + + G++ E P+ W +
Sbjct: 299 LLDEGRQT-NALAIKHGLNSDLSVSNALVTMYSKCGEIV-ISELAFDQISHPDIVSWNTI 356
Query: 297 VG 298
+
Sbjct: 357 IA 358
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 217/363 (59%), Gaps = 2/363 (0%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP-DR 84
S N MI GY +GQ +K+++LF+ + +++ + MI+ Y G++ +A LFD +R
Sbjct: 337 SNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGER 396
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+ + W SM+SGY+ N +EA+ L+ M TF+VLF A + QG+ LH
Sbjct: 397 NCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLH 456
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
KT Y+ ++ + +LV Y+KCG + D+ R F+++ + +W ++I G + HG S
Sbjct: 457 AHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGS 516
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EA++ + +ML+ G+ P+ TF+ VL+AC+HAGLVD+G + F+SM +Y + P +HY +
Sbjct: 517 EAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCV 576
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LLGR+G+VK+AEEF++++P++ + IWGAL+ + ++ RA +L LDP +
Sbjct: 577 VDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFW-NNVELGERAAVKLFSLDPNS 635
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
V L N+YA R + T +RK ++ +RK G SWI + VH+FS D P+
Sbjct: 636 VSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVEDTTHPYS 695
Query: 385 EDI 387
+ I
Sbjct: 696 DVI 698
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 18/276 (6%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+++++ YVQ + +A+ +F+ + N + W+ M++GY+ + A ++F+ MP RD +
Sbjct: 142 SALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVV 201
Query: 88 AWTSMISGYVQNELIAE-AISLFGEM-MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
AWT++ISGY + E E A+ LFG M + P T + + L G+ +HG
Sbjct: 202 AWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHG 261
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHGRAS 204
+ +K +++D + ++L Y +DD+ R++ +M + +S+I GL GR
Sbjct: 262 LCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVK 321
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EA ++ + + L + + G A +G K +LF M H S+
Sbjct: 322 EAGMIFYGLRDKTLISNNLMIKGY----AMSGQFKKSKKLFEKM--------SLKHLTSL 369
Query: 265 ---INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
I + + G++ +A + + E N W +++
Sbjct: 370 NTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMM 405
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+ + G++ +A +FD MP R +W +MISGY Q EA++L M +
Sbjct: 44 IAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNE 103
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
+F+ A L G+Q+H + K+ Y+ + ++L+ Y +C I ++ +F
Sbjct: 104 VSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEE 163
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETM 213
+ + + W+ M+ G +A+ ++E M
Sbjct: 164 LRDENHVLWSLMLAGYVQRDMIGDAMEIFEKM 195
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 25/263 (9%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR- 84
S N I + + G+L +A+ +FD +P+R +W MISGY G+ +A L M
Sbjct: 39 STNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSC 98
Query: 85 ---DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ +++++ +S + + + + G+ FG +GS A L
Sbjct: 99 VKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQR--------FGPVGS-ALLHYYV 149
Query: 142 QLHGMQVKTIYEYDLILENS-----LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
Q G++ + +L EN +++ Y + I D+ IF M RD ++W ++I G
Sbjct: 150 QCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISG 209
Query: 197 LSDHGRASE-ALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+ E AL ++ M + P+ T VL CA ++ G +V+ +
Sbjct: 210 YAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVG-----KVVHGLCI 264
Query: 255 QPGFDHYISIINLLGRAGKVKDA 277
+ GFD S+ + L V DA
Sbjct: 265 KDGFDFDNSVSSALAEFYCVSDA 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
++ Y +I N ++ +AK G++ ++ +F M R SWN+MI G S G+ +E
Sbjct: 27 LEASQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTE 86
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
ALT+ M + + V+F L+AC G + G ++ +S++ G Q +++
Sbjct: 87 ALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQI-HSLLFKSGYQRFGPVGSALL 145
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ + +++A E V + NH +W ++
Sbjct: 146 HYYVQCCGIREA-EMVFEELRDENHVLWSLMLA 177
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 224/363 (61%), Gaps = 4/363 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI GY Q G+ ++A +LF+ +P R+ +W M++G++ G + +A LF +MP ++
Sbjct: 234 SWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKN 293
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
I WT+M++GYVQ+ L EA+ LF +M A+ G P GTF + GA +A L +G+Q+H
Sbjct: 294 VITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIH 353
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN--MAYRDKISWNSMIMGLSDHGR 202
M KT+++ + ++L++MY+KCG+ + ++F + + D I+WN MI + HG
Sbjct: 354 QMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGY 413
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
+EA+ ++ M E G + VT++G+LTAC+HAGL D+G++ F+ ++ + +Q DHY
Sbjct: 414 GNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYT 473
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+I+L GRAG++ +A + L E + ++WGAL+ C + +AD+ ++L+++P
Sbjct: 474 CLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSV-HGNADIGKLVADKVLKMEP 532
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
NA ++ N+YA+ E ++R +M+ KG++K PGCSWI V V VF D+
Sbjct: 533 ENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVNDKSHS 592
Query: 383 HVE 385
E
Sbjct: 593 QFE 595
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 46/288 (15%)
Query: 16 EGNLNN----FDDQS------LNSMINGYVQAGQLEKAQELFDTVPIRNK-IAWTCMISG 64
EG +N FD+ S +MI+GY++ G + +A++LFD + I WT M+SG
Sbjct: 58 EGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSG 117
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ ++ +A LF+ MP R+ ++W +MI GY +N EA+ LFG M N
Sbjct: 118 YIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWN--- 174
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A+ +D +L + E D++ ++V+ +K G +D + +F M
Sbjct: 175 -TVMTALAHCGRIDDAERL----FNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPI 229
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLE-------------------------FGLY 219
R+ +SWN+MI G + +GR EAL ++E M E F
Sbjct: 230 RNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAM 289
Query: 220 P--DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
P + +T+ ++T GL ++ +LFN M + GL+P +++++
Sbjct: 290 PQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVL 337
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 23/276 (8%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD- 83
+ N I+ + G++ +A+++FD + R+ WT MISGY+ G + +A LFD PD
Sbjct: 46 KRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDR-PDA 104
Query: 84 -RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+ I WT+M+SGY++ I EA LF EM N Y GR
Sbjct: 105 QKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMID---------GYARNGRT 155
Query: 143 LHGMQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+ + + E +++ N++++ A CG IDD+ R+F+ M RD +SW +M+ GLS +G
Sbjct: 156 QEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNG 215
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
R A V++ M + V++ ++ A G D+ +LF M + +
Sbjct: 216 RVDAAREVFDKM----PIRNVVSWNAMIAGYAQNGRFDEALKLFERMP-----ERDMPSW 266
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+++ + G + AE+ +P + N W A++
Sbjct: 267 NTMVTGFIQNGDLNRAEQLFHAMP-QKNVITWTAMM 301
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 134/256 (52%), Gaps = 12/256 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI+GY + G+ ++A +LF +P RN ++W +++ G++ A LF+ M +RD
Sbjct: 141 SWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERD 200
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++WT+M++G +N + A +F +M N A Y GR
Sbjct: 201 VVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIA---------GYAQNGRFDEA 251
Query: 146 MQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+++ + + E D+ N++V+ + + G+++ + ++F M ++ I+W +M+ G HG +
Sbjct: 252 LKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSE 311
Query: 205 EALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
EAL ++ M GL P T TF+ VL AC+ + +G ++ + M++ Q +
Sbjct: 312 EALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQI-HQMISKTVFQESTYVVSA 370
Query: 264 IINLLGRAGKVKDAEE 279
+IN+ + G A++
Sbjct: 371 LINMYSKCGDFHVAKK 386
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 223/370 (60%), Gaps = 4/370 (1%)
Query: 24 DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
D+ N+++N YV+ G + +A+++F+ + +R+ ++W+C + G + V LFD MP+
Sbjct: 158 DKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPE 217
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
R+ +AWT MI GYV N EA L EM+ GF T + A + GR
Sbjct: 218 RNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRW 277
Query: 143 LHGMQVKTI-YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+H VK + ++ +++ SLV MYAKCG I+ + +F +M R+ ++WN+M+ GL+ HG
Sbjct: 278 VHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHG 337
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A+ ++ +M+E + PD VTF+ +L+AC+H+GLV+KGW+ F+ + Y ++P +HY
Sbjct: 338 MGKIAVDMFPSMVE-EVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHY 396
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
++ LLGRAG++++AE V + + PN + G+L+G C + + + + LLE+D
Sbjct: 397 ACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSC-YAHGRLQLGEKIMRDLLEMD 455
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
PLN H+ L N+YA + + + SLR+ ++ +G++K PG S I V G++H F +GD+
Sbjct: 456 PLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSH 515
Query: 382 PHVEDILLQI 391
+I +++
Sbjct: 516 TRTSEIYMKL 525
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 232/432 (53%), Gaps = 45/432 (10%)
Query: 1 MYSVFGLMDYASNALE--GNLNNFDDQSLNSMINGYVQAGQLEKAQELFDT--------- 49
MY+ G +D A E G+ N+ + ++M+ GY Q G +KA +LF+
Sbjct: 263 MYAKCGSLDDAVRTFEFSGDKNSI---TWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPS 319
Query: 50 ----VPIRNKIAWTC--------------------------MISGYLSAGQVFKACDLFD 79
V + N + C ++ Y G + A F+
Sbjct: 320 EFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFE 379
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
+ D + WTS+I+GYVQN ++L+G+M P T A + A S+A LDQ
Sbjct: 380 CVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQ 439
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+Q+H +K ++ ++ + ++L +MY KCG +DD Y IF M RD ISWN+MI GLS
Sbjct: 440 GKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQ 499
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
+G ++AL ++E ML G+ PD VTF+ +L+AC+H GLVD+GWE F M + + + P +
Sbjct: 500 NGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVE 559
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
HY ++++L RAGK+ +A+EF+ V+ +W L+G C + + ++ A ++L+E
Sbjct: 560 HYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACK-NHRNYELGVYAGEKLVE 618
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
L + +V L +IY A + +R+ M+ +GV K PGCSWI +KG VHVF GD
Sbjct: 619 LGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDN 678
Query: 380 LEPHVEDILLQI 391
P V++I L++
Sbjct: 679 QHPQVDEIRLEL 690
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 148/289 (51%), Gaps = 27/289 (9%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR--NKIAWTCMISG-----------YLSAGQVFKA 74
N + N + AG A L D V + + +A SG Y G VF A
Sbjct: 113 NVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDA 172
Query: 75 CDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV--LFGAMG 132
LFD MP+R++++W +MISGY +++ +A+ +F E+M + FA+ + A+
Sbjct: 173 RKLFDRMPERNTVSWATMISGYASSDIADKAVEVF-ELMRRE-EEIQNEFALTSVLSALT 230
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
S ++ GRQ+H + +K + + N+LV+MYAKCG +DD+ R F ++ I+W++
Sbjct: 231 SDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSA 290
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
M+ G + G + +AL ++ M G+ P T +GV+ AC+ V +G ++ +S+
Sbjct: 291 MVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQM-----HSF 345
Query: 253 GLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ GF + +++++ + G + DA + +P+ +W +++
Sbjct: 346 AFKLGFGLQLYVLSAVVDMYAKCGSLADARKG-FECVQQPDVVLWTSII 393
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 138/315 (43%), Gaps = 43/315 (13%)
Query: 29 SMINGYVQAGQLEKAQELFDTV----PIRNKIAWTCMISG-------------------- 64
+MI+GY + +KA E+F+ + I+N+ A T ++S
Sbjct: 189 TMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKN 248
Query: 65 ---------------YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF 109
Y G + A F+ D++SI W++M++GY Q +A+ LF
Sbjct: 249 GLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLF 308
Query: 110 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
+M + G P T + A + + +G+Q+H K + L + +++V MYAKC
Sbjct: 309 NKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKC 368
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
G + D+ + F + D + W S+I G +G L +Y M + P+ +T VL
Sbjct: 369 GSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVL 428
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 289
AC+ +D+G ++ ++ YG + ++ + + G + D R+P +
Sbjct: 429 RACSSLAALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP-SRD 486
Query: 290 HAIWGALVGVCGLSK 304
W A++ GLS+
Sbjct: 487 VISWNAMIS--GLSQ 499
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 16/243 (6%)
Query: 65 YLSAGQVFKACDLFDSMPD--RDSIAWTSMISGYVQNELIAE---AISLFGEMM-AHGFS 118
Y + A LFDS+ D +D ++W S+I+ + QN + AISLF MM A+
Sbjct: 56 YAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVI 115
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T A +F A +++ + G+Q H + VKT D+ + +SL++MY K G + D+ ++
Sbjct: 116 PNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKL 175
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M R+ +SW +MI G + A +A+ V+E M + VL+A V
Sbjct: 176 FDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFV 235
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWG 294
G + V+S ++ G +S+ N L + G + DA + N W
Sbjct: 236 YTGRQ-----VHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVR-TFEFSGDKNSITWS 289
Query: 295 ALV 297
A+V
Sbjct: 290 AMV 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK--ISWNSMIMG 196
+GR LH +KT + + N+ +++YAK + + +F ++ DK +SWNS+I
Sbjct: 29 KGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINA 88
Query: 197 LSDHGRASE---ALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
S + +S A++++ M+ + P+ T GV +A ++ V G + +S
Sbjct: 89 FSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQ-----AHSV 143
Query: 253 GLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 308
++ G D Y+ S++N+ + G V DA + R+P E N W ++ +D
Sbjct: 144 AVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP-ERNTVSWATMIS----GYASSD 198
Query: 309 VASRATK 315
+A +A +
Sbjct: 199 IADKAVE 205
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 216/380 (56%), Gaps = 8/380 (2%)
Query: 15 LEGNLNNFDDQ------SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA 68
L+G L FD+ S N+M++G+ +AG+++KA +LF+ + R+ ++W+ M+ GY
Sbjct: 206 LDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKN 265
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G + A LFD P ++ + WT++ISGY + + EA++L EM G +G F +
Sbjct: 266 GDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISIL 325
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYRDK 187
A L G+++H +++ + + NS + MYAKCG +DD++R+F+ M +D
Sbjct: 326 AACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDL 385
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
+SWNSMI G HG +++ ++ TM+ G PD TF+G+L AC HAGLV++G F S
Sbjct: 386 VSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYS 445
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDA 307
M YG+ P +HY +++LLGR G +K+A V +P EPN I G L+G C + D
Sbjct: 446 MQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRM-HNDV 504
Query: 308 DVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
+A+ +K L +L P + L NIYA + I + +RK+M +G +K G S I V
Sbjct: 505 KLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEV 564
Query: 368 KGRVHVFSSGDRLEPHVEDI 387
+ VH F+ D P DI
Sbjct: 565 EEEVHEFTVRDWSHPKSGDI 584
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 127/270 (47%), Gaps = 40/270 (14%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+I+ Y + G +E A ++F + R+ ++W M+ G + G + A +FD MP+RD +
Sbjct: 163 NSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRV 222
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +M+ G+ + + +A LF E MA
Sbjct: 223 SWNTMLDGFTKAGEMDKAFKLF-ERMA--------------------------------- 248
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
E D++ +++V Y+K G++D + +F ++ + W ++I G ++ G+ EA+
Sbjct: 249 -----ERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAM 303
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+ + M + GL D F+ +L ACA +G++ G ++ +S + S + S I++
Sbjct: 304 NLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSR-FRCSTKVLNSFIDM 362
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ G V DA + E + W +++
Sbjct: 363 YAKCGCVDDAFRVFNGMKTEKDLVSWNSMI 392
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 14/241 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG---EMMAHGF 117
+I+ Y + A ++F+ +PD + + +I Y + + ++ FG +M G
Sbjct: 60 LIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGV 119
Query: 118 SPLNGTFAVLF-GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
N T+ L G GS ++L + +H K + +D+ + NSL+ Y +CG+++ +
Sbjct: 120 LADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAM 179
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
++FS M RD +SWNSM+ GL +G AL V++ M E D V++ +L AG
Sbjct: 180 KVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPE----RDRVSWNTMLDGFTKAG 235
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+DK ++LF M + + +++ + G + A R PV+ N +W +
Sbjct: 236 EMDKAFKLFERMA-----ERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVK-NLVLWTTI 289
Query: 297 V 297
+
Sbjct: 290 I 290
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 229/426 (53%), Gaps = 41/426 (9%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTV 50
MY+ G +D+A L D S +MI GY Q + +A LF D +
Sbjct: 530 MYAKHGKLDHALKIFR-RLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNI 588
Query: 51 PIRNKI----------------AWTCM-------------ISGYLSAGQVFKACDLFDSM 81
+ I A +C+ +S Y G+V +A FD +
Sbjct: 589 GFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI 648
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+D+++W S++SG+ Q+ EA+++F +M G + TF A ++A + G+
Sbjct: 649 YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGK 708
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+HGM KT Y+ + + N+L+++YAKCG IDD+ R F M +++ISWNSMI G S HG
Sbjct: 709 QIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHG 768
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
EAL ++E M + + P+ VTF+GVL+AC+H GLVD+G F SM ++ L P +HY
Sbjct: 769 CGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHY 828
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LLGR+G + A+ FV +P++P+ +W L+ C + K + D+ A LLEL+
Sbjct: 829 ACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHK-NIDIGEFAASHLLELE 887
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
P ++ +V + N+YA + + R+ M+ +GV+K PG SW+ V VH F +GD+
Sbjct: 888 PKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNH 947
Query: 382 PHVEDI 387
P + I
Sbjct: 948 PRADMI 953
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 144/278 (51%), Gaps = 7/278 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G++ A +F + + D ++WT+MI+GY Q++ EA++LF EM G
Sbjct: 527 LIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSD 586
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
N FA A + LDQGRQ+H + Y DL + N+LVS+YA+CG++ ++Y F
Sbjct: 587 NIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFD 646
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ +D +SWNS++ G + G EAL ++ M + GL ++ TF ++A A+ V
Sbjct: 647 QIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRI 706
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G ++ + M+ G + ++I L + G + DAE +P + N W +++
Sbjct: 707 GKQI-HGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMP-DKNEISWNSMIT-- 762
Query: 301 GLSKTDADV-ASRATKRLLELDPLNAPGHVALCNIYAA 337
G S+ A + + + +LD L P HV + +A
Sbjct: 763 GYSQHGCGFEALKLFEDMKQLDVL--PNHVTFVGVLSA 798
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 129/241 (53%), Gaps = 10/241 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A +F+++ RDS++W +MISG QN EA+ LF +M G P
Sbjct: 224 LIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPT 283
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F+ + A V + + G+QLHG+ +K + + + N+LV++Y++ G + + +IF
Sbjct: 284 PYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFH 343
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M+ RD++S+NS+I GL+ G + AL +++ M PD VT +L+ACA G +
Sbjct: 344 CMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPN 403
Query: 241 GWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G + +SY ++ G I S+++L + +K A EF L E N +W +
Sbjct: 404 GKQF-----HSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETE-NVVLWNVM 457
Query: 297 V 297
+
Sbjct: 458 L 458
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISG-----YLSAGQVFKACDL 77
D ++ S+++ G L ++ F + I+ + ++ G Y+ + A +
Sbjct: 384 DCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEF 442
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
F + + + W M+ GY Q + + ++ +F +M G P T+ + ++
Sbjct: 443 FLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGAT 502
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
D G Q+H +KT +++++ + + L+ MYAK G++D + +IF + D +SW +MI G
Sbjct: 503 DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGY 562
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+ H + +EAL +++ M + G+ D + F ++ACA +D+G + +++ G
Sbjct: 563 TQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQ-----IHAQSCLSG 617
Query: 258 FDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +SI ++L R GKV++A ++ + N + W +LV
Sbjct: 618 YSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSLV 660
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y +G + A +F M RD +++ S+ISG Q I A++LF +M P
Sbjct: 325 LVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPD 384
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T A L A SV L G+Q H +K D+++E SL+ +Y KC +I ++ F
Sbjct: 385 CVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFL 444
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ + WN M++G +++ ++ M G+ P+ T+ +L C G D
Sbjct: 445 ACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDL 504
Query: 241 GWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G E ++ V G Q F+ Y+S +I++ + GK+ A + RL E + W A++
Sbjct: 505 G-EQIHTQVLKTGFQ--FNVYVSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIA 560
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I YL+ G + A ++FD MP R W + + ++ L+ LF M+
Sbjct: 122 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 181
Query: 121 NGTFAV-LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
FAV L G G+ Q+H + + +E + N L+ +Y K G + + ++F
Sbjct: 182 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 241
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
N+ RD +SW +MI GLS +G EA+ ++ M G+ P F VL+AC +
Sbjct: 242 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFE 301
Query: 240 KGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEE 279
G +L + L+ GF + Y+ +++ L R+G + AE+
Sbjct: 302 FGKQLHGLV-----LKQGFSSETYVCNALVTLYSRSGNLSSAEQ 340
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 196/313 (62%), Gaps = 3/313 (0%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNE-LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+F+ +P D + W +MISG+ Q+E L +A+S F EM GF P + +F + A +++
Sbjct: 302 VFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLS 361
Query: 136 YLDQGRQLHGMQVKTIYEYDLI-LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
G+Q+H + +K+ + + + N+ V+MY+KCG + D+ RIF M ++ +S NSMI
Sbjct: 362 SPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMI 421
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G + HG E+L ++E ML+ + P+ +TF+ VL+ACAH G VD+G + FN M +G+
Sbjct: 422 AGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGI 481
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
+P +HY +I+LLGRAGK+ AE + +P +P W AL+G C + ++A +A
Sbjct: 482 EPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLGACK-KHGNVELAVKAA 540
Query: 315 KRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVF 374
+ L+L+P NA +V L N+YA+ +R E ++++ MR +GV+K PGCSWI + +VHVF
Sbjct: 541 NKFLQLEPYNAAPYVMLSNVYASANRWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVF 600
Query: 375 SSGDRLEPHVEDI 387
+ D P +++I
Sbjct: 601 VAEDTSHPRIKEI 613
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 7/219 (3%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC--MISGYLSAGQVFKACDLFD 79
D +L+ +I+ V+ L + F + + A C +++ Y G++ +A +F
Sbjct: 140 LDGFTLSGVISASVEDVGLVRQLHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRVFR 199
Query: 80 SMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
M + RD ++W +MI Q+ A+A+ LFGEM G T A + A + L
Sbjct: 200 EMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTAFTCLKDL 259
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE--IDDSYRIFSNMAYRDKISWNSMIM 195
G Q HG +K+ + + + + L+ +Y+KC + + ++F + D + WN+MI
Sbjct: 260 AGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMIS 319
Query: 196 GLSDHGRASE-ALTVYETMLEFGLYPDTVTFLGVLTACA 233
G S H E AL+ + M G PD +F+ V++AC+
Sbjct: 320 GFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACS 358
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Query: 34 YVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 93
Y + G A F N ++ +I A LFD +P+ D +++ ++I
Sbjct: 55 YSKFGTFSNALTAFHFTGYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLI 114
Query: 94 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 153
+ + + +A+S+F E+ G T + + A SV + RQLH + Y+
Sbjct: 115 AVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISA--SVEDVGLVRQLHCFALLCGYD 172
Query: 154 YDLILENSLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRASEALTVYE 211
+ N++++ Y + G +++++R+F M RD +SWN+MI+ H ++AL ++
Sbjct: 173 CYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFG 232
Query: 212 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
M GL D T VLTA + G + M+ S
Sbjct: 233 EMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKS 272
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
++ Y G + A +FD+MP++++++ SMI+GY Q+ E++ LF M+ P N
Sbjct: 390 VAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNN 449
Query: 122 GTFAVLFGAMGSVAYLDQGRQ-LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF + A +D+G + + M+ K E + + ++ + + G+++ + RI
Sbjct: 450 ITFISVLSACAHTGKVDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAERIIE 509
Query: 181 NMAYRD-KISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
M + I W +++ HG A+ L+ Y
Sbjct: 510 TMPFDPGSIEWAALLGACKKHGNVELAVKAANKFLQLEPY 549
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 21/194 (10%)
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
L+ F +L+ G+ + + H ++ Y N+++ AK + ++++F
Sbjct: 47 LSNHFTLLYSKFGT--FSNALTAFHFTGYPNVFSY-----NTIIHACAKHNLPNLAHQLF 99
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH-AGLV 238
+ D +S+N++I + G +A++V++ + E GL D T GV++A GLV
Sbjct: 100 DEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISASVEDVGLV 159
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAI-W 293
+ ++ + L G+D Y S+ N + GR G++ +A + + W
Sbjct: 160 RQ--------LHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSW 211
Query: 294 GALVGVCGLSKTDA 307
A++ CG + A
Sbjct: 212 NAMIVACGQHREGA 225
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 218/369 (59%), Gaps = 8/369 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+++++ YV+ +E+AQ+ F+ N +++T +I GYL +G+ A +F+ MP+R+ I
Sbjct: 199 SALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFNEMPERNVI 258
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +M+ G + EA+ F +M+ GF P TF A ++A L GR H
Sbjct: 259 SWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGFGRSFHACA 318
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+K + + + + NSL+S YAKCG + DS IF + R+ +SWN++I G + +GR +EA+
Sbjct: 319 IKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAI 378
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS--MVNSYGLQPGFDHYISII 265
+++E M G+ P+ V+ LG+L AC HAGLVD+G+ FN + + L+P +HY ++
Sbjct: 379 SLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPNLLKP--EHYACMV 436
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
+LL R+G+ +A+ F+ R+P P W A++G C + + ++ A K +L LDP +
Sbjct: 437 DLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHH-NIELGELAAKNILALDPDDV 495
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVE 385
+V + N ++A R ++ LR E++ KG+++ PG SWI VKG+VH F D +
Sbjct: 496 SSYVMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSSWIEVKGKVHAFLKADENNNNKN 555
Query: 386 ---DILLQI 391
D+LL+I
Sbjct: 556 DEIDVLLRI 564
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 36/260 (13%)
Query: 74 ACDLFDSMPDRDSIAW-TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG 132
AC++FD MP+ ++ T +I+ + + +AI LF M+A P TF +
Sbjct: 112 ACNMFDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTST 171
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA------------------------- 167
+ + G+Q+HG +KT ++ + ++LV +Y
Sbjct: 172 RLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTT 231
Query: 168 ------KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
K G +D+ R+F+ M R+ ISWN+M+ G S G EA+ + ML G P+
Sbjct: 232 LIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPN 291
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 281
TF ++A ++ + G + G F S+I+ + G +KD+
Sbjct: 292 ESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGN-SLISFYAKCGSMKDSLLIF 350
Query: 282 LRLPVEPNHAIWGALVGVCG 301
++ + N W A+ +CG
Sbjct: 351 DKI-CKRNVVSWNAV--ICG 367
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 192/323 (59%), Gaps = 1/323 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G++ + LF+ +PDR+ + W ++I GYVQ A++LF M+ H P T+
Sbjct: 383 YAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTY 442
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ + A S+A L+ G Q+H + +KT+Y D ++ NSL+ MYAKCG I+D+ F M
Sbjct: 443 SSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNK 502
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
RD++SWN+MI G S HG + EAL +++ M P+ +TF+GVL+AC++AGL+ KG
Sbjct: 503 RDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAH 562
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
F SM Y ++P +HY ++ LLGR G+ +A + + + +P+ +W AL+G C + K
Sbjct: 563 FESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHK 622
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
D+ + +LE++P + HV L N+YA R + +RK M+ K VRK PG SW
Sbjct: 623 K-VDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSW 681
Query: 365 ILVKGRVHVFSSGDRLEPHVEDI 387
+ +G VH FS GD P ++ I
Sbjct: 682 VENQGVVHYFSVGDTSHPDIKLI 704
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 12/243 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y +G++ A LF+ MP D I W+ MI+ Y Q++ EA+ LF M P N TF
Sbjct: 282 YAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTF 341
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A + A S LD G+Q+H +K ++ + N+++ +YAKCGEI++S ++F +
Sbjct: 342 ASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPD 401
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
R+ ++WN++I+G G A+ ++ MLE + P VT+ VL A A ++ G ++
Sbjct: 402 RNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQI 461
Query: 245 ----FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
+M N + S+I++ + G++ DA ++ + + W A+ +C
Sbjct: 462 HSLTIKTMYNKDTVVAN-----SLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAM--IC 513
Query: 301 GLS 303
G S
Sbjct: 514 GYS 516
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 126/239 (52%), Gaps = 2/239 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G V A +FD + +D ++WT M++ Y +N E++ LF +M G+
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P N T + + + + G+ +HG +K Y++DL + +L+ +YAK GEI D+ R+
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRL 294
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M D I W+ MI + R+ EAL ++ M + + P+ TF VL ACA + +
Sbjct: 295 FEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSL 354
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
D G ++ +S V +GL +I+++ + G+++++ + LP + N W ++
Sbjct: 355 DLGKQI-HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP-DRNDVTWNTII 411
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 13/231 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y+ + + A LFD MP ++I++ ++ GY ++ +A+ + G
Sbjct: 76 LLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVN 135
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F L + S+ LH K + D + +L+ Y+ G +D + +F
Sbjct: 136 PFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFD 195
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
++ +D +SW M+ +++ E+L ++ M G P+ T G L +C
Sbjct: 196 DICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCL------- 248
Query: 241 GWELFN--SMVNSYGLQPGFDHY----ISIINLLGRAGKVKDAEEFVLRLP 285
G E FN V+ L+ +DH I+++ L ++G++ DA+ +P
Sbjct: 249 GLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 43/250 (17%)
Query: 19 LNNFDDQSLNSMINGYVQAGQLEKAQELF------DTVPI-------------------- 52
L + +D + N++I GYVQ G E+A LF D P
Sbjct: 399 LPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPG 458
Query: 53 -------------RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 99
++ + +I Y G++ A FD M RD ++W +MI GY +
Sbjct: 459 LQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMH 518
Query: 100 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 159
+ EA++LF M P TF + A + L +G Q H + Y+ +E
Sbjct: 519 GMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKPCIE 577
Query: 160 N--SLVSMYAKCGEIDDSYRIFSNMAYRDKI-SWNSMIMGLSDHGRASEALTVYETMLEF 216
+ +V + + G D++ ++ +AY+ + W +++ H + + +LE
Sbjct: 578 HYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEM 637
Query: 217 GLYPDTVTFL 226
+ D L
Sbjct: 638 EPHDDATHVL 647
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 197/334 (58%), Gaps = 1/334 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
+++ WT ++ Y G + +A +FD M D+D ++WT+MI ++ E SLF ++M
Sbjct: 230 DEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLM 289
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P TFA + A +A G+++HG + Y+ ++LV +Y+KCG +
Sbjct: 290 GSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTE 349
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ R+F+ M D +SW S+I+G + +G+ AL +E++L G PD +TF+GVL+AC
Sbjct: 350 TARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACT 409
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
HAGLVD G E F+S+ +GL DHY +I+LL R+G+ K+AE + +P++P+ +W
Sbjct: 410 HAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLW 469
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
+L+G C + + ++A RA K L EL+P N ++ L NIYA E T +R +M
Sbjct: 470 ASLLGGCRI-HGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDN 528
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+G+ K PG SWI +K +VHVF GD P + DI
Sbjct: 529 RGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDI 562
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 150/275 (54%), Gaps = 11/275 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +I+ Y + G L AQ LFD +P ++ +W MISGY + G++ +A LFD MP RD+
Sbjct: 102 NRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNF 161
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGM 146
+W ++ISGYV EA+ LF M + S N T + A +++ L +G+++HG
Sbjct: 162 SWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY 221
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
+++ E D ++ +L+ +Y KCG ++++ IF MA +D +SW +MI + GR E
Sbjct: 222 LIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEG 281
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY----I 262
+++ ++ G+ P+ TF GVL ACA D E V+ Y + G+D +
Sbjct: 282 FSLFRDLMGSGVRPNEYTFAGVLNACA-----DLAAEQMGKEVHGYMTRVGYDPFSFAAS 336
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+++++ + G + A ++P P+ W +L+
Sbjct: 337 ALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLI 370
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
+ +I + Q + EA+ + P ++ L A L+ G+++H
Sbjct: 35 FEEIIELFCQQNRLKEAVDYLHRIP----QPSPRLYSTLIAACLRHRKLELGKRVHAHTK 90
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
+ + +++ N L+ MYAKCG + D+ +F + +D SWN+MI G ++ GR +A
Sbjct: 91 ASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARK 150
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW-----ELF-----NSMVNSYGLQPGF 258
+++ M + D ++ V++ G V +GW +LF N N
Sbjct: 151 LFDEM----PHRDNFSWNAVIS-----GYVSQGWYMEALDLFRMMQENESSNCNMFTLSS 201
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCG 301
+ R G K+ +++R +E + +W AL+ G CG
Sbjct: 202 ALAAAAAISSLRRG--KEIHGYLIRSGLELDEVVWTALLDLYGKCG 245
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 219/361 (60%), Gaps = 1/361 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I+ Y + G L A ++F+ + R+ I+W +I GY+ GQ+ A +LFD MP R +
Sbjct: 150 NALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIV 209
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+WT+MI+GY + +A+ +F EM G P + + A + L+ G+ +H
Sbjct: 210 SWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYA 269
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K + + N+L+ MYAKCG ID+++ +F + +D ISW++MI GL++HG+ EA+
Sbjct: 270 DKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAI 329
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++E M + + P+ +TFLGVL AC+H GL D+G + F+ M SY ++P +HY +I+L
Sbjct: 330 QLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDL 389
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGR+G + A + + ++P++P+ IW +L+ C + + + +A A K+L+EL+P +
Sbjct: 390 LGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHR-NLQIAVIAVKQLMELEPEESGN 448
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+V L N+YA + + +++++RK +R K ++K PG S I V V F S D +P +++
Sbjct: 449 YVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEV 508
Query: 388 L 388
Sbjct: 509 F 509
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 44/278 (15%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T M+ + G V A LF + + + ++I Y N + AIS+F +M+ H +
Sbjct: 46 TKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTN 105
Query: 119 ---PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
P TF + + + G Q+HG+ K ++ I EN+L+ MY K G++ ++
Sbjct: 106 SVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNA 165
Query: 176 YRIFSNMAYRDKISWNSMIMG----------------------------LSDHGRA---S 204
++F M++RD ISWNS+I G ++ +GR
Sbjct: 166 CKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYG 225
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
+AL V+ M G+ PD ++ + VL ACA G ++ G ++ Y + GF I
Sbjct: 226 DALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVG-----KWIHMYADKNGFLRKTGI 280
Query: 265 INLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
N L + G + +A +L VE + W ++G
Sbjct: 281 CNALIEMYAKCGCIDEAWNLFDQL-VEKDVISWSTMIG 317
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 219/361 (60%), Gaps = 1/361 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I+ Y + G L A ++F+ + R+ I+W +I GY+ GQ+ A +LFD MP R +
Sbjct: 150 NALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIV 209
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+WT+MI+GY + +A+ +F EM G P + + A + L+ G+ +H
Sbjct: 210 SWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYA 269
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K + + N+L+ MYAKCG ID+++ +F + +D ISW++MI GL++HG+ EA+
Sbjct: 270 DKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAI 329
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++E M + + P+ +TFLGVL AC+H GL D+G + F+ M SY ++P +HY +I+L
Sbjct: 330 QLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDL 389
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGR+G + A + + ++P++P+ IW +L+ C + + + +A A K+L+EL+P +
Sbjct: 390 LGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHR-NLQIAVIAVKQLMELEPEESGN 448
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+V L N+YA + + +++++RK +R K ++K PG S I V V F S D +P +++
Sbjct: 449 YVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEV 508
Query: 388 L 388
Sbjct: 509 F 509
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 44/278 (15%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T M+ + G V A LF + + + ++I Y N + AIS+F +M+ H +
Sbjct: 46 TKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTN 105
Query: 119 ---PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
P TF + + + G Q+HG+ K ++ I EN+L+ MY K G++ ++
Sbjct: 106 SVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNA 165
Query: 176 YRIFSNMAYRDKISWNSMIMG----------------------------LSDHGRA---S 204
++F M++RD ISWNS+I G ++ +GR
Sbjct: 166 CKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYG 225
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
+AL V+ M G+ PD ++ + VL ACA G ++ G ++ Y + GF I
Sbjct: 226 DALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVG-----KWIHMYADKNGFLRKTGI 280
Query: 265 INLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
N L + G + +A +L VE + W ++G
Sbjct: 281 CNALIEMYAKCGCIDEAWNLFDQL-VEKDVISWSTMIG 317
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 203/343 (59%), Gaps = 2/343 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S N++++ Y++ G+ AQ FD +P RN I+WT +++GY+ QV KA +FD M
Sbjct: 171 DVTSWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMS 230
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+R+ ++WT+MISGYVQN+ +A+ LF M P + TF+ + A + L G Q
Sbjct: 231 ERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQ 290
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
LH +K+ D+I SLV MYAKCG++D ++ +F ++ ++ +SWN++I G + HG
Sbjct: 291 LHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGL 350
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
A+ AL ++ M G PD VTF+ VL+AC HAGLV++G + F M+ YG+Q +HY
Sbjct: 351 ATRALEEFDRMKVVGT-PDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYS 409
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+++L GRAG+ +AE + +P EP+ +WGAL+ CGL ++ ++ A +R+ L+
Sbjct: 410 CMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGL-HSNLELGEYAAERIRRLES 468
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+ + L I + LR M+ +G++K SW+
Sbjct: 469 SHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQTAISWV 511
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 149/374 (39%), Gaps = 69/374 (18%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
LN MIN Y+ +++A +L D + N ++W +++ YL Q+ DLFD MP +D
Sbjct: 11 LNYMINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKD 70
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH- 144
+++W M+SG+ + F +M G P + T + L A+ S RQ+H
Sbjct: 71 AVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHA 130
Query: 145 ------------------------------GMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
G I D+ N+LVS Y + G+ D
Sbjct: 131 LAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVD 190
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY--------------- 219
+ F M R+ ISW +++ G + + ++A +V++ M E +
Sbjct: 191 AQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRF 250
Query: 220 ----------------PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
P+ TF VL ACA + + G +L ++ S G+ S
Sbjct: 251 VDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKS-GIANDVIWLTS 309
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
++++ + G + DA V + N W A++G +A+RA + + +
Sbjct: 310 LVDMYAKCGDM-DAAFGVFESIRDKNLVSWNAIIG----GYASHGLATRALEEFDRMKVV 364
Query: 324 NAPGHVALCNIYAA 337
P V N+ +A
Sbjct: 365 GTPDEVTFVNVLSA 378
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 214/371 (57%), Gaps = 7/371 (1%)
Query: 23 DDQSL-NSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISGYLSAGQVFKACDL 77
+DQ + N++I Y G + +A+ +FD + + +A MI GY G++ ++ +L
Sbjct: 160 NDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNL 219
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
FD M R S++W SMISGYV+N + EA+ LF +M GF T L A + L
Sbjct: 220 FDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGAL 279
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
G+ +H + +E ++I+ +++ MY KCG ++++ +F R WNS+I+GL
Sbjct: 280 QHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGL 339
Query: 198 SDHGRASEALTVYETMLEFGLY-PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ +G EA + + L PD+V+F+GVLTAC H G ++K + F M+N Y ++P
Sbjct: 340 AMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEP 399
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
HY I+++LG+AG +++AEE + +P++P+ IWG+L+ C + + +A RA +R
Sbjct: 400 SIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHR-NVQIARRAAQR 458
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
+ EL+P +A G+V + N++AA+++ E R M+ K PGCS I + G VH F +
Sbjct: 459 VYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIA 518
Query: 377 GDRLEPHVEDI 387
G RL P ++I
Sbjct: 519 GGRLHPKTQEI 529
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 46/258 (17%)
Query: 68 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 127
+G + A LF MP+ + +W ++I + ++ AISLF +M+ P T+ +
Sbjct: 74 SGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSV 133
Query: 128 FGAMGSVAYLDQGRQLHGMQVK-----------------------------------TIY 152
F A + + G QLHG VK +Y
Sbjct: 134 FKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELY 193
Query: 153 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 212
++D++ NS++ YAKCGEID+S +F +M R +SWNSMI G +G+ EAL ++
Sbjct: 194 DHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNK 253
Query: 213 MLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYI----SIINL 267
M G T + +L ACAH G + G W V+ Y + F+ + +II++
Sbjct: 254 MQVEGFEVSEFTMVSLLNACAHLGALQHGKW------VHDYIKRNHFELNVIVVTAIIDM 307
Query: 268 LGRAGKVKDAEEFVLRLP 285
+ G V++A E P
Sbjct: 308 YCKCGSVENAVEVFETCP 325
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/371 (34%), Positives = 214/371 (57%), Gaps = 8/371 (2%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDL 77
D +L+S++ + + + K +E+ +RN + +I Y ++ +
Sbjct: 226 DSFTLSSILPIFAEHVDVNKGKEIHG-YAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRA 284
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
F +P +D+I+W S+I+G VQN + F M+ P+ +F+ + A + L
Sbjct: 285 FYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTAL 344
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
GRQLHG V+ ++ + + +SLV MYAKCG I + +F + RD ++W ++IMG
Sbjct: 345 SLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGC 404
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+ HG A +A++++E MLE G+ P V F+ VLTAC+HAGLVD+GW FNSM +G+ PG
Sbjct: 405 AMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPG 464
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLP-VEPNHAIWGALVGVCGLSKTDADVASRATKR 316
+HY ++ +LLGRAG++++A +F+ + V+P ++W L+ C K+ ++A + +
Sbjct: 465 LEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKS-VELAEKVLDK 523
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
LL +D N +V + NIY+A R + LR MR KG++K P CSWI V +VH F +
Sbjct: 524 LLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMA 583
Query: 377 GDRLEPHVEDI 387
GD+ P+ + I
Sbjct: 584 GDKSHPYYDKI 594
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 26/233 (11%)
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
AW+S+I Y + L+ + S F M + P F L A + + LH
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 148 VKTIYEYDLILENSLVSMYAK---CGEIDDSY------------RIFSNMAYRDKISWNS 192
V+ + DL + N+L++ YAK G++ D + ++F M RD +SWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 193 MIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
+I G + +G EAL + M + G L PD+ T +L A V+KG E ++
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKE-----IHG 251
Query: 252 YGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
Y ++ GFD + S+I++ + +++ + LP + W +++ C
Sbjct: 252 YAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP-RKDAISWNSIIAGC 303
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 224/366 (61%), Gaps = 7/366 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I+ Y + G+ + LF ++ ++ ++WT M+ Y A ++ AC +F+ MP + ++
Sbjct: 184 NALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTV 243
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W ++ISG+V+N EA+ +F +M+ G P TF + A S A + +G+Q+H
Sbjct: 244 SWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQI 303
Query: 148 VKTIYE---YDLILENSLVSMYAKCGEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGRA 203
++ +++ + N+L+ MYAKCG++ + +F M + +D +SWN++I G + +GR
Sbjct: 304 IRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRG 363
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
++L V++ M+E + P+ VTFLGVL+AC HAGLV+ G EL +SM YG++P +HY
Sbjct: 364 EDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYAL 423
Query: 264 IINLLGRAGKVKDAEEFVLRLPVE-PNH-AIWGALVGVCGLSKTDADVASRATKRLLELD 321
+I+LLGR ++++A + ++P E NH A+WGA++G C + + ++A +A + L L+
Sbjct: 424 LIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRV-HGNLELARKAAEALFALE 482
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
P N +V L NIYAA+ R + +R M+ +G++K P S I +K H F + D+
Sbjct: 483 PENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFH 542
Query: 382 PHVEDI 387
P + +I
Sbjct: 543 PQIGEI 548
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 42/347 (12%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +I+ Y + G E + FD +P + W ++S Y G +A LFD MP R+ +
Sbjct: 50 NGLIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLV 109
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG---RQLH 144
++ S+ISG ++E EA+ F EM +G L L + + + LD RQ+H
Sbjct: 110 SYNSLISGLTRHEFHKEAVKFFREMQ-NGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVH 168
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM--------- 195
G+ + +LIL N+L+ Y KCGE + S+ +F +M +D +SW SM++
Sbjct: 169 GVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRID 228
Query: 196 ----------------------GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
G +GR EAL V+ M++ G+ P TF+ VL ACA
Sbjct: 229 DACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACA 288
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
L+ +G ++ ++ F+ Y+ +++++ + G +K AE + +
Sbjct: 289 SEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVV 348
Query: 292 IWGALVGVCGLSKTDADVASRAT-KRLLELDPLNAPGHVALCNIYAA 337
W L + G ++ S A R++E + P HV + +A
Sbjct: 349 SWNTL--ITGFAQNGRGEDSLAVFDRMIESNI--EPNHVTFLGVLSA 391
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 39/273 (14%)
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG------ 170
FS F+ L S L G+ LH +KT ++ L N L+ +Y+KCG
Sbjct: 7 FSSTIEKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIH 66
Query: 171 -EIDD------------------------SYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
DD +Y++F M R+ +S+NS+I GL+ H E
Sbjct: 67 KAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKE 126
Query: 206 ALTVYETMLE--FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
A+ + M GL D T + +++ C+ V K + + G + +
Sbjct: 127 AVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTV-KWLRQVHGVATIVGFRTNLILNNA 185
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+I+ G+ G+ ++ + R VE + W ++V ++ T A A K E+
Sbjct: 186 LIDAYGKCGE-PNSSFCLFRSMVEKDAVSWTSMV----VTYTRASRIDDACKVFNEMPVK 240
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
AL + + N R E + +M +GV
Sbjct: 241 YTVSWAALISGFVKNGRCYEALEVFHQMIKEGV 273
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 203/331 (61%), Gaps = 3/331 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIA-WTSMISGYVQNELIAEAISLFGEMMAHGF 117
T ++ Y+ + ++ + LF + + SI WT++ISG+ QN+ +A++L+ EM +
Sbjct: 584 TSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREMRDNNI 643
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P TF + A ++ L G+++H + T ++ D + ++LV MYAKCG++ + +
Sbjct: 644 LPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSAAK 703
Query: 178 IFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+F + + D ISWNSMI+G + +G A AL V++ M + PD VTFLGVLTAC+HAG
Sbjct: 704 VFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAG 763
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
LV +G ++F++MVN Y + P DH+ +++LLGR G +++AEEF+ +L VEPN IW L
Sbjct: 764 LVSEGRQIFDNMVNYYSIHPRVDHHACMVDLLGRCGFLEEAEEFIDKLDVEPNAMIWANL 823
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + D RA ++L+EL+P N+ +V L N++A + E SLR+ M V
Sbjct: 824 LGACSI-HGDEKRGLRAAEKLIELEPQNSSPYVLLYNMHAGSGHWDEAKSLRRTMVQNEV 882
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+K PGCSWI+V ++F + D P ++I
Sbjct: 883 QKTPGCSWIVVDKTTNLFVASDMSHPSSDEI 913
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 119/225 (52%), Gaps = 1/225 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + A +FD + DR+ + W +++ Y QN +++ + LF EMM G P
Sbjct: 283 LINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPD 342
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T++ + + +LD GRQLH +K + +L + N+LV MYAK G + ++ + F
Sbjct: 343 EFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFE 402
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M YRD ISWN++++G +EA ++ M G+ PD V +L+AC + +++
Sbjct: 403 RMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEA 462
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
G + F+ + GL S+I++ + G ++DA + +P
Sbjct: 463 GLQ-FHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMP 506
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 148/284 (52%), Gaps = 5/284 (1%)
Query: 19 LNNFDDQSLNSMINGYVQAGQLEKAQELFDTVP---IRNKIAWTCMISGYLSAGQVFKAC 75
L+N D + ++I GYV+ G + A +LFD + + +++ +++ ++ G++ AC
Sbjct: 136 LDNLDTATFTALIGGYVRVGMFDDALQLFDEMQSGFVLDELVIVTVLNACVNLGKLDHAC 195
Query: 76 DLFDSMPD-RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
+LFD M + +AW MISG+ + EA+ + +M +G T A + A+ +
Sbjct: 196 ELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGL 255
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
L G +HG VK +E + + +SL++MY KC + D+ ++F + R+ + WN+++
Sbjct: 256 GDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTIL 315
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+ +G S+ + ++ M+ G PD T+ +L++CA +D G +L ++++
Sbjct: 316 GVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKR-F 374
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+++++ +AG +K+A + R+ N + LVG
Sbjct: 375 TDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVG 418
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 140/283 (49%), Gaps = 7/283 (2%)
Query: 20 NNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC----MISGYLSAGQVFKAC 75
N+ D+ + +S+++ L+ ++L T+ + C ++ Y AG + +A
Sbjct: 339 NDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEAR 398
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
F+ M RD+I+W +++ GYVQ E EA ++F M HG P A + A G++
Sbjct: 399 KQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIK 458
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L+ G Q HG+ VK + +L +SL+ MY+KCG I+D+ +I+S M +S N++I
Sbjct: 459 VLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIA 518
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G + EA+ + M GL P +TF ++ C + V G ++ +++ + GL
Sbjct: 519 GYAIKD-TKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKN-GLL 576
Query: 256 PGFDHY-ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G + S++ + + K+ + L + +W AL+
Sbjct: 577 CGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALI 619
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ ++ L +F+ + + L+ G +H +K +E D +L L+ YAKC +
Sbjct: 64 LPQTYTSLINSFSTTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCL 123
Query: 173 DDSYRIFSNMAYRDKI---SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
+ + +F++++ D + ++ ++I G G +AL +++ M + G D + + VL
Sbjct: 124 NSARTLFNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEM-QSGFVLDELVIVTVL 182
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS---IINLLGRAGKVKDAEEFVLRL 284
AC + G +D ELF+ M G + ++ +I+ G+ G K+A EF ++
Sbjct: 183 NACVNLGKLDHACELFDEM-------DGCGNVVAWNVMISGHGKRGYHKEAVEFYRKM 233
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 203/345 (58%), Gaps = 4/345 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y + G + A+E+FD + +N WT M++GY+S G++ KA DLFD P RD +
Sbjct: 244 NALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVV 303
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
WT+MI+GYVQ EA++LF EM G P L + L+ GR +H
Sbjct: 304 LWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYV 363
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ D ++ SL+ MYAKCG ++ S +F+ + +D SW S+I GL+ +G+ EAL
Sbjct: 364 RENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEAL 423
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++E M FG PD VTF+ +L AC+H GLV++G +LF+SM YG++P +HY I+L
Sbjct: 424 ELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDL 483
Query: 268 LGRAGKVKDAEEFVLRLPVEPNH---AIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
LGRAG + +AEE + +LP + N AI+G+ + C + + D+ R L ++ +
Sbjct: 484 LGRAGLLHEAEELIKKLPDQKNETIVAIYGSFLSACR-TYGNTDMGERIATALEKVKSSD 542
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKG 369
+ H L +IYA+ DR + + R +M+ +RK PGCS I V G
Sbjct: 543 SSLHSLLASIYASADRWEDASKTRSKMKDLHIRKVPGCSAIEVDG 587
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 92 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 151
+I + + ISLF ++ +G P N T+ + A+ +A QG ++H KT
Sbjct: 74 LIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFRQGTKIHAFVFKTG 133
Query: 152 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 211
+ D + NS + MYA+ G ID ++F ++ RD +SWN MI G R EA+ V++
Sbjct: 134 LDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQ 193
Query: 212 TM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIIN 266
M ++ T + LTACA + V+ G E ++ + ++ D + ++++
Sbjct: 194 RMRVDSNEKISEATVVSSLTACAASRNVEVGKE-----IHGFIIEKELDFTMRMGNALLD 248
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG---VCGLSKTDADVASRATKRLLELDPL 323
+ + G V A E + +E N W ++V CG D+ ++ R + L
Sbjct: 249 MYCKCGYVSVARE-IFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVL--- 304
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
A+ N Y +R E +L +EM+++GV+
Sbjct: 305 ----WTAMINGYVQFNRFDEAVALFEEMQVRGVK 334
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 27/288 (9%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM--PDRD 85
NS ++ Y + G+++ ++LFD + R+ ++W MISG + + +A ++F M +
Sbjct: 142 NSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNE 201
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEM--MAHGF---SPLNGTFAV---LFGAMGSVAYL 137
I+ +++S L A A S E+ HGF L+ T + L Y+
Sbjct: 202 KISEATVVSS-----LTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYV 256
Query: 138 DQGRQLH-GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
R++ GM K + + S+V+ Y CGE+D + +F RD + W +MI G
Sbjct: 257 SVAREIFDGMIEKNVNCW-----TSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMING 311
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQ 255
R EA+ ++E M G+ PD + +LT CA G ++ G W + V +
Sbjct: 312 YVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRW--IHDYVRENRIV 369
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
S+I + + G V+ + E L E + A W ++ +CGL+
Sbjct: 370 VDAVVGTSLIEMYAKCGCVEKSLEVFNGLK-EKDTASWTSI--ICGLA 414
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 214/369 (57%), Gaps = 6/369 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
DD +S+++ Y + + + +FD++ + I+WT MISGY +G+ +A +LF P
Sbjct: 145 DDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESP 204
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS---PLNGTFAVLFGAMGSVAYLDQ 139
++ AWT++ISG VQ+ +A+ LF EM G S PL + + GA + A +
Sbjct: 205 FKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPL--VLSSVVGACANSAVREL 262
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+Q+H + + YE L + N+LV MYAKC ++ + IF M +D +SW S+I+G +
Sbjct: 263 GKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQ 322
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
HG A EALT+Y+ M+ G+ P+ VTF+G++ AC+H GLV KG LF SMV +G++P
Sbjct: 323 HGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQ 382
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
HY +++L R+G + +AE + +PV+P+ W AL+ C + +A R LL+
Sbjct: 383 HYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACK-HHGNTKMAVRIADHLLD 441
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
L P + ++ L NIYA ++ +RK M +K V+K PG S + + VF +G+
Sbjct: 442 LKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEA 501
Query: 380 LEPHVEDIL 388
+P ++IL
Sbjct: 502 SQPMKDEIL 510
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 4/174 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A LFD++P +D +AW +++S + L +A S+ ++ G P
Sbjct: 49 LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPD 108
Query: 121 NGTFAVLFGA---MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
+ F+ L A +GSV ++ G+QLH + + + D ++++SLV MYAK D
Sbjct: 109 HFVFSSLIKACANLGSV-HVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRA 167
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+F ++ ISW +MI G + GR EAL ++ LY T G++ +
Sbjct: 168 VFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQS 221
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
++LH +K+ + +L+ Y KCG + D+ ++F + +D ++W +++ +
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
+A ++ +L GL PD F ++ ACA+ G V
Sbjct: 87 SNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSV 125
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 214/362 (59%), Gaps = 3/362 (0%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
++++ Y + G L+ A+ +FD + ++ W M++G G + +A +LF MP R+ ++
Sbjct: 119 ALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVS 178
Query: 89 WTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
WT+M+SGY+QN+ +A+ LF M SP T A + A ++ L+ G+++
Sbjct: 179 WTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYA 238
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHGRASEA 206
K + +L + N+++ MYAKCG+ID ++++F + +R+ SWNSMIMGL+ HG+ +A
Sbjct: 239 RKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKA 298
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ +Y+ ML G PD VTF+G+L AC H G+V+KG +F SM + + P +HY +++
Sbjct: 299 IQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVD 358
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 326
LLGRAG++ +A E + R+P++P+ IWG L+G C + ++A A + L L+P N
Sbjct: 359 LLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFH-GNVELAEVAAESLFVLEPWNPG 417
Query: 327 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVED 386
+V L NIYA+ + + LRK M+ + K G S+I G++H F DR +
Sbjct: 418 NYVILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIEEGGQLHKFIVEDRSHSESSE 477
Query: 387 IL 388
I
Sbjct: 478 IF 479
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 47/246 (19%)
Query: 94 SGYVQNELIA------EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+ ++ N+LI + +L+ +M HG SP TF LF S++ L G+ +H
Sbjct: 46 TTFLYNKLIQACSSKHQCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQF 105
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+K+ +++D+ +L+ MYAK G + + +F M+ ++ +WN+M+ G + G AL
Sbjct: 106 MKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERAL 165
Query: 208 TVY-----------ETMLE-----------FGLY----------PDTVTFLGVLTACAHA 235
++ TM+ GL+ P+ VT VL ACA+
Sbjct: 166 ELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANL 225
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDAEEFVLRLPVEPNHA 291
G ++ G V Y + GF + + N + + GK+ A + + N
Sbjct: 226 GALEIG-----QRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLC 280
Query: 292 IWGALV 297
W +++
Sbjct: 281 SWNSMI 286
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 213/370 (57%), Gaps = 8/370 (2%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA-----WTCMISGYLSAGQVFKACDL 77
D ++ S+++ + L+K +++ V I+N + +I+ Y G V +A +
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYV-IKNGMGSNLPVTNALINMYAKCGSVEEARLV 454
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
F +P +D ++W +MI GY QN L EA+ LF +M F P + T A + A +A L
Sbjct: 455 FSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAAL 513
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
D+GR++HG ++ Y DL + +LV MYAKCG + + +F + +D ISW MI G
Sbjct: 514 DKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGY 573
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
HG +EA++ + M G+ PD +F +L AC+H+GL+++GW+ FNSM N G++P
Sbjct: 574 GMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPK 633
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+HY +++LL R G + A +F+ +P++P+ IWG L+ C + D +A + + +
Sbjct: 634 LEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHH-DVKLAEKVAEHI 692
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
EL+P N +V L N+YA ++ E+ LRK M+ +G ++ PGCSWI V G+ ++F +G
Sbjct: 693 FELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 752
Query: 378 DRLEPHVEDI 387
+ P + I
Sbjct: 753 NSKHPQAKKI 762
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 2/238 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G V A +LFD + + D ++W SMI+G V N + +F +M+ G
Sbjct: 236 LIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVD 295
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A ++ L GR LHG VK + +++ N+L+ MY+KCG ++ + +F
Sbjct: 296 LTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFV 355
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +SW S+I G S+A+ +++ M G+ PD T ++ ACA + +DK
Sbjct: 356 KMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 415
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G ++ +S V G+ ++IN+ + G V++A ++PV+ + W ++G
Sbjct: 416 GRDV-HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIG 471
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 137/282 (48%), Gaps = 41/282 (14%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN-KIAWTC 60
Y FG ++ A N + L+ D S NSMING V G E+F + I ++ T
Sbjct: 240 YFKFGGVESAHNLFD-ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTT 298
Query: 61 MIS--------GYLSAGQVF-----KAC-------------------------DLFDSMP 82
++S G LS G+ KAC ++F M
Sbjct: 299 LVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 358
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D ++WTS+I+ YV+ L ++AI LF EM + G P T + A + LD+GR
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD 418
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H +K +L + N+L++MYAKCG ++++ +FS + +D +SWN+MI G S +
Sbjct: 419 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLL 478
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+EAL ++ M + PD +T VL ACA +DKG E+
Sbjct: 479 PNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREI 519
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 111/224 (49%), Gaps = 9/224 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y++ G + + +FD + + W ++S Y + E++SLF +M G TF
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 198
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ ++ + + +++HG +K + + + NSL++ Y K G ++ ++ +F ++
Sbjct: 199 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 258
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
D +SWNSMI G +G + L ++ ML G+ D T + VL ACA+ G + G L
Sbjct: 259 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRAL 318
Query: 245 FNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRL 284
+ +G++ F + +++++ + G + A E +++
Sbjct: 319 -----HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 357
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L+ G+++H + + D L LV MY CG++ +IF + WN ++
Sbjct: 110 LEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 169
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ G E++++++ M + G+ + TF VL A G V + V+ Y L+
Sbjct: 170 YAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC-----KRVHGYVLKL 224
Query: 257 GFDHYISIINLLGRA----GKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GF +++N L A G V+ A L EP+ W +++ C
Sbjct: 225 GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGC 271
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 197/359 (54%), Gaps = 1/359 (0%)
Query: 5 FGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISG 64
+G++D +E N D N++I+ Y + ++ A+ +FD + RN ++W MI G
Sbjct: 193 WGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMG 252
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y AG + A LFD MP RD I+WTSMIS Y Q +A+ LF EMM P T
Sbjct: 253 YGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITV 312
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A + A + LD G +H K D+ + N+L+ MY KCG ++ +F M
Sbjct: 313 ASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGK 372
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
RD +SW S+I GL+ +G A AL ++ ML G+ P TF+GVL ACAHAG+VDKG E
Sbjct: 373 RDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEY 432
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
F SM YGL P HY +++LL R+G + A EF+ R+P++P+ +W L+ +
Sbjct: 433 FESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQV-H 491
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
+ +A ATK+LLE DP N+ ++ N YA ++R ++ +R+ M V K S
Sbjct: 492 GNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASS 550
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 14/272 (5%)
Query: 44 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 103
+EL T PI + + S LS + KA +LF +P W MI G+ Q
Sbjct: 3 KELLPTDPIS---IFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPI 59
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 163
EAI + M + N T+ L A ++ + +H +K ++ DL + N+L+
Sbjct: 60 EAIRNYNLMYSQALFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNALI 118
Query: 164 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
YA E+ + ++F M+ RD +SWNS+I G R SE L V+E M + D V
Sbjct: 119 HGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAV 178
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGL-QPGFDHYI--SIINLLGRAGKVKDAEEF 280
T + V+ AC G W + ++M+ + D Y+ ++I++ GR V A
Sbjct: 179 TMVKVVLACTVLG----EWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRV 234
Query: 281 VLRLPVEPNHAIWGALVGVCGLSKTDADVASR 312
R+ + N W A+ + G K VA+R
Sbjct: 235 FDRMR-DRNMVSWNAM--IMGYGKAGNLVAAR 263
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 217/375 (57%), Gaps = 10/375 (2%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA-----WTCMISGYLSAGQVFKACDL 77
D ++ S+++ + L+K +++ V I+N + +I+ Y G V +A +
Sbjct: 671 DIYTVTSIVHACACSSSLDKGRDVHSYV-IKNGMGSNLPVTNALINMYAKCGSVEEARLV 729
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
F +P +D ++W +MI GY QN L EA+ LF +M F P + T A + A +A L
Sbjct: 730 FSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAAL 788
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
D+GR++HG ++ Y DL + +LV MYAKCG + + +F + +D ISW MI G
Sbjct: 789 DKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGY 848
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
HG +EA++ + M G+ PD +F +L AC+H+GL+++GW+ FNSM N G++P
Sbjct: 849 GMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPK 908
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+HY +++LL R G + A +F+ +P++P+ IWG L+ C + D +A + + +
Sbjct: 909 LEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHH-DVKLAEKVAEHI 967
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
EL+P N +V L N+YA ++ E+ LRK M+ +G ++ PGCSWI V G+ ++F +G
Sbjct: 968 FELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 1027
Query: 378 DRLEPHVE--DILLQ 390
+ P + D+LL+
Sbjct: 1028 NSKHPQAKRIDVLLR 1042
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 121/238 (50%), Gaps = 2/238 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G V A +LFD + + D ++W SMI+G V N + +F +M+ G
Sbjct: 511 LIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVD 570
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A ++ L GR LHG VK + +++ N+L+ MY+KCG ++ + +F
Sbjct: 571 LTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFV 630
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +SW S I G S+A+ +++ M G+ PD T ++ ACA + +DK
Sbjct: 631 KMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 690
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G ++ +S V G+ ++IN+ + G V++A ++PV+ + W ++G
Sbjct: 691 GRDV-HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIG 746
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 136/282 (48%), Gaps = 41/282 (14%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN-KIAWTC 60
Y FG ++ A N + L+ D S NSMING V G E+F + I ++ T
Sbjct: 515 YFKFGGVESAHNLFD-ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTT 573
Query: 61 MIS--------GYLSAGQVF-----KAC-------------------------DLFDSMP 82
++S G LS G+ KAC ++F M
Sbjct: 574 LVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 633
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D ++WTS I+ YV+ L ++AI LF EM + G P T + A + LD+GR
Sbjct: 634 DTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD 693
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H +K +L + N+L++MYAKCG ++++ +FS + +D +SWN+MI G S +
Sbjct: 694 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSL 753
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+EAL ++ M + PD +T VL ACA +DKG E+
Sbjct: 754 PNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREI 794
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y++ G + + +FD + + W ++S Y + E++SLF +M G TF
Sbjct: 414 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 473
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ ++ + + +++HG +K + + + NSL++ Y K G ++ ++ +F ++
Sbjct: 474 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 533
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
D +SWNSMI G +G + L ++ ML G+ D T + VL A A+ G + G L
Sbjct: 534 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRAL 593
Query: 245 FNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRL 284
+ +G++ F + +++++ + G + A E +++
Sbjct: 594 -----HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L+ G+++H + + D L LV MY CG++ +IF + WN ++
Sbjct: 385 LEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 444
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ G E++++++ M + G+ + TF VL A G V + V+ Y L+
Sbjct: 445 YAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC-----KRVHGYVLKL 499
Query: 257 GFDHYISIINLLGRA----GKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GF +++N L A G V+ A L EP+ W +++ C
Sbjct: 500 GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGC 546
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 223/418 (53%), Gaps = 41/418 (9%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTV 50
+YS G M+ A L N + FD S N+M++G+ + +A LF D +
Sbjct: 443 VYSKGGKMEEA-ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQI 501
Query: 51 PIRNKI-AWTCM------------------------ISG----YLSAGQVFKACDLFDSM 81
N A C+ ISG YL G++ A +F+ +
Sbjct: 502 TFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQI 561
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P D +AWT++ISG V+N +A+ + +M G P TFA L A + L+QG+
Sbjct: 562 PSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGK 621
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+H +K +D + SLV MYAKCG I+D+Y +F M R WN+MI+GL+ HG
Sbjct: 622 QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A EAL + M G+ PD VTF+GVL+AC+H+GL ++ F+SM +YG++P +HY
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHY 741
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++ L RAG +++AE+ V +P E + ++ L+ C + + D + R ++L +D
Sbjct: 742 SCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRV-QGDKETGERVAEKLFTMD 800
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
P ++ +V L NIYAA ++ S R M+ V+K PG SWI +K +VH+F +GDR
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDR 858
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 125/241 (51%), Gaps = 6/241 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G++ +A LF + D +W +M+ G+ ++ EA+ LF M G
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
TFA A G + L QG+Q+H + +K + YDL + + ++ MY KCGE+ + ++
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+ + D ++W ++I G ++G +AL Y M G+ PD TF ++ AC+ +
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
++G ++ N L FD ++ S++++ + G ++DA R+ + A+W A+
Sbjct: 618 EQGKQIH---ANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAM 673
Query: 297 V 297
+
Sbjct: 674 I 674
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 51/297 (17%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG------------------- 69
+++N Y + ++ +A+ LFD +P+R+ + W M+ Y+ G
Sbjct: 162 ALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221
Query: 70 ---------------QVFK---------ACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
VF+ A LF D D W +S Y+Q EA
Sbjct: 222 DCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEA 281
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ F +M+ + T+ V+ + S+ +L+ G+Q+HG V+ ++ + + NS ++M
Sbjct: 282 VDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINM 341
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
Y K G ++ + R+F M D ISWN++I G + G +L ++ +L GL PD T
Sbjct: 342 YVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTI 401
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPG--FDHYIS--IINLLGRAGKVKDAE 278
VL AC+ +++ + V++ L+ G D ++S +I++ + GK+++AE
Sbjct: 402 TSVLRACSS---LEESY-CVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE 454
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+ Y+ AG V A +F M + D I+W ++ISG ++ L ++ LF +++ G P
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 122 GTFAVLFGAMGSV--AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T + A S+ +Y GRQ+H +K D + +L+ +Y+K G+++++ +F
Sbjct: 399 FTITSVLRACSSLEESYC-VGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLF 457
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
N D SWN+M+ G + EAL ++ M E G D +TF A +
Sbjct: 458 HNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQ 517
Query: 240 KGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+G ++ ++ ++ +D ++ I+++ + G++K A + ++P P+ W ++
Sbjct: 518 QGKQIHAVVIK---MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVI 573
Query: 298 GVC 300
C
Sbjct: 574 SGC 576
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 61 MISGYLSAGQVFKACDLFDSMP--DRDSIAWTSMISGYVQN------ELIAEAISLFGEM 112
+I+ Y G +F A LFD P DRD + + ++++ Y E EA +F +
Sbjct: 54 LITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLL 113
Query: 113 -------MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
H SPL +L+G+ + L G VK ++D+ + +LV++
Sbjct: 114 RQSVMLTTRHTLSPL-FKLCLLYGSPSA------SEALQGYAVKIGLQWDVFVAGALVNI 166
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
YAK I ++ +F M RD + WN M+ + G E L ++ GL PD V+
Sbjct: 167 YAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSV 226
Query: 226 LGVLTACAHAGLVDKGWE 243
+L + ++ E
Sbjct: 227 RTILMGVGKKTVFERELE 244
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 223/418 (53%), Gaps = 41/418 (9%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTV 50
+YS G M+ A L N + FD S N+M++G+ + +A LF D +
Sbjct: 443 VYSKGGKMEEA-ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQI 501
Query: 51 PIRNKI-AWTCM------------------------ISG----YLSAGQVFKACDLFDSM 81
N A C+ ISG YL G++ A +F+ +
Sbjct: 502 TFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQI 561
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P D +AWT++ISG V+N +A+ + +M G P TFA L A + L+QG+
Sbjct: 562 PSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGK 621
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+H +K +D + SLV MYAKCG I+D+Y +F M R WN+MI+GL+ HG
Sbjct: 622 QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A EAL + M G+ PD VTF+GVL+AC+H+GL ++ F+SM +YG++P +HY
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHY 741
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++ L RAG +++AE+ V +P E + ++ L+ C + + D + R ++L +D
Sbjct: 742 SCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRV-QGDKETGERVAEKLFTMD 800
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
P ++ +V L NIYAA ++ S R M+ V+K PG SWI +K +VH+F +GDR
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDR 858
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 125/241 (51%), Gaps = 6/241 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G++ +A LF + D +W +M+ G+ ++ EA+ LF M G
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
TFA A G + L QG+Q+H + +K + YDL + + ++ MY KCGE+ + ++
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+ + D ++W ++I G ++G +AL Y M G+ PD TF ++ AC+ +
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
++G ++ N L FD ++ S++++ + G ++DA R+ + A+W A+
Sbjct: 618 EQGKQIH---ANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAM 673
Query: 297 V 297
+
Sbjct: 674 I 674
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 51/297 (17%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG------------------- 69
+++N Y + ++ +A+ LFD +P+R+ + W M+ Y+ G
Sbjct: 162 ALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221
Query: 70 ---------------QVFK---------ACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
VF+ A LF D D W +S Y+Q EA
Sbjct: 222 DCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEA 281
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ F +M+ + T+ V+ + S+ +L+ G+Q+HG V+ ++ + + NS ++M
Sbjct: 282 VDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINM 341
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
Y K G ++ + R+F M D ISWN++I G + G +L ++ +L GL PD T
Sbjct: 342 YVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTI 401
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPG--FDHYIS--IINLLGRAGKVKDAE 278
VL AC+ +++ + V++ L+ G D ++S +I++ + GK+++AE
Sbjct: 402 TSVLRACSS---LEESY-CVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE 454
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+ Y+ AG V A +F M + D I+W ++ISG ++ L ++ LF +++ G P
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 122 GTFAVLFGAMGSV--AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T + A S+ +Y GRQ+H +K D + +L+ +Y+K G+++++ +F
Sbjct: 399 FTITSVLRACSSLEESYC-VGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLF 457
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
N D SWN+M+ G + EAL ++ M E G D +TF A +
Sbjct: 458 HNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQ 517
Query: 240 KGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+G ++ ++ ++ +D ++ I+++ + G++K A + ++P P+ W ++
Sbjct: 518 QGKQIHAVVIK---MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVI 573
Query: 298 GVC 300
C
Sbjct: 574 SGC 576
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 61 MISGYLSAGQVFKACDLFDSMP--DRDSIAWTSMISGYVQN------ELIAEAISLFGEM 112
+I+ Y G +F A LFD P DRD + + ++++ Y E EA +F +
Sbjct: 54 LITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLL 113
Query: 113 -------MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
H SPL +L+G+ + L G VK ++D+ + +LV++
Sbjct: 114 RQSVMLTTRHTLSPL-FKLCLLYGSPSA------SEALQGYAVKIGLQWDVFVAGALVNI 166
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
YAK I ++ +F M RD + WN M+ + G E L ++ GL PD V+
Sbjct: 167 YAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSV 226
Query: 226 LGVLTACAHAGLVDKGWE 243
+L + ++ E
Sbjct: 227 RTILMGVGKKTVFERELE 244
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 223/418 (53%), Gaps = 41/418 (9%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTV 50
+YS G M+ A L N + FD S N+M++G+ + +A LF D +
Sbjct: 443 VYSKGGKMEEA-ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQI 501
Query: 51 PIRNKI-AWTCM------------------------ISG----YLSAGQVFKACDLFDSM 81
N A C+ ISG YL G++ A +F+ +
Sbjct: 502 TFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQI 561
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P D +AWT++ISG V+N +A+ + +M G P TFA L A + L+QG+
Sbjct: 562 PSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGK 621
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+H +K +D + SLV MYAKCG I+D+Y +F M R WN+MI+GL+ HG
Sbjct: 622 QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A EAL + M G+ PD VTF+GVL+AC+H+GL ++ F+SM +YG++P +HY
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHY 741
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++ L RAG +++AE+ V +P E + ++ L+ C + + D + R ++L +D
Sbjct: 742 SCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRV-QGDKETGERVAEKLFTMD 800
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
P ++ +V L NIYAA ++ S R M+ V+K PG SWI +K +VH+F +GDR
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDR 858
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 125/241 (51%), Gaps = 6/241 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G++ +A LF + D +W +M+ G+ ++ EA+ LF M G
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
TFA A G + L QG+Q+H + +K + YDL + + ++ MY KCGE+ + ++
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+ + D ++W ++I G ++G +AL Y M G+ PD TF ++ AC+ +
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
++G ++ N L FD ++ S++++ + G ++DA R+ + A+W A+
Sbjct: 618 EQGKQIH---ANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAM 673
Query: 297 V 297
+
Sbjct: 674 I 674
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 51/297 (17%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG------------------- 69
+++N Y + ++ +A+ LFD +P+R+ + W M+ Y+ G
Sbjct: 162 ALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221
Query: 70 ---------------QVFK---------ACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
VF+ A LF D D W +S Y+Q EA
Sbjct: 222 DCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEA 281
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ F +M+ + T+ V+ + S+ +L+ G+Q+HG V+ ++ + + NS ++M
Sbjct: 282 VDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINM 341
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
Y K G ++ + R+F M D ISWN++I G + G +L ++ +L GL PD T
Sbjct: 342 YVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTI 401
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPG--FDHYIS--IINLLGRAGKVKDAE 278
VL AC+ +++ + V++ L+ G D ++S +I++ + GK+++AE
Sbjct: 402 TSVLRACSS---LEESY-CVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE 454
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+ Y+ AG V A +F M + D I+W ++ISG ++ L ++ LF +++ G P
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 122 GTFAVLFGAMGSV--AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T + A S+ +Y GRQ+H +K D + +L+ +Y+K G+++++ +F
Sbjct: 399 FTITSVLRACSSLEESYC-VGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLF 457
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
N D SWN+M+ G + EAL ++ M E G D +TF A +
Sbjct: 458 HNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQ 517
Query: 240 KGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+G ++ ++ ++ +D ++ I+++ + G++K A + ++P P+ W ++
Sbjct: 518 QGKQIHAVVIK---MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVI 573
Query: 298 GVC 300
C
Sbjct: 574 SGC 576
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 61 MISGYLSAGQVFKACDLFDSMP--DRDSIAWTSMISGYVQN------ELIAEAISLFGEM 112
+I+ Y G +F A LFD P DRD + + ++++ Y E EA +F +
Sbjct: 54 LITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLL 113
Query: 113 -------MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
H SPL +L+G+ + L G VK ++D+ + +LV++
Sbjct: 114 RQSVMLTTRHTLSPL-FKLCLLYGSPSA------SEALQGYAVKIGLQWDVFVAGALVNI 166
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
YAK I ++ +F M RD + WN M+ + G E L ++ GL PD V+
Sbjct: 167 YAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSV 226
Query: 226 LGVLTACAHAGLVDKGWE 243
+L + ++ E
Sbjct: 227 RTILMGVGKKTVFERELE 244
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 206/366 (56%), Gaps = 1/366 (0%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
D ++IN Y G ++ A++++D + ++ I T M+SGY G V A +FD M
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+RD + W++MISGY +++ EA+ LF EM+ P T + A V L Q
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+H ++ + L + N+L+ MYAKCG + + +F NM ++ ISW+SMI + HG
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 434
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A A+ ++ M E + P+ VTF+GVL AC HAGLV++G +LF+SM+N +G+ P +HY
Sbjct: 435 NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHY 494
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++L RA ++ A E + +P PN IWG+L+ C + +A++ A KRLLEL+
Sbjct: 495 GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQV-HGEAELGEFAAKRLLELE 553
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
P + V L NIYA R ++ +RK M KG+ K S I + +VH+F DR
Sbjct: 554 PDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYH 613
Query: 382 PHVEDI 387
++I
Sbjct: 614 KQSDEI 619
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 151/322 (46%), Gaps = 28/322 (8%)
Query: 13 NALEGNLNNFDDQSLNS-MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQV 71
+ L L DD + + +I Y ++ A+ LFD + + +AW +I GY G
Sbjct: 144 HGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHY 203
Query: 72 FKACDLFDSMPDR----DSIAWTSMIS--GYVQNELIAEAISLFGEMMAHGFSPLNGTFA 125
A LF+ M DS+ +++S G+ N I F + +G++ +
Sbjct: 204 DDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEF--VKDNGYAIDSHLQT 261
Query: 126 VLFGAMGSVAYLDQGRQLH-GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L + +D R+++ G+ K LI+ +++S YAK G + D+ IF M
Sbjct: 262 ALINMYANCGAMDLARKIYDGLSSK-----HLIVSTAMLSGYAKLGMVKDARFIFDQMIE 316
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG-LVDKGWE 243
RD + W++MI G ++ + EAL +++ ML+ PD +T L V++AC+H G L W
Sbjct: 317 RDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW- 375
Query: 244 LFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+++Y + GF +S+ I++ + G + A E +P N W +++
Sbjct: 376 -----IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINA 429
Query: 300 CGLSKTDADVASRATKRLLELD 321
+ +AD A + +R+ E++
Sbjct: 430 FAM-HGNADSAIKLFRRMKEVN 450
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 37/293 (12%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVA 135
+F +P+ + ++ ++ + I L+ + A + F+ +F L A+ V+
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+ G ++HG+ K + D ++ L++MYA C I D+ +F M + D ++WN +I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG-----------LVDKGW-- 242
G +G +AL ++E M + PD+V VL+AC HAG + D G+
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255
Query: 243 --ELFNSMVNSYGLQPGFD------------HYISIINLL---GRAGKVKDAEEFVLRLP 285
L +++N Y D H I +L + G VKDA F+
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDA-RFIFDQM 314
Query: 286 VEPNHAIWGALVGVCGLSKTDADVASRATKRLLE-LDPLNAPGHVALCNIYAA 337
+E + W A++ ++D A K E L + P + + ++ +A
Sbjct: 315 IERDLVCWSAMIS----GYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISA 363
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 205/372 (55%), Gaps = 14/372 (3%)
Query: 29 SMINGYVQA-GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
S+++ Y + G L A ++FD + RN + +T ++SGYL G V K +FD M DRD
Sbjct: 140 SLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVP 199
Query: 88 AWTSMISGYVQNELIAEAISLFGEMM----------AHGFSPLNGTFAVLFGAMGSVAYL 137
AW ++ISG QN +E I LF EM+ G P T + A G L
Sbjct: 200 AWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGML 259
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
G+ +HG + + D + N+LV MY KCG ++ + ++F + SWNSMI
Sbjct: 260 QLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCY 319
Query: 198 SDHGRASEALTVYETMLEFG--LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
+ HG+ +A+T +E M+E G + PD VTF+G+L AC H GLV++G F M+ YG++
Sbjct: 320 ALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIE 379
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
P HY +I+LLGRAG+ +A + V + +EP+ +WG+L+ C + D+A A K
Sbjct: 380 PQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGR-TDLAEFAAK 438
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFS 375
+L+E+DP N L NIY + E+ ++ +++ + K PGCSWI V +VH F
Sbjct: 439 KLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVDDKVHQFF 498
Query: 376 SGDRLEPHVEDI 387
S D+ P E++
Sbjct: 499 SLDQSNPKTEEL 510
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 208/367 (56%), Gaps = 7/367 (1%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP-DRDSIA 88
+++GY + G A++LFD +P ++ I++T M+ Y G++ +A LFD M +RD +
Sbjct: 159 LVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVV 218
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
W MI GY QN E + LF M+ P T + + G V L+ GR +H +
Sbjct: 219 WNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSY-I 277
Query: 149 KT----IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
K + ++ + +LV MY KCG ++D+ ++F + +D ++WNSMIMG + +G +
Sbjct: 278 KNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSE 337
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EAL ++ M G+ P VTF+ +LTAC H+GLV KGWE+FN M N Y ++P +H+ +
Sbjct: 338 EALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVEHFGCM 397
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
+NLLGRAG++++A + V + ++P+ IWG L+ C L + + + LL D +
Sbjct: 398 VNLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRL-HNNISLGEEIAEFLLSNDLAS 456
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
+ +V L NIYAA +R M+ GV K PGCS I V RVH F +GD P
Sbjct: 457 SGTYVLLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCSIIEVNNRVHEFIAGDLKHPKS 516
Query: 385 EDILLQI 391
+DI L +
Sbjct: 517 KDIYLML 523
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 44/252 (17%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y S G + + LF+ +RD WTS+I + Q++L +A+S + +M+ H P TF
Sbjct: 66 YSSLGHLNYSVTLFNRTRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTF 125
Query: 125 AVLFG-----------------AMGSVAY----LDQGRQLHGMQVKTIYEYDLILENSLV 163
+ L + S Y L G G + +D + E SL+
Sbjct: 126 SSLLNGSTIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLI 185
Query: 164 SM------YAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 216
S YAK G++ ++ +F M RD + WN MI G + +G +E L ++ ML
Sbjct: 186 SFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVE 245
Query: 217 GLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFD--------HYISIINL 267
+ P+ +T L VL++C G ++ G W V+SY ++ G D +++++
Sbjct: 246 KVKPNVITLLPVLSSCGQVGALESGRW------VHSY-IKNGKDGVVGVEVRVGTALVDM 298
Query: 268 LGRAGKVKDAEE 279
+ G ++DA +
Sbjct: 299 YCKCGSLEDARK 310
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 205/364 (56%), Gaps = 7/364 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D+ SL S++ + G LE + + V R N + +IS Y G++ + +F
Sbjct: 218 DEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF 277
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
D MP RD I W + IS Y QN + EAISLF M +G P T + A S+ LD
Sbjct: 278 DGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALD 337
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
G+Q+ ++D+ + +L+ MYAKCG ++ + R+F++M ++ SWN+MI L+
Sbjct: 338 LGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALA 397
Query: 199 DHGRASEALTVYETMLEFG--LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
HG+A EAL+++E M + G P+ +TF+ +L+AC HAGLVD+G+ LF+ M +GL P
Sbjct: 398 SHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVP 457
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
+HY +++LL RAG + +A + + ++P +P++ GAL C K + D+ R +
Sbjct: 458 KIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQ-RKKNVDIGERVIQM 516
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
LLELDP N+ ++ IY + + +R MR GV K PGCSWI V ++ F S
Sbjct: 517 LLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLS 576
Query: 377 GDRL 380
GD L
Sbjct: 577 GDGL 580
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 132/243 (54%), Gaps = 11/243 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSP 119
M++ Y G+ A +FD + ++D ++W S++SGY + EA+ +FG + GF P
Sbjct: 158 MVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEP 217
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ + GA G + L+ GR + G V+ + + + ++L+SMY+KCGE+ S RIF
Sbjct: 218 DEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF 277
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
M RD I+WN+ I + +G A EA++++ +M E G+ P+ VT VL+ACA G +D
Sbjct: 278 DGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALD 337
Query: 240 KGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
G ++ + Y G H I ++I++ + G ++ A+ +P N A W A
Sbjct: 338 LGKQM-----DEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP-RKNDASWNA 391
Query: 296 LVG 298
++
Sbjct: 392 MIS 394
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 105 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 164
+ L+ +M SP N TF +F A ++ + R H K + D NS+V+
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTV 223
MY +CGE + ++F + +D +SWNS++ G + G A EA+ V+ + E G PD +
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 224 TFLGVLTACAHAGLVDKG 241
+ + VL AC G ++ G
Sbjct: 221 SLVSVLGACGELGDLELG 238
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 213/364 (58%), Gaps = 9/364 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
++IN Y G +E+A+ +FD + R+ ++W ++ GY+ G A ++F+ +P R+ +
Sbjct: 153 TNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVV 212
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+WT+MI+GY QN EA+SLFG+M + A + L GR +H
Sbjct: 213 SWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYV 272
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ + + L N+L+ MYA CG ID++YR+F+ M+++ +SW +IM + G EAL
Sbjct: 273 QERQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEAL 332
Query: 208 TVYETML-----EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
+++ ML + G+ PD TF+ L AC+HAG V++G +F SM++++ + +HY
Sbjct: 333 DLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYG 392
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL-ELD 321
+++LL RAG + +A + +P +PN AIWGAL+G C + K ++++ASR L+ ELD
Sbjct: 393 CMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHK-NSELASRVANTLVAELD 451
Query: 322 PLN-APGH-VALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
+ A G+ V L NIYA R ++ ++R++M GV+K PG SWI + G VH F GD
Sbjct: 452 STDQAAGYLVLLSNIYAFAGRWQDVIAVRQKMIEMGVKKPPGQSWIQIYGVVHNFVVGDM 511
Query: 380 LEPH 383
H
Sbjct: 512 THKH 515
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----P 82
+ +++ Y +G+L+ A +LF + W MI Y S+ +K+ ++ M
Sbjct: 51 IAKLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNAC 110
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP---LNGTFAVLFGAMGSVAYLDQ 139
+ D ++ ++S V+ L+ E L G ++A G+ +N + G V +Q
Sbjct: 111 EPDGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGV---EQ 167
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
R + + + ++ NSL+ Y KCG+ D + +F + R+ +SW +MI G +
Sbjct: 168 ARYV----FDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQ 223
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+G+ EAL+++ M + D V + VL+ACA G
Sbjct: 224 NGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELG 260
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Query: 161 SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
L+S YA G++ ++++F + WN MI + +++ Y M+ P
Sbjct: 53 KLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEP 112
Query: 221 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
D T+ +L+AC GLV +G E + +V + G ++IN G V+ A +
Sbjct: 113 DGFTYSFLLSACVRGGLVREG-EQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQA-RY 170
Query: 281 VLRLPVEPNHAIWGA-LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 339
V + + W + LVG DA A E+ N + YA N
Sbjct: 171 VFDDMTQRSVVSWNSLLVGYVKCGDFDA-----ARNVFEEIPVRNVVSWTTMIAGYAQNG 225
Query: 340 RHIELTSLRKEMR 352
+ +E SL +MR
Sbjct: 226 KCVEALSLFGQMR 238
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 204/335 (60%), Gaps = 3/335 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y G++ +A +F+ +P+RD ++ T++ISGY Q L EA+ LF + G
Sbjct: 180 SSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMK 239
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
T+ + A+ +A LD G+Q+H +++ ++L+NSL+ MY+KCG + S RI
Sbjct: 240 SNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRI 299
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGL 237
F M R ISWN+M++G S HG E L ++ M E + PD+VT L VL+ C+H GL
Sbjct: 300 FDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGL 359
Query: 238 VDKGWELFNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
DKG +FN M + ++P +HY +++LLGR+G+V++A EF+ ++P EP AIWG+L
Sbjct: 360 EDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSL 419
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + ++ D+ A ++LLE++P NA +V L N+YA+ R +++SLR M K V
Sbjct: 420 LGACRV-HSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTV 478
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
K PG S I + +H F + DR P E+I +++
Sbjct: 479 TKEPGRSSIELDQVLHTFHASDRSHPRREEICMKV 513
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 123/235 (52%), Gaps = 4/235 (1%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQE----LFDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
N ++ N+++N V + Q + T + + T +I Y + A +
Sbjct: 37 NMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHN 96
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD MP+R+ ++WT+MIS Y Q ++A++LF +M+ G P TFA + + S
Sbjct: 97 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLG 156
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
GRQ+H + +K YE + + +SL+ MYAK G+I ++ +F + RD +S ++I G
Sbjct: 157 FILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISG 216
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
+ G EAL ++ + G+ + VT+ GVLTA + +D G ++ N ++ S
Sbjct: 217 YAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRS 271
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 201/329 (61%), Gaps = 3/329 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G++ +A +F+ +P+RD ++ T++ISGY Q L EA+ LF + G T+
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 61
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A+ +A LD G+Q+H +++ ++L+NSL+ MY+KCG + S RIF M
Sbjct: 62 TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE 121
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
R ISWN+M++G S HG E L ++ M E + PD+VT L VL+ C+H GL DKG
Sbjct: 122 RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLN 181
Query: 244 LFNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+FN M + ++P +HY +++LLGR+G+V++A EF+ ++P EP AIWG+L+G C +
Sbjct: 182 IFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRV 241
Query: 303 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 362
++ D+ A ++LLE++P NA +V L N+YA+ R +++SLR M K V K PG
Sbjct: 242 -HSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGR 300
Query: 363 SWILVKGRVHVFSSGDRLEPHVEDILLQI 391
S I + +H F + DR P E+I +++
Sbjct: 301 SSIELDQVLHTFHASDRSHPRREEICMKV 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
MYAK G+I ++ +F + RD +S ++I G + G EAL ++ + G+ + VT
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNS 251
+ GVLTA + +D G ++ N ++ S
Sbjct: 61 YTGVLTALSGLAALDLGKQVHNHVLRS 87
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 222/391 (56%), Gaps = 8/391 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKI 56
+Y+ G +D A +G +N + S N MI+GYV+ G+ ++ F+ + + +++
Sbjct: 207 LYAKCGDIDRARWLFDGMVNK-NLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQV 265
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
+ +++ Y +G+V A ++FD + +D I WT+MI GY Q+ +A+ LF EM+
Sbjct: 266 TVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLRGN 325
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
P + T + + + +A L G+ +HG + + ++++ ++LV MY KCG D+
Sbjct: 326 VRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDAR 385
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
IF M ++ I WNSMI+G + +G A EALT+YE ML+ PD ++F+GVL+AC +
Sbjct: 386 VIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTN 445
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+V +G + F+S ++ G+ P DHY +I LLGR+G + A + + +P +P+ IW AL
Sbjct: 446 MVKEGRKHFDS-ISEQGMTPTLDHYACMIILLGRSGNIDKALDLIKGMPHKPDCRIWSAL 504
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+ VC SK D A A + +LDP NA ++ L N+YAA R ++ +R M+ K
Sbjct: 505 LSVC--SKGDIKTAEVAANHIFQLDPHNAGSYIMLSNLYAACGRWKDVAVVRSLMKSKNA 562
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+K SW+ + +VH F S D P +E I
Sbjct: 563 KKFSAYSWVEIGKKVHRFVSDDHNHPEMEKI 593
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 137/277 (49%), Gaps = 8/277 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +++ Y + G++ AQ+LFD + R+ +W ++S Y G V +FD M RDS+
Sbjct: 70 NQLLHLYAKCGKISDAQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSV 129
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
++ +MI+ + N L +A+ F M GF P ++ A + G+Q+HG
Sbjct: 130 SYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRV 189
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
V +E ++ + N++ +YAKCG+ID + +F M ++ +SWN MI G G+ E +
Sbjct: 190 VVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECI 249
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+ + M GL PD VT VL A +G VD +F+ + + + ++I
Sbjct: 250 SFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEIC-----WTTMIVG 304
Query: 268 LGRAGKVKDAEEF---VLRLPVEPNHAIWGALVGVCG 301
++G+ +DA +LR V P+ +V C
Sbjct: 305 YAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCA 341
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 137 LDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+Q ++L M+++ D + N L+ +YAKCG+I D+ ++F M+ RD SWN+++
Sbjct: 46 FNQAKRLQSHMELQLFQPTDSFIHNQLLHLYAKCGKISDAQQLFDKMSKRDIYSWNALLS 105
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
+ G + V++ M D+V++ ++ A L K F M G +
Sbjct: 106 AYAKVGLVEDLNLVFDRM----ACRDSVSYNTMIACFASNWLSGKALRFFVRMQED-GFR 160
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPV---EPNHAIWGA---LVGVCG 301
P Y++ + + + ++ R+ V E N +W A L CG
Sbjct: 161 PTQYSYVNALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCG 212
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 199/325 (61%), Gaps = 2/325 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
++ A + +I Y +V A +F+ + D+D + WT+M SGY Q E++ L+ +
Sbjct: 478 DEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQ 537
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
P TFA + A ++A L G+Q H +K ++ D + N+LV MYAK G I+
Sbjct: 538 MSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIE 597
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
++++ F + ++D WNSMI + HG A +AL V+E M+ GL P+ VTF+GVL+AC+
Sbjct: 598 EAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACS 657
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
H GL+D G++ F+SM + +G++PG +HY+ +++LLGRAGK+ +A+EF+ ++P++ +W
Sbjct: 658 HTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVW 716
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
+L+ C +S + ++ + A + + +P ++ +V L NI+A+ + + LR++M I
Sbjct: 717 RSLLSACRVS-GNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDI 775
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGD 378
GV K PGCSWI V +H F + D
Sbjct: 776 SGVVKEPGCSWIEVNNEIHKFIAKD 800
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 124/241 (51%), Gaps = 14/241 (5%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I Y +V LFD M D++ ++WT++I+G +QN +A+ LF EM G++P
Sbjct: 284 IDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDA 343
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
+ + GS+ L++GRQ+H +K + D ++N L+ MYAKC + D+ ++F+
Sbjct: 344 FGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNL 403
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT----VTFLGVLTACAHAGL 237
MA D +S+N+MI G S + EAL ++ M L T V+ LGV + H L
Sbjct: 404 MAAIDLVSYNAMIEGYSRQDKLCEALDLFREM-RLSLSSPTLLIFVSLLGVSASLYHLEL 462
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
++ + ++ YG+ D + ++I++ + +V DA V + + +W A
Sbjct: 463 SNQ----IHGLIIKYGV--SLDEFAGSALIDVYSKCSRVGDA-RLVFEEIQDKDIVVWTA 515
Query: 296 L 296
+
Sbjct: 516 M 516
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y + A +F+ M D +++ +MI GY + + + EA+ LF EM SP
Sbjct: 384 LIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPT 443
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F L G S+ +L+ Q+HG+ +K D ++L+ +Y+KC + D+ +F
Sbjct: 444 LLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFE 503
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ +D + W +M G + E+L +Y+ + L P+ TF V+TA ++ +
Sbjct: 504 EIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRH 563
Query: 241 GWELFNSMVNSYGLQPGFDH--YI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G + N ++ + GFD ++ +++++ ++G +++A + + + + A W ++
Sbjct: 564 GQQFHNQVI-----KMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWK-DTACWNSM 617
Query: 297 VGV 299
+
Sbjct: 618 IAT 620
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 11/245 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSP 119
++ Y V A LFD+M ++ + W+SM+S Y + EA+ LF + M + P
Sbjct: 80 LLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKP 139
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
A + A L+ Q+HG+ VK Y D+ + SL+ Y K IDD+ +F
Sbjct: 140 NEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLF 199
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ + +W ++I G S GR+ +L +++ M E + PD VL+AC ++
Sbjct: 200 DGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLE 259
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
G + ++ Y L+ G +S++N + KV+ + R+ V+ N W
Sbjct: 260 GGKQ-----IHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRM-VDKNVVSWTT 313
Query: 296 LVGVC 300
++ C
Sbjct: 314 VIAGC 318
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 118/261 (45%), Gaps = 13/261 (4%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
L S++ Q G L A ++ V +++ T +I Y + A LFD +
Sbjct: 144 LASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQ 203
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+ S WT++I+GY + ++ LF +M P + + A + +L+ G+Q
Sbjct: 204 VKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQ 263
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H +++ D+ + N + Y KC ++ ++F M ++ +SW ++I G +
Sbjct: 264 IHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSF 323
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH-- 260
+AL ++ M G PD VL +C ++KG + V++Y ++ D+
Sbjct: 324 HRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQ-----VHAYAIKVNIDNDD 378
Query: 261 YIS--IINLLGRAGKVKDAEE 279
++ +I++ + + DA +
Sbjct: 379 FVKNGLIDMYAKCDSLTDARK 399
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 194/325 (59%), Gaps = 4/325 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI G+V+ G L A+ +FD++P +N +++T MI GY AG + + LF+ ++D
Sbjct: 214 SWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMIDGYAKAGDMESSRFLFEQAAEKD 273
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+AW+++ISGYVQN EA+ +F EM + P L A + L +++
Sbjct: 274 VVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLGDLKLAQRVDS 333
Query: 146 M--QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
+ D ++ ++LV M AKCG ++ + ++F M RD +S+ SMI G S HG
Sbjct: 334 YVDNSSIDLQQDYVI-SALVDMNAKCGNMERALKLFREMPKRDLVSYCSMIHGFSIHGHG 392
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A+ ++ ML G+ PD F VLTAC+H+GLVDKGW+ FNSM +YG+ P DH+
Sbjct: 393 EDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFNSMEENYGISPTPDHFAC 452
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+++LLGR+G+++DA E + + +EPN WGAL+G C L D ++ RL EL+P
Sbjct: 453 MVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKL-HGDTELGEIVANRLFELEPQ 511
Query: 324 NAPGHVALCNIYAANDRHIELTSLR 348
NA +V L NIYAA R +++ +R
Sbjct: 512 NAANYVLLSNIYAAAGRWKDVSLVR 536
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 132/266 (49%), Gaps = 44/266 (16%)
Query: 24 DQSL---NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
DQ L ++++ Y + G++ A+++FD + RN ++WT M+ GY++AG V +A +FD
Sbjct: 147 DQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDE 206
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
MP R+ +W +MI G+V+ ++ A +F M P
Sbjct: 207 MPLRNVASWNAMIRGFVKVGDLSSARGVFDSM------P--------------------- 239
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
E +++ +++ YAK G+++ S +F A +D ++W+++I G +
Sbjct: 240 ------------EKNVVSFTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQN 287
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G A+EAL V+ M + PD + +++A + G + K + +S V++ + D+
Sbjct: 288 GEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLGDL-KLAQRVDSYVDNSSIDLQQDY 346
Query: 261 YIS-IINLLGRAGKVKDAEEFVLRLP 285
IS ++++ + G ++ A + +P
Sbjct: 347 VISALVDMNAKCGNMERALKLFREMP 372
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 15/277 (5%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
++ LS + + +F+ + + + W + I + Q+ ++ IS F M A G P +
Sbjct: 56 LANTLSISTLSYSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDS 115
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T+ + A + G+ +HG + + DL + +LV MY KCGEI D+ ++F
Sbjct: 116 YTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDE 175
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
++ R+ +SW +M++G G EA V++ M + ++ ++ G +
Sbjct: 176 LSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEM----PLRNVASWNAMIRGFVKVGDLSSA 231
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
+F+SM + + ++I+ +AG + ++ F+ E + W AL+
Sbjct: 232 RGVFDSMP-----EKNVVSFTTMIDGYAKAGDM-ESSRFLFEQAAEKDVVAWSALIS--- 282
Query: 302 LSKTDADVASRATKRLLELDPLNA-PGHVALCNIYAA 337
A+ A K LE++ + P L ++ +A
Sbjct: 283 -GYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSA 318
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 201/358 (56%), Gaps = 1/358 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ YV+ G+L A+ LFD + + ++WT M+ GY G + A ++ +P++ +
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W ++ISG VQ + EA++LF EM P T A + LD G +H
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ D+ L +LV MYAKCG I + ++F + R+ ++W ++I GL+ HG A +AL
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+ + M+ G+ PD +TFLGVL+AC H GLV++G + F+ M + + + P HY +++L
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGRAG +++AEE V +P+ + A+ GAL C + + + R +LLE+DP ++
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYG-NVQIGERTAFKLLEIDPQDSGN 596
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVE 385
+V L ++Y+ E S RK M KGV K PGCS + + G VH F D P E
Sbjct: 597 YVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSE 654
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+ LS G++ A D+F+ RD + W SMI+G V+ L EAI ++ EM A P
Sbjct: 200 ITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNE 259
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T + + V L+ G++ H + E+ + L N+L+ MY KCGE+ + +F N
Sbjct: 260 ITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDN 319
Query: 182 MAYRDKISWNSMIMGLSDHG-------------------------------RASEALTVY 210
MA + +SW +M++G + G + EAL ++
Sbjct: 320 MAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALF 379
Query: 211 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYISIINLLG 269
M + PD VT + L+AC+ G +D G W + + + L +++++
Sbjct: 380 HEMQIRTIEPDKVTMVNCLSACSQLGALDVGIW--IHHYIERHKLSIDVALGTALVDMYA 437
Query: 270 RAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
+ G + A + +P + N W A+ +CGL+
Sbjct: 438 KCGNIARALQVFEEIP-QRNCLTWTAV--ICGLA 468
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 114/230 (49%), Gaps = 16/230 (6%)
Query: 40 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS------------MPDRDSI 87
LE+ + L I+ ++ T +I +A ++ C L +S + + +
Sbjct: 64 LERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVF 123
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLF-GAMGSVAYLDQGRQLHG 145
+W + I GYV++ I L+ M+ G P N T+ +L G G + G + G
Sbjct: 124 SWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSC-LGLGVLG 182
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+K +E D+ + N+ ++M CGE+ +Y +F+ RD ++WNSMI G G A E
Sbjct: 183 HVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIE 242
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
A+ +Y+ M + P+ +T +G++++C+ ++ G E F+ + +GL+
Sbjct: 243 AIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKE-FHCYIKEHGLE 291
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 221/396 (55%), Gaps = 11/396 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF-----DTVPIRNK 55
MY+ G+MD A D N+M+ + G +A +LF ++VP N
Sbjct: 460 MYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVP-PNV 518
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGYVQNELIAEAISLFGE 111
++W +I G+ GQV +A D+F M + I WT+MISG QN L EA +F +
Sbjct: 519 VSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQ 578
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M G P + + A ++A L+ GR +HG ++ + L + S++ MYAKCG
Sbjct: 579 MQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGN 638
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+DD+ +F + ++ +N+MI + HG+++EAL +++ +++ G+ PD +TF VL+A
Sbjct: 639 LDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSA 698
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C+H L+ +G ELF MV ++P HY ++ LL G++ +A +L +P P+
Sbjct: 699 CSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTMPSPPDAH 758
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
I G+L+ CG + ++A+ K LL+++P N +VAL N+YAA + E++++R M
Sbjct: 759 ILGSLLAACG-QNHETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDEVSNIRGFM 817
Query: 352 RIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+ KG++K PGCSWI V ++VF + D+ P E+I
Sbjct: 818 KEKGLKKIPGCSWIEVGQELNVFIASDKSHPEKEEI 853
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 6/220 (2%)
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+++ ++ +++ +N L EA+ + EMM GF P N A G + ++ GR
Sbjct: 169 NQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRG 228
Query: 143 LHGMQVKTIYEYD--LILENSLVSMYAKCGEIDDSYRIFSNMAYRDK--ISWNSMIMGLS 198
+HG VK E+D + + SLV MY KCG ++D+ ++F M R + + WNSMI+G
Sbjct: 229 IHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYV 288
Query: 199 DHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+G EA+ ++E M E G+ P V+ G +ACA+ V++G + +++V G +
Sbjct: 289 QNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQ-GHALVILMGFELN 347
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ SI+N + G +++ E + V + W ++
Sbjct: 348 YVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMI 387
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 142/312 (45%), Gaps = 24/312 (7%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDR--DSIAWTSMISGYVQNELIAEAISLFGEM-MAH 115
T ++ Y G + A +FD MP+R + + W SMI GYVQN + EA+ LF +M
Sbjct: 248 TSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEG 307
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
G P + + F A ++ +++G+Q H + + +E + +L +S+++ Y+K G I++
Sbjct: 308 GVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEV 367
Query: 176 YRIFSNMA-YRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACA 233
+F +MA +D+++WN MI G +AL + M E L D VT +L A
Sbjct: 368 ELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAA 427
Query: 234 HAGLVDKGWELF-----NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 288
V G +L N + + G ++++ + G + A +
Sbjct: 428 DTRDVKLGKKLHGFCIRNEFYSDMAVLSG------VLDMYAKCGIMDCARGVFHFAGKKK 481
Query: 289 NHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNI----YAANDRHIEL 344
+ +W ++ C + ++ A K ++ + P +V N + N + +E
Sbjct: 482 DIVLWNTMLAACA----EKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEA 537
Query: 345 TSLRKEMRIKGV 356
+ EM++ GV
Sbjct: 538 QDMFSEMQLSGV 549
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 115/247 (46%), Gaps = 33/247 (13%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPI-RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
+S++N Y + G +E+ + +F ++ + ++++ W MIS Y+ G KA ++ M + ++
Sbjct: 352 SSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEEN 411
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
+ + + T + L + G++LHG
Sbjct: 412 LRFDCV------------------------------TLSSLLALAADTRDVKLGKKLHGF 441
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHGRASE 205
++ + D+ + + ++ MYAKCG +D + +F +D + WN+M+ ++ G + E
Sbjct: 442 CIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGE 501
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
AL ++ M + P+ V++ ++ G V + ++F+ M S G+ P + ++I
Sbjct: 502 ALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLS-GVTPNLITWTTMI 560
Query: 266 NLLGRAG 272
+ L + G
Sbjct: 561 SGLAQNG 567
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 20/256 (7%)
Query: 93 ISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVK-- 149
IS +N + EAIS ++ H +P+ + L L G Q+H +K
Sbjct: 76 ISFLCKNLKLQEAISTLSQLPQH--TPIGPDIYGELLQGCVYARDLSLGLQIHAHLIKKG 133
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL-SDHGRASEALT 208
+ Y + +E+ LV +YAKC + F N+ + + I+GL + +G EAL
Sbjct: 134 SSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALL 193
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG--FDHYI---- 262
Y M+E G PD L AC GL W F ++ + ++ G FD +
Sbjct: 194 SYVEMMEKGFCPDNFVVPNGLKAC--GGL---RWIGFGRGIHGFVVKMGNEFDGCVYVAT 248
Query: 263 SIINLLGRAGKVKDAEEFVLRLP-VEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
S++++ G+ G ++DAE+ +P + N +W ++ + G + +V + + +
Sbjct: 249 SLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSM--IVGYVQNGMNVEAVGLFEKMRFE 306
Query: 322 PLNAPGHVALCNIYAA 337
P V+L ++A
Sbjct: 307 GGVEPSEVSLSGFFSA 322
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 205/363 (56%), Gaps = 4/363 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPI-RNKIAWTCMISGYLSAGQVFKACDLFDSM 81
D + +MI+ YV+ +E A+ LF +P +N W +I GY G + + F +
Sbjct: 143 DVYAWTTMISAYVRNNDVESAEILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFFKEI 202
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQG 140
P +D I+WT+++S Y++N+ E + LF EM+ G P + A + L G
Sbjct: 203 PSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFG 262
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+++H + + + D+ + +SL+ MYAKCG ++ S +F + ++ WNSMI GL+ H
Sbjct: 263 KEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAH 322
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G A EAL ++ M G+ P+ VTF+ VLTAC HAG + +G F SM+ Y + P +H
Sbjct: 323 GYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVEH 382
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y +++LL + G ++DA E + + EPN IWGAL+ C + + + ++A + L+ L
Sbjct: 383 YGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNGCKVHR-NLEIARVTVRNLMIL 441
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV-RKAPGCSWILVKGRVHVFSSGDR 379
+P N+ + L N+YA +R ++ +R EM+ GV ++ PG SWI + +HVF++ D+
Sbjct: 442 EPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVEKRCPGSSWIEINKEIHVFAASDK 501
Query: 380 LEP 382
P
Sbjct: 502 CHP 504
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 47/243 (19%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y S G V A +FD M RD AWT+MIS YV+N + A LF EM
Sbjct: 117 TTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEM------ 170
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+G+ + N+++ YAK G I+
Sbjct: 171 -------------------PEGK-------------NTATWNAVIDGYAKLGNIERVEFF 198
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGL 237
F + +D ISW +++ + R E + ++ M+ G + PD V V++ACAH G
Sbjct: 199 FKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGA 258
Query: 238 VDKGWEL-FNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
+ G E+ F MV+ +G+ D YI S+I++ + G ++ + +L E N W
Sbjct: 259 LGFGKEVHFYLMVSGFGI----DVYIGSSLIDMYAKCGSLERSLLVFYKLK-EKNLFCWN 313
Query: 295 ALV 297
+++
Sbjct: 314 SMI 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A F + +++ + ++I V + +A+ + M+ P + +F+ L A
Sbjct: 31 AISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIKACTL 90
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ G+ LHG K ++ + ++ +LV Y+ G + D+ ++F M+ RD +W +M
Sbjct: 91 LTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTM 150
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
I + A ++ M E +T T+ V+ A G +++
Sbjct: 151 ISAYVRNNDVESAEILFVEMPE---GKNTATWNAVIDGYAKLGNIER 194
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 203/370 (54%), Gaps = 5/370 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D ++++++ Y + G + +FD + + ++G G V A D+F
Sbjct: 133 DKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFK 192
Query: 83 ----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ + + WTS+I+ VQN EA+ LF +M A G P T L A G+++ L
Sbjct: 193 AGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPACGNISALT 252
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
G+++H ++ D+ + ++L+ MYA CG I S F M +R+ +SWNS++ G +
Sbjct: 253 HGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYA 312
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
HG+A E + ++ ML+ G PD++TF VL+AC GL ++GW FNSM Y ++P
Sbjct: 313 MHGKAKETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKM 372
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+HY ++ LL R GK+++A + +P EP+ +WGAL+ C + + + A ++L
Sbjct: 373 EHYACMVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHH-NLSLGEIAAEKLF 431
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
L+P N ++ L NIYA+ E +R M+ KG++K PGCSWI + RVH SGD
Sbjct: 432 VLEPDNPGNYILLSNIYASKGMWDEENRVRDMMKSKGLQKNPGCSWIEIGHRVHTLVSGD 491
Query: 379 RLEPHVEDIL 388
+ P +++IL
Sbjct: 492 KSHPQMKEIL 501
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 138/264 (52%), Gaps = 8/264 (3%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP---- 82
++S+++ Y++ +++ AQ+LFD + R+ I W+ MI+GY G V +A ++F M
Sbjct: 1 MSSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGV 60
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+ + ++W MI+G+ L EA+ LF EM++ GF P T + + +G++ + G+Q
Sbjct: 61 EPNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQ 120
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+HG +K E D + ++L+ MY +CG + R+F + + S N+ + GLS +G
Sbjct: 121 VHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGL 180
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
AL V++ L + VT+ ++ +C G + ELF M + G++P
Sbjct: 181 VDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDM-QADGVEPNAVTIP 239
Query: 263 SIINLLGRAGKVKDAEE---FVLR 283
S+I G + +E F LR
Sbjct: 240 SLIPACGNISALTHGKEIHCFSLR 263
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 193/343 (56%), Gaps = 2/343 (0%)
Query: 41 EKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNE 100
E E+ T R+ T ++ Y+ G A +F+ + +D +AW++M++GY Q
Sbjct: 414 EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTG 473
Query: 101 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS-VAYLDQGRQLHGMQVKTIYEYDLILE 159
EA LF +++ G P TF+ + A S A +QG+Q H +K L +
Sbjct: 474 ETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVS 533
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
++LV+MYAK G ID ++ +F RD +SWNSMI G S HG+A +AL V++ M + +
Sbjct: 534 SALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMD 593
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
D VTF+GV+TAC HAGLV+KG + FNSM+N + + P HY +I+L RAG ++ A
Sbjct: 594 VDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMG 653
Query: 280 FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 339
+ +P P +W L+G + + + ++ A ++L+ L P ++ +V L N+YAA
Sbjct: 654 IINEMPFPPGATVWRTLLGAARVHR-NVELGELAAEKLISLQPEDSAAYVLLSNMYAAAG 712
Query: 340 RHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
E T++RK M + V+K PG SWI VK + + F +GD P
Sbjct: 713 NWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHP 755
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 93/175 (53%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ V +FD M +R+ ++WTS+++GY N L LF +M G
Sbjct: 132 TSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL 191
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T + + A+ + + G Q+H M VK +E + + NSL+S+Y++ G + D+ +
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
F M RD ++WNSMI G +G+ E ++ M G+ P +TF V+ +CA
Sbjct: 252 FDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCA 306
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 163/375 (43%), Gaps = 49/375 (13%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI-------- 52
+YS G++ A + + + D + NSMI GYV+ GQ + E+F+ + +
Sbjct: 238 LYSRLGMLRDARDVFD-KMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHM 296
Query: 53 -------------------------------RNKIAWTCMISGYLSAGQVFKACDLFDSM 81
++I T ++ ++ A LF M
Sbjct: 297 TFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLM 356
Query: 82 PD-RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+ ++ ++WT+MISG +QN +A++LF +M G P + T++ + +V Y
Sbjct: 357 EEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL----TVHYPVFV 412
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
++H +KT YE + +L+ Y K G D+ ++F + +D ++W++M+ G +
Sbjct: 413 SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQT 472
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G EA ++ +++ G+ P+ TF V+ ACA + + F++ L
Sbjct: 473 GETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCV 532
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSKTDADVASRATKRL 317
+++ + + G + A E V + E + W +++ G +K +V KR
Sbjct: 533 SSALVTMYAKRGNIDSAHE-VFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRN 591
Query: 318 LELDPLNAPGHVALC 332
+++D + G + C
Sbjct: 592 MDVDAVTFIGVITAC 606
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 6/184 (3%)
Query: 48 DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 107
+ +P+ N +IS Y G + A D+FD M RD + W SMI+GYV+N E
Sbjct: 227 EAIPVFNS-----LISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFE 281
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
+F +M G P + TFA + + S+ L + + +K+ + D I+ +L+ +
Sbjct: 282 IFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALS 341
Query: 168 KCGEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFL 226
KC E+DD+ +FS M ++ +SW +MI G +G +A+ ++ M G+ P+ T+
Sbjct: 342 KCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYS 401
Query: 227 GVLT 230
+LT
Sbjct: 402 AILT 405
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 74 ACDLFDSMPDRDSI--AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 131
A +LFD +P R + ++ Y +++ EA++LF ++ P T + +F
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
GRQ+H VK + + SLV MY K ++D R+F M R+ +SW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
S++ G S +G ++ M G+ P+ T V+ A + G+V G ++ ++MV
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQV-HAMVVK 222
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+G + + S+I+L R G ++DA + ++ + + W +++
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIA 268
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 84
++++ Y + G ++ A E+F R+ ++W MISGY GQ KA ++FD M R
Sbjct: 534 SALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMD 593
Query: 85 -DSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQG 140
D++ + +I+ L+ + F M+ H +P ++ + L++
Sbjct: 594 VDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKA 651
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 220/406 (54%), Gaps = 49/406 (12%)
Query: 1 MYSVFGLMD------YASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN 54
MYSVFG +D Y S L D S N+MI+GYV+ G + A++LFD + R+
Sbjct: 164 MYSVFGRIDDARLIFYESYVL-------DLVSYNTMIDGYVKNGGIRDARKLFDEMYERD 216
Query: 55 KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ---------------- 98
+W CMI+GY+S G + A +LF++MP++D ++W MI G V+
Sbjct: 217 VFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMIDGCVRVGNVSLALEFFNQMDG 276
Query: 99 ---------NELIA---------EAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQ 139
N L+A E + +F MM G + P T + A ++ L+
Sbjct: 277 VVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNL 336
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G +H + D++LE L++MYAKCG +D + +F M + +SWNSMIMG
Sbjct: 337 GLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGL 396
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
HG +AL ++ M + G P+ TF+ VL+AC+HAG+V +GW F+ M Y ++P +
Sbjct: 397 HGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMRRVYKIEPKVE 456
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
HY +++LL RAG VK++EE + ++ V+ A+WGAL+ C + D ++A KRL+E
Sbjct: 457 HYGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALLSGCR-THLDLELAENVAKRLVE 515
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
L+P + ++ L ++YAA R ++ +R M+I G++K S +
Sbjct: 516 LEPQDISPYILLSDVYAAQGRWDDVERVRLAMKINGLQKEAASSLV 561
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 12/226 (5%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLF-GEMMAHGFSPLNGTFAVLFGAMGSVA 135
FD + D+ ++I Y+++ + A + M+A P + TF ++
Sbjct: 75 FFDHLHHPDAFLCNTIIRSYLRSSNPSAAFHFYYHRMIAKSVPPNHYTFPLILKLCVDHG 134
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+G + H VK + DL + NSL+ MY+ G IDD+ IF D +S+N+MI
Sbjct: 135 CKLEGEKGHARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMID 194
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G +G +A +++ M E ++ G ++ G + ELF +M N +
Sbjct: 195 GYVKNGGIRDARKLFDEMYERDVFSWNCMIAGYVS----VGDLAAAKELFEAMPNKDVVS 250
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLP--VEPNHAIWGALVGV 299
+ +I+ R G V A EF ++ V N W +L+ +
Sbjct: 251 -----WNCMIDGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLAL 291
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 193/334 (57%), Gaps = 1/334 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N T ++ Y + A +F+SMP+ +++ W+S+++GYVQN L A+ LF +
Sbjct: 191 NCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQ 250
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
GF + A +A L +G+Q+H + K+ + ++ + +SL+ MYAKCG I
Sbjct: 251 LMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIR 310
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
++Y +F R + WN+MI G H A EA+ ++E M + GL+PD VT++ VL AC+
Sbjct: 311 EAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLNACS 370
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
H GL ++G + F+ MV + L+P HY ++++LGRAG V A + + R+P +IW
Sbjct: 371 HMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFSATSSIW 430
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
G+L+ C + + + A A K L E++P NA HV L NIYAAN + E+ RK +R
Sbjct: 431 GSLLASCRI-HGNIEFAEIAAKHLFEMEPDNAGNHVLLANIYAANKKWEEVAKTRKLLRD 489
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
++K G SWI +K ++H F+ G+R P + +I
Sbjct: 490 SELKKDRGTSWIEIKNKIHSFTVGERNHPLINEI 523
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 9/221 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y V A +FD MP + ++W +MI + EA+ LF +M+ G
Sbjct: 97 LINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFN 156
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + + + + QLH +K + + + +L+ +YAKC I D+ ++F
Sbjct: 157 EFTISSVLCECAFKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFE 216
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+M + ++W+S++ G +G AL ++ G D + ACA + +
Sbjct: 217 SMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIE 276
Query: 241 GWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDA 277
G + V++ + GF I S+I++ + G +++A
Sbjct: 277 GKQ-----VHAISCKSGFGSNIYVTSSLIDMYAKCGCIREA 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
GR H + +E D++ N L++MY+KC + D+ +F M + +SWN+MI L+
Sbjct: 75 GRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTR 134
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
+ EAL ++ ML G + T VL CA + + +L +++ ++ D
Sbjct: 135 IAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQL-----HAFSIKVSVD 189
Query: 260 HYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+++++ + +KDA + +P E N W +++
Sbjct: 190 SNCFVGTALLHVYAKCSSIKDASKMFESMP-ETNAVTWSSILA 231
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 203/355 (57%), Gaps = 6/355 (1%)
Query: 38 GQLEKAQ---ELFDTVPIRNKIA-WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 93
G LE+ + L D + + + ++ +IS Y +V A +FD++ + ++ W +MI
Sbjct: 351 GDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMI 410
Query: 94 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 153
GY QN + EA++LF M + G P + TF + A+ ++ Q + +HG+ ++T +
Sbjct: 411 LGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMD 470
Query: 154 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 213
++ + +LV MYAKCG I+ + +F M R I+WN+MI G HG AL +++ M
Sbjct: 471 TNVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDM 530
Query: 214 L-EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 272
E L P+ +TFL V++AC+H+G V++G F M YGL+P DHY ++++LLGRAG
Sbjct: 531 QNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAG 590
Query: 273 KVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 332
K+ DA +F+ +P++P + GA++G C + K + ++ +A RL ELDP ++ +
Sbjct: 591 KLDDAWKFIHEMPIKPGITVLGAMLGACKIHK-NIELGEKAADRLFELDPDEGGYYMLVA 649
Query: 333 NIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
N+YA+ ++ +R M KG+ K PGCS + + VH F SG P + I
Sbjct: 650 NMYASASMWDKVAKVRTAMEKKGLHKTPGCSLVEWRNEVHAFYSGSTNHPQSKRI 704
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N A T +++ Y ++ A +F MP+RD + W ++++GY QN +A+ L +M
Sbjct: 169 NLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQ 228
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G + T + A+ V L GR +HG V+ ++ + + +L+ MY KCGE++
Sbjct: 229 EDGKKADSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVE 288
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+F M+ ++ +SWN++I GL+ +G + EA + M E + P V+ +G L AC+
Sbjct: 289 TGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACS 348
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+ G +++G + + +++ L S+I++ + +V A L + N W
Sbjct: 349 NLGDLERG-KFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTN-VTW 406
Query: 294 GALV 297
A++
Sbjct: 407 NAMI 410
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 129/243 (53%), Gaps = 10/243 (4%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +IS + G + +A +FDS+ + + + +++ GYV+N ++E++S F M
Sbjct: 73 TKLISLFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVE 132
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P+ F L G L +G ++HGM +K +E +L S+V++YAKC +IDD+Y++
Sbjct: 133 PVVYDFTYLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKM 192
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M RD + WN+++ G + +G A +AL + M E G D++T + VL A A
Sbjct: 193 FVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADV--- 249
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
KG + S V+ Y ++ GFD +++ +++ + G+V+ R+ N W
Sbjct: 250 -KGLRIGRS-VHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMS-SKNVVSWN 306
Query: 295 ALV 297
++
Sbjct: 307 TVI 309
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 194/325 (59%), Gaps = 4/325 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI G+V+ G L A+ +FD++P +N +++T M+ GY AG + + LF+ ++D
Sbjct: 214 SWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMVDGYAKAGDMESSRFLFEQAAEKD 273
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+ W+++ISGYVQN EA+ +F EM + P L A + L +++
Sbjct: 274 VVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQRVDS 333
Query: 146 M--QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
+ D ++ ++LV M AKCG ++ + ++F M RD +S+ SMI G S HG
Sbjct: 334 YVGNNSIDLQKDHVI-SALVDMNAKCGNMERALKLFQEMPERDLVSYCSMIHGFSIHGHG 392
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A+ ++ ML G+ PD F VLTAC+H+GL+DKGW+ FNSM +YG+ P DH+
Sbjct: 393 EDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFNSMEENYGISPTPDHFAC 452
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+++LLGR+G+++DA E + + +EPN WGAL+G C L + D ++ RL EL+P
Sbjct: 453 MVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKL-QGDTELGEIVANRLFELEPQ 511
Query: 324 NAPGHVALCNIYAANDRHIELTSLR 348
NA +V L NIYAA R +++ +R
Sbjct: 512 NAANYVLLSNIYAAAGRWKDVSLVR 536
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 44/266 (16%)
Query: 24 DQSL---NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
DQ L ++I+ Y + GQ+ A+++F+ + RN ++WT M+ GY++AG V KA +FD
Sbjct: 147 DQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDG 206
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
MP R+ +W +MI G+V+ ++ A +F M P
Sbjct: 207 MPLRNVASWNAMIRGFVKVGDLSSARGVFDSM------P--------------------- 239
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
E +++ ++V YAK G+++ S +F A +D ++W+++I G +
Sbjct: 240 ------------EKNVVSFTTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQN 287
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G A+EAL V+ M + PD +G+++A + G + K + +S V + + DH
Sbjct: 288 GEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDL-KLAQRVDSYVGNNSIDLQKDH 346
Query: 261 YIS-IINLLGRAGKVKDAEEFVLRLP 285
IS ++++ + G ++ A + +P
Sbjct: 347 VISALVDMNAKCGNMERALKLFQEMP 372
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 135/304 (44%), Gaps = 20/304 (6%)
Query: 35 VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS 94
V A +++ E D V I N I+ ++ LS + +F+ + + + W + I
Sbjct: 34 VHASIIQRGLEQ-DQVLISNFIS----LANTLSISTRSYSTAVFNRVLNPSTFLWNTFIR 88
Query: 95 GYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 154
+ Q+ ++ IS F M A G P + T+ + A + G+ +HG + +
Sbjct: 89 THCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQ 148
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 214
DL + +L+ MY KCG+I D+ ++F+ + R+ +SW +M++G G +A V++ M
Sbjct: 149 DLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDGM- 207
Query: 215 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 274
+ ++ ++ G + +F+SM + + ++++ +AG +
Sbjct: 208 ---PLRNVASWNAMIRGFVKVGDLSSARGVFDSMP-----EKNVVSFTTMVDGYAKAGDM 259
Query: 275 KDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA-PGHVALCN 333
++ F+ E + W AL+ A+ A K LE++ +N P L
Sbjct: 260 -ESSRFLFEQAAEKDVVTWSALIS----GYVQNGEANEALKVFLEMESMNVIPDEFVLVG 314
Query: 334 IYAA 337
+ +A
Sbjct: 315 LMSA 318
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 198/356 (55%), Gaps = 5/356 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----D 83
N++++ Y + + +AQ +FD +P R +W +++ Y + + K +F M
Sbjct: 483 NALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
D I W+ +I G V+N I EA+ +F +M GF P T + A L G+++
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEI 602
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H + ++DL N+LV MYAKCG + S +F M +D SWN+MI HG
Sbjct: 603 HCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNG 662
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
EAL+++E ML + PD+ TF VL+AC+H+ LV++G ++FNSM + ++P +HY
Sbjct: 663 KEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTC 722
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
++++ RAG +++A F+ R+P+EP W A + C + K + ++A + K+L E+DP
Sbjct: 723 VVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYK-NVELAKISAKKLFEIDPN 781
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
+ +V L NI E + +RK M+ +G+ K PGCSW V RVH F +GD+
Sbjct: 782 GSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDK 837
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 5/203 (2%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
+ N +++ Y S V +A +FD MP R+ I W S+ S YV + +++F E
Sbjct: 274 VENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFRE 333
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M +G P + + A + L G+ +HG VK D+ + +LV++YA C
Sbjct: 334 MGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLC 393
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+ ++ +F M +R+ ++WNS+ + G + L V+ M+ G+ PD VT L +L A
Sbjct: 394 VREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHA 453
Query: 232 CA-----HAGLVDKGWELFNSMV 249
C+ +G V G+ + + MV
Sbjct: 454 CSDLQDLKSGKVIHGFAVRHGMV 476
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
++ Y V +A +FD MP RD + W S+ S YV + +++F EM+ G P
Sbjct: 183 VNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDP 242
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T + + A + L G+ +HG +K ++ + N+LV++Y C + ++ +F
Sbjct: 243 VTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDL 302
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
M +R+ I+WNS+ + G + L V+ M G+ PD + +L AC+ + G
Sbjct: 303 MPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG 362
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV-- 299
+ V +G+ +++NL V++A+ +P N W +L
Sbjct: 363 KTIHGFAV-KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP-HRNVVTWNSLSSCYV 420
Query: 300 -CGLSKTDADV 309
CG + +V
Sbjct: 421 NCGFPQKGLNV 431
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ Y + V +A +FD MP R+ + W S+ S YV + +++F EM+ +G
Sbjct: 382 TALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVK 441
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T + A + L G+ +HG V+ D+ + N+L+S+YAKC + ++ +
Sbjct: 442 PDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVV 501
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + +R+ SWN ++ + + L ++ M + D +T+ V+ C +
Sbjct: 502 FDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRI 561
Query: 239 DKGWELFNSMVNSYGLQP 256
++ E+F M + G +P
Sbjct: 562 EEAMEIFRKM-QTMGFKP 578
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 120/270 (44%), Gaps = 15/270 (5%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I Y V A +FD + RD + W S+ + YV + +++F +M +
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T + + + L G+++HG V+ D+ + ++ V+ YAKC + ++ +F
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-----HAG 236
M +RD ++WNS+ + G + L V+ M+ G+ PD VT +L+AC+ +G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G+ L + MV + + +++NL V++A+ +P N W +L
Sbjct: 262 KAIHGFALKHGMVENVFVSN------ALVNLYESCLCVREAQAVFDLMP-HRNVITWNSL 314
Query: 297 VGV---CGLSKTDADVASRATKRLLELDPL 323
CG + +V ++ DP+
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGVKPDPM 344
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 95/233 (40%), Gaps = 5/233 (2%)
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 163
EAI ++ A G P F + A + + +Q H + D+ + N+ +
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 164 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
Y KC ++ + R+F ++ RD ++WNS+ + G + L V+ M + + +
Sbjct: 83 HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 283
T +L C+ + G E+ + V +G+ + +N + V++A+
Sbjct: 143 TVSSILPGCSDLQDLKSGKEI-HGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 284 LPVEPNHAIWGALVGV---CGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
+P + W +L CG + +V ++ DP+ ++ C+
Sbjct: 202 MP-HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 190/332 (57%), Gaps = 1/332 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ +I Y G + +A + + + +R +++W S+ISG+ + A+S F M+ G
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI 571
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P N T+A + ++A ++ G+Q+HG +K D+ + +++V MY+KCG + DS +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIM 631
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F RD ++W++MI + HG +A+ ++E M + P+ F+ VL ACAH G V
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
DKG F M + YGL P +HY +++LLGR+G+V +A E + +P E + IW L+G
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
+C L + + +VA +A LL+LDP ++ +V L N+YA E+ +R M+ ++K
Sbjct: 752 ICRL-QGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKK 810
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDILLQ 390
PGCSWI V+ VH F GD+ P E+I Q
Sbjct: 811 EPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQ 842
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 17/315 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N ++ Y + L A +FD +P R+ I+W MI GY G + A LFDSMP+RD +
Sbjct: 77 NCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVV 136
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W SM+S Y+QN ++I +F +M TFAV+ A + G Q+H +
Sbjct: 137 SWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLA 196
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
++ ++ D++ +LV MY+ C ++D ++ IF M R+ + W+++I G + R +E L
Sbjct: 197 IQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGL 256
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP--GFDHYI--S 263
+Y+ ML+ G+ TF +CA + G +L ++Y L+ G+D+ + +
Sbjct: 257 KLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQL-----HAYALKTNFGYDNIVGTA 311
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDA-----DVASRATKRLL 318
+++ + ++ DA + P P AL + G ++ D ++ K L
Sbjct: 312 TLDMYAKCDRMVDARKVFNTFP-NPTRQSHNAL--IVGYARQDQVLEALEIFRSLQKSYL 368
Query: 319 ELDPLNAPGHVALCN 333
+ D ++ G + C+
Sbjct: 369 DFDEISLSGALTACS 383
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 149/314 (47%), Gaps = 45/314 (14%)
Query: 25 QSLNSMINGYVQAGQLEKAQELF----------DTVPIRNKIAWTCMISGYL-------- 66
QS N++I GY + Q+ +A E+F D + + + I GYL
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397
Query: 67 ---------------------SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
G + +AC +FD M +D+++W ++I+ + QNE + E
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
++LF M+ P + TF + A L+ G ++HG +K+ D + ++++ M
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDM 517
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
Y KCG + ++ +I + R +SWNS+I G S + AL+ + ML+ G+ PD T+
Sbjct: 518 YCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTY 577
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLR 283
VL CA+ V+ G ++ ++ LQ D YI +I+++ + G ++D+ +
Sbjct: 578 ATVLDICANLATVELGKQIHGQILK---LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEK 634
Query: 284 LPVEPNHAIWGALV 297
P + ++ W A++
Sbjct: 635 AP-KRDYVTWSAMI 647
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 39/210 (18%)
Query: 123 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 182
TF+ +F ++ ++ G+Q H T + + + N L+ Y KC ++ ++ +F M
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 183 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
RD ISWN+MI G + G A ++++M E D V++ +L+ G K
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE----RDVVSWNSMLSCYLQNGFHRKSI 155
Query: 243 ELFNSM---------------------VNSYGL---------QPGFDHYI----SIINLL 268
E+F M + YGL Q GFD + +++++
Sbjct: 156 EIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMY 215
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
K+ A +P E N W A++
Sbjct: 216 STCKKLDHAFNIFCEMP-ERNSVCWSAVIA 244
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 190/332 (57%), Gaps = 1/332 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ +I Y G + +A + + + +R +++W S+ISG+ + A+S F M+ G
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI 571
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P N T+A + ++A ++ G+Q+HG +K D+ + +++V MY+KCG + DS +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIM 631
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F RD ++W++MI + HG +A+ ++E M + P+ F+ VL ACAH G V
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
DKG F M + YGL P +HY +++LLGR+G+V +A E + +P E + IW L+G
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
+C L + + +VA +A LL+LDP ++ +V L N+YA E+ +R M+ ++K
Sbjct: 752 ICRL-QGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKK 810
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDILLQ 390
PGCSWI V+ VH F GD+ P E+I Q
Sbjct: 811 EPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQ 842
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 17/315 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N ++ Y + L A +FD +P R+ I+W MI GY G + A LFDSMP+RD +
Sbjct: 77 NCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVV 136
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W SM+S Y+QN ++I +F +M TFAV+ A + G Q+H +
Sbjct: 137 SWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLA 196
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
++ ++ D++ +LV MY+ C ++D ++ IF M R+ + W+++I G + R +E L
Sbjct: 197 IQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGL 256
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP--GFDHYI--S 263
+Y+ ML+ G+ TF +CA + G +L ++Y L+ G+D+ + +
Sbjct: 257 KLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQL-----HAYALKTNFGYDNIVGTA 311
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDA-----DVASRATKRLL 318
+++ + ++ DA + P P AL + G ++ D ++ K L
Sbjct: 312 TLDMYAKCDRMVDARKVFNTFP-NPTRQSHNAL--IVGYARQDQVLEALEIFRSLQKSYL 368
Query: 319 ELDPLNAPGHVALCN 333
+ D ++ G + C+
Sbjct: 369 DFDEISLSGALTACS 383
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 149/314 (47%), Gaps = 45/314 (14%)
Query: 25 QSLNSMINGYVQAGQLEKAQELF----------DTVPIRNKIAWTCMISGYL-------- 66
QS N++I GY + Q+ +A E+F D + + + I GYL
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397
Query: 67 ---------------------SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
G + +AC +FD M +D+++W ++I+ + QNE + E
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
++LF M+ P + TF + A L+ G ++HG +K+ D + ++++ M
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDM 517
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
Y KCG + ++ +I + R +SWNS+I G S + AL+ + ML+ G+ PD T+
Sbjct: 518 YCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTY 577
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLR 283
VL CA+ V+ G ++ ++ LQ D YI +I+++ + G ++D+ +
Sbjct: 578 ATVLDICANLATVELGKQIHGQILK---LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEK 634
Query: 284 LPVEPNHAIWGALV 297
P + ++ W A++
Sbjct: 635 AP-KRDYVTWSAMI 647
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 39/210 (18%)
Query: 123 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 182
TF+ +F ++ ++ G+Q H T + + + N L+ Y KC ++ ++ +F M
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 183 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
RD ISWN+MI G + G A ++++M E D V++ +L+ G K
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE----RDVVSWNSMLSCYLQNGFHRKSI 155
Query: 243 ELFNSM---------------------VNSYGL---------QPGFDHYI----SIINLL 268
E+F M + YGL Q GFD + +++++
Sbjct: 156 EIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMY 215
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
K+ A +P E N W A++
Sbjct: 216 STCKKLDHAFNIFCEMP-ERNSVCWSAVIA 244
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 198/340 (58%), Gaps = 5/340 (1%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
M++GY + G++E A+E+F+ +P RN W+ M+ GY G V +A +F +P R+ W
Sbjct: 187 MVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIW 246
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM-QV 148
SMI+GYVQN +A+ FGEM GF P T + A + LD G+Q+H M +
Sbjct: 247 NSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIEC 306
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
K I +L + L+ MYAKCG++ ++ +F + R+ WN+MI G + +G+ +E L
Sbjct: 307 KGIAVNQFVL-SGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLE 365
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+ M E + PD VTF+ VL+ACAH GLV + E+ + M YG++ G HY +++LL
Sbjct: 366 YLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKM-EEYGIEMGIRHYGCMVDLL 424
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGH 328
GRAG++K+A E + R+P++PN + GA++G C + +D +A + K + H
Sbjct: 425 GRAGRLKEAYELIKRMPMKPNETVLGAMIGACWI-HSDMKMAEQVMKMIGVDSAACVNSH 483
Query: 329 -VALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
V L NIYAA+++ + +R M G K PGCS I++
Sbjct: 484 NVLLSNIYAASEKWEKSEMIRSSMVDGGSEKIPGCSSIIL 523
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+++ Y + G + A+++FD + RN + W MI GYL G A F+ MP + +
Sbjct: 90 TAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRV 149
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W+ MI G+ +N A F ++ P V++ M Y +G +
Sbjct: 150 SWSQMIGGFARNGDTLTARKFFDKV------PYELKDVVIWTMMVD-GYAKKGEMEDARE 202
Query: 148 V-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
V + + E + + +S+V Y K G++ ++ IF + R+ WNSMI G +G +A
Sbjct: 203 VFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKA 262
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
L + M G PD T + VL+ACA G +D G ++ + M+ G+ +I+
Sbjct: 263 LEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHH-MIECKGIAVNQFVLSGLID 321
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ + G + +A V E N W A++
Sbjct: 322 MYAKCGDLVNA-RLVFESCNERNVFCWNAMIA 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
L A S +L + LH +K + D+ + ++V+ YAKCG + D+ ++F M R+
Sbjct: 57 LLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERN 116
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
++WN+MI G +G A AL +E M V++ ++ A G + F+
Sbjct: 117 DVTWNAMIGGYLRNGDAKSALLAFEEMPG----KTRVSWSQMIGGFARNGDTLTARKFFD 172
Query: 247 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 306
+ Y L+ + +++ + G+++DA E V L E N+ +W ++ VCG K
Sbjct: 173 KV--PYELKD-VVIWTMMVDGYAKKGEMEDARE-VFELMPERNYFVWSSM--VCGYCKKG 226
Query: 307 ADVASRATKRLLELDPL 323
+ + A R + + L
Sbjct: 227 DVMEAEAIFRRIPVRNL 243
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR-- 84
L+ +I+ Y + G L A+ +F++ RN W MI+G+ GQ + + D M +
Sbjct: 316 LSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNI 375
Query: 85 --DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D++ + +++S L++EA+ + +M +G + + +G L + +
Sbjct: 376 RPDAVTFITVLSACAHGGLVSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGRLKEAYE 435
Query: 143 L 143
L
Sbjct: 436 L 436
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 212/406 (52%), Gaps = 42/406 (10%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELF------DTVPIRNKI-------------------- 56
D S N+MI+GYVQ+G+ E+A F + +P ++ +
Sbjct: 227 DVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIG 286
Query: 57 AW-------------TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 103
+W +I Y G+ A +LFD + ++D I+W +MI GY L
Sbjct: 287 SWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYE 346
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY-EYDLILENSL 162
EA++LF M+ P + TF + A + LD G+ +H K + + L SL
Sbjct: 347 EALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSL 406
Query: 163 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY-PD 221
+ MYAKCG I+ + R+F +M R+ SWN+M+ G + HG A AL ++ M+ GL+ PD
Sbjct: 407 IDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPD 466
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 281
+TF+GVL+AC AGLVD G + F SM+ YG+ P HY +I+LL RA K ++AE +
Sbjct: 467 DITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILM 526
Query: 282 LRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 341
+ +EP+ AIWG+L+ C + + +RL +L+P NA V L NIYA R
Sbjct: 527 KNMEMEPDGAIWGSLLSACK-AHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRW 585
Query: 342 IELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
++ +R + KG++K PGC+ I + G VH F GD+ P +I
Sbjct: 586 DDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNI 631
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 147/277 (53%), Gaps = 1/277 (0%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
+F+ S+I+ Y G+++ A+ +FD +R+ +++T +I+GY+S G + A LFD
Sbjct: 163 HFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDE 222
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+P +D ++W +MISGYVQ+ EAI F EM P T V+ A G + G
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG 282
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+ + + +L L N+L+ MY KCGE D + +F + +D ISWN+MI G S
Sbjct: 283 KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYL 342
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
EAL ++E ML + P+ VTFLG+L ACA G +D G + + +
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASL 402
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ S+I++ + G ++ AE V R N A W A++
Sbjct: 403 WTSLIDMYAKCGCIEAAER-VFRSMHSRNLASWNAML 438
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 39/302 (12%)
Query: 31 INGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR---DSI 87
IN + Q L L +TV +++K+ C +S +G + A LF+ +
Sbjct: 41 INTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVS---PSGDLSYALSLFEENQQHHKHNVF 97
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W S+I GY + ++ LF M+ +G P + TF LF + +G+QLH
Sbjct: 98 IWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHA 157
Query: 148 VKTIYEYDLILENSLVSMYAKCGE-------------------------------IDDSY 176
+K ++ + S++ MYA GE +DD+
Sbjct: 158 LKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDAR 217
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
R+F + +D +SWN+MI G GR EA+ + M E + P+ T + VL+AC H
Sbjct: 218 RLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTR 277
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+ G + S V G ++I++ + G+ A E + E + W +
Sbjct: 278 SGELG-KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE-EKDVISWNTM 335
Query: 297 VG 298
+G
Sbjct: 336 IG 337
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 15 LEGNLNNFDDQSL-NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFK 73
++ NL N + SL S+I+ Y + G +E A+ +F ++ RN +W M+SG+ G +
Sbjct: 390 IDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAER 449
Query: 74 ACDLFDSMPDR-----DSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSP 119
A LF M ++ D I + ++S Q L+ F M+ +G SP
Sbjct: 450 ALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISP 501
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 206/363 (56%), Gaps = 3/363 (0%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
+N++I + + G++E A+ +FD+ R+ +W MI Y+ +G + A +LFD M +RD
Sbjct: 149 VNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDV 208
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++W+++I+GYVQ EA+ F +M+ P T A ++ LDQG+ +H
Sbjct: 209 VSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVY 268
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI-SWNSMIMGLSDHGRASE 205
+ + + L SL+ MYAKCGEID + +F + K+ WN+MI G + HG+ E
Sbjct: 269 IRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEE 328
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
A+ V+E M + P+ VTF+ +L AC+H +V +G F M + YG+ P +HY ++
Sbjct: 329 AINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMV 388
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
+LL R+G +KD+EE +L +P+ P+ AIWGAL+ C + K D + R + + E+DP +
Sbjct: 389 DLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYK-DMERGYRIGRIIKEIDPNHI 447
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA-PGCSWILVKGRVHVFSSGDRLEPHV 384
+V L NIY+ + R E +R++ I RK PG S I + G H F GDR P
Sbjct: 448 GCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQS 507
Query: 385 EDI 387
+I
Sbjct: 508 REI 510
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 34/293 (11%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGY-VQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAM 131
A LFD +P D + +MI + + ++I++F ++ G+ P +F FGA
Sbjct: 62 AHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGAC 121
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
G+ + +G Q+ VK + ++ + N+L+ M+ K G ++D+ +F + RD SWN
Sbjct: 122 GNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWN 181
Query: 192 SM-------------------------------IMGLSDHGRASEALTVYETMLEFGLYP 220
+M I G G EAL + ML+ + P
Sbjct: 182 TMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKP 241
Query: 221 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
+ T + L AC++ +D+G + + + ++ S+I++ + G++ A
Sbjct: 242 NEYTMVSALAACSNLVALDQG-KWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSV 300
Query: 281 VLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
V+ W A++G + + + K +E N +AL N
Sbjct: 301 FHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLN 353
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 198/336 (58%), Gaps = 3/336 (0%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
N + ++ Y G++ ++ +FD + ++ ++W ++ISG+ + EA+ LF +M
Sbjct: 228 ENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKM 287
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
GF T++ L + + L+QG+ LH +K+ + + N+L+ MYAK G I
Sbjct: 288 QREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNI 347
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET-MLEFGLYPDTVTFLGVLTA 231
D+ ++F + D +S NSM++G + HG EA+ ++E ML + P+ +TFL VLTA
Sbjct: 348 CDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTA 407
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C+HAGL+D+G F ++ YGL+P HY ++++L GRAG + A+ F+ +P+EPN
Sbjct: 408 CSHAGLLDEGLYYFE-LMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNAT 466
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
IWGAL+G + K + ++ + A +++LELDP H L NIYA+ + ++ +RKEM
Sbjct: 467 IWGALLGASKMHK-NTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEM 525
Query: 352 RIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+ G++K P CSW+ ++ VH+FS+ D P +
Sbjct: 526 KDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKV 561
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 4/223 (1%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS---LFGEMMAHGFSPLN 121
Y G + A +FD M +D + WTSMI+GY Q+ + A + LF EM+ G P
Sbjct: 136 YAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNE 195
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
+ L G + G+Q+HG K ++ ++ + +SLV MYA+CGE+ +S +F
Sbjct: 196 FALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDE 255
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+ ++++SWN++I G + G EAL ++ M G T+ +L + + G +++G
Sbjct: 256 LESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQG 315
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
L M+ S G+ +++++ ++G + DA++ RL
Sbjct: 316 KWLHAHMMKSGKKLVGYVGN-TLLHMYAKSGNICDAKKVFDRL 357
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L QG+ +H + + + DL+++NS++ MYAKCG ++ + ++F M +D ++W SMI G
Sbjct: 107 LKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITG 166
Query: 197 LSDHGRASEALTVYETMLEF---GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
S G AS A T LE GL P+ ++ C G G ++ + YG
Sbjct: 167 YSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQI-HGCCWKYG 225
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
Q S++++ R G+++++ V N W AL+
Sbjct: 226 FQENVFVGSSLVDMYARCGELRES-RLVFDELESKNEVSWNALI 268
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 207/357 (57%), Gaps = 4/357 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+I+ Y G + A ++F+++ +N ++W M+ GY G++ A +F+SM +RD
Sbjct: 153 NSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVR 212
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W+S I GYV+ EA+++F +M A G T + A + L +GR +H
Sbjct: 213 SWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYI 272
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRASE 205
+ + ++L+ SLV MYAKCG I+++ +F + + D WN+MI GL+ HG E
Sbjct: 273 IDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEE 332
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
+L +++ M G+ D +T+L +L ACAH GLV + W F S+V G+ P +HY ++
Sbjct: 333 SLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKR-GMTPTSEHYACMV 391
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
++L RAG++ A +F+ ++P+EP ++ GA+ C ++ + D+A ++L+ELDP N
Sbjct: 392 DVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGC-INHRNFDLAETVGRKLIELDPNND 450
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
++ L N+YA R + S+R+ M +GV+K+PG S++ + H F + D+ P
Sbjct: 451 GRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVEISEIHHRFIAHDKTHP 507
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 35/269 (13%)
Query: 63 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 122
S ++G + + +F + +W +I GY ++ ++S+F +M+ HG +P
Sbjct: 56 SALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYL 115
Query: 123 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 182
T+ L A ++ G +H +KT +E D ++NSL+ MYA CG I ++++F +M
Sbjct: 116 TYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESM 175
Query: 183 AYRDKISWNSMIMGLSDHGRAS-------------------------------EALTVYE 211
++ +SWNSM+ G + G + EA+ V+E
Sbjct: 176 QGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFE 235
Query: 212 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 271
M G + VT + VL+ACAH G + KG + ++++ L S++++ +
Sbjct: 236 KMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNL-LPMTMVLQTSLVDMYAKC 294
Query: 272 GKVKDAEEFVLR--LPVEPNHAIWGALVG 298
G +++A FV R + + IW A++G
Sbjct: 295 GAIEEA-LFVFRGISKSQTDVFIWNAMIG 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 26/161 (16%)
Query: 116 GFSP------LNGTFAVLFGAMGSVAYLDQGRQLH--GMQVKTIYEYDLILENSLVSMYA 167
G SP +NGT L S+ L ++LH G+ +EY I + S +
Sbjct: 3 GVSPSCKTANINGTLLSLLDKCKSMLEL---KKLHAIGISYGLSHEYSFIFKILSFSALS 59
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
G+ID SYR+FS ++ SWN +I G S+ +L+++ ML G+ PD +T+
Sbjct: 60 NSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPF 119
Query: 228 VLTACA-----------HAGLVDKGWE----LFNSMVNSYG 253
++ A A HA ++ G E + NS+++ Y
Sbjct: 120 LVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYA 160
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 197/331 (59%), Gaps = 3/331 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM--AHG 116
T ++ Y G V A +F +MPD++ ++W++MI+ Y +NE+ +A+ LF MM A
Sbjct: 218 TTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACD 277
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
P T + A S+A L+ G+ +H ++ + L + N+L++MY +CGEI
Sbjct: 278 TVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQ 337
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
R+F M RD ISWNS+I HG +A+ ++E M+ G+ P +TF+ VL AC+HAG
Sbjct: 338 RVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAG 397
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
LV++ LF SM+N Y + P +HY ++++LGRA ++ +A E + + +P +WG+L
Sbjct: 398 LVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSL 457
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + + ++A RA+ L EL+P NA +V L +IYA + ++ +RK++ +G+
Sbjct: 458 LGSCRI-HCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGL 516
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+K P CSWI VK +++ S + P +E++
Sbjct: 517 QKIPSCSWIEVKRKIYSLVSIEEYNPQIEEL 547
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I+ Y G V AC +FD ++ W ++ + + L+G+M G
Sbjct: 113 TKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIP 172
Query: 119 PLNGTFAVLFGAMG----SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
T+ + A S+ L +G+++H ++ YE + + +L+ +YA+ G +
Sbjct: 173 SNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSY 232
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTAC 232
+ +F M ++ +SW++MI + + +AL +++ M+ P+ +T + VL AC
Sbjct: 233 ASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQAC 292
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEP 288
A ++ G +V++Y L+ G D + ++N L GR G++ + V +
Sbjct: 293 ASLAALEHG-----KLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQR-VFDYMKKR 346
Query: 289 NHAIWGALVGVCGL 302
+ W +L+ + G+
Sbjct: 347 DVISWNSLISIYGM 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
+P TF +L + L G +H V + + D L L++MY G +D + +
Sbjct: 71 NPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACK 130
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F + WN++ L+ R + L +Y M G+ + T+ VL AC + L
Sbjct: 131 VFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSEL 190
Query: 238 ----VDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPN 289
+ KG E ++++ L+ G++ ++ ++ L R G V A +P + N
Sbjct: 191 SICPLRKGKE-----IHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMP-DKN 244
Query: 290 HAIWGALVG 298
W A++
Sbjct: 245 IVSWSAMIA 253
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 211/426 (49%), Gaps = 41/426 (9%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTV------PIRN 54
MY G A EG +N S N+MI+GY Q G+ E+A F + P R
Sbjct: 263 MYFECGCERIARLVFEGMINKCA-VSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRV 321
Query: 55 KI---------------------------------AWTCMISGYLSAGQVFKACDLFDSM 81
I ++S Y +V A +F+++
Sbjct: 322 AIMAALTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENL 381
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ ++ W +MI GY QN + EA+ LF M + P T + A+ ++ +
Sbjct: 382 KKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAK 441
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+HG+ ++T + D+ + +L+ MYAKCG + ++F M R I+WN+MI G HG
Sbjct: 442 WIHGLAIRTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHG 501
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
EA+ +++ M + + P+ TFL V++AC+H+G V++G F SM YGL+P DHY
Sbjct: 502 LGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHY 561
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
++++LLGRAGK+ A + +P++P + GA++G C + K + ++ +A +L ELD
Sbjct: 562 SAVVDLLGRAGKLHGAWNLIEEMPIKPGITVLGAMLGACKIHK-NVELGEKAADKLFELD 620
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
P HV L N+Y + ++ +R M KG+ K PGCS++ ++ VH F SG
Sbjct: 621 PDEGGYHVLLANMYVSASMWDKVAKVRTAMEKKGIHKTPGCSFVELRNEVHTFYSGSTNH 680
Query: 382 PHVEDI 387
P + I
Sbjct: 681 PQAKKI 686
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I+ + G + +A +FD++ + + + +M+ GY +N + +A+ + M G
Sbjct: 56 TKLINMFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVR 115
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P+ FA L G L++GR++HG + +EYDL ++ Y KCGEIDD++++
Sbjct: 116 PVVYDFAYLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKV 175
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F ++ +D +SW S+I G + +G AL ++ M E GL D+VT + +L A A +
Sbjct: 176 FERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDL 235
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLL 268
G ++ Y L+ GF+ +S+IN L
Sbjct: 236 RIG-----KSIHGYALRLGFESKVSVINAL 260
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 12/266 (4%)
Query: 39 QLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS 94
+LEK +E+ V + + + ++ Y+ G++ A +F+ + ++D ++WTS+I+
Sbjct: 133 ELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSWTSLIA 192
Query: 95 GYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 154
GY QN A+ LF M G + T + A+ + L G+ +HG ++ +E
Sbjct: 193 GYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIGKSIHGYALRLGFES 252
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 214
+ + N+L+ MY +CG + +F M + +SWN+MI G + G++ EA + ML
Sbjct: 253 KVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKML 312
Query: 215 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN-LLGRAGK 273
+ G+ P V + LTACA G +++G V+ LQ D + ++N LL K
Sbjct: 313 DEGVEPTRVAIMAALTACADLGDLERG-----RFVHKLVLQKKLDFEVPVMNSLLSMYSK 367
Query: 274 VK--DAEEFVLRLPVEPNHAIWGALV 297
K D + + + W A++
Sbjct: 368 CKRVDLAASIFENLKKKTNVTWNAMI 393
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 203/346 (58%), Gaps = 4/346 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
DD ++I+ YV+ G++ + +FD + +N I+ T +ISGY++ G A +F
Sbjct: 176 DDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTL 235
Query: 83 DRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
D+D + + +MI GY + +E ++ ++ +M F P TFA + GA +A + G
Sbjct: 236 DKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGE 295
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+ +KT + + L ++L+ MY+KCG + D+ R+F +M ++ SW SMI G +G
Sbjct: 296 QVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNG 355
Query: 202 RASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
EAL +++ M +E+ + P+ VTFL LTACAHAGLV++GWE+F SM + Y L+P +H
Sbjct: 356 FPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEH 415
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y +++LLGRAG + A EFV R+P PN +W AL+ C + + ++A A L +L
Sbjct: 416 YACMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRI-HGNIEMAKLAANELFKL 474
Query: 321 DPLNAPG-HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+ PG +VAL N A + ++ LR+ M+ KG+ K CSW+
Sbjct: 475 NAYGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 50/275 (18%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ + + A +FD + DR A+ MI GY++N + E++ LF ++ G P TF
Sbjct: 82 YIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTF 141
Query: 125 AVLFGAM------GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI------ 172
+++ A G V D GR +H +K E D +L +L+ Y K G +
Sbjct: 142 SMILKASTNRVSNGMVG--DLGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTV 199
Query: 173 -------------------------DDSYRIFSNMAYRDKISWNSMIMGLSDHGR-ASEA 206
DD+ IF +D + +N+MI G S A +
Sbjct: 200 FDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRS 259
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI---- 262
L VY M P+ TF ++ AC+ + G V + ++ F I
Sbjct: 260 LEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIG-----EQVQAQLMKTPFFAVIKLGS 314
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
++I++ + G+V DA+ V +E N W +++
Sbjct: 315 ALIDMYSKCGRVIDAQR-VFDHMLEKNVFSWTSMI 348
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 210/351 (59%), Gaps = 1/351 (0%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
++I+ Y + G+L+ A+ +FD + +RN ++W MI GY+ G V A LFD +P ++ ++
Sbjct: 131 ALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVS 190
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
WT +I G+V+ E EA+ F EM G P T + A ++ L G +H + +
Sbjct: 191 WTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVM 250
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
K + ++ + NSL+ MYA+CG I+ + ++F M+ R+ +SWNS+I+G + +G A +AL+
Sbjct: 251 KKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALS 310
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+ +M + GL P+ V++ LTAC+HAGL+D+G ++F + + P +HY +++L
Sbjct: 311 FFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLY 370
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGH 328
RAG++K+A + + ++P+ PN + G+L+ C ++ D ++A + K +EL P +
Sbjct: 371 SRAGRLKEAWDVIKKMPMMPNEVVLGSLLAAC-RTQGDVELAEKVMKYQVELYPGGDSNY 429
Query: 329 VALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
V NIYAA + + +R+EM+ +G++K S I + +H F SGD+
Sbjct: 430 VLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDK 480
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG---SVAYLDQGRQ 142
+++WTS IS + +N +A S F +M+ P + T L A S + G
Sbjct: 52 TVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAA 111
Query: 143 LHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
LH K + D+++ +L+ MYAKCG++D + +F M R+ +SWN+MI G +G
Sbjct: 112 LHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNG 171
Query: 202 RASEALTV------------------------YETMLEF-------GLYPDTVTFLGVLT 230
+AL + YE LE G+ PD VT + +++
Sbjct: 172 DVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIIS 231
Query: 231 ACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
ACA+ G + G W + +V + S+I++ R G ++ A +
Sbjct: 232 ACANLGALGLGLW--VHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQ 279
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 207/397 (52%), Gaps = 38/397 (9%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYL----------------SAGQV 71
N +I Y + G L +A+ +FD + ++ ++W M++GY GQ
Sbjct: 158 NGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQK 217
Query: 72 FKACDLFDSMP---------------------DRDSIAWTSMISGYVQNELIAEAISLFG 110
C + MP ++ I+W MI Y++N L +A+ L+
Sbjct: 218 PDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYL 277
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
+M P TFA + A G ++ L GR++H K +L+LENSL+ MYA+CG
Sbjct: 278 QMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCG 337
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+DD+ R+F M +RD SW S+I G+ A+ ++ ML G PD++ F+ +L+
Sbjct: 338 CLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILS 397
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
AC+H+GL+D+G F M + Y + P +HY +++LLGRAG+V +A + ++P+EPN
Sbjct: 398 ACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNE 457
Query: 291 AIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKE 350
+W L+ C + T+ D+ A LL+L P + +V L NIYA R E+T +R
Sbjct: 458 RVWATLLSSCRVF-TNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSV 516
Query: 351 MRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
M+ K +RK PG S + + +VH F +GD P ++I
Sbjct: 517 MKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEI 553
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y + G+ +FD M DR+ + + MI YV N + + +F EM+ GF P
Sbjct: 59 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
N T+ + A L G +HG +K +++L + N L++MY KCG + ++ R+F
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
M ++D +SWNSM+ G + + R +AL + M ++G PD T ++ A A+
Sbjct: 179 EMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS 234
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 209/351 (59%), Gaps = 8/351 (2%)
Query: 22 FDDQ------SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKAC 75
FDD + +S+I GY + G L+ A++LF+ +P R+ ++W MI+GY+ G++ A
Sbjct: 166 FDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESAR 225
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
LFD P +D ++W +MI+GYV L +A+ LF EM G P T L A +
Sbjct: 226 MLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLG 285
Query: 136 YLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
L+ G+++H ++ ++ + +L N+L+ MYAKCG I +S +F ++ +D ISWNS+I
Sbjct: 286 DLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVI 345
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+G++ HG E+L++++ M + P+ +TF+GVL AC+HAG +D+G++ F+ M + Y +
Sbjct: 346 VGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKI 405
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
+P H ++++LGRAG +K+A +F+ + +EPN IW L+ C + D ++A A
Sbjct: 406 EPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKV-HGDVELAKVAN 464
Query: 315 KRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
++L + ++ +V + N+YA+ +RK M GV K G S++
Sbjct: 465 EKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFV 515
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 62/230 (26%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A LF +P D+ + MI G Q+ AISL+ EM H + TF + A
Sbjct: 61 AHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTR 120
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI-------DDS----------- 175
+ +++ G +HGM ++ + + ++ N+L+ +AKCG++ DDS
Sbjct: 121 LFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSL 180
Query: 176 -------------YRIFSNMAYRDKISWNSMIMGLSDHGR-------------------- 202
++F+ M RD +SWN MI G G
Sbjct: 181 IAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWN 240
Query: 203 -----------ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+ +AL ++ M G++PD VT L +L+ACA G ++ G
Sbjct: 241 AMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENG 290
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 189/304 (62%), Gaps = 1/304 (0%)
Query: 40 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 99
++ A E+F+ +P ++ I+WT MI +++ G++ K +LFD++ ++D WT +ISG+V N
Sbjct: 205 VDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEKDDFVWTVLISGFVSN 264
Query: 100 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 159
E EA+ + M G P T + + A S+ L++G Q+H +K EYDL ++
Sbjct: 265 EEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQ 324
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
NSL+S YAKCG + D+Y+IF ++ + +S NS+I G + +G EAL +Y+ M L
Sbjct: 325 NSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGEEALNMYKRMQNESLE 384
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
P+ VTFL VL+AC HAGL+++G LF++M + Y +P DHY +++LLGRAG + +A +
Sbjct: 385 PNRVTFLAVLSACTHAGLIEEGRNLFDTMKSRYRNEPDADHYACMVDLLGRAGLLDEAND 444
Query: 280 FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 339
+ + V+P+ +WGAL+ + D+A A + + +L+P NA +V L N+Y+A
Sbjct: 445 LIRSITVKPHSGVWGALLAASS-AHLRLDLAKLAAQHITKLEPANATPYVVLSNLYSAAG 503
Query: 340 RHIE 343
+ IE
Sbjct: 504 QKIE 507
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 28 NSMINGYVQAGQLEKAQELFDTV--PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
N+++NGY++ G+ +A +F+ V R+ ++W+ ++ G G++ A LFD MP+R+
Sbjct: 75 NALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPERN 134
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLH 144
++W++MI GY++ L F EM G +N T ++ G+ + G Q+H
Sbjct: 135 VVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIH 194
Query: 145 GMQVKTIYEY--------------DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 190
G+ + +E+ DLI +++ + G + +F + +D W
Sbjct: 195 GLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEKDDFVW 254
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
+I G + EAL Y M G P+ +T VL A A +++G ++ +S V
Sbjct: 255 TVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQI-HSHVL 313
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAI 292
L+ S+I+ + G V DA + V+ L V N+++
Sbjct: 314 KMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSV 358
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 42/226 (18%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
+N + WT M+ Y GQ+ A LFD MP+R + + +MISGY+ L A L E+
Sbjct: 4 KNIVTWTAMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYI---LKARKFHLAEEL 60
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ + F D + N+L++ Y K GE
Sbjct: 61 ----YREVPCEFR-----------------------------DPVCSNALMNGYLKIGET 87
Query: 173 DDSYRIFSNM--AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+++ R+F N+ + RD +SW+++++GL GR A +++ M E + V++ ++
Sbjct: 88 NEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPE----RNVVSWSAMID 143
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 276
GL + G+ F M ++ +I G G VKD
Sbjct: 144 GYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKD 189
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 214/376 (56%), Gaps = 7/376 (1%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKAC 75
+F+ +L++++ Q++ +++ T+ I+ I ++ Y + +A
Sbjct: 384 DFNQTTLSTVLKSVASLQQIKVCKQIH-TLSIKCGIYSDFYVINSLLDTYGKCSHIDEAS 442
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+F+ D +A+TSMI+ Y Q+ EA+ L+ +M P + L A +++
Sbjct: 443 KIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLS 502
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+QG+QLH +K + D+ NSLV+MYAKCG I+D+ R FS + R +SW++MI
Sbjct: 503 AYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIG 562
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL+ HG EAL ++ ML+ + P+ +T + VL AC HAGLV++G + F +M +G++
Sbjct: 563 GLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIK 622
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
P +H+ +I+LLGR+GK+ +A E V +P E + ++WGAL+G + K + ++ +A +
Sbjct: 623 PTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHK-NVELGEKAAE 681
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFS 375
RL L+P + V L NIYA+ + ++RK M+ V+K PG SWI VK R+H F
Sbjct: 682 RLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFI 741
Query: 376 SGDRLEPHVEDILLQI 391
GDR ++I ++
Sbjct: 742 VGDRNHSRSDEIFAKL 757
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 9/246 (3%)
Query: 61 MISGYLSAGQVFKACDLFD-SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+++ Y ++ + AC+L D S R ++W+++IS YVQN EA+ F EM G
Sbjct: 22 LLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKS 81
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
TF + A L+ G+++H M V + +E D + N+LV MYAKCG+ DS ++F
Sbjct: 82 NEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLF 141
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ +SWN++ +E + +++ M+E + P+ + +L AC AGL D
Sbjct: 142 GMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNAC--AGLRD 199
Query: 240 KGW-ELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G + ++ G G D + +++++ +AG+++DA + V R + P+ W A+
Sbjct: 200 GGIGRTVHGLLMKLG--HGLDQFSANALVDMYAKAGRIEDAVD-VFREMIHPDTVSWNAI 256
Query: 297 VGVCGL 302
+ C L
Sbjct: 257 IAGCVL 262
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 78 FDSMPDRDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+D MP +D I A ++ISGY Q +AISLF E+ T + + ++ S+
Sbjct: 343 YDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQ 402
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ +Q+H + +K D + NSL+ Y KC ID++ +IF + D +++ SMI
Sbjct: 403 IKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITA 462
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
S HG A EAL +Y M + PD +L ACA+ ++G +L + +G
Sbjct: 463 YSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIK-FGFMS 521
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
S++N+ + G ++DA+ +P + W A++G
Sbjct: 522 DIFASNSLVNMYAKCGSIEDADRAFSEIP-QRGIVSWSAMIG 562
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y GQ + LF + + ++W ++ S +VQ++ +AE + LF M+ P +
Sbjct: 128 YAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSL 187
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+++ A + GR +HG+ +K + D N+LV MYAK G I+D+ +F M +
Sbjct: 188 SIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIH 247
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
D +SWN++I G H AL + M + G P+ T L ACA GL D G ++
Sbjct: 248 PDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQI 307
Query: 245 FNSMVNSYGLQPGFDHYISI--INLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
+ V + D ++++ I+L + + DA +P + +H I G
Sbjct: 308 HSCSVK---IDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTK-DHIIAG 355
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
++ + ++ Y AG++ A D+F M D+++W ++I+G V +E A+ L EM
Sbjct: 218 DQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMK 277
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P T + A ++ D GRQ+H VK + DL + L+ +Y+KC +D
Sbjct: 278 KSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMD 337
Query: 174 DSYRIFSNMAYRDK-ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
D+ R + M +D I+ N++I G S G +A++++ + + + T VL +
Sbjct: 338 DARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSV 397
Query: 233 A-----------HAGLVDKG----WELFNSMVNSYGLQPGFDH---------------YI 262
A H + G + + NS++++YG D Y
Sbjct: 398 ASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYT 457
Query: 263 SIINLLGRAGKVKDAEEFVLRLPV---EPNHAIWGALVGVCG 301
S+I + G ++A + L++ V +P+ + +L+ C
Sbjct: 458 SMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACA 499
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 198/348 (56%), Gaps = 6/348 (1%)
Query: 45 ELFDTVPIRNKIAWTCMISG-----YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 99
E+ +V +RN + Y + G A +F+ M +RD +AW S+I+G+ N
Sbjct: 160 EMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFALN 219
Query: 100 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 159
EA+SLF EM G P T LF A + L+ GR++H +K +L +
Sbjct: 220 GKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVN 279
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
NSL+ YAKCG I ++ ++FS M+ R+ +SW S+++GL+ +G EAL +++ M +
Sbjct: 280 NSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIV 339
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
P +TF+GVL AC+H G++D+G+ F M YG++P +HY +++LL RAG VK A E
Sbjct: 340 PREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYE 399
Query: 280 FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 339
++ +P++PN IW L+G C + D + A LL+L+P ++ +V L N+YA+
Sbjct: 400 YIQSMPMQPNAVIWRTLLGACTV-HGDLSLGEIARSHLLKLEPKHSGDYVLLSNLYASER 458
Query: 340 RHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
R ++ ++R+ M GV K PG S + + RV F+ GDR P +D+
Sbjct: 459 RWSDVQTVRRSMIEDGVWKTPGYSLVELGNRVFEFTMGDRSHPRSQDV 506
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A ++F + + + W +MI GY +++ A+ L+ +M+ P T+ L A+
Sbjct: 93 AHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISK 152
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ G +H + V+ +E + + NSL+ +YA CG+ + +Y++F M RD ++WNS+
Sbjct: 153 SLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSV 212
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I G + +G+ +EAL+++ M G+ PD T + + +ACA G ++ G + ++ G
Sbjct: 213 INGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLK-VG 271
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
L S+++ + G +++A++ + E N W +LV
Sbjct: 272 LTGNLHVNNSLLDFYAKCGSIREAQQVFSEMS-ERNVVSWTSLV 314
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 203/367 (55%), Gaps = 6/367 (1%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----DR 84
+++ Y + + AQ FD + R+ W +ISGY Q+ K +L + M +
Sbjct: 446 ALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEP 505
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+ W S+++G V+N+ A+ LF EM P T ++ A +A + +G+Q+H
Sbjct: 506 NVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVH 565
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
++ Y+ D + +LV MYAKCG I Y++++ ++ + + N+M+ + HG
Sbjct: 566 AYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGE 625
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
E + ++ ML+ + PD VTFL VL++C HAG + G+E F ++ +Y + P HY +
Sbjct: 626 EGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECF-YLMETYNITPTLKHYTCM 684
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LL RAGK+ +A + + +P+E + W AL+G C + K A + A ++L+EL+P N
Sbjct: 685 VDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVA-LGEIAAEKLIELEPSN 743
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
+V L N+YA+ R +L R+ M KG++K+PGCSWI + VH+F + D+ V
Sbjct: 744 TGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRV 803
Query: 385 EDILLQI 391
E+I +
Sbjct: 804 EEIYFML 810
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 133/267 (49%), Gaps = 40/267 (14%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----D 83
N++I+ Y + G L++A+++ + + ++ ++W +I+ ++ G V++A DL ++M +
Sbjct: 173 NALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELE 232
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
+ + W+++I G+ N E++ LF M+ G +P T A + A + +L G++L
Sbjct: 233 PNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKEL 292
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY------------------- 184
HG V+ + + N+LV MY +CG++ +++IFS A
Sbjct: 293 HGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNV 352
Query: 185 ----------------RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
RD+ISWN MI G D+ +AL ++ +L G+ PD+ T +
Sbjct: 353 GKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSI 412
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQ 255
LT A + +G E+ +S+ GLQ
Sbjct: 413 LTGFADMTCIRQGKEI-HSIAIVKGLQ 438
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 5/233 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----D 83
N+++ Y + G ++ A ++F + ++ MI GYL G V KA +LF M +
Sbjct: 309 NALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVE 368
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
RD I+W MISG+V N + +A+ LF +++ G P + T + + + QG+++
Sbjct: 369 RDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEI 428
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H + + + + + +LV MY KC +I + F ++ RD +WN++I G + +
Sbjct: 429 HSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQI 488
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ + E M G P+ T+ +L D +LFN M S L+P
Sbjct: 489 GKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVS-SLRP 540
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 9/251 (3%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG--TFAVLFGAM 131
A +FD M ++ +WT+++ ++ L + LF E + G F V+
Sbjct: 85 AWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNIC 144
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
+ L+ GRQ+HGM +K + ++ + N+L+ MY KCG +D++ ++ M +D +SWN
Sbjct: 145 CGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWN 204
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
S+I +G EAL + E ML L P+ VT+ V+ + + ELF MV +
Sbjct: 205 SIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGA 264
Query: 252 YGLQPGFDHYISIINLLGRAGKV---KDAEEFVLRLPVEPNHAIWGALVGV---CGLSKT 305
G+ P S++ R + K+ +++R + N + ALVG+ CG K+
Sbjct: 265 -GVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKS 323
Query: 306 DADVASRATKR 316
+ S+ ++
Sbjct: 324 AFKIFSKFARK 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 17/250 (6%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L G+QLH +KT + ++ L+ MY+ +D++ +F M ++ SW +++
Sbjct: 47 LTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRL 106
Query: 197 LSDHGRASEALTVYETMLEFGLYP--DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+ G + ++E L GL D F VL C G ++ G ++ + MV +G
Sbjct: 107 HLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQV-HGMVLKHGF 165
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
++I++ G+ G + +A++ VL + + W +++ C + +
Sbjct: 166 VTNVYVGNALIDMYGKCGSLDEAKK-VLEGMTQKDCVSWNSIITACVANGVVYEALDLLE 224
Query: 315 KRLL-ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK--------APGCS-- 363
LL EL+P N A+ +++N +E L M GV P CS
Sbjct: 225 NMLLSELEP-NVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRM 283
Query: 364 -WILVKGRVH 372
W+ V +H
Sbjct: 284 KWLFVGKELH 293
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 214/376 (56%), Gaps = 7/376 (1%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKAC 75
+F+ +L++++ Q++ +++ T+ I+ I ++ Y + +A
Sbjct: 384 DFNQTTLSTVLKSVASLQQIKVCKQIH-TLSIKCGIYSDFYVINSLLDTYGKCSHIDEAS 442
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+F+ D +A+TSMI+ Y Q+ EA+ L+ +M P + L A +++
Sbjct: 443 KIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLS 502
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+QG+QLH +K + D+ NSLV+MYAKCG I+D+ R FS + R +SW++MI
Sbjct: 503 AYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIG 562
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL+ HG EAL ++ ML+ + P+ +T + VL AC HAGLV++G + F +M +G++
Sbjct: 563 GLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIK 622
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
P +H+ +I+LLGR+GK+ +A E V +P E + ++WGAL+G + K + ++ +A +
Sbjct: 623 PTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHK-NVELGEKAAE 681
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFS 375
RL L+P + V L NIYA+ + ++RK M+ V+K PG SWI VK R+H F
Sbjct: 682 RLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFI 741
Query: 376 SGDRLEPHVEDILLQI 391
GDR ++I ++
Sbjct: 742 VGDRNHSRSDEIFAKL 757
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 9/246 (3%)
Query: 61 MISGYLSAGQVFKACDLFD-SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+++ Y ++ + AC+L D S R ++W+++IS YVQN EA+ F EM G
Sbjct: 22 LLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKS 81
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
TF + A L+ G+++H M V + +E D + N+LV MYAKCG+ DS ++F
Sbjct: 82 NEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLF 141
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ +SWN++ +E + +++ M+E + P+ + +L AC AGL D
Sbjct: 142 GMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNAC--AGLRD 199
Query: 240 KGW-ELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G + ++ G G D + +++++ +AG+++DA + V R + P+ W A+
Sbjct: 200 GGIGRTVHGLLMKLG--HGLDQFSANALVDMYAKAGRIEDAVD-VFREMIHPDTVSWNAI 256
Query: 297 VGVCGL 302
+ C L
Sbjct: 257 IAGCVL 262
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 78 FDSMPDRDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+D MP +D I A ++ISGY Q +AISLF E+ T + + ++ S+
Sbjct: 343 YDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQ 402
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ +Q+H + +K D + NSL+ Y KC ID++ +IF + D +++ SMI
Sbjct: 403 IKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITA 462
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
S HG A EAL +Y M + PD +L ACA+ ++G +L + +G
Sbjct: 463 YSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIK-FGFMS 521
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
S++N+ + G ++DA+ +P + W A++G
Sbjct: 522 DIFASNSLVNMYAKCGSIEDADRAFSEIP-QRGIVSWSAMIG 562
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y GQ + LF + + ++W ++ S +VQ++ +AE + LF M+ P +
Sbjct: 128 YAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSL 187
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+++ A + GR +HG+ +K + D N+LV MYAK G I+D+ +F M +
Sbjct: 188 SIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIH 247
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
D +SWN++I G H AL + M + G P+ T L ACA GL D G ++
Sbjct: 248 PDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQI 307
Query: 245 FNSMVNSYGLQPGFDHYISI--INLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
+ V + D ++++ I+L + + DA +P + +H I G
Sbjct: 308 HSCSVK---IDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTK-DHIIAG 355
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 34/275 (12%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y AG++ A D+F M D+++W ++I+G V +E A+ L EM G P
Sbjct: 225 LVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPN 284
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A ++ D GRQ+H VK + DL + L+ +Y+KC +DD+ R +
Sbjct: 285 VFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYD 344
Query: 181 NMAYRDK-ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA------ 233
M +D I+ N++I G S G +A++++ + + + T VL + A
Sbjct: 345 LMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIK 404
Query: 234 -----HAGLVDKG----WELFNSMVNSYGLQPGFDH---------------YISIINLLG 269
H + G + + NS++++YG D Y S+I
Sbjct: 405 VCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYS 464
Query: 270 RAGKVKDAEEFVLRLPV---EPNHAIWGALVGVCG 301
+ G ++A + L++ V +P+ + +L+ C
Sbjct: 465 QHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACA 499
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 213/410 (51%), Gaps = 40/410 (9%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
N+D S+++ YV+ LEKAQ + +N AW +ISGY GQ +A L +
Sbjct: 426 NYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQ 485
Query: 81 M------PD---------------------------------RDSIAWTSMISGYVQNEL 101
M PD + ++WT++ISG QNE
Sbjct: 486 MVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEK 545
Query: 102 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 161
+A+ +F +M A P + T L A + L +G +LH +K + D+ + +
Sbjct: 546 YMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATA 605
Query: 162 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
L+ MY++ G++ +Y +F+ + + WN M+MG + H E + +Y+ M E + PD
Sbjct: 606 LIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPD 665
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 281
+TF +L+AC ++GLVD+GW+ F+SM Y + P +HY +++LLG++G + +A F+
Sbjct: 666 AITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFI 725
Query: 282 LRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 341
+P++P+ +IWGAL+ C + K + +A A ++L +++P N+ +V + N+Y++ +R
Sbjct: 726 ETMPIKPDASIWGALLASCKIHK-NIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRW 784
Query: 342 IELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ + L+ M + ++ P SW V +HVFS+ R P +I ++
Sbjct: 785 VAVERLKHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGRPHPEEGEIYFEL 834
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 137/284 (48%), Gaps = 11/284 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVP--IRNKIAWTCMISGYLSAGQVFKACDLFD-----S 80
NS+I+ Y + + + A+ +FD++ RN +W +I Y G + A D S
Sbjct: 294 NSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECS 353
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
D I W S++SGY+ ++ F + + GF P + + A+ + + G
Sbjct: 354 GIKPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLG 413
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+++HG +++ YD+ + SLV MY K ++ + + ++ +WNS+I G S
Sbjct: 414 KEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFK 473
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G+ EA+ + M+E G+ PD VT+ G+++ + G +D+ + N + S G+ P
Sbjct: 474 GQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINR-IKSSGITPNVVS 532
Query: 261 YISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCG 301
+ ++I+ + K DA + ++ V+PN +L+ C
Sbjct: 533 WTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACA 576
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + KA +F P ++ W +++ +++E A+ LF +M
Sbjct: 195 LINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKAT 254
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
GT + A G + L++G+QLHG ++ + ++ NS++SMY++ + +F
Sbjct: 255 VGTTVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFD 314
Query: 181 NMA--YRDKISWNSMIMGLSDHGRASEAL-TVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+M R+ SWNS+I + G ++AL T+ M G+ PD +T+ +L+ G
Sbjct: 315 SMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGS 374
Query: 238 VDKGWELFNSMVNSYGLQP 256
+ F S+ +S G +P
Sbjct: 375 FEMVLTSFRSL-HSLGFKP 392
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 8/222 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA----EAISLFGEMMAHG 116
M+ YL G A +F R+ + W S + + E E + +F EM + G
Sbjct: 93 MMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLEEF---ESFGGDPFEILVVFNEMYSKG 149
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
+ F + ++ G ++H +K + D+ L +L++ Y KC ID +
Sbjct: 150 VEFDSKAFTFVLKICLALREFLFGLEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKAN 209
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
++F Y++ WN+++M R AL ++ M T + +L AC
Sbjct: 210 QVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLK 269
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
+++G +L + +GL SII++ R + K A
Sbjct: 270 ALNEGKQLHGYALR-FGLVSNTLVCNSIISMYSRNSRFKLAR 310
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 200/343 (58%), Gaps = 11/343 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPI---RNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
++++ + + G LE A ++F+ + + R+ + W MIS Y G + A LFD MP R
Sbjct: 292 TALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQR 351
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQGRQ 142
D+++W SMI+GY QN +AI LF EM++ S P T +F A G + L G
Sbjct: 352 DTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNW 411
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+ + + + NSL++MY++CG + D+ IF MA RD +S+N++I G ++HG
Sbjct: 412 AVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGH 471
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
E++ + M E G+ PD +T++ +LTAC+HAGL+D+G LF S+ P DHY
Sbjct: 472 GMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYA 526
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+I++LGRAG++++A + + +P+EP+ I+G+L+ + K ++ A +L +++P
Sbjct: 527 CMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHK-QVELGELAAAKLFKVEP 585
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
N+ + L NIYA+ R E +R MR +GV+K G SW+
Sbjct: 586 HNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWL 628
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 160/341 (46%), Gaps = 50/341 (14%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----DTVPIRNKI 56
+Y+ +G +++A + + + N MI+GY + G E+A LF D RN I
Sbjct: 128 IYAKYGPIEFARKLFD-EMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVI 186
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
WT MI+G+ G + A FD MP+R ++W +M+SGY Q E I LF +M++ G
Sbjct: 187 TWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPG 246
Query: 117 -FSPLNGTFAVLFGAMGSV---------------------------AYLDQGRQLHGMQV 148
P T+A + + S+ A LD + ++
Sbjct: 247 NVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEA 306
Query: 149 KT-------IYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+Y+Y + N+++S YA+ G++ + +F M RD +SWNSMI G + +
Sbjct: 307 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQN 366
Query: 201 GRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPG 257
G + +A+ ++E M+ E PD VT + V +AC H G + G W + S++ +Q
Sbjct: 367 GESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAV--SILKVNHIQIS 424
Query: 258 FDHYISIINLLGRAGKVKDA----EEFVLRLPVEPNHAIWG 294
Y S+IN+ R G ++DA +E R V N I G
Sbjct: 425 ISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISG 465
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 30/240 (12%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEA-ISLFGEMMAHGFSPLNGTF-AVLFGAM 131
C +F + D +T M+ Y Q + ++ +SLF M+ H N +F +V+ +
Sbjct: 40 TCHIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSA 99
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
GS + L L K+ Y+ D + N ++ +YAK G I+ + ++F M R WN
Sbjct: 100 GSESMLFLAHVL-----KSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWN 154
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF------ 245
MI G G EA T++ M + + + +T+ ++T A G + F
Sbjct: 155 VMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPER 214
Query: 246 -----NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
N+M++ Y + I + N + G V+P+ W ++ C
Sbjct: 215 SVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN------------VQPDETTWATVISSC 262
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 201/342 (58%), Gaps = 10/342 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPI---RNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
++++ + + G LE A ++F+ + + R+ + W MIS Y G + A LFD MP R
Sbjct: 307 TALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQR 366
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQL 143
D+++W SMI+GY QN +AI LF EM++ S P T +F A G + L G
Sbjct: 367 DTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWA 426
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
+ + + + + NSL+SMY++CG + D+ IF MA RD +S+N++I G ++HG
Sbjct: 427 VSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHG 486
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
E++ + M E G+ PD +T++ +LTAC+HAGL+ +G LF S+ P DHY
Sbjct: 487 MESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIKF-----PDVDHYAC 541
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+I++LGRAG++++A + + +P+EP+ I+G+L+ + K ++ A +L +++P
Sbjct: 542 MIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHK-QVELGELAAAKLFKVEPH 600
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
N+ +V L NIYA+ R + +R MR +GV+K G SW+
Sbjct: 601 NSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWL 642
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 153/322 (47%), Gaps = 51/322 (15%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSL---NSMINGYVQAGQLEKAQELF----DTVPIR 53
+Y+ +G +++A + D+++ N MI+GY + G E+A LF D R
Sbjct: 143 IYAKYGPIEFARKLFD----EMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISR 198
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N I WT MI+G+ G + A FD MP+R ++W +M+SGY Q E I LF +M+
Sbjct: 199 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 258
Query: 114 AHG-FSPLNGTFAVLFGAMGSV---------------------------AYLDQGRQLHG 145
+ G P T+ + + S+ A LD +
Sbjct: 259 SPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGN 318
Query: 146 MQVKT-------IYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
++ +Y+Y + N+++S YA+ G++ + +F M RD +SWNSMI G
Sbjct: 319 LEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGY 378
Query: 198 SDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQ 255
+ +G + +A+ ++E M+ PD VT + V +AC H G + G W + S++ +Q
Sbjct: 379 TQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAV--SILKENHIQ 436
Query: 256 PGFDHYISIINLLGRAGKVKDA 277
Y S+I++ R G ++DA
Sbjct: 437 ISISVYNSLISMYSRCGSMQDA 458
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A LFD MPDR W MISGY + EA
Sbjct: 144 YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA------------------- 184
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ LF MG DQ ++I ++++ +AK G + + F M
Sbjct: 185 STLFHVMG-----DQE-----------ISRNVITWTTMITGHAKKGNLKTARMYFDKMPE 228
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWE 243
R +SWN+M+ G + G E + ++ ML G + PD T++ V+++C+ G
Sbjct: 229 RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSES 288
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV 286
+ + ++ G +P + +++++ + G ++ A + +L V
Sbjct: 289 IVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 45/268 (16%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEA-ISLFGEMMAH-GFSPLNGTFAVLFGAM 131
C +F + D +T M+ Y Q + A+ +SLF M+ H P ++V+ +
Sbjct: 55 TCHIFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSA 114
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
GS + L L K+ Y+ D + N ++ +YAK G I+ + ++F M R WN
Sbjct: 115 GSESMLFLAHVL-----KSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWN 169
Query: 192 SMIMGLSDHGRASEALTVYETM-----------------------------LEFGLYPD- 221
MI G G EA T++ M + F P+
Sbjct: 170 VMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPER 229
Query: 222 -TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
V++ +L+ A G ++ LFN M++ +QP ++++I+ G +E
Sbjct: 230 SVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESI 289
Query: 281 VLRLP----VEPNHAIWGALVGV---CG 301
V +L PN+ + AL+ + CG
Sbjct: 290 VRKLDDTVGFRPNYFVKTALLDMHAKCG 317
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 185/327 (56%), Gaps = 1/327 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y G + A D M +D+++++++ISG VQN +A+ +F +M + G +P
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPY 412
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T L A +A L G HG V + D + N+++ MY+KCG+I S IF
Sbjct: 413 LETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFD 472
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M RD ISWN+MI+G HG EAL++++ + GL PD VT + VL+AC+H+GLV +
Sbjct: 473 RMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTE 532
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G F+SM ++ ++P HYI +++LL RAG + +A F+ R+P PN IWGAL+ C
Sbjct: 533 GKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAAC 592
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
K + ++ + +K++ L P V + NIY++ R + +R R G +K+P
Sbjct: 593 RTHK-NIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSP 651
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDI 387
GCSW+ + G +HVF G + P I
Sbjct: 652 GCSWVEISGVIHVFIGGHQSHPQSASI 678
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 128/236 (54%), Gaps = 10/236 (4%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + T ++ Y +F A +F+++ ++ + W++MI GYV ++ I++A++L+ +M+
Sbjct: 244 NVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDML 303
Query: 114 A-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+G +P T A + A + L +G++LH +K+ + D + NSL+SMYAKCG +
Sbjct: 304 CIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIM 363
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
D++ M +D +S++++I G +G A +AL ++ M G+ P T + +L AC
Sbjct: 364 DNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPAC 423
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYIS----IINLLGRAGKVKDAEEFVLRL 284
+H + G + + Y + GF + S II++ + GK+ + E R+
Sbjct: 424 SHLAALQHG-----TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRM 474
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 120/226 (53%), Gaps = 4/226 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMP--DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
T ++ Y G +++A LF+S+ DRD +AW +MI+ + + L A+ I +M G
Sbjct: 146 TALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAG 205
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
+P + T + +G L QG+ +H ++ + +++L+ +L+ MYAKC + +
Sbjct: 206 VTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYAR 265
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTACAHA 235
+IF+ + ++ + W++MI G H S+AL +Y+ ML +GL P T +L ACA
Sbjct: 266 KIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQL 325
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 281
+ +G +L M+ S G+ S+I++ + G + +A F+
Sbjct: 326 TDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMYAKCGIMDNAVGFL 370
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
++S ++ A +FD +P + W MI Y + ++I L+ M+ G +P N TF
Sbjct: 51 HISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTF 110
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L A S+ L GR +H DL + +L+ MYAKCG + + +F+++++
Sbjct: 111 PFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISH 170
Query: 185 RDK--ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG- 241
+D+ ++WN+MI S H ++ + M + G+ P++ T + +L A + +G
Sbjct: 171 QDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGK 230
Query: 242 ----WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE-------------FVLRL 284
+ + N ++ LQ + +LL A K+ + +VL
Sbjct: 231 AIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHD 290
Query: 285 PVEPNHAIWGALVGVCGLSKTDADVAS--RATKRLLEL 320
+ A++ ++ + GL+ T A +A+ RA +L +L
Sbjct: 291 SISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDL 328
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 186/335 (55%), Gaps = 2/335 (0%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
++ Y G++E A ++FD + R + W MI+G+ G + LF M R ++W
Sbjct: 149 LLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSW 208
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG-MQV 148
MIS Q + EA +F EM+ GF P + T + + +D G +H
Sbjct: 209 NLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADG 268
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
K + + + NSLV Y KCG ++ ++++F+ M ++ +SWN+MI GL +G+ +
Sbjct: 269 KGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVE 328
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
++E M G+ P TF+GVL CAHAG VDKG E+F+SM + L P +HY +++LL
Sbjct: 329 LFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLL 388
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGH 328
GR G VK+A + + +P+ PN A+WGAL+ C + D +VA A K L+ L+P N+ +
Sbjct: 389 GRCGHVKEAYDLIRNMPLMPNAALWGALLSAC-RTHGDREVAEIAAKELVRLEPGNSGNY 447
Query: 329 VALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
V L N+YA + E+ +R M+ G++K PG S
Sbjct: 448 VLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQS 482
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 196/342 (57%), Gaps = 5/342 (1%)
Query: 28 NSMINGYVQAGQLEKAQELF-DTVPI---RNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++I+ Y G A+++F D V + + ++W+ ++ + AG++ A +FD MP+
Sbjct: 144 NALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPE 203
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
RD ++WT M+S Y + + E + LF EM G P T + A + + GR +
Sbjct: 204 RDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMV 263
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H + + + + L NSL+ MY KCG +++++++F + I+WN+M+M ++HG A
Sbjct: 264 HKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYA 323
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A ++E M+ G+ PD VT L +L A AH G VD+G LF SM YG++P +HY +
Sbjct: 324 EDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGA 383
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
++++LGR+G++++A + +P+ N IWGAL+G C + D + R K+LLEL P
Sbjct: 384 VVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRI-HGDVGMGERVIKKLLELKPD 442
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
++ L +IY A R E +R+ M G RK PGCSW+
Sbjct: 443 EGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWV 484
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 196/342 (57%), Gaps = 5/342 (1%)
Query: 28 NSMINGYVQAGQLEKAQELF-DTVPI---RNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++I+ Y G A+++F D V + + ++W+ ++ + AG++ A +FD MP+
Sbjct: 144 NALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPE 203
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
RD ++WT M+S Y + + E + LF EM G P T + A + + GR +
Sbjct: 204 RDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMV 263
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H + + + + L NSL+ MY KCG +++++++F + I+WN+M+M ++HG A
Sbjct: 264 HKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYA 323
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A ++E M+ G+ PD VT L +L A AH G VD+G LF SM YG++P +HY +
Sbjct: 324 EDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGA 383
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
++++LGR+G++++A + +P+ N IWGAL+G C + D + R K+LLEL P
Sbjct: 384 VVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRI-HGDVGMGERVIKKLLELKPD 442
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
++ L +IY A R E +R+ M G RK PGCSW+
Sbjct: 443 EGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWV 484
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 201/371 (54%), Gaps = 7/371 (1%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKI--AWTCMISGYLSAGQVFKACDLFDSMPDR 84
+N +++ Y + G+L A+ + V + AWT ++S Y G+V A LFD M +R
Sbjct: 259 VNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGER 318
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D ++WT+MISGY EA+ LF ++ G P A + L+ GR++H
Sbjct: 319 DVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIH 378
Query: 145 GMQVKTIYEYDLI--LENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS--WNSMIMGLSDH 200
+ + +++V MYAKCG ID + +F + K + +NS+I GL+ H
Sbjct: 379 RQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHH 438
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
GR A ++E M GL PD +TF+ VL+AC H GLVD G +LF SM YG+ P +H
Sbjct: 439 GRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEH 498
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y +++LLGRAG + +A +L++P + N IW AL+ C + D +A A+ L+EL
Sbjct: 499 YGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKV-HGDVALARVASYELVEL 557
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRL 380
+ G+V L N+ + D+H E SLRK + G++K PG S++ + +H F +GD+
Sbjct: 558 QHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKS 617
Query: 381 EPHVEDILLQI 391
P + L +
Sbjct: 618 HPEAKTTELML 628
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y G V A +FD RD +++ +MI+G+ + ++ +FGEM P
Sbjct: 159 LLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPD 218
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI--YEYDLILENSLVSMYAKC--------- 169
TF L + GRQ+HG+ + + + +++L N LV MYAKC
Sbjct: 219 EYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETV 278
Query: 170 ------------------------GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
GE+ + R+F M RD +SW +MI G S G E
Sbjct: 279 LSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQE 338
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
AL ++ + G+ PD V + L+ACA G ++ G +
Sbjct: 339 ALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRI 377
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 10/252 (3%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV- 134
LF + + D W ++I Y Q + SLF M+ P + TF L A +V
Sbjct: 71 LFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVL 130
Query: 135 -AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ G Q+H ++ + D+ + N+L++ Y G++ ++Y++F RD +S+N+M
Sbjct: 131 ISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTM 190
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I G + G S V+ M + PD TF+ +L+ C+ G ++ + G
Sbjct: 191 INGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELG 250
Query: 254 LQPGFDHYIS-IINLLGRAGKVKDAEEFVLRLPVEPNHAI---WGALVGVCGLSKTDADV 309
G ++ ++++ + G++ AE VL + V+P ++ W +LV L + + V
Sbjct: 251 CFGGNVLLVNKLVDMYAKCGRLVMAET-VLSV-VKPGKSVVAAWTSLVSAYAL-RGEVKV 307
Query: 310 ASRATKRLLELD 321
A R ++ E D
Sbjct: 308 ARRLFDQMGERD 319
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 212/377 (56%), Gaps = 4/377 (1%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
Y+ G M A +G ++ D + N MI+GYV+ G+++ A++LFD + ++N I+WT M
Sbjct: 199 YARCGDMVEARKLFDGMVDR-DVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSM 257
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
+ GY G V +A LFD MP+++ ++W +MI GY QN +A+ LF EM + +N
Sbjct: 258 VHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMN 317
Query: 122 G-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A+ ++ LD G +HG + + + + N+LV MYAKCGEI + +F
Sbjct: 318 EVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFE 377
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +D SWN++I G +G A EAL V+ ML G P+ +T VL+AC H GLV++
Sbjct: 378 EMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEE 437
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G F +M +G+ P +HY +I+LLGRAG++ +AE+ + +P +PN I + + C
Sbjct: 438 GRRCFEAM-ERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFAC 496
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ D A R K ++++ A +V L N+YA R ++ +++ M+ +G K
Sbjct: 497 CYFE-DVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNKEV 555
Query: 361 GCSWILVKGRVHVFSSG 377
S I V GR F +G
Sbjct: 556 AWSVIEVDGRFREFVAG 572
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 18/281 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ G V A +FD M R ++WT++I GY + + EA LF M+ +
Sbjct: 162 TSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVA 221
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLH-GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
N V+ + +D R L M+VK + + S+V Y++ G++D++
Sbjct: 222 AFN----VMIDGYVKMGRMDLARDLFDKMRVKNVISW-----TSMVHGYSEDGDVDEARF 272
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAG 236
+F M ++ +SWN+MI G +GR+ +AL ++ M + + VT + VL A A
Sbjct: 273 LFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLS 332
Query: 237 LVD-KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
+D GW + V L +++++ + G++ A + V E + W A
Sbjct: 333 ALDLGGW--VHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKA-KLVFEEMTEKDTGSWNA 389
Query: 296 LV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
L+ GV G +K +V + + E + + ++ CN
Sbjct: 390 LINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACN 430
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
F P + TF ++ QG Q+HG+ +K + DL + SLV MY K G++ +
Sbjct: 119 FRPSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFAR 178
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
++F M+ R +SW ++I+G + G EA +++ M++ D F ++ G
Sbjct: 179 KVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVD----RDVAAFNVMIDGYVKMG 234
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+D +LF+ M + + S+++ G V +A F+ E N W A+
Sbjct: 235 RMDLARDLFDKMRVKNVIS-----WTSMVHGYSEDGDVDEA-RFLFDCMPEKNVLSWNAM 288
Query: 297 V-GVC 300
+ G C
Sbjct: 289 IRGYC 293
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 181/322 (56%), Gaps = 1/322 (0%)
Query: 58 WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 117
+ ++ Y G AC +FD MP RD +AWT +++G+VQ + +A+S F M+
Sbjct: 246 YCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNV 305
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T + A V LDQGR +H + +L SLV MYAKCG +D +
Sbjct: 306 VPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALM 365
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F N+ ++ +W +MI GL+ HG A AL ++ MLE GL P+ VTFLGVL AC+H G
Sbjct: 366 VFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGF 425
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
VD+G +LF M ++Y L+P +HY +++LLGRAG ++DA++ + +P++P+ + GAL+
Sbjct: 426 VDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLGALL 485
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C +S D + L+ L + G+ L N+Y+ + +RK M+ V
Sbjct: 486 GAC-VSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVE 544
Query: 358 KAPGCSWILVKGRVHVFSSGDR 379
K PG SWI V G +H F + D
Sbjct: 545 KTPGYSWIEVAGSMHEFKAFDH 566
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 133/264 (50%), Gaps = 14/264 (5%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
IS + +G + AC +FD P+RD +AWT++I+G+V+N + EA+ F EM G
Sbjct: 148 ISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDG 207
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS----LVSMYAKCGEIDDSYR 177
T A + A V G+++HG V+T ++L+ S LV MY KCG +D+ +
Sbjct: 208 FTVASVLRAAALVGDYCFGKRVHGFYVET---GRVVLDGSVYCALVDMYFKCGYCEDACK 264
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M YRD ++W ++ G + +AL+ + ML + P+ T VL+ACAH G
Sbjct: 265 VFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGA 324
Query: 238 VDKGWELFNSMV-NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+D+G + M N L S++++ + G V A L V+ H W A+
Sbjct: 325 LDQGRLVHRYMEHNDCNLNAVLG--TSLVDMYAKCGCVDKALMVFENLQVKNVHT-WTAM 381
Query: 297 VGVCGLS-KTDADVASRATKRLLE 319
+ GL+ DA A R+LE
Sbjct: 382 IN--GLAVHGDALGALNIFSRMLE 403
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + T ++ Y G V KA +F+++ ++ WT+MI+G + A+++F M+
Sbjct: 343 NAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRML 402
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGE 171
G P + TF + GA ++D+G++L M T Y +E+ +V + + G
Sbjct: 403 ESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHT-YHLKPNMEHYGCMVDLLGRAGC 461
Query: 172 IDDSYRIFSNMAYR 185
++D+ +I NM +
Sbjct: 462 LEDAKQIIDNMPMK 475
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 181/322 (56%), Gaps = 1/322 (0%)
Query: 58 WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 117
+ ++ Y G AC +FD MP RD +AWT +++G+VQ + +A+S F M+
Sbjct: 246 YCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNV 305
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T + A V LDQGR +H + +L SLV MYAKCG +D +
Sbjct: 306 VPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALM 365
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F N+ ++ +W +MI GL+ HG A AL ++ MLE GL P+ VTFLGVL AC+H G
Sbjct: 366 VFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGF 425
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
VD+G +LF M ++Y L+P +HY +++LLGRAG ++DA++ + +P++P+ + GAL+
Sbjct: 426 VDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLGALL 485
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C +S D + L+ L + G+ L N+Y+ + +RK M+ V
Sbjct: 486 GAC-VSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVE 544
Query: 358 KAPGCSWILVKGRVHVFSSGDR 379
K PG SWI V G +H F + D
Sbjct: 545 KTPGYSWIEVAGSMHEFKAFDH 566
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 133/264 (50%), Gaps = 14/264 (5%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
IS + +G + AC +FD P+RD +AWT++I+G+V+N + EA+ F EM G
Sbjct: 148 ISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDG 207
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS----LVSMYAKCGEIDDSYR 177
T A + A V G+++HG V+T ++L+ S LV MY KCG +D+ +
Sbjct: 208 FTVASVLRAAALVGDYCFGKRVHGFYVET---GRVVLDGSVYCALVDMYFKCGYCEDACK 264
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M YRD ++W ++ G + +AL+ + ML + P+ T VL+ACAH G
Sbjct: 265 VFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGA 324
Query: 238 VDKGWELFNSMV-NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+D+G + M N L S++++ + G V A L V+ H W A+
Sbjct: 325 LDQGRLVHRYMEHNDCNLNAVLG--TSLVDMYAKCGCVDKALMVFENLQVKNVHT-WTAM 381
Query: 297 VGVCGLS-KTDADVASRATKRLLE 319
+ GL+ DA A R+LE
Sbjct: 382 IN--GLAVHGDALGALNIFSRMLE 403
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + T ++ Y G V KA +F+++ ++ WT+MI+G + A+++F M+
Sbjct: 343 NAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRML 402
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGE 171
G P + TF + GA ++D+G++L M T Y +E+ +V + + G
Sbjct: 403 ESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHT-YHLKPNMEHYGCMVDLLGRAGC 461
Query: 172 IDDSYRIFSNMAYR 185
++D+ +I NM +
Sbjct: 462 LEDAKQIIDNMPMK 475
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 192/351 (54%), Gaps = 11/351 (3%)
Query: 43 AQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM--PDRDSIAWTSMISGYVQNE 100
A++LFD N MI Y+ G V A LFDSM D+D +WT+MISGY Q
Sbjct: 165 ARKLFDEFG-GNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAH 223
Query: 101 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 160
EAI LF M P + A + L G +H K + L N
Sbjct: 224 NPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYN 283
Query: 161 SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLY 219
SL+ MYAK G I + +F NM ++ I+W +MI GL+ HG EAL V+ M E +
Sbjct: 284 SLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVK 343
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
P+ VTF+ +L+AC+H GLV+ G + F SM + YG++P +HY +I+LLGRAG +++A+E
Sbjct: 344 PNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKE 403
Query: 280 FVLRLPVEPNHAIWGALVGV---CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYA 336
VLR+P E N AIWG+L+ CG DA++A A + L L+P + + L N YA
Sbjct: 404 MVLRMPFEANAAIWGSLLAASTRCG----DAELAEEALRHLTVLEPGHCGNYSLLSNTYA 459
Query: 337 ANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+ R E +RK M+ GV K PG S+I V V+ F +GD+L + DI
Sbjct: 460 SLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIAGDKLSIYFVDI 510
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD-- 85
NS+I+ Y ++G + KA ELF+ + + I WT MI+G G +A +F M D
Sbjct: 283 NSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRV 342
Query: 86 ---SIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ + +++S L+ F M + +G P + + +G +L + +
Sbjct: 343 KPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAK 402
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+ M ++ +E + + SL++ +CG+ +
Sbjct: 403 E---MVLRMPFEANAAIWGSLLAASTRCGDAE 431
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 186/328 (56%), Gaps = 2/328 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G++ + +FD M + D +W S+I+ Y QN L EA SLF +M+ G
Sbjct: 239 LMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRY 298
Query: 121 NG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
N T + + A L G+ +H VK E +L++ S+V MY KCG ++ + + F
Sbjct: 299 NAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAF 358
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ ++ SW M+ G HG EA+ V+ M+ G+ P+ +TF+ VL AC+HAGL+
Sbjct: 359 DRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLK 418
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+GW FN M + ++PG +HY +++LLGRAG +K+A + + V+P+ +WG+L+G
Sbjct: 419 EGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGA 478
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C + K + ++ + ++L +LDP N +V L NIYA R ++ +R M+ G+ K
Sbjct: 479 CRIHK-NVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKT 537
Query: 360 PGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PG S + KGRVHVF GD+ P E I
Sbjct: 538 PGYSIVEHKGRVHVFLVGDKEHPQHEKI 565
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A LFD +P+R+ ++WTSMISGYVQNE EA+ LF E + +
Sbjct: 127 LIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDY 186
Query: 121 NGTF-------AVLFG----AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
+ +VL G A V +HG+ VK +E L + N+L+ YAKC
Sbjct: 187 DEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKC 246
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGV 228
GEI S ++F M D SWNS+I + +G + EA +++ M++ G + + VT V
Sbjct: 247 GEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAV 306
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 288
L ACAH+G + G + + V L+ SI+++ + G+V+ A + RL
Sbjct: 307 LLACAHSGALQIG-KCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK-RK 364
Query: 289 NHAIWGALVGVCGL 302
N W +V G+
Sbjct: 365 NVKSWTVMVAGYGM 378
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 77 LFDSMPDRDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+F D+ S+ +W S+I+ + ++ +A+ F M P TF + S+
Sbjct: 41 MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L G+Q+H Y D+ + ++L+ MY+KCG ++D+ ++F + R+ +SW SMI
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMIS 160
Query: 196 GLSDHGRASEAL-----------TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
G + RA EA+ T Y+ ++ G+ D+V V++ACA + +
Sbjct: 161 GYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCV-----KS 215
Query: 245 FNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
V+ ++ GF+ +++ N L + G++ + + V E + W +L+ V
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRK-VFDGMEETDVCSWNSLIAV 273
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACD 76
++ +L++++ +G L+ + + D V N + T ++ Y G+V A
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
FD + ++ +WT M++GY + EA+ +F EM+ G P TF + A
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGL 416
Query: 137 LDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMI 194
L +G + M+ + E + + +V + + G + ++Y + M + D I W S++
Sbjct: 417 LKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476
Query: 195 MGLSDH 200
H
Sbjct: 477 GACRIH 482
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 186/328 (56%), Gaps = 2/328 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G++ + +FD M + D +W S+I+ Y QN L EA SLF +M+ G
Sbjct: 239 LMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRY 298
Query: 121 NG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
N T + + A L G+ +H VK E +L++ S+V MY KCG ++ + + F
Sbjct: 299 NAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAF 358
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ ++ SW M+ G HG EA+ V+ M+ G+ P+ +TF+ VL AC+HAGL+
Sbjct: 359 DRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLK 418
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+GW FN M + ++PG +HY +++LLGRAG +K+A + + V+P+ +WG+L+G
Sbjct: 419 EGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGA 478
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C + K + ++ + ++L +LDP N +V L NIYA R ++ +R M+ G+ K
Sbjct: 479 CRIHK-NVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKT 537
Query: 360 PGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PG S + KGRVHVF GD+ P E I
Sbjct: 538 PGYSIVEHKGRVHVFLVGDKEHPQHEKI 565
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A LFD +P+R+ ++WTSMISGYVQNE EA+ LF E + +
Sbjct: 127 LIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDY 186
Query: 121 NGTF-------AVLFG----AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
+ +VL G A V +HG+ VK +E L + N+L+ YAKC
Sbjct: 187 DEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKC 246
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGV 228
GEI S ++F M D SWNS+I + +G + EA +++ M++ G + + VT V
Sbjct: 247 GEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAV 306
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 288
L ACAH+G + G + + V L+ SI+++ + G+V+ A + RL
Sbjct: 307 LLACAHSGALQIG-KCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK-RK 364
Query: 289 NHAIWGALVGVCGL 302
N W +V G+
Sbjct: 365 NVKSWTVMVAGYGM 378
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 77 LFDSMPDRDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+F D+ S+ +W S+I+ + ++ +A+ F M P TF + S+
Sbjct: 41 MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L G+Q+H Y D+ + ++L+ MY+KCG ++D+ ++F + R+ +SW SMI
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMIS 160
Query: 196 GLSDHGRASEAL-----------TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
G + RA EA+ T Y+ ++ G+ D+V V++ACA + +
Sbjct: 161 GYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCV-----KS 215
Query: 245 FNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
V+ ++ GF+ +++ N L + G++ + + V E + W +L+ V
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRK-VFDGMEETDVCSWNSLIAV 273
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACD 76
++ +L++++ +G L+ + + D V N + T ++ Y G+V A
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
FD + ++ +WT M++GY + EA+ +F EM+ G P TF + A
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGL 416
Query: 137 LDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMI 194
L +G + M+ + E + + +V + + G + ++Y + M + D I W S++
Sbjct: 417 LKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476
Query: 195 MGLSDH 200
H
Sbjct: 477 GACRIH 482
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 195/345 (56%), Gaps = 9/345 (2%)
Query: 47 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 106
FDT N +I+ Y S G + A LFD M RD ++W+++IS V+N L AEA+
Sbjct: 108 FDT----NIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEAL 163
Query: 107 SLFGEMMAHGFSPLN----GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 162
S+F +M N + A+ S+ ++ G +H V+ + L +L
Sbjct: 164 SVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTAL 223
Query: 163 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 222
++MY++CG ID S ++F M R+ ++W ++I GL+ HGR+ EAL V+ M E GL PD
Sbjct: 224 INMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDG 283
Query: 223 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 282
F+GVL AC+H GLV+ GW +F SM + +G++P +HY +++LLGRAG + +A +FV
Sbjct: 284 ALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVE 343
Query: 283 RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHI 342
+P++PN IW L+G C ++ +A +A +R++ELDP + +V L N Y
Sbjct: 344 EMPLKPNSVIWRTLLGAC-VNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWG 402
Query: 343 ELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
LR M+ + K PG S++ + VH F SGD + P E+I
Sbjct: 403 GKAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEI 447
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 196/340 (57%), Gaps = 5/340 (1%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
M++GY + G++E A+E+F+ +P RN W+ M+ GY G V +A +F +P R+ W
Sbjct: 187 MVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIW 246
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM-QV 148
SMI+GYVQN +A+ FGEM GF P T + A + LD G+Q+H M +
Sbjct: 247 NSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIEC 306
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
K I +L + L+ MYAKCG++ ++ +F + R+ WN+MI G + +G+ +E L
Sbjct: 307 KGIAVNQFVL-SGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLE 365
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+ M E + D VTF+ VL+ACAH GL+ + E+ + M YG++ G HY +++LL
Sbjct: 366 YLDRMQESNIRLDAVTFITVLSACAHGGLMSEALEVISKM-EEYGIEMGIRHYGCMVDLL 424
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGH 328
GRAGK+K+A E + R+P++PN + GA++G C + +D +A + K + H
Sbjct: 425 GRAGKLKEAYELIKRMPMKPNETVLGAMIGACWI-HSDMKMAEQVMKMIGADSAACVNSH 483
Query: 329 -VALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
V L NIYAA+++ + +R M G K PG S I++
Sbjct: 484 NVLLSNIYAASEKWEKAEMIRSSMVDGGSEKIPGYSSIIL 523
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 10/272 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+++ Y + G + A+++FD +P RN + W MI GYL G A F+ MP + +
Sbjct: 90 TAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRV 149
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W+ MI G+ +N A F ++ P V++ M Y +G +
Sbjct: 150 SWSQMIGGFARNGDTLTARKFFDKV------PYELKDVVIWTVMVD-GYAKKGEMEDARE 202
Query: 148 V-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
V + + E + + +S+V Y K G++ ++ IF + R+ WNSMI G +G +A
Sbjct: 203 VFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKA 262
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
L + M G PD T + VL+ACA G +D G ++ + M+ G+ +I+
Sbjct: 263 LEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHH-MIECKGIAVNQFVLSGLID 321
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ + G + +A V E N W A++
Sbjct: 322 MYAKCGDLVNA-RLVFESCNERNVFCWNAMIA 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
L A S +L + LH +K + D+ + ++V+ YAKCG + D+ ++F M R+
Sbjct: 57 LLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERN 116
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
++WN+MI G +G A AL +E M V++ ++ A G + F+
Sbjct: 117 VVTWNAMIGGYLRNGDAKSALLAFEEMPG----KTRVSWSQMIGGFARNGDTLTARKFFD 172
Query: 247 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 306
+ Y L+ + +++ + G+++DA E +P E N+ +W ++ VCG K
Sbjct: 173 KV--PYELKD-VVIWTVMVDGYAKKGEMEDAREVFELMP-ERNYFVWSSM--VCGYCKKG 226
Query: 307 ADVASRATKRLLELDPL 323
+ + A R + + L
Sbjct: 227 DVMEAEAIFRRIPVRNL 243
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 222/431 (51%), Gaps = 46/431 (10%)
Query: 1 MYSVFGLMDYASNALE---GNLNNFDDQ-SLNSMINGYVQAGQLEKAQELFDTVPIRNKI 56
MYS +D A LE GN++N +D NS++N V++G+L +A E+ + + +
Sbjct: 165 MYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRM-VDEGV 223
Query: 57 AW----------------------------------------TCMISGYLSAGQVFKACD 76
W + ++ + G V A
Sbjct: 224 VWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARK 283
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD + +R+ + WTS+++ Y+QN E ++L M G TFAVL A +A
Sbjct: 284 VFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAA 343
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L G LH K + +I+ N+L++MY+KCG ID SY +F +M RD I+WN+MI G
Sbjct: 344 LRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICG 403
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
S HG +AL +++ ML G P+ VTF+GVL+ACAH LV++G+ N ++ + ++P
Sbjct: 404 YSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEP 463
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
G +HY ++ +L RAG +++AE F+ V+ + W L+ C + + + ++ ++ +
Sbjct: 464 GLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHR-NYNLGTKIAET 522
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
+L++DP + + L N+YA +T +RK MR + V+K PG SWI ++ VHVFSS
Sbjct: 523 ILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSS 582
Query: 377 GDRLEPHVEDI 387
P I
Sbjct: 583 DGSNHPECIQI 593
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 42/283 (14%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
F+ LNS+IN YV+ +L A+ LFD + +R+ +++ ++ GYL +G+
Sbjct: 53 FNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHL--------- 103
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
E + LF M++ + P F + A + +G
Sbjct: 104 ----------------------EVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGM 141
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-----YRDKISWNSMIMG 196
Q HG K + +++SLV MY+KC +D + ++ + D +NS++
Sbjct: 142 QCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNA 201
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
L + GR EA+ V M++ G+ D+VT++ V+ C + G ++ ++ GL
Sbjct: 202 LVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKG-GLT- 259
Query: 257 GFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
FD ++ ++++ G+ G V A + L N +W +L+
Sbjct: 260 -FDVFVGSMLVDMFGKCGDVLSARKVFDGLQ-NRNVVVWTSLM 300
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 153 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 212
E+++I NSL+++Y KC ++ + +F M+ R +S+N ++ G G E + +++
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 213 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
M+ P+ F VL+ACAH+G V +G + + + +GL F H++
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQC-HGFLFKFGLV--FHHFVK 159
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 209/365 (57%), Gaps = 6/365 (1%)
Query: 20 NNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 79
N+ D ++S+IN + + + A+++FD RN + WT ++SGY S G V +A D+FD
Sbjct: 116 NSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFD 175
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH--GFSPL--NGTFAV-LFGAMGSV 134
MP R+ ++++M+SGYV+N +E + LF E+ G + L NG V + A V
Sbjct: 176 KMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMV 235
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
++G+ +H + EYDL L +L+ Y KCG + + ++F+ M +D +W++MI
Sbjct: 236 GAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMI 295
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+GL+ +G AL ++E M + G P+ VTF+GVLTAC H L + LF M Y +
Sbjct: 296 LGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNI 355
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
P +HY ++++L R+G+VK A F+ + +EP+ AIWG+L+ C L ++ +
Sbjct: 356 TPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGC-LMHGHYELGQKVG 414
Query: 315 KRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVF 374
K L+E +P ++ +V L N+YA + ++ +RK M+ +GV G S+I + +H F
Sbjct: 415 KYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKF 474
Query: 375 SSGDR 379
+ D+
Sbjct: 475 FADDK 479
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 37/255 (14%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF +P+ + + S+I+ Y N + +F +M+ P + TF L A S++
Sbjct: 44 LFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSS 103
Query: 137 LDQGRQLHGMQV-------------------------KTIYE----YDLILENSLVSMYA 167
L+Q L M++ + +++ +++ SLVS Y
Sbjct: 104 LEQVFTL-SMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYC 162
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
CG ++++ +F M R++ S+++M+ G +G SE + ++ + + + F G
Sbjct: 163 SCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNG 222
Query: 228 -----VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 282
VL AC G ++G + +S V GL+ + ++I+ + G VK AE+
Sbjct: 223 ALLVSVLNACTMVGAFEEG-KWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFN 281
Query: 283 RLPVEPNHAIWGALV 297
++PV+ + A W A++
Sbjct: 282 KMPVK-DVATWSAMI 295
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 208/375 (55%), Gaps = 12/375 (3%)
Query: 14 ALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFK 73
+L + DQ ++ I G+V +E D ++ + +++ Y G +
Sbjct: 328 SLTSIFSQLSDQRISRSILGFVIR------REWLD----KDVVIGNALVNMYAKLGYMNC 377
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMG 132
A +FD +P +D+I+W ++++GY QN L +EAI + M P GT+ + A
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
V L QG ++H +K D+ + L+ +Y KCG ++D+ +F + + WN+
Sbjct: 438 HVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNA 497
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
+I L HGR EAL +++ ML + D +TF+ +L+AC+H+GLVD+G + F+ M Y
Sbjct: 498 IIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEY 557
Query: 253 GLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASR 312
G++P HY +++LLGRAG ++ A E V +P++P+ +IWGAL+ C + +A++ +
Sbjct: 558 GIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIY-GNAELGTL 616
Query: 313 ATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVH 372
A+ RLLE+D N +V L NIYA ++ + +R R +G+RK PG S ++V +
Sbjct: 617 ASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAE 676
Query: 373 VFSSGDRLEPHVEDI 387
VF +G++ P +I
Sbjct: 677 VFYTGNQTHPKYTEI 691
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 131/247 (53%), Gaps = 10/247 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G++ A +FD M RD ++W S+I+ Y QN + A+ F M G P
Sbjct: 263 LINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD 322
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY-EYDLILENSLVSMYAKCGEIDDSYRIF 179
T L ++ R + G ++ + + D+++ N+LV+MYAK G ++ ++ +F
Sbjct: 323 LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLV 238
+ +D ISWN+++ G + +G ASEA+ Y M E P+ T++ ++ A +H G +
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442
Query: 239 DKGWELFNSMV-NSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
+G ++ ++ NS L D +++ +I+L G+ G+++DA +P + + W A
Sbjct: 443 QQGMKIHAKLIKNSLYL----DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS-VPWNA 497
Query: 296 LVGVCGL 302
++ G+
Sbjct: 498 IIASLGI 504
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 24 DQSLNSMINGYVQAGQLEKAQELFDTV-PIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D N++ N V +K L +N + T +I+ Y++ G + + FD +
Sbjct: 22 DADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGR 141
++ +W S+IS YV+ EA++ ++ + G L F + + L G+
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGK 141
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
++H K +E D+ + SLV +Y++ G +D ++++F +M +D SWN+MI G +G
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A+ AL V M G+ DT+T +L CA + V G +++ + L+ G D
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING-----VLIHLHVLKHGLDSD 256
Query: 262 I----SIINLLGRAGKVKDAE 278
+ ++IN+ + G+++DA+
Sbjct: 257 VFVSNALINMYSKFGRLQDAQ 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A +F MP +D +W +MISG+ QN A A+ + M G T A +
Sbjct: 175 AHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQ 234
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ G +H +K + D+ + N+L++MY+K G + D+ +F M RD +SWNS+
Sbjct: 235 SDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSI 294
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
I + S AL ++ M G+ PD +T + + +
Sbjct: 295 IAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 186/331 (56%), Gaps = 1/331 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G + + +FD + +++S W ++ S EA+ M G
Sbjct: 693 LITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLD 752
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+F+V +G++ LD+G+QLH +K +E D + N+ + MY KCGEIDD +RI
Sbjct: 753 QFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILP 812
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
R K SWN +I L+ HG +A + ML+ GL PD VTF+ +L+AC+H GLVD+
Sbjct: 813 IPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDE 872
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G F+SM + +G+ +H + II+LLGR+G++ +AE F+ ++PV PN +W +L+ C
Sbjct: 873 GLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAAC 932
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + ++ +A RL EL+ + +V N+ A+ R ++ ++RK+M + ++K P
Sbjct: 933 KV-HGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKP 991
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
CSWI +K +V F GD+ P I ++
Sbjct: 992 ACSWIKLKNKVMTFGMGDQFHPQSAQIYAKL 1022
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 5/238 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS + + V +A +F++M +RD+I+W S+I+ N E++ F M
Sbjct: 392 LISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTD 451
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + L A GS +L GR LHG+ K+ E ++ + NSL+SMYA+ G +D+ +F
Sbjct: 452 YITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFH 511
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M RD ISWNSM+ + G+ S A+ + ML+ + VTF L+AC + +
Sbjct: 512 TMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL----E 567
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++ ++ V + + +++ + G+ G + +A++ +P E + W AL+G
Sbjct: 568 KLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIG 624
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 124/274 (45%), Gaps = 4/274 (1%)
Query: 5 FGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISG 64
+G+ + N ++ F + + + G V G+ A + D + +N +++
Sbjct: 135 YGIHTFIRNHSNPQVSRFLQKGFSEISEGNV--GKALHALCVKDVIQ-QNTFYTNTLVNM 191
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +FD M DR+ +W +MISG+V+ +A+ F M +G +P +
Sbjct: 192 YSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVI 251
Query: 125 AVLFGAMGSVAYLDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
A + A + +G RQ+HG VK ++ + SL+ Y G + ++ ++F +
Sbjct: 252 ASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE 311
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
+ +SW S+++ +D+G E L +Y + GL T V+ C G G++
Sbjct: 312 EPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQ 371
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
+ ++ S S+I++ G V++A
Sbjct: 372 ILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 32/250 (12%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y AG A +F +MP RD I+W SM++ +V++ + AI L EM+ +
Sbjct: 493 LLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMN 552
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF A+ + L++ + +H + ++LI+ N+LV+MY K G +D++ ++
Sbjct: 553 YVTFTT---ALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCK 609
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA------- 233
M RD ++WN++I G +D + + + M GL + +T + +L C
Sbjct: 610 IMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLK 669
Query: 234 -----HAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPV 286
HA +V G+EL D Y+ S+I + + G + + ++ +
Sbjct: 670 HGMPIHAHIVVAGFEL--------------DTYVQSSLITMYAQCGDL-NTSSYIFDVLA 714
Query: 287 EPNHAIWGAL 296
N + W A+
Sbjct: 715 NKNSSTWNAI 724
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 16/291 (5%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
N I +++ Y G + +A + MP+RD + W ++I G+ ++ I F M
Sbjct: 583 HNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLM 642
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYL-DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
G T L G S YL G +H V +E D +++SL++MYA+CG+
Sbjct: 643 RREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGD 702
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
++ S IF +A ++ +WN++ + +G EAL M G+ D +F L
Sbjct: 703 LNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALAT 762
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVE 287
+ ++D+G +L +S+ ++ GF D Y+ + +++ G+ G++ D +L +P
Sbjct: 763 IGNLTVLDEGQQL-----HSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFR-ILPIPKI 816
Query: 288 PNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN-APGHVALCNIYAA 337
+ W L+ L++ +AT+ E+ L P HV ++ +A
Sbjct: 817 RSKRSWNILIS--ALAR--HGFFRQATEAFHEMLDLGLKPDHVTFVSLLSA 863
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+ LH + VK + + + N+LV+MY+K G I + +F M R+ SWN+MI G
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
G +A+ + M E G+ P + ++TAC +G + +G + V GL
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
S+++ G G V +A + + EPN W +L+ VC
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM-VC 324
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 192/331 (58%), Gaps = 7/331 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSP 119
+I Y + ++ + +FD M R+ WT+MI+GYVQN A+ LF EM P
Sbjct: 278 LIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRP 337
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ + A G + L G+Q+H +K + + L N+L+ MYAKCG +D + R+F
Sbjct: 338 NRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVF 397
Query: 180 SNMAY-RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
N +Y +D I+W+S+I HG+ EALT Y ML+ G+ PD +T +GVL+AC +GLV
Sbjct: 398 DNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLV 457
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV- 297
D+G ++NS+ Y ++P + +++LLGR+G++ A +F+ +P+ P ++WG+L+
Sbjct: 458 DEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLT 517
Query: 298 -GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
V + D+A R LLEL+P N +++L N YA++ R E+T +R M+ +G+
Sbjct: 518 ASVIHGNSMTRDLAYRC---LLELEPENPSNYISLSNTYASSRRWDEITEVRSMMKERGL 574
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
RK PG SWI + + H F+ D++ P I
Sbjct: 575 RKVPGISWITISDKNHFFTVADKVHPSSSSI 605
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 136/294 (46%), Gaps = 13/294 (4%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
+N T +IS Y + G + +FDS+ ++ W S+I+GYV+N AI LF +M
Sbjct: 59 QNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM 118
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
P + T A + G + L G+ +HG ++ + D+++ NS++SMY +C E
Sbjct: 119 -GRCLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREF 177
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLS-----DHGRASEALTVYETMLEFGLYPDTVTFLG 227
D+ ++F M R+ S+N +I G + D+ ++ + M G D T
Sbjct: 178 GDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVAS 237
Query: 228 VLTACAHA-GLVDKGWELFNSMV-NSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLR 283
+L C + G D G EL +V N L+ D ++ S+I++ R+ K+ + +
Sbjct: 238 LLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQ 297
Query: 284 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+ N +W A++ G + A + R ++ P V+L ++ A
Sbjct: 298 MK-SRNIYVWTAMIN--GYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPA 348
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 200/358 (55%), Gaps = 8/358 (2%)
Query: 36 QAGQLEKAQELFDTVPIRNKIAWTCMISG-----YLSAGQVFKACDLFDSMPDRDSIAWT 90
Q+ QL + + + + IRN+I ++ Y G+V A +F MP +++W
Sbjct: 320 QSAQLLEGKFVHGYI-IRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWN 378
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
MISGYV + +A+ LFGEM P TF + A +A L++GR++H + V+
Sbjct: 379 VMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVER 438
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 210
+ ++ +L+ MYAKCG +++++ +F + RD +SW SMI HGR EAL ++
Sbjct: 439 NLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELF 498
Query: 211 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 270
ML+ + PD VTFL +L+AC+HAGLVD G FN M+N YG+ P +HY +I LLGR
Sbjct: 499 AEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGR 558
Query: 271 AGKVKDAEEFVLRLP-VEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHV 329
AG++ +A E + P + + + L C L K + D+ + L++ DP ++ ++
Sbjct: 559 AGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHK-NLDLGVEIAENLIDKDPDDSSTYI 617
Query: 330 ALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
L N+YA+ + E+ +R +M+ G++K PGCSWI + ++ F D H+E I
Sbjct: 618 ILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGI 675
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 166/390 (42%), Gaps = 45/390 (11%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFD------------ 48
+Y L DYA N + N F+ N ++ GY + ++A LFD
Sbjct: 47 LYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDS 106
Query: 49 -TVP------------IRNKIAWTCMISG---------------YLSAGQVFKACDLFDS 80
T P + ++ TC++ Y + A LFD
Sbjct: 107 YTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDE 166
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
MPD+D W ++IS Y Q+ EA+ FG M GF P + T + + LD+G
Sbjct: 167 MPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRG 226
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
R++H V + + D + +LV MY KCG+++ + +F M + ++WNSMI G
Sbjct: 227 REIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFK 286
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G + +++ M G+ P T L AC+ + + +G + + + +QP
Sbjct: 287 GDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG-KFVHGYIIRNRIQPDIFL 345
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG--VCGLSKTDA-DVASRATKRL 317
S+++L + GKV+ AE + +L + W ++ V DA + +K
Sbjct: 346 NSSLMDLYFKCGKVESAET-IFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSF 404
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSL 347
+E D + +A C+ AA ++ E+ +L
Sbjct: 405 VEPDAITFTSVLAACSQLAALEKGREIHNL 434
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 158/306 (51%), Gaps = 19/306 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFD---TVPIRNKIAWTC--MISGYLSAGQVFKACDL 77
D + L ++ V + L++ + L T+ ++N + + C +IS Y+S A ++
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDV-YVCKNLISLYVSCNLFDYAKNV 60
Query: 78 FDSMPDRDSIAWTS-MISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVA 135
FD + + I+ + +++GY +N + EA+ LF ++M + P + T+ + A G +
Sbjct: 61 FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+ G+ +H VK D+++ +SLV MYAKC E + + ++F M +D WN++I
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G+ EAL + M FG PD+VT +++CA +D+G E+ +VNS
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS---- 236
Query: 256 PGF--DHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
GF D ++S ++++ G+ G+++ A E ++P + A W +++ G K D
Sbjct: 237 -GFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVA-WNSMINGYGF-KGDGISCI 293
Query: 312 RATKRL 317
+ KR+
Sbjct: 294 QLFKRM 299
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 37/275 (13%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
++++ Y + GQLE A E+F+ +P + +AW MI+GY G D I+
Sbjct: 247 ALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKG---------------DGIS 291
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
I LF M + G P T A A L +G+ +HG +
Sbjct: 292 ----------------CIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYII 335
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
+ + D+ L +SL+ +Y KCG+++ + IF M +SWN MI G G+ +AL
Sbjct: 336 RNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALR 395
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIIN 266
++ M + + PD +TF VL AC+ ++KG E+ N +V G + + ++++
Sbjct: 396 LFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVER---NLGNNEVVMGALLD 452
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
+ + G V++A LP E + W +++ G
Sbjct: 453 MYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITAYG 486
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 200/358 (55%), Gaps = 8/358 (2%)
Query: 36 QAGQLEKAQELFDTVPIRNKIAWTCMISG-----YLSAGQVFKACDLFDSMPDRDSIAWT 90
Q+ QL + + + + IRN+I ++ Y G+V A +F MP +++W
Sbjct: 320 QSAQLLEGKFVHGYI-IRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWN 378
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
MISGYV + +A+ LFGEM P TF + A +A L++GR++H + V+
Sbjct: 379 VMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVER 438
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 210
+ ++ +L+ MYAKCG +++++ +F + RD +SW SMI HGR EAL ++
Sbjct: 439 NLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELF 498
Query: 211 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 270
ML+ + PD VTFL +L+AC+HAGLVD G FN M+N YG+ P +HY +I LLGR
Sbjct: 499 AEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGR 558
Query: 271 AGKVKDAEEFVLRLP-VEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHV 329
AG++ +A E + P + + + L C L K + D+ + L++ DP ++ ++
Sbjct: 559 AGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHK-NLDLGVEIAENLIDKDPDDSSTYI 617
Query: 330 ALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
L N+YA+ + E+ +R +M+ G++K PGCSWI + ++ F D H+E I
Sbjct: 618 ILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGI 675
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 166/390 (42%), Gaps = 45/390 (11%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFD------------ 48
+Y L DYA N + N F+ N ++ GY + ++A LFD
Sbjct: 47 LYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDS 106
Query: 49 -TVP------------IRNKIAWTCMISG---------------YLSAGQVFKACDLFDS 80
T P + ++ TC++ Y + A LFD
Sbjct: 107 YTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDE 166
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
MPD+D W ++IS Y Q+ EA+ FG M GF P + T + + LD+G
Sbjct: 167 MPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRG 226
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
R++H V + + D + +LV MY KCG+++ + +F M + ++WNSMI G
Sbjct: 227 REIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFK 286
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G + +++ M G+ P T L AC+ + + +G + + + +QP
Sbjct: 287 GDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG-KFVHGYIIRNRIQPDIFL 345
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG--VCGLSKTDA-DVASRATKRL 317
S+++L + GKV+ AE + +L + W ++ V DA + +K
Sbjct: 346 NSSLMDLYFKCGKVESAET-IFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSF 404
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSL 347
+E D + +A C+ AA ++ E+ +L
Sbjct: 405 VEPDAITFTSVLAACSQLAALEKGREIHNL 434
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 158/306 (51%), Gaps = 19/306 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFD---TVPIRNKIAWTC--MISGYLSAGQVFKACDL 77
D + L ++ V + L++ + L T+ ++N + + C +IS Y+S A ++
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDV-YVCKNLISLYVSCNLFDYAKNV 60
Query: 78 FDSMPDRDSIAWTS-MISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVA 135
FD + + I+ + +++GY +N + EA+ LF ++M + P + T+ + A G +
Sbjct: 61 FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+ G+ +H VK D+++ +SLV MYAKC E + + ++F M +D WN++I
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G+ EAL + M FG PD+VT +++CA +D+G E+ +VNS
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS---- 236
Query: 256 PGF--DHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
GF D ++S ++++ G+ G+++ A E ++P + A W +++ G K D
Sbjct: 237 -GFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVA-WNSMINGYGF-KGDGISCI 293
Query: 312 RATKRL 317
+ KR+
Sbjct: 294 QLFKRM 299
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 37/275 (13%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
++++ Y + GQLE A E+F+ +P + +AW MI+GY G D I+
Sbjct: 247 ALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKG---------------DGIS 291
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
I LF M + G P T A A L +G+ +HG +
Sbjct: 292 ----------------CIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYII 335
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
+ + D+ L +SL+ +Y KCG+++ + IF M +SWN MI G G+ +AL
Sbjct: 336 RNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALR 395
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIIN 266
++ M + + PD +TF VL AC+ ++KG E+ N +V G + + ++++
Sbjct: 396 LFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVER---NLGNNEVVMGALLD 452
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
+ + G V++A LP E + W +++ G
Sbjct: 453 MYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITAYG 486
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 185/323 (57%), Gaps = 1/323 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y +G + A LF+++ ++DS AW +MI+GYVQ L + F EM P TF
Sbjct: 99 YAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTF 158
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A +F A ++A L+ GRQ HG+ +K ++++ ++L+ MY KC I D +F
Sbjct: 159 ASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLS 218
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
R+ I+W ++I G HG+ E L + M+ P+ VTFL VL AC+H GL+D+ ++
Sbjct: 219 RNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKY 278
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
F SM+ Y + P HY ++++LLGR+GK+K+A EFVL+ P + + IWGAL+G C +
Sbjct: 279 FQSMIRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACKIH- 337
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
D D+ A+K+ E + +N +V L N YA++ ++ +R +R GV K PG S
Sbjct: 338 GDLDLLKIASKKYFEFERVNTGKYVVLANAYASSGLWDDVEEVRASLRESGVTKEPGYSR 397
Query: 365 ILVKGRVHVFSSGDRLEPHVEDI 387
I V+ V F +GD+ +++
Sbjct: 398 IEVQKEVSFFFNGDKYHRQADEV 420
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G++F A F S +++ ++ G + + +AI L + GF T++++
Sbjct: 8 GKIFSA---FRSSLAKNTQNLDKVLQGLCVSGKLEDAIRL---LYRTGFPVHPRTYSLML 61
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
+GR++H + Y + L+ L+ +YAK G ++ + +F+N+ +D
Sbjct: 62 QECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSF 121
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
+WN+MI G G L + M + L PD TF V ACA L++ G + M
Sbjct: 122 AWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVM 181
Query: 249 VN 250
+
Sbjct: 182 LK 183
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 121/303 (39%), Gaps = 50/303 (16%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG---------------QLEKAQE 45
+Y+ G ++ A L NL D + N+MI GYVQ G L Q
Sbjct: 98 LYAKSGCLETA-QFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQY 156
Query: 46 LFDTV-----------PIR-------------NKIAWTCMISGYLSAGQVFKACDLFDSM 81
F +V P R N + + +I Y + LFD
Sbjct: 157 TFASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKC 216
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
R++I WT++ISGY ++ + E + F M++ F P TF + A V +D+
Sbjct: 217 LSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAY 276
Query: 142 QLHGMQVKTIYEYDLILE----NSLVSMYAKCGEIDDSYRIFSNMAYRD-KISWNSMIMG 196
+ ++ +Y+++ ++V + + G++ ++Y Y++ + W +++
Sbjct: 277 KYFQSMIR---DYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGA 333
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS-YGLQ 255
HG + EF +T ++ + A A +GL D E+ S+ S +
Sbjct: 334 CKIHGDLDLLKIASKKYFEFER-VNTGKYVVLANAYASSGLWDDVEEVRASLRESGVTKE 392
Query: 256 PGF 258
PG+
Sbjct: 393 PGY 395
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 209/370 (56%), Gaps = 10/370 (2%)
Query: 28 NSMINGYVQAGQ-LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----- 81
N++I Y + + L A ++F + ++ ++W +IS Y +G A ++F +
Sbjct: 301 NALIGIYGKKREDLGDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNG 360
Query: 82 --PDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
P R + I+W+++ISG+ + +++ LF +M T + + +A L+
Sbjct: 361 HSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALN 420
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
GR+LH ++ + + ++++ N LV+MY KCG ++++ +F N+ RD ISWNS+I G
Sbjct: 421 LGRELHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYG 480
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
HG A+ ++ M+ GL PD +TF+ VL+AC+HAGLV G LF+ MV + ++P
Sbjct: 481 MHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTV 540
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+HY +++LLGRAG +++A + V +P+EPN +WGAL+ C + + D D+ R+L
Sbjct: 541 EHYACMVDLLGRAGLLQEAHDIVRNMPIEPNECVWGALLNSCRMYR-DTDLIEEIESRIL 599
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
L + L NIYA + + + +R + KG +K PG SWI V+ +V+ FS+G+
Sbjct: 600 ALKSEITGSFMLLSNIYADSGKREDSARVRVSAKEKGFKKIPGQSWIEVRKKVYTFSAGN 659
Query: 379 RLEPHVEDIL 388
+ ++I
Sbjct: 660 VVHLEQDEIF 669
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 136/294 (46%), Gaps = 8/294 (2%)
Query: 18 NLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDL 77
+L +F D L+ QA Q+ +L T + +I+ Y + +A +
Sbjct: 23 HLLDFFDHLLHHQCFTLQQARQIH--TQLILTTTHHSSFLSARLIATYSRFNSISEARKI 80
Query: 78 FDSMP--DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
F + P ++ W S+I V + A+ ++ +MM GF P T ++ + +
Sbjct: 81 FTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIG 140
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+ + +H ++T ++ + + N LV MY K ++D+ ++F M R +SWN+++
Sbjct: 141 SVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVS 200
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G + + A V++ M GL P+ VT+ +L++ A GL D+ ELF M G++
Sbjct: 201 GYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVM-RIKGIE 259
Query: 256 PGFDHYISIINLLGRAGKVKDAEE---FVLRLPVEPNHAIWGALVGVCGLSKTD 306
+ ++++ V+ +E FV++ E + AL+G+ G + D
Sbjct: 260 ISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKRED 313
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 200/373 (53%), Gaps = 10/373 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKI 56
MY G +DYA +G ++ D S SMI G+ G++E+A LF+ + + N
Sbjct: 160 MYGKCGSVDYACRVFDG-MSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDF 218
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEM 112
W +I+ Y G KA + M D +AW ++ISG+ QN E ++F EM
Sbjct: 219 TWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTVFREM 278
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ G P T A L A GSV + GR++HG + ++ ++ + ++L+ MY+KCG +
Sbjct: 279 LVSGICPNQVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSL 338
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
D+ +F + ++ SWN+MI G AL ++ M E GL P+ VTF +L+AC
Sbjct: 339 KDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFACILSAC 398
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
+H+G V+KG E+F M YG++ +HY I++LL R+GK+ +A EF+ +P++ +I
Sbjct: 399 SHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKIVEAYEFIKAMPIQVTESI 458
Query: 293 WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
GA + C + D+A + + ++ + + V L NIYAA E ++RK M+
Sbjct: 459 AGAFLNGCKIHGRK-DLAKKMAEEIMRMQLNGSGSFVTLSNIYAAEGDWEEAGNVRKVMK 517
Query: 353 IKGVRKAPGCSWI 365
+ V K PG SW+
Sbjct: 518 ERNVNKWPGSSWL 530
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y S + A LF ++ + A+ MI G V N A+ F M G
Sbjct: 56 LVGMYSSCTDLKSATLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGN 115
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF ++ + + +G+Q+HGM + D+++ N L+ MY KCG +D + R+F
Sbjct: 116 KFTFGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFD 175
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M+ RD SW SMI G + GR EAL ++E M G P+ T+ ++ A G K
Sbjct: 176 GMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKK 235
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 297
+ M G P + ++I+ + + ++ + V PN AL+
Sbjct: 236 AFGFMERM-QKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALL 294
Query: 298 GVCG 301
CG
Sbjct: 295 PACG 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 44/259 (16%)
Query: 137 LDQGRQLHGMQVKTIYEYDLI-LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L G+Q+H M + T +++ L + LV MY+ C ++ + +F N+ + ++N MI+
Sbjct: 30 LKPGKQIHAMLLTTGTNTNILSLSSKLVGMYSSCTDLKSATLLFHNIHKPNVFAFNWMIL 89
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD--KGWELF-------- 245
G+ +G AL + M + GL + TF V+ C GL+D KG ++
Sbjct: 90 GMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTC--VGLMDMKKGKQVHGMICEMGL 147
Query: 246 -------NSMVNSYGLQPGFDH---------------YISIINLLGRAGKVKDAEEFVLR 283
N +++ YG D+ + S+I G++++A R
Sbjct: 148 MNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFER 207
Query: 284 LPV---EPNHAIWGALVGV---CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+ + EPN W A++ G SK R K D + AL + +A
Sbjct: 208 MKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVV---AWNALISGFAQ 264
Query: 338 NDRHIELTSLRKEMRIKGV 356
N + E ++ +EM + G+
Sbjct: 265 NHQFRETFTVFREMLVSGI 283
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 185/318 (58%), Gaps = 1/318 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y+ G++ A FD+M +++ + W +MI+G+ QNE +A+ +F +M++ P
Sbjct: 543 LVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPD 602
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ GA V+ L G++LH VK+ + SL+ MYAKCG ++ S IF
Sbjct: 603 EISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFD 662
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ + +++WN +I G HG +A+ ++++M G PD+VTF+ +LTAC HAGLV +
Sbjct: 663 RVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAE 722
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G E M + +G++P +HY ++++LGRAG++ +A E V LP +P+ IW +L+ C
Sbjct: 723 GLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSC 782
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ D D+ + +LLEL P A +V + N YA + E+ +R+ M+ G++K
Sbjct: 783 R-NYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDA 841
Query: 361 GCSWILVKGRVHVFSSGD 378
GCSWI + G+V F GD
Sbjct: 842 GCSWIEIGGKVSRFLVGD 859
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 119/237 (50%), Gaps = 2/237 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++GY G + A +F M + +W ++I G+VQN +A+ L+ M G P
Sbjct: 442 FVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPD 501
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T A L A + L G+++HG ++ +E D + SLVS+Y +CG+I + F
Sbjct: 502 LFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFD 561
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
NM ++ + WN+MI G S + +AL ++ ML ++PD ++ +G L AC+ +
Sbjct: 562 NMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRL 621
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G EL V S+ + F S+I++ + G ++ ++ R+ ++ W L+
Sbjct: 622 GKELHCFAVKSHLTEHSFV-TCSLIDMYAKCGCMEQSQNIFDRVHLK-GEVTWNVLI 676
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 166/359 (46%), Gaps = 20/359 (5%)
Query: 6 GLMDYASNALEGNLNNFDDQS----------LNSMINGYVQAGQLEKAQELFDTVP-IRN 54
G ++ A N L+ NLN+ S L + Y K T P +N
Sbjct: 68 GNLNQAFNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQN 127
Query: 55 KIAW-TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
+ T +++ Y + +C +F++ ++ W +++SGY++N L +A+ +F EM+
Sbjct: 128 DVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI 187
Query: 114 A-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ F P N T + A V + G +HG +KT D+ + N+L++MY K G +
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFV 247
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLT 230
+ + ++F M R+ +SWNS++ ++G E+ +++ +L + GL PD T + V+
Sbjct: 248 ESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIP 307
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
CA G V G +F+ + GL S++++ + G + +A VL E N
Sbjct: 308 LCARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEAR--VLFDTNEKNV 364
Query: 291 AIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRK 349
W +++G G SK + R ++++ V L N+ + I+ L++
Sbjct: 365 ISWNSMIG--GYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKE 421
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR---- 84
S+I+ Y + G +E++Q +FD V ++ ++ W +I+GY G KA +LF SM +
Sbjct: 643 SLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRP 702
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
DS+ + ++++ L+AE + G+M + G P +A + +G L++ +L
Sbjct: 703 DSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALEL 762
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 209/367 (56%), Gaps = 13/367 (3%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
+ L I+GYV G L + I+N I ++ Y V A +F+S+ +
Sbjct: 469 EKLIKEIHGYVLKGGLAD-------ILIQNAI-----VNVYGELALVDYARHVFESINSK 516
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D ++WTSMI+ V N L EA+ LF ++ P T + A +++ L +G+++H
Sbjct: 517 DIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIH 576
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G ++ + + ++ NSLV MYA+CG ++++ IF+ + RD I W SMI HG
Sbjct: 577 GFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGK 636
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
+A+ ++ M + + PD +TFL +L AC+H+GLV +G + F M N Y L+P +HY +
Sbjct: 637 DAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACL 696
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LL R+ +++A FV +P+EP+ +W AL+G C + ++ D+ A K+LL+L+ N
Sbjct: 697 VDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRI-HSNNDLGEVAAKKLLQLNTEN 755
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
+ +V + N +AA+ R ++ +R M+ ++K PGCSWI V+ ++H F + D+ P
Sbjct: 756 SGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQC 815
Query: 385 EDILLQI 391
+I L++
Sbjct: 816 NNIYLKL 822
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 42 KAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNEL 101
K Q D+V + K + Y G + A +FD M +R W +MI V
Sbjct: 74 KTQNYLDSVFLDTKF-----VHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGR 128
Query: 102 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 161
EAI L+ EM G S TF + A G+ G ++HG+ VK Y + + N+
Sbjct: 129 YVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNA 188
Query: 162 LVSMYAKCGEIDDSYRIFSN--MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
L++MYAKCG++ + +F + M D +SWNS+I G + EAL+++ M E G+
Sbjct: 189 LIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVE 248
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDA 277
+T TF+ L AC + G + ++ S D Y+S +I + G+++DA
Sbjct: 249 SNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFT---DVYVSNALIAMYANCGQMEDA 305
Query: 278 EEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL-DPLNAPGHVALCNIYA 336
E V + + + W L+ G+ + D+ S A ++ D P V++ N+ A
Sbjct: 306 ER-VFKSMLFKDCVSWNTLLS--GMVQN--DMYSDAINHFQDMQDSGQKPDQVSVLNMIA 360
Query: 337 ANDRHIEL 344
A+ R L
Sbjct: 361 ASGRSANL 368
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 119/221 (53%), Gaps = 11/221 (4%)
Query: 61 MISGYLSAGQVFKACDLFDS--MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+I+ Y G + A LFDS M D ++W S+IS +V EA+SLF M G
Sbjct: 189 LIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVE 248
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
TF A ++ GR +H + +K+ + D+ + N+L++MYA CG+++D+ R+
Sbjct: 249 SNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERV 308
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +M ++D +SWN+++ G+ + S+A+ ++ M + G PD V+ L ++ A + +
Sbjct: 309 FKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANL 368
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVK 275
G E V++Y ++ G D + S+I++ G+ VK
Sbjct: 369 LAGME-----VHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD-LILENSLVSMYAKCGEIDDSYR 177
PL ++ S L QG+QLH +KT D + L+ V MY KCG D+ +
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+F M+ R +WN+MI GR EA+ +Y+ M G+ D TF VL AC
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC 158
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 192/338 (56%), Gaps = 7/338 (2%)
Query: 50 VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF 109
+P+ N I + Y +A LF M +D+I W ++I+G+ + E++ +F
Sbjct: 245 LPVMNAI-----LDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSY-ESLCIF 298
Query: 110 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
+M++ GFSP TF + A ++A L G+QLHG + + +L L N+L+ MYAKC
Sbjct: 299 SQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKC 358
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
G + DS++IFS M + + +SW SM++G HG EA+ ++ M+ G+ PD + F+ VL
Sbjct: 359 GNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVL 418
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 289
+AC+HAGLVD+G F M + Y + P D Y +++LL RAG+VK+A E + +P +P+
Sbjct: 419 SACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPD 478
Query: 290 HAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRK 349
+IW AL+G C K + + A ++LE+ P A +V L N AA + SLRK
Sbjct: 479 ESIWVALLGACKKYKQPS-IQKLAALKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRK 537
Query: 350 EMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
MR +K G SWI +K +V F GD + +++
Sbjct: 538 LMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEV 575
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 8/244 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G +A LFD MP RD IAWTSMI+GY + A ++F M+ G
Sbjct: 45 TDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVK 104
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-YDLILENSLVSMYAKCGE-IDDSY 176
P T + + A S+ L G+ +HG+ +K + + ++N+L+ MYA C + +D++
Sbjct: 105 PNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNAR 164
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAH 234
+F ++ ++ +SW ++I G + A L V+ M E L P +F ++ACA
Sbjct: 165 LVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSP--FSFSIAVSACAS 222
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
G + G ++ +++N +G + +I+++ R +A++ + + + W
Sbjct: 223 IGSSNLGKQVHAAVIN-HGFESNLPVMNAILDMYCRCRCASEAKQLFGEM-TQKDTITWN 280
Query: 295 ALVG 298
L+
Sbjct: 281 TLIA 284
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 111/205 (54%), Gaps = 6/205 (2%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHG-FSPLNGTFAVLFGAMGSV 134
+F+ + +++++WT++I+GY + +F +M M G SP +F++ A S+
Sbjct: 166 VFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPF--SFSIAVSACASI 223
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
+ G+Q+H + +E +L + N+++ MY +C ++ ++F M +D I+WN++I
Sbjct: 224 GSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLI 283
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G + + E+L ++ M+ G P+ TF V+ ACA+ ++ G +L +++ GL
Sbjct: 284 AGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR-GL 341
Query: 255 QPGFDHYISIINLLGRAGKVKDAEE 279
+ ++I++ + G V D+ +
Sbjct: 342 DNNLELSNALIDMYAKCGNVADSHK 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 158 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 217
L L+ Y G ++++ +F M +RD I+W SMI G + S A V+ ML G
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 218 LYPDTVTFLGVLTAC 232
+ P+ T VL AC
Sbjct: 103 VKPNAFTVSAVLKAC 117
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 191/337 (56%), Gaps = 6/337 (1%)
Query: 46 LFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
L D + + N I I+ Y G + +A +FD M +D I+W+++IS Y Q EA
Sbjct: 384 LVDALSVSNSI-----ITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEA 438
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ M G P A + GS+A L+ G+Q+H + +++ ++ ++L+SM
Sbjct: 439 FNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISM 498
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
Y++ G + ++ +IF ++ D +SW +MI G ++HG + EA++++E + GL PD VTF
Sbjct: 499 YSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTF 558
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+G+LTAC HAGLVD G+ + M N Y + P +HY II+LL RAG++ +AE V +P
Sbjct: 559 IGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMP 618
Query: 286 VEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELT 345
+ +W L+ C D D A A +++L L P +A H+ L NIY+A+ R E
Sbjct: 619 FPCDDVVWSTLLRAC-RDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAA 677
Query: 346 SLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
+RK M+ KGV K PG SWI +++ F +G + P
Sbjct: 678 HVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHP 714
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y+ G+ + C +F++M R+ ++WT++I G V + +S F EM
Sbjct: 190 SALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVG 249
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ TFAV A L G+ +H +K + + N+L +MY+KC + D R+
Sbjct: 250 YDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRL 309
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M+ D +SW ++IM G AL ++ M + + P+ TF V++ACA+ +
Sbjct: 310 FGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAIT 369
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
G ++ + GL SII L + G +++A
Sbjct: 370 KWGEQIHGHALR-LGLVDALSVSNSIITLYSKCGLLQEA 407
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 14/259 (5%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVL 127
G++ +A D+F+ M RD I+WT++I+GYV EA+ LF M + G +V
Sbjct: 98 GKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVA 157
Query: 128 FGA--MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
A +G Y G LHG VK+ + + ++LV MY K G+ + +F NM R
Sbjct: 158 LKACALGMNVYF--GELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTR 215
Query: 186 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 245
+ +SW ++I+GL G + + L+ + M + D+ TF L A A +GL+ G
Sbjct: 216 NVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYG---- 271
Query: 246 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL---PVEPNHAIWGALVGVCGL 302
+++ ++ GF+ ++N LG ++V+RL P+ W L+ + +
Sbjct: 272 -KAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLI-MTYV 329
Query: 303 SKTDADVASRATKRLLELD 321
D + A A KR+ + D
Sbjct: 330 QMGDEERALDAFKRMRKSD 348
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF M D ++WT++I YVQ A+ F M SP TFA + A ++A
Sbjct: 309 LFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAI 368
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
G Q+HG ++ L + NS++++Y+KCG + ++ +F M +D ISW+++I
Sbjct: 369 TKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISV 428
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
A EA M G P+ VL+ C L++ G V++Y L
Sbjct: 429 YCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPG-----KQVHAYALCI 483
Query: 257 GFDH----YISIINLLGRAGKVKDAEEF 280
G DH + ++I++ R+G +++A +
Sbjct: 484 GLDHETMVHSALISMYSRSGNLQEASKI 511
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 205/357 (57%), Gaps = 7/357 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+++++ Y + + +A+ +FD +P R+ ++W +++ Y + K LF M RD +
Sbjct: 218 SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKM-SRDGV 276
Query: 88 -----AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
W ++I G ++N EA+ +F +M GF P T + + A L G++
Sbjct: 277 RADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKE 336
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H + DL +L+ MYAKCG+++ S +F M +D ++WN+MI+ + HG
Sbjct: 337 IHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN 396
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EAL +++ ML + P++VTF GVL+ C+H+ LV++G ++FNSM + ++P +HY
Sbjct: 397 GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYS 456
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
++++ RAG++ +A +F+ +P+EP + WGAL+ C + K + ++A + K+L E++P
Sbjct: 457 CVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYK-NVELAKISAKKLFEIEP 515
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
N +V+L NI E + +R M+ +G+ K PGCSW+ V +VH F GD+
Sbjct: 516 NNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDK 572
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 1/196 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y V A +FD + RD ++WTS+ S YV+ + + +F EM G P
Sbjct: 119 LIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPN 178
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + + A + L G+++HG V+ +L + ++LVS+YAKC + ++ +F
Sbjct: 179 PMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFD 238
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +RD +SWN ++ + + +++ M G+ D T+ V+ C G ++
Sbjct: 239 LMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEE 298
Query: 241 GWELFNSMVNSYGLQP 256
E+F M G +P
Sbjct: 299 AVEMFRKM-QKMGFKP 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 1/218 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I L+ G +A LFD++P D +++IS + L EAI ++ + G P
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F A + +++H + D+ + N+L+ Y KC ++ + R+F
Sbjct: 78 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
++ RD +SW S+ G + + V+ M G+ P+ +T +L ACA +
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
G E+ V +G+ ++++L + V++A
Sbjct: 198 GKEIHGFAVR-HGMVVNLFVCSALVSLYAKCLSVREAR 234
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 225/430 (52%), Gaps = 44/430 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNN-FDDQSLNSMINGYVQAGQLEKAQELF------DTVP-- 51
MYS G++ A + N + N+MI GY QAG +A E+F D P
Sbjct: 314 MYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDL 373
Query: 52 -----IRNKIA-WTCMISGYLSAGQVFKA-------------------CD-------LFD 79
+ N IA C+ S + G K C+ +F
Sbjct: 374 YTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVLNALADAYVKCESLEAGEKVFY 433
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
M +D ++WT+M++ Y Q +A+++F +M GF+P + TF+ + A G + L+
Sbjct: 434 KMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEY 493
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+Q+HG+ K + + +E++L+ MY+KCG + ++ IF ++ D ++W ++I +
Sbjct: 494 GQQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAIISTYAQ 553
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
HG +AL ++ M + + + VT L +L AC+H G+V+ G E+FN M +YG+ P +
Sbjct: 554 HGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPEME 613
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL- 318
HY +++LLGR G++ +A F+ ++P+EP+ +W L+G C + +A++ A +++L
Sbjct: 614 HYACVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLGACRI-HGNAELGETAAQKILS 672
Query: 319 -ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
+ +P ++ +V L N Y + + LR M+ +G+RK PG SWI V+G VH F +
Sbjct: 673 TQPEPEHSSTYVLLSNTYIESGLLEDGIGLRDVMKERGIRKEPGYSWISVRGEVHKFYAR 732
Query: 378 DRLEPHVEDI 387
D+ P + I
Sbjct: 733 DQQHPQKDKI 742
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 5/247 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI--AWTSMISGYVQNELIAEAISLFGE 111
N T +I+ Y G + A LFDS + W +MI+GY Q EA+ +F
Sbjct: 304 NTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTR 363
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-YDLILENSLVSMYAKCG 170
M + P TF +F ++ + L ++ HG+ +K ++ ++ + N+L Y KC
Sbjct: 364 MCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVLNALADAYVKCE 423
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
++ ++F M +D +SW +M+ +AL ++ M G P+ TF V+T
Sbjct: 424 SLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVIT 483
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
AC L++ G ++ + ++ L ++I++ + G + +A+ R+ P+
Sbjct: 484 ACGGLCLLEYGQQI-HGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERIS-NPDT 541
Query: 291 AIWGALV 297
W A++
Sbjct: 542 VTWTAII 548
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
+ + + T +++ Y G + ++F++M D + ++W +MISG+ N L +A
Sbjct: 201 LMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLIN 260
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M+ +G SP TF + A+G + +++ ++H + + + + +L++MY+KCG
Sbjct: 261 MIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGV 320
Query: 172 IDDSYRIFSNMAYRDKIS--WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
+ D+ +F + ++ WN+MI G S G EAL ++ M + + PD TF V
Sbjct: 321 LCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVF 380
Query: 230 TACAHAGLVDKGWELFNSMVNSYG--LQPGFDHY-ISIINLLGRA 271
+ A G + S+ ++G L+ GFD IS++N L A
Sbjct: 381 NSIA-------GLKCLKSLKEAHGVALKCGFDAMEISVLNALADA 418
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD M +R+ +WT MI ++ A+ LF M+ G F+ + + +
Sbjct: 125 VFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDS 184
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ G +H V + ++ SL+++YAK G + S +F+NM + +SWN+MI G
Sbjct: 185 VVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISG 244
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ +G +A M+E G+ P+ TFL + A G +++ E V+ Y +
Sbjct: 245 FTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHE-----VHRYAYEW 299
Query: 257 GFDHYISI----INLLGRAGKVKDA 277
G D S+ IN+ + G + DA
Sbjct: 300 GLDSNTSVGTALINMYSKCGVLCDA 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 137 LDQGRQLHGMQVKTIY--EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
L Q +HG +K+ + +L+ N +V Y+KC + D + ++F M+ R+ SW MI
Sbjct: 82 LKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMI 141
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+ ++HG AL ++ MLE GL D F VL +C V +F MV++ +
Sbjct: 142 VASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDSV-----VFGEMVHAQVV 196
Query: 255 QPGFDHY----ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
GF + S++NL + G + + V + N W A++
Sbjct: 197 VRGFLMHAVVGTSLLNLYAKLGMCECSVN-VFNNMTDVNDVSWNAMI 242
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 204/372 (54%), Gaps = 9/372 (2%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIA-----WTCMISGYLSAGQVFKACDLFDS 80
SL S++ Y LE+ + L + I+ + + + Y G+V A FD
Sbjct: 248 SLVSVMRAYTDVDDLEQGRSLHGCI-IKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDK 306
Query: 81 MPDRDSIA-WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
M + + W +MISGY +N EA+ LF M++ P + T A V L
Sbjct: 307 MKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKL 366
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
+ + K+ Y D+ + +L+ MYAKCG ++ + +F + +D + W++MIMG
Sbjct: 367 AQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGL 426
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
HG+ EA+ +Y M + G+ P+ VTF+G+LTAC+H+GL+ +GWELF+ M +G++P +
Sbjct: 427 HGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQGWELFHCM-RDFGIKPRNE 485
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
HY +++LLGRAG +K A F+L++P+EP ++WGAL+ C + + + A ++L
Sbjct: 486 HYSCVVDLLGRAGYLKQAYVFILKMPIEPGVSVWGALLSACKIHRC-VTLGEYAAQKLFS 544
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
LDP N +V L N+YA++ + +R M+ KG+ K G S I + ++H F +GD
Sbjct: 545 LDPYNTGHYVQLSNLYASSRMWDRVAYIRVLMKEKGLTKYLGYSVIDINEKLHTFHAGDM 604
Query: 380 LEPHVEDILLQI 391
P ++I ++
Sbjct: 605 SHPQAKEIFYEL 616
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N+ T +++ + GQ+F A LFD PD D W ++I Y +N + I ++ M
Sbjct: 78 NRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMK 137
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P TF + A + +H + + + ++N LV++YAKCG I
Sbjct: 138 WVGLHPDKFTFPCVLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIG 197
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ +F + R +SW +++ G +G EAL +++ M + + PD ++ + V+ A
Sbjct: 198 MARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYT 257
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+++G L ++ GL+ D IS+ + G+V A+ F ++ +W
Sbjct: 258 DVDDLEQGRSLHGCIIKM-GLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMW 316
Query: 294 GALVG 298
A++
Sbjct: 317 NAMIS 321
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 40/279 (14%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD-S 86
N ++ Y + G++ A+ +FD + R ++WT ++SGY G+ ++A +FD M D
Sbjct: 184 NGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVK 243
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
W S++S + A V L+QGR LHG
Sbjct: 244 PDWISLVS--------------------------------VMRAYTDVDDLEQGRSLHGC 271
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI-SWNSMIMGLSDHGRASE 205
+K E + L SL + YAKCGE+ + F M +K+ WN+MI G + +G A E
Sbjct: 272 IIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEE 331
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--S 263
A+ +++ M+ + PD++T + ACA G + + + + S + G D ++ +
Sbjct: 332 AVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKS---KYGGDIFVNTT 388
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+I++ + G V+ A R V+ + +W A++ GL
Sbjct: 389 LIDMYAKCGSVESARLVFDRASVK-DVVMWSAMIMGYGL 426
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+H V + +++ L LV+ + G+I + ++F D WN++I S +
Sbjct: 65 QVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNN 124
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+ +Y M GL+PD TF VL AC+ L+D G + +V+++ + GF +
Sbjct: 125 MYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSE--LLDFG---LSCLVHAHVIVYGFGSH 179
Query: 262 ISIIN----LLGRAGKVKDAEEFVLRL 284
+ + N L + G++ A RL
Sbjct: 180 VFVQNGLVALYAKCGRIGMARMVFDRL 206
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 194/336 (57%), Gaps = 3/336 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N +++ Y + + A +FD MP R +AW +MISGY N L EA++LF +M
Sbjct: 150 NSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMN 209
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P + TF + A + L+ G ++ V ++IL SL++M+++CG++
Sbjct: 210 EMGVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVR 269
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV-YETMLEFGLYPDTVTFLGVLTAC 232
+ +F +++ + I+W +MI G HG EA+ + YE E GL P+TVTF+ VL+AC
Sbjct: 270 RARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSAC 329
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL-PVEPNHA 291
AHAGL+ +G ++F SM YGL PG +H++ ++++LG+AG + +A +F+ L PVE A
Sbjct: 330 AHAGLIHEGRQVFASMREEYGLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPA 389
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
+W A++G C + K + D+ A + L+ L+P N +V L N+YA R + S+R M
Sbjct: 390 VWTAMLGACKMHK-NYDLGVEAAQHLISLEPENPSNYVLLSNMYALAGRMDRVESVRNVM 448
Query: 352 RIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+G++K G S I V + ++F GD+ P +I
Sbjct: 449 IQRGIKKQAGYSSIDVNNKTYLFRMGDKAHPETNEI 484
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 121/236 (51%), Gaps = 2/236 (0%)
Query: 67 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 126
+AG + LF S+ D DS + S+I Q+ + I + M++ P + TF
Sbjct: 62 AAGSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTS 121
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
+F A ++ L G LH + + + ++ ++V+ YAK + + ++F M R
Sbjct: 122 VFKACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRS 181
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
++WN+MI G +G A+EA+T++ M E G+ PD+ TF+ V +AC+ G ++ G +++
Sbjct: 182 VVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYD 241
Query: 247 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
S+V S G++ S+IN+ R G V+ A V E N W A++ G+
Sbjct: 242 SIV-SNGIRVNVILGTSLINMFSRCGDVRRARA-VFDSISEGNVIAWTAMISGYGM 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 84
S+IN + + G + +A+ +FD++ N IAWT MISGY G +A +LF M
Sbjct: 256 TSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGL 315
Query: 85 --DSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+++ + +++S LI E +F M +G P + +G L +
Sbjct: 316 VPNTVTFVAVLSACAHAGLIHEGRQVFASMREEYGLVPGLEHHVCMVDMLGKAGLLTEAY 375
Query: 142 QL 143
Q
Sbjct: 376 QF 377
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 206/373 (55%), Gaps = 9/373 (2%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
FD NS++ Y G + A+ +FD +P N ++W+ MISGY G V A FD
Sbjct: 140 FDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEA 199
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P++D W +MISGYVQN E++ LF M P F + A + L+ G
Sbjct: 200 PEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGV 259
Query: 142 QLHGM--QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
+H Q+K + + L SL+ MYAKCG ++ + R+F +M RD + WN+MI G++
Sbjct: 260 WIHQHLNQLKLV-PLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAM 318
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
HG AL ++ M + G+ PD +TF+ V TAC+++G+ +G L + M + Y + P +
Sbjct: 319 HGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSE 378
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHA----IWGALVGVCGLSKTDADVASRATK 315
HY +++LL RAG ++A + ++ N + W A + C + + +A A +
Sbjct: 379 HYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSAC-CNHGETQLAELAAE 437
Query: 316 RLLELD-PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVF 374
++L+LD +++ +V L N+YAA+ +H + +R M+IKG KAPGCS + + G + F
Sbjct: 438 KVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDGVISEF 497
Query: 375 SSGDRLEPHVEDI 387
+G++ P +E+I
Sbjct: 498 IAGEKTHPQMEEI 510
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 35/240 (14%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
AC +F+ + + + ++I ++ N A+ +F +M+ P N T + A G+
Sbjct: 60 ACRVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGT 119
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
G+ +HG K +D+ + NSL++MY G++ + +F + + +SW+ M
Sbjct: 120 FHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVM 179
Query: 194 IMGLSDHGRA-------------------------------SEALTVYETMLEFGLYPDT 222
I G + G E+L ++ M + PD
Sbjct: 180 ISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDE 239
Query: 223 VTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQP-GFDHYISIINLLGRAGKVKDAEEF 280
F+ +L+ACAH G ++ G W + +N L P S++++ + G ++ A+
Sbjct: 240 SIFVSILSACAHLGALEIGVW--IHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRL 297
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 193/335 (57%), Gaps = 7/335 (2%)
Query: 59 TCMISGYLSAGQVFKAC-DLF-DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
T ++ Y G C LF D+ + D ++WT++IS + + + +A LF ++
Sbjct: 338 TALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERD-PEQAFLLFCQLHREN 396
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
F TF++ A ++H +K + D ++ N+L+ Y + G + S
Sbjct: 397 FVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSE 456
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
++F+ M D +SWNSM+ + HGRA +AL +++ M ++PD+ TF+ +L AC+HAG
Sbjct: 457 QVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAG 513
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
LV++G ++FNSM S+G+ P DHY +++L GRAGK+ +AEE + ++P++P+ IW +L
Sbjct: 514 LVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSL 573
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C +AD+A A + LDP N+ ++ + NIY++ IE +RKEMR V
Sbjct: 574 LGSCR-KHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKV 632
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
RK PG SW+ V +VH F+SG + P + IL ++
Sbjct: 633 RKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRL 667
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 26/288 (9%)
Query: 34 YVQAGQLEKAQELFDTVPIRNKIAWTC-MISGYLSAGQVFKACDLFDSMPDRDSIAWTSM 92
Y++ G L I+N I T +++ Y G + A LFD MP R+ ++WT +
Sbjct: 93 YIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVL 152
Query: 93 ISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM--GSVAYLDQGRQLHGMQVKT 150
+SGY Q LI E +LF M+A F P FA + A V Y G Q+H +K
Sbjct: 153 VSGYAQFGLIRECFALFSGMLA-CFRPNEFAFASVLCACEEQDVKY---GLQVHAAALKM 208
Query: 151 IYEYDLILENSLVSMYAKCG---------EIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
++ + + N+L++MY+KC DD++ +F +M YR+ ISWNSMI G G
Sbjct: 209 SLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRG 268
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL-----QP 256
+A+ ++ M G+ ++ T LGVL++ H + + N + L +
Sbjct: 269 LGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKS 328
Query: 257 GFDHYISIINLLGRA-----GKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G + ++ L ++ G + D + L E + W A++ V
Sbjct: 329 GLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISV 376
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 124 FAVLFGAMGSVAYLDQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
+A LF A Y+ QG LH + + D+ L N+L++MY KCG +D + +F
Sbjct: 81 YAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQ 140
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
M R+ +SW ++ G + G E ++ ML P+ F VL AC
Sbjct: 141 MPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLA-CFRPNEFAFASVLCAC 190
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP-DRDS 86
N++I+ Y ++G L ++++F + + ++W M+ Y G+ A DLF M DS
Sbjct: 440 NALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMDVHPDS 499
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+ ++++ L+ E +F M +HG +P +LD
Sbjct: 500 ATFVALLAACSHAGLVEEGTQIFNSMTESHGIAP----------------HLDH------ 537
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRAS 204
+ +V +Y + G+I ++ + M + D + W+S++ HG A
Sbjct: 538 -------------YSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEAD 584
Query: 205 EA 206
A
Sbjct: 585 LA 586
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 210/422 (49%), Gaps = 47/422 (11%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
YS FG ++ A + + + S N MI Y++ G +E A+ LFD + RN W M
Sbjct: 123 YSKFGELNNAVKLFD-RMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAM 181
Query: 62 ISGYL------------------------SAGQVFKAC---------------------D 76
++G + S G V + C
Sbjct: 182 VTGLVKFGLNEEALLFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGDRFTLMLRNVGER 241
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+ MP+ + +AW ++++G QN + + M G+ P TF + + +A
Sbjct: 242 IIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELAT 301
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L QG+Q+H +K + + +SLVSMY+KCG + DS + F RD + W+SMI
Sbjct: 302 LCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAA 361
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
HG+ +A+ ++ + + + VTFL +L AC+H+GL DKG + F+ MV YGL+
Sbjct: 362 YGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKA 421
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
+HY +++LLGR+G +++AE + +PV + IW L+ C + K + ++A R +
Sbjct: 422 RLEHYTCVVDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNE-EMARRVAEE 480
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
+L +DP + +V + I+A+ R ++ +R+ M+ K V+K PG SW+ VK +VH F
Sbjct: 481 VLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQVHQFHM 540
Query: 377 GD 378
GD
Sbjct: 541 GD 542
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 27/275 (9%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N ++N Y + G+L A +LFD +P RN ++ MI YL G + A +LFD M +R+
Sbjct: 117 NHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVA 176
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W +M++G V+ L EA+ LF M GF P +F + + L G +
Sbjct: 177 TWNAMVTGLVKFGLNEEAL-LFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGDR----- 230
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ L+L N GE RI M + ++WN+++ G + + L
Sbjct: 231 ------FTLMLRN--------VGE-----RIIKWMPNCNLVAWNTLMAGKAQNRCFDGVL 271
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
Y M G PD +TF+ V+++C+ + +G ++ ++ + G S++++
Sbjct: 272 DHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKA-GASSVVTVISSLVSM 330
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+ G ++D+ + L E + +W +++ G
Sbjct: 331 YSKCGSLQDSIKAFLECE-ERDVVLWSSMIAAYGF 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 33/161 (20%)
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
F++L + + G+QLH + + Y D + N L++ Y+K GE++++ ++F M
Sbjct: 81 FSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 140
Query: 184 YRDKIS-------------------------------WNSMIMGLSDHGRASEALTVYET 212
R+ +S WN+M+ GL G EAL ++
Sbjct: 141 RRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEAL-LFSR 199
Query: 213 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
M G PD +F VL CAH + G + F M+ + G
Sbjct: 200 MNVLGFVPDEYSFGSVLRGCAHLRALSVG-DRFTLMLRNVG 239
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 185/331 (55%), Gaps = 31/331 (9%)
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
+WTCMI GY G V A LFD MP ++ + W++MI+GY++N +A+ +F ++ G
Sbjct: 51 SWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEG 110
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
N AV A + L G + + ++ + ++IL ++V MYA+CG ++ +
Sbjct: 111 LVA-NEVGAV--SACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAV 167
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
R+F M +D ISW S+I G++ HG A EAL + M++ G+ P +TF VL A +H G
Sbjct: 168 RVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGG 227
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
LV+KG E+F SM Y L+P +HY +++LLGRAGK+++AE F+L +P++PN
Sbjct: 228 LVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEMPIKPNAP----- 282
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+ P ++ + L NIYA ++ + T +R+ M+ KGV
Sbjct: 283 -----------------------MKPEHSGYYALLSNIYARTNKWKDATVMRRLMKEKGV 319
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
RK PG S I + G+ H F+ G++ P ++ I
Sbjct: 320 RKQPGYSLIEIDGKTHEFTIGNKRHPEIDKI 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 35/169 (20%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYA-------------------------------K 168
G Q+HG VK + D ++ SLV MY K
Sbjct: 2 GMQVHGQVVKYGFGSDFHVQRSLVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYFK 61
Query: 169 CGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
CG++D + ++F M ++ ++W++MI G + +A+ ++E +++ GL + V G
Sbjct: 62 CGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLVANEV---GA 118
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
++ACAH G + G + + + L +I+++ R G V+ A
Sbjct: 119 VSACAHLGALAAGEKAYEHAIR-INLDLNVILGTAIVDMYARCGNVEKA 166
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 209/407 (51%), Gaps = 48/407 (11%)
Query: 28 NSMINGYVQAGQLEKAQELFD------TVPIRNKIAWTCMI------------------- 62
NSM+NGY Q G E+A +F VP R + I
Sbjct: 203 NSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTK 262
Query: 63 SGYLSAGQVFKA---------C-----DLFDSMPDRDSIAWTSMISGYVQNELIAEAISL 108
GY S+ V A C ++F+ M ++D +W S+IS + + + L
Sbjct: 263 MGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKL 322
Query: 109 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG-MQVKTIYEY-------DLILEN 160
F M+ + P T + A +A L GR++HG M V + + D++L N
Sbjct: 323 FDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNN 382
Query: 161 SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
+L+ MYAKCG + D+ +F NM +D SWN MI G HG EAL + M + L P
Sbjct: 383 ALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVP 442
Query: 221 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
+ ++F+G+L+AC+HAG+V +G E M + YG+ P +HY +I++L RAGK+ +A +
Sbjct: 443 NEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCRAGKLVEAYDL 502
Query: 281 VLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 340
+L +P + + W AL+ C + K D D+A A +++EL+P + +V + N+Y R
Sbjct: 503 MLTMPFKADPVGWRALLAACRIYK-DTDLAEIAASKVIELEPGHCGNYVLMSNVYGVVGR 561
Query: 341 HIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+ +++ LR MR + V+K PGCSWI + VHVF +GDR P + I
Sbjct: 562 YEQVSELRHTMRQQNVKKRPGCSWIELMNGVHVFLTGDRTHPQTDFI 608
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 165/389 (42%), Gaps = 62/389 (15%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSL---NSMINGYVQAGQLEKAQELFDT-----VPI 52
MYS L++YA N D+++ N++I G+V G + + L+ V I
Sbjct: 73 MYSKCTLINYALKVF--NYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVI 130
Query: 53 RNKIAWTCMISGYLSAGQVFK-----------------------------------ACDL 77
+K + C+I AG VF+ A ++
Sbjct: 131 PDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEV 190
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
F+ +P RD + W SM++GY Q EA+ +F M+ +G P T + +
Sbjct: 191 FEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDF 250
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
D G+ +HG K Y +++ N+L+ MY KC D+ +F M +D SWNS+I
Sbjct: 251 DNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSII--- 307
Query: 198 SDHGRASE---ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV----N 250
S H R + L +++ ML + PD VT VL AC H + G E+ M+
Sbjct: 308 SVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLG 367
Query: 251 SYGLQPGFDHYI---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSK 304
G FD + +++++ + G ++DA V E + A W ++ G+ G
Sbjct: 368 KEGRNNDFDDVLLNNALMDMYAKCGSMRDA-RMVFDNMTEKDVASWNIMITGYGMHGYGD 426
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCN 333
D +R + L + ++ G ++ C+
Sbjct: 427 EALDTFTRMRQAQLVPNEISFVGLLSACS 455
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 135/280 (48%), Gaps = 20/280 (7%)
Query: 36 QAGQLEKAQELFDTVPIRN-----KIAWTCMISGYLSAGQVFKACDLFD--SMPDRDSIA 88
Q L K ++L T ++N +A T +I+ Y + A +F+ + D++ A
Sbjct: 41 QTTNLTKGKQL-HTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHHDKNVFA 99
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+ ++I+G+V N L + L+ +M G P TF + A G + + +++HG+
Sbjct: 100 YNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKKIHGLL 159
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K E D+ + ++LV+ Y K + D++ +F + RD + WNSM+ G + G EAL
Sbjct: 160 FKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGCFEEAL 219
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN- 266
++ M+E G+ P T GVL+ + G D G V+ + + G+ + ++N
Sbjct: 220 GMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNG-----QAVHGFLTKMGYHSSVVVLNA 274
Query: 267 LLGRAGKVKDAEEF--VLRLPVEPNHAIWGALVGV---CG 301
L+ GK K A + V + E + W +++ V CG
Sbjct: 275 LIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCG 314
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 199/357 (55%), Gaps = 3/357 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVP-IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
N++++ Y + G +E A ++F + RN + +ISGY+ G + A +F M + D
Sbjct: 498 NAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDL 557
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
W M+ Y +N+ +A+ LF ++ G P T L +A + RQ HG
Sbjct: 558 TTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGY 617
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
+++ +E DL L+ +L+ YAKCG I +Y+IF + +D + + +MI G + HG + +A
Sbjct: 618 IIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKA 676
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
L + ML G+ PD V F +L+AC+HAG + +G ++F+S+ +G++P + + +++
Sbjct: 677 LETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVD 736
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 326
LL R G V +A FV ++P+E N IWG L+G C + + ++ +L +++ +
Sbjct: 737 LLARGGHVSEAYSFVTKIPIEANANIWGTLLGACK-TYHEVELGRIVADKLFKIEANDIG 795
Query: 327 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
++ L N+YAA+DR + +RK MR K ++K GCSWI V+ ++F GD P
Sbjct: 796 NYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSHPQ 852
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 10/228 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN-ELIAEAISLFGEMMAHG-FS 118
+++ Y G + LFD D + W ++SGY ++ + A+ + +F M + G
Sbjct: 84 LLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVM 143
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID-DSYR 177
P + T A + L+ G+ +HG +K+ +E D N+LVSMYAKCG + D+Y
Sbjct: 144 PSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYA 203
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F ++ ++D +SWN+MI GL+++G EA +++ M++ + P+ T +L C A
Sbjct: 204 VFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVC--ASF 261
Query: 238 VDKGWELFNSMVNSYGLQ-PGFDHYISIINLL----GRAGKVKDAEEF 280
+ ++SY LQ P +S+ N L + G+ K+AE
Sbjct: 262 DENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESL 309
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 164/358 (45%), Gaps = 49/358 (13%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF------------- 47
MY+ GL+ + A+ ++ + D S N+MI G + G L++A LF
Sbjct: 190 MYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYA 249
Query: 48 ---DTVPI----RNKIAWTC-----------------------MISGYLSAGQVFKACDL 77
+ +P+ IA C ++S YL G+ +A L
Sbjct: 250 TVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESL 309
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAY 136
F +M RD ++W ++I+GY N +++ +FG +++ L+ T + A +
Sbjct: 310 FWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDN 369
Query: 137 LDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L G+Q+H ++ + + D N+LVS YAKCG I+++Y FS ++ +D ISWNS++
Sbjct: 370 LQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILD 429
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
+ S L++ ML+ + PD+VT L ++ CA V K E+ + S L
Sbjct: 430 AFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLL 489
Query: 256 PGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGL-SKTDADV 309
+ +I++ + G ++ A + L + N +L+ G GL S DA++
Sbjct: 490 CATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANM 547
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 38/256 (14%)
Query: 14 ALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFK 73
A GNLN ++GYV E DT A ++S Y G V
Sbjct: 157 ARSGNLNG------GKSVHGYVIKSGFE-----MDT------FAGNALVSMYAKCGLV-- 197
Query: 74 ACD---LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
ACD +FDS+ +D ++W +MI+G +N L+ EA SLF MM P +A +
Sbjct: 198 ACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKP---NYATVANI 254
Query: 131 MGSVAYLDQ------GRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
+ A D+ GRQ+H ++ D+ + N+L+S Y K G ++ +F M
Sbjct: 255 LPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMD 314
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGW 242
RD +SWN++I G + +G ++L V+ ++ L D+VT + +L ACA + G
Sbjct: 315 ARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGK 374
Query: 243 ELFNSMVNSYGLQPGF 258
+ V++Y L+ F
Sbjct: 375 Q-----VHAYILRHPF 385
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 46/295 (15%)
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMM--AHGFSPLNGTFAVLFGAMGSVAYLD 138
M R+ + W S I + EA+S F + + F P + A + + ++ +
Sbjct: 1 MLQRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASN 60
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
G+ LH VK + + +L++MYAKCG +DD +++F D + WN ++ G S
Sbjct: 61 LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 120
Query: 199 DHGRA-SEALTVYETMLEFG-LYPDTVTFLGVLTACAHAG-----------LVDKGWEL- 244
G+ ++ + V+ M G + P +VT VL CA +G ++ G+E+
Sbjct: 121 RSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMD 180
Query: 245 ---FNSMVNSY---GLQPG-----FDHYI--------SIINLLGRAGKVKDA---EEFVL 282
N++V+ Y GL FD I ++I L G +K+A ++
Sbjct: 181 TFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMM 240
Query: 283 RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL----LELDPLNAPGHVALCN 333
+ V+PN+A ++ VC + D ++A R +++ L+ L+A V++CN
Sbjct: 241 KGSVKPNYATVANILPVC--ASFDENIAHRCGRQIHSYVLQWPELSAD--VSVCN 291
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 183/323 (56%), Gaps = 1/323 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y +G++ A F MP +DS+ W MI + QN AI LF +M G + +
Sbjct: 525 YAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSL 584
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A + L G++LH V+ + D + ++L+ MY+KCG++ + +F M +
Sbjct: 585 SATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDW 644
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
++++SWNS+I +HGR E L ++ M+E G+ PD VTFL +++AC HAGLVD+G
Sbjct: 645 KNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYY 704
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
F M YG+ +H+ +++L GRAG++ +A + + +P P+ WG+L+G C L
Sbjct: 705 FRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRL-H 763
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
+ ++A A+K L+ELDP N+ +V L N++A + +R M+ KGV+K PG SW
Sbjct: 764 GNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSW 823
Query: 365 ILVKGRVHVFSSGDRLEPHVEDI 387
I V G H+FS+ D P +I
Sbjct: 824 IDVNGGTHMFSAADGCHPQSVEI 846
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 9/221 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A LFD +P RD I W M++GYV+N A+ F EM P
Sbjct: 218 LIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPN 277
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ +F L + + G QLHG+ +++ +E D + N++++MY+KCG + D+ +IF
Sbjct: 278 SVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFD 337
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M D ++WN +I G +G EA+ +++ M+ G+ D++TF L + +G +
Sbjct: 338 IMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKY 397
Query: 241 GWELFNSMVNSYGLQPG--FDHYI--SIINLLGRAGKVKDA 277
E V+SY ++ G FD Y+ +++++ + G V+ A
Sbjct: 398 CKE-----VHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMA 433
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 41/309 (13%)
Query: 28 NSMINGYVQAGQLEKA----QELFDTVPIRNKIAWTCM---------------------- 61
N M+NGYV+ G A QE+ ++ N +++ C+
Sbjct: 247 NVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIR 306
Query: 62 -------------ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISL 108
I+ Y G +F A +FD MP D++ W +I+GYVQN EA++L
Sbjct: 307 SGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVAL 366
Query: 109 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 168
F M+ G + TFA ++ L +++H V+ +D+ L+++LV +Y K
Sbjct: 367 FKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFK 426
Query: 169 CGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
G+++ + + F D +MI G +G EAL ++ +++ G+ P+ +T V
Sbjct: 427 GGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASV 486
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 288
L ACA + G EL ++ GL+ SI + ++G++ A +F R+PV+
Sbjct: 487 LPACAALASLKLGKELHCDILKK-GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK- 544
Query: 289 NHAIWGALV 297
+ W ++
Sbjct: 545 DSVCWNLMI 553
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAW-----TCMISGYLSAGQVFKAC 75
D + S + +++G L+ +E+ + +R+ + + + ++ Y G V AC
Sbjct: 376 KLDSITFASFLPSVLKSGSLKYCKEVHSYI-VRHGVPFDVYLKSALVDIYFKGGDVEMAC 434
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
F D T+MISGYV N L EA++LF ++ G P T A + A ++A
Sbjct: 435 KTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALA 494
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L G++LH +K E + +S+ MYAK G +D +Y+ F M +D + WN MI+
Sbjct: 495 SLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIV 554
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
S +G+ A+ ++ M G D+V+ L+ACA+ + G EL +V + +
Sbjct: 555 SFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFIS 614
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
F ++I++ + GK+ A V + N W +++ G
Sbjct: 615 DTFVAS-TLIDMYSKCGKLALARS-VFDMMDWKNEVSWNSIIAAYG 658
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 2/223 (0%)
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+LF + S+ W +I G+ A+ F M+ +P TF + A G +
Sbjct: 132 NLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLN 191
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+ + +H + + DL + +SL+ +Y G I D+ +F + RD I WN M+
Sbjct: 192 NVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLN 251
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G +G + AL ++ M + P++V+F+ +L+ CA G+V G +L ++ S G +
Sbjct: 252 GYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRS-GFE 310
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+II + + G + DA + +P + + W L+
Sbjct: 311 SDPTVANTIITMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIA 352
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 36/260 (13%)
Query: 20 NNFDDQSLNSMINGYVQAGQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKAC 75
FD SL++ ++ L +EL V I + + +I Y G++ A
Sbjct: 577 TKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALAR 636
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+FD M ++ ++W S+I+ Y + E + LF EM+ G P + TF V+ A G
Sbjct: 637 SVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAG 696
Query: 136 YLDQGRQLHGMQVKTIYEYDLILEN-----------SLVSMYAKCGEIDDSYRIFSNMAY 184
+D+G IY + + E +V +Y + G + +++ +M +
Sbjct: 697 LVDEG----------IYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPF 746
Query: 185 R-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
D +W S++ HG A + ++E L P+ + VL + HAG + WE
Sbjct: 747 TPDAGTWGSLLGACRLHGNVELAKLASKHLVE--LDPNNSGYY-VLLSNVHAGAGE--WE 801
Query: 244 ---LFNSMVNSYGLQ--PGF 258
S++ G+Q PG+
Sbjct: 802 SVLKVRSLMKEKGVQKIPGY 821
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 205/352 (58%), Gaps = 5/352 (1%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+++ Y + G + A+ ++ + I+++ A + +I GY S G++ KA LFDS+ +R+S+ W
Sbjct: 302 IVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVW 361
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
T++ SGY +++ E LF + + P + GA + A L G+Q+H +
Sbjct: 362 TALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYIL 421
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK--ISWNSMIMGLSDHGRASEA 206
+ + D L +++V MY+KCG I + + F M RD+ I +N MI G + HG ++A
Sbjct: 422 RMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKA 481
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ ++ ML+ + PD VTF+ +L+AC H GLV++G F SM Y + P +HY +++
Sbjct: 482 IQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISM-EDYSVLPEINHYACMVD 540
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 326
+ GRA +++ A EF+ ++P++ + IWGA + C ++ + + ++A + LL++
Sbjct: 541 MYGRANQLEKALEFMRKIPIQIDATIWGAFLNACQIN-NNTSLVNKAEEELLKIGADTGS 599
Query: 327 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
V L N+YA+ E+ +RK+MR+K +K GCSWI V+ +H F+SGD
Sbjct: 600 RCVQLANVYASEGNWNEMGRIRKKMRVKEAKKLTGCSWIYVENGIHAFTSGD 651
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 166/369 (44%), Gaps = 58/369 (15%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
+ N +I+ Y + G L+ A +LFD +P N +W +I Y+ A + +A +FDS DRD
Sbjct: 29 TCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFDSAVDRD 88
Query: 86 SIAWTSMISGYV-QNELIAEAISLFGEMMAH----GFSPLNGTFAVLFGA-MGSVAYLDQ 139
+++ SM+S YV + EA+ LF +M + G + T V F A + V Y
Sbjct: 89 LVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCY--- 145
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKC------------------------------ 169
G+Q+H VKT + +SL++MY+KC
Sbjct: 146 GKQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNAMVAACC 205
Query: 170 --GEIDDSYRIF-SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFL 226
GE+D + +F N D +SWN++I G + +G +AL ++ M E G+ D T
Sbjct: 206 REGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLA 265
Query: 227 GVLTACA-----HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 281
VL+ C+ G W L N ++ + G I++L + G ++ AE
Sbjct: 266 SVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSG------IVDLYCKCGNIRYAELVY 319
Query: 282 LRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 341
+ ++ A+ +VG S+ + A R LLE N+ ALC+ YA + +
Sbjct: 320 AGIGIKSQFAVSSLIVGYS--SQGEMMKAQRLFDSLLE---RNSVVWTALCSGYAKSQQC 374
Query: 342 IELTSLRKE 350
E+ L ++
Sbjct: 375 EEVFKLFRK 383
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 28 NSMINGYVQAGQLEKAQEL---FDTVPIRNKIAWTCMISGYLSAGQVFKACDLF-DSMPD 83
+S+IN Y + G A + FD V + ++ M++ G++ A ++F +
Sbjct: 166 SSLINMYSKCGLFRDACSVVSGFDGVV--DLVSKNAMVAACCREGEMDMALNVFWKNHEL 223
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
D+++W ++I+GY QN + +A++LF +M G T A + + +L G+ +
Sbjct: 224 NDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCV 283
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H +K Y + + + +V +Y KCG I + +++ + + + + +S+I+G S G
Sbjct: 284 HAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEM 343
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A +++++LE ++V + + + A + ++ ++LF V L P D I
Sbjct: 344 MKAQRLFDSLLE----RNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIP--DAMI- 396
Query: 264 IINLLGRAGKV------KDAEEFVLRLPVEPNHAIWGALVGV---CG 301
II +LG K ++LR+ ++ + + A+V + CG
Sbjct: 397 IIRVLGACATQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCG 443
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 199/358 (55%), Gaps = 1/358 (0%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
D N++++ Y + G L+ A+ +FD + ++ ++WTCMI+ Y + G + A + F+ M
Sbjct: 268 IDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQM 327
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P ++ ++W S+I +VQ L AEA+ LF M G + T + + + L G+
Sbjct: 328 PGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGK 387
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q H L N+++ MYAKCG + + +F M ++ +SWN +I L+ HG
Sbjct: 388 QAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHG 447
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
EA+ ++E M G+ PD +TF G+L+AC+H+GLVD G F M ++G+ P +HY
Sbjct: 448 YGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHY 507
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LLGR G + +A + ++PV+P+ +W AL+G C + + + + K+LLEL
Sbjct: 508 ACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACR-TYGNLAIGKQIMKQLLELG 566
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
N+ +V L N+Y+ + R ++ ++ K + G++K S+I + G + F D+
Sbjct: 567 RYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDK 624
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 35/270 (12%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y++ G + A +FD + +R ++W SMI+GY + EA+ +F EM G P T
Sbjct: 179 YVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTL 238
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L D GR +H V T E D I+ N+L+ MYAKCG + + +F M
Sbjct: 239 VGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLD 298
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETM---------------LEFGLYPDTV------ 223
+D +SW MI ++HG AL + M ++ GLY + V
Sbjct: 299 KDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRM 358
Query: 224 ----------TFLGVLTACAHAGLVDKGWELFNSMV-NSYGLQPGFDHYISIINLLGRAG 272
T + +L++C+H G + G + + + N+ L + +II++ + G
Sbjct: 359 CDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCN--AIIDMYAKCG 416
Query: 273 KVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
++ A + +P E N W ++G L
Sbjct: 417 ALQTAMDVFFGMP-EKNAVSWNVIIGALAL 445
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LFD +P + + +I GY + +++ L+ M+ G P T + A + +
Sbjct: 90 LFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSC 149
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
G +H K ++N+++++Y CG I + R+F +++ R +SWNSMI G
Sbjct: 150 YWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMING 209
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
S GR+ EA+ ++ M E GL PD T +G+L+ G D G + MV + G++
Sbjct: 210 YSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVT-GIEI 268
Query: 257 GFDHYISIINLLGRAGKVKDAE 278
+++++ + G +K A+
Sbjct: 269 DSIVTNALMDMYAKCGNLKCAK 290
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 217/406 (53%), Gaps = 43/406 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF------DTVP--- 51
MYS G ++ + + + D+ S SMI+G+V+ G ++A LF + VP
Sbjct: 480 MYSKCGCLEESYEVFQQAIVK-DNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHI 538
Query: 52 --------------IR----------------NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+R N + +++ Y G + A +FD +
Sbjct: 539 TLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDIL 598
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P +D+ A +S++SGY QN LI E+ LF +M+ + + T + GA + D G
Sbjct: 599 PHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGT 658
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
QLH K + D+ + +SL++MY+KCG I+D + F ++ D I W S+I+ + HG
Sbjct: 659 QLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQHG 718
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+ ++AL YE M G+ PD VTF+G+L+AC+H+GLV++ + NSM+ Y + P HY
Sbjct: 719 KGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSMIEDYKITPSHRHY 778
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
I+++LGR+G++++AE F+ +PVEPN IWG L+ C + D ++ A ++++ L+
Sbjct: 779 ACIVDILGRSGRLREAESFINNMPVEPNALIWGTLLAACKV-HGDFELGKLAAEKVMGLE 837
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
P + +V+ NI A ++ E+T +R + G++K P +W +V
Sbjct: 838 PSDVGAYVSFSNICADGEQWEEVTKIRSSLNKTGMKKEP--AWSVV 881
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 13/267 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
++ S+++ + +E+A+++ V I N +++ Y G V + F M
Sbjct: 339 TVTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEM 398
Query: 82 PD-RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+ +D W SM+S + QN A+ LF M+ G P + ++ L G
Sbjct: 399 KNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEYCIGS---LLSIMSSLSLG 455
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
Q+H +K + + SL +MY+KCG +++SY +F +D +SW SMI G +H
Sbjct: 456 SQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEH 515
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G +AL +++ ML + PD +T + +LTACA L+ G E+ S ++ L G +
Sbjct: 516 GYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHGS---TFRLGLGTNT 572
Query: 261 YI--SIINLLGRAGKVKDAEEFVLRLP 285
+ +++N+ + G + A + LP
Sbjct: 573 VVGGALVNMYSKCGSLSLARKVFDILP 599
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
+ N + + Y G + ++ ++F +D+++W SMISG+V++ +A+ LF E
Sbjct: 468 VTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKE 527
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M+ P + T + A + L GR++HG + + ++ +LV+MY+KCG
Sbjct: 528 MLYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGS 587
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+ + ++F + ++D + +S++ G + +G E+ ++ ML D T +L A
Sbjct: 588 LSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGA 647
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
+ D G +L ++ + GLQ S++ + + G ++D +
Sbjct: 648 ASLLCQSDIGTQL-HAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRK 694
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 147/311 (47%), Gaps = 41/311 (13%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMIS------------------ 63
S N MI+GYV+ K+ E+F + + ++ ++ ++S
Sbjct: 103 SWNVMISGYVRNSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLV 162
Query: 64 ---GYLSAGQV--------FKACDLFDSM-----PDRDSIA-WTSMISGYVQNELIAEAI 106
G+LS+G V K C+ +++ D++A W ++IS V+N A+
Sbjct: 163 VKNGFLSSGYVQTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVAL 222
Query: 107 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMY 166
+LF EM P + TF + A ++ + G+ +HG+ +K D+ +E ++V +Y
Sbjct: 223 NLFSEMCRASLMPNSYTFPSILTACCALKEMQIGKGVHGLAIKC-GATDVFVETAIVDLY 281
Query: 167 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFL 226
AK G + ++YR FS M ++ +SW ++I G + AL +++ M + G + T
Sbjct: 282 AKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVT 341
Query: 227 GVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV 286
VL+ACA L+++ ++ +S+V GL +++N+ + G V +E +
Sbjct: 342 SVLSACAKPELIEEAKQI-HSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKN 400
Query: 287 EPNHAIWGALV 297
+ IW +++
Sbjct: 401 MKDPGIWASML 411
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y + + A LFD++ ++W MISGYV+N + +++ +F M GF P
Sbjct: 76 LIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCRMHLFGFEPD 135
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
++ + A ++ G Q+ + VK + ++ +V M+ K ++ R F+
Sbjct: 136 EFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEALRFFN 195
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ + + SWN++I +G AL ++ M L P++ TF +LTAC
Sbjct: 196 DASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACC 248
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 19/285 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G + +A F M ++ ++WT++ISG+VQ + A+ LF +M G
Sbjct: 275 TAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHE 334
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
T + A +++ +Q+H + +K ++ + +LV+MYAK G + S
Sbjct: 335 INAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELA 394
Query: 179 FSNMA-YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
FS M +D W SM+ + + + AL ++ ML G+ PD C + L
Sbjct: 395 FSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEY--------CIGSLL 446
Query: 238 VDKGWELFNSMVNSYGLQPGFDHY----ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
S V+SY L+ G S+ + + G ++++ E V + + ++ W
Sbjct: 447 SIMSSLSLGSQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYE-VFQQAIVKDNVSW 505
Query: 294 GALVGVCGLSKTD-ADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+++ G + D A R K +L + + P H+ L +I A
Sbjct: 506 ASMIS--GFVEHGYPDQALRLFKEMLYQEVV--PDHITLISILTA 546
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 141 RQLHGMQVKTIY-EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
+ LH +KT Y + + +SL+ +Y K ++ ++++F + +SWN MI G
Sbjct: 54 KILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVR 113
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
+ ++L ++ M FG PD ++ VL+AC G ++F+ +V + L G+
Sbjct: 114 NSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYV 173
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
++++ + +A F + N A W A++ +
Sbjct: 174 Q-TQMVDMFCKNCNFSEALRFFNDASCD-NVASWNAIISL 211
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 185/327 (56%), Gaps = 1/327 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y S ++ AC +F ++ + WT++++G N+ EA+ +F EMM P
Sbjct: 268 LVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPN 327
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+F + + L++GR +H +K E + NSLV MY+KCG I D+ +F
Sbjct: 328 ESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFK 387
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ ++ +SWNS+I+G + HG + AL +++ ML G+ D +T G+L+AC+ +G++ K
Sbjct: 388 GICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQK 447
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
F ++ +HY ++++LGR G+V++AE +PVE N +W L+ C
Sbjct: 448 ARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSAC 507
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + DVA RA KR+ E++P + +V L N+YA++ R +E+ +R +M+ G+ K P
Sbjct: 508 RV-HSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQP 566
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDI 387
G SWI +KG H F S DR P E+I
Sbjct: 567 GSSWITLKGMRHEFLSADRSHPLTEEI 593
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 46/322 (14%)
Query: 20 NNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 79
N D S NS+I + A +LFD +P RN I+WT +I G+LS G+V +A F+
Sbjct: 90 NTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFN 149
Query: 80 SMP--DRDSIAWTSMISGYVQNELIAEAISLFGEMMAH---------------------- 115
+MP D+D W +M++GY N + +A+ LF +M +
Sbjct: 150 AMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQAL 209
Query: 116 -------GFSPLNGTFAVLFGAMGSVA-YLD--QGRQLHGMQVKTIY--EYDLILENSLV 163
GFS + + L + + A LD G Q+H K + D + SLV
Sbjct: 210 FFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLV 269
Query: 164 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
+ YA C + D+ ++F ++ + W +++ G + + EAL V+ M+ F + P+
Sbjct: 270 TFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNES 329
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEE 279
+F L +C ++KG ++++ G++ G ++ + S++ + + G + DA
Sbjct: 330 SFTSALNSCVGLEDLEKG-----RVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDA-L 383
Query: 280 FVLRLPVEPNHAIWGALVGVCG 301
V + E N W +++ C
Sbjct: 384 CVFKGICEKNVVSWNSVIVGCA 405
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 180/324 (55%), Gaps = 1/324 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +F+S + D ++ T ++ + QN EAI +F +M+A G
Sbjct: 296 YSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMV 355
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ + G G YL G+Q+H + +K + + + N LV+MY+KCG++ DS +F M
Sbjct: 356 SAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQ 415
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
++ +SWNS+I + HG +AL YE M G+ P VTFL +L AC+HAGLV+KG EL
Sbjct: 416 KNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMEL 475
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
SM N +G+ P +HY ++++LGRAG + +A++F+ LP +W AL+G C +
Sbjct: 476 LESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSI-H 534
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
D+++ A RL P + +V + NIY++ E S K M+ GV K G SW
Sbjct: 535 GDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGISW 594
Query: 365 ILVKGRVHVFSSGDRLEPHVEDIL 388
I ++ +V+ F GD+L P + I
Sbjct: 595 IEIEKKVNSFVVGDKLHPEADVIF 618
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S+ MI+G V G E R +I+ Y + +FD M +R+
Sbjct: 166 SVTQMIHGLVFVGGFE-----------REITVGNALITSYFKCECFSQGRKVFDEMIERN 214
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+ WT++ISG QNE +++ LF +M G SP T+ A + L G+++H
Sbjct: 215 VVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIH 274
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G+ K + DL +E++L+ +Y+KCG +D +++IF + D +S +++ + +G
Sbjct: 275 GLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEE 334
Query: 205 EALTVYETMLEFGLYPDTVTFLGVL 229
EA+ ++ M+ G+ D VL
Sbjct: 335 EAIQIFTKMVALGMEVDANMVSAVL 359
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 114/232 (49%), Gaps = 18/232 (7%)
Query: 58 WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM---- 113
W ++S Y G+ A ++FD MP RD+++W +MISG+++N + F +M
Sbjct: 80 WNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNR 139
Query: 114 -------AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMY 166
A + L+G + G SV + +HG+ +E ++ + N+L++ Y
Sbjct: 140 VCCRFDKATLTTMLSGCDGLRLGISTSVT-----QMIHGLVFVGGFEREITVGNALITSY 194
Query: 167 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTF 225
KC ++F M R+ ++W ++I GL+ + ++L ++ M G + P+ +T+
Sbjct: 195 FKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTY 254
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
L L AC+ ++ G ++ + ++ G+Q ++++L + G + A
Sbjct: 255 LSSLMACSGLQVLRDGQKI-HGLLWKLGMQSDLCIESALMDLYSKCGSLDAA 305
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 137 LDQGRQLHGMQVKTIYEYD--------LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
L G +H +K +D L + NSL+SMY+KCGE ++ +F M RD +
Sbjct: 50 LTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTV 109
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYP---DTVTFLGVLTACAHAGLVDKGWELF 245
SWN+MI G +G + ++ M E D T +L+ C GL
Sbjct: 110 SWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGC--DGLRLGISTSV 167
Query: 246 NSMVNSYGLQPGFDHYISIINLL 268
M++ GF+ I++ N L
Sbjct: 168 TQMIHGLVFVGGFEREITVGNAL 190
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 194/353 (54%), Gaps = 3/353 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I Y + G L A+ELFD + ++++++ +ISGY+ G V +A D+ + +
Sbjct: 298 NAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLS 357
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQGRQLHG 145
W +I G VQN A+ L EM G + P T + + + L +++HG
Sbjct: 358 TWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHG 417
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
++ Y+ ++ + ++V YAK G I + R+F R I W S+I + HG AS
Sbjct: 418 YAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYASHGDASL 477
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
AL +Y ML+ G+ PD VT VLTACAH+GLV++ W++FN+M + +G+QP +HY ++
Sbjct: 478 ALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYACMV 537
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
+L RAGK+ +AE+F+ ++P EP +WGAL+ + D ++ A L E++P +
Sbjct: 538 GVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYD-DVEIGKFACDHLFEIEPEHT 596
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
++ + N+Y+ R E +R+ M G K G SWI G++ F + D
Sbjct: 597 GNYIIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSSWIETSGKLLGFIAKD 649
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 11/253 (4%)
Query: 36 QAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 95
Q QL F P N IA T +I+ Y + + A ++FD +P ++S +W SMI
Sbjct: 67 QGKQLHARFFPFAITP-DNFIA-TKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMIIA 124
Query: 96 YVQNELIAEAISLFGEMMA---HGFSPLNGTFAVLFG--AMGSVAYLDQGRQLHGMQVKT 150
Y L +A+SLF ++ + SP N T + A+ S +Q+H +
Sbjct: 125 YTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSALLR 184
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 210
+ D+ + N+LV+ Y +CG I+ + ++F M RD ++WN+MI G S G E +Y
Sbjct: 185 GFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLY 244
Query: 211 ETMLEF---GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
ML G+ P+ VT V+ AC + + G E+ M + G++ +II +
Sbjct: 245 LEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDD-GIETDVFLCNAIIAM 303
Query: 268 LGRAGKVKDAEEF 280
+ G + A E
Sbjct: 304 YAKCGSLNYAREL 316
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 11/244 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA---HGF 117
+++ Y G++ A +FD M +RD + W +MI GY Q+ E L+ EM+ G
Sbjct: 196 LVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGI 255
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T + A G L G ++H E D+ L N++++MYAKCG ++ +
Sbjct: 256 LPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARE 315
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M +D++S+ S+I G +G EAL V + + GL T+ V+
Sbjct: 316 LFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGL----STWNDVIPGMVQNNQ 371
Query: 238 VDKGWELFNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEE---FVLRLPVEPNHAIW 293
++ +L M L+P SII L ++ +E + +R + N +
Sbjct: 372 FERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVA 431
Query: 294 GALV 297
A+V
Sbjct: 432 TAIV 435
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ QG+QLH D + L++ YAK I ++ +F + +++ SWNSMI+
Sbjct: 65 IRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMIIA 124
Query: 197 LSDHGRASEALTVYETML---EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS--MVNS 251
+ ++AL+++ + + + + PD T +L A + V + S ++
Sbjct: 125 YTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSV-----CYKSAKQIHC 179
Query: 252 YGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
L GF + ++N L R G+++ A + V E + W A++G
Sbjct: 180 SALLRGFYSDVCVLNALVTCYCRCGRIEIARK-VFDEMTERDIVTWNAMIG 229
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 201/339 (59%), Gaps = 12/339 (3%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
NFD+ SL S ++G+V E D V + +I Y G + A LF+
Sbjct: 354 NFDNLSLASQVHGFVITSGYE-----LDCV------VGSILIDIYAKQGSINNALRLFER 402
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+PD+D +AW+S+I+G + A SLF +M+ G + +++ A S+A G
Sbjct: 403 LPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHG 462
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+Q+H + +K YE + ++ +L+ MYAKCG+I+D+ +F ++ D +SW S+I+G + +
Sbjct: 463 KQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQN 522
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
GRA EA+++ M+E G P+ +T LGVLTAC H+GLV++ W++FNS+ ++GL P +H
Sbjct: 523 GRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEH 582
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y ++++LG+AG+ ++A + + +P +P+ IW +L+G CG K + D+A+ + LL
Sbjct: 583 YNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYK-NRDLANIVAEHLLAT 641
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
P + ++ L N+YAA ++ +R+ ++ G ++A
Sbjct: 642 SPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRA 680
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 30/296 (10%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
+N++++ YV+ G L AQ +F +P +N +W +I GY G + A LFD MP+ D
Sbjct: 143 MNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDI 202
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++W S+I+G V N + A+ M G TF + A G L GR++H
Sbjct: 203 VSWNSIIAGLVDNA-SSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCY 261
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-----WNSMIMGLSDHG 201
+K+ +E ++L+ MY+ C + ++ +IF +S WNSM+ G +G
Sbjct: 262 IIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNG 321
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTAC-----------AHAGLVDKGWELFNSMVN 250
EAL++ M G+ D TF VL C H ++ G+EL + +V
Sbjct: 322 DYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYEL-DCVVG 380
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 306
S +I++ + G + +A RLP + + W +L+ C +D
Sbjct: 381 SI-----------LIDIYAKQGSINNALRLFERLP-DKDVVAWSSLITGCARFGSD 424
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF-SP 119
MIS Y + A ++FD MP R+ ++WT+M+S + + EA+SL+ EM+ P
Sbjct: 44 MISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQP 103
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
++ + A G V ++ G+ +H + + D++L N+L+ MY KCG + D+ R+F
Sbjct: 104 NQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVF 163
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ ++ SWN++I+G + G +A+ +++ M E PD V++ ++ AGLVD
Sbjct: 164 CEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPE----PDIVSWNSII-----AGLVD 214
Query: 240 KGWE---LFNSMVNSYGLQ 255
F SM++ GL+
Sbjct: 215 NASSRALRFVSMMHGKGLK 233
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIA-----WTSMISGYVQNELIAEAISLFGEMM 113
+ +I Y S + +A +FD S++ W SM+SG+V N EA+S+ M
Sbjct: 275 SALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMH 334
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G TF+++ + L Q+HG + + YE D ++ + L+ +YAK G I+
Sbjct: 335 RSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSIN 394
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
++ R+F + +D ++W+S+I G + G A +++ M+ GL D VL AC+
Sbjct: 395 NALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACS 454
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDH----YISIINLLGRAGKVKDA 277
G + V+S L+ G++ ++I++ + G ++DA
Sbjct: 455 SLASHQHGKQ-----VHSLCLKKGYESEGVVTTALIDMYAKCGDIEDA 497
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 31/256 (12%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ + LH +K+ + + + N+++S+Y+KC I D+ +F M +R+ +SW +M+
Sbjct: 19 IKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSV 78
Query: 197 LSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
L++ EAL++Y M+E + P+ + VL AC GLV + EL MV+ + Q
Sbjct: 79 LTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKAC---GLV-RNVEL-GKMVHYHIFQ 133
Query: 256 PGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
D I ++N L + G ++DA+ +P + N W L+ L +
Sbjct: 134 AKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCK-NATSWNTLI----LGYAKQGLID 188
Query: 312 RATKRLLELDPLNAPGHVALCNIYA-----ANDRHIELTSLRK-------EMRIKGVRKA 359
A K D + P V+ +I A A+ R + S+ E V KA
Sbjct: 189 DAMKL---FDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKA 245
Query: 360 PGCSWILVKGR-VHVF 374
GCS L+ GR +H +
Sbjct: 246 CGCSDELMLGREIHCY 261
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 203/373 (54%), Gaps = 6/373 (1%)
Query: 20 NNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKAC 75
+ FD +L S+I G Q LE + L + + N + T ++ Y G + +A
Sbjct: 336 DGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQAS 395
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
D+F +M R+ I WT+M+ G QN A+ LF M + + T L +
Sbjct: 396 DVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLG 455
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN-MAYRDKISWNSMI 194
L +GR +HG ++ YE++ + ++L+ MYAKCG+I + ++F N +D I NSMI
Sbjct: 456 SLKKGRSVHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMI 515
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
MG HG+ +AL VY+ M++ L P+ TF+ +LTAC+H+GLV++G LF+ M + +
Sbjct: 516 MGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCMERVHNI 575
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
+P HY ++LL RAG +++A V ++PVEP+ + AL+G C + K + ++ +
Sbjct: 576 KPSDKHYACFVDLLSRAGYLEEAYALVKQIPVEPSIDVLEALLGGCRIHK-NINMGIQIA 634
Query: 315 KRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVF 374
RL+ LD LN +V L NIY+ R + +R MR +G++K P S V +V F
Sbjct: 635 DRLISLDYLNTGIYVMLSNIYSEARRWESVNYIRGLMRKRGLKKTPAFSLTEVGNQVFTF 694
Query: 375 SSGDRLEPHVEDI 387
+GD P E+I
Sbjct: 695 FAGDDSHPGWENI 707
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 142/292 (48%), Gaps = 40/292 (13%)
Query: 28 NSMINGYVQAGQLEKAQELF---DTVPIR-----------------NKIAWTC------- 60
NS+I GYVQ G L++ +LF + IR +K TC
Sbjct: 208 NSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLA 267
Query: 61 ------------MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISL 108
++ Y + G A +F+ M R I+W +MISG VQN ++ E+ SL
Sbjct: 268 LGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSL 327
Query: 109 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 168
F +++ G +GT L + L+ G+ LH ++ E +L+L ++V MY+K
Sbjct: 328 FHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSK 387
Query: 169 CGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
CG I + +F M R+ I+W +M++GLS +G A AL ++ M E + ++VT + +
Sbjct: 388 CGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSL 447
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
+ CAH G + KG + ++ +G + + ++I++ + GK+ AE+
Sbjct: 448 VHCCAHLGSLKKGRSVHGHLIR-HGYEFNAVNMSALIDMYAKCGKIHSAEKL 498
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 4/244 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
MI+ + G + A +FD MP+RD + W S+I GYVQ L+ E I LF EM++ G P
Sbjct: 179 MINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPS 238
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T A + A G + G +H + D+ + SLV MY G+ + ++ +F+
Sbjct: 239 SVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFN 298
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M R ISWN+MI G +G E+ +++ +++ G D+ T + ++ C+ ++
Sbjct: 299 RMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLEN 358
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G ++ ++ + GL+ +I+++ + G +K A + V R + N W A+ +
Sbjct: 359 G-KVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASD-VFRTMEKRNVITWTAM--LV 414
Query: 301 GLSK 304
GLS+
Sbjct: 415 GLSQ 418
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y + G + A +FD P R++I +M+ G+++N E LF +MM
Sbjct: 76 TKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLF-KMMGLRDI 134
Query: 119 PLNGTFAVLFGAMGSVAYLDQ--GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
LN ++ +FG LD G +L M V+ + + +S+++ KCG ++D+
Sbjct: 135 ELN-SYTCVFGLKACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDAR 193
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+F M RD + WNS+I G G E + ++ M+ G+ P +VT +L AC +G
Sbjct: 194 MVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESG 253
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 200/369 (54%), Gaps = 5/369 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D ++ I Y G+L KA+ LFD ++ + WT MI GY G V A ++FD MP
Sbjct: 149 DAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMP 208
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+R+ ++W++M++ Y + E + LF EM + G P + + A + L QG
Sbjct: 209 ERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQGMW 268
Query: 143 LHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+H + + IL +LV MY+KCG ++ + +F ++ +D +WN+MI G++ +G
Sbjct: 269 VHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISGVALNG 328
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A ++L +++ M+ G P+ TF+ VLTAC HA +V +G LF M +YG++P +HY
Sbjct: 329 DARKSLELFQQMIVCGNKPNETTFVAVLTACTHARMVREGLRLFEEMSGTYGVEPCAEHY 388
Query: 262 ISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+++LL R+G V++AE F+ + +WGA++ C + K + +V +R K+L+
Sbjct: 389 ACVVDLLSRSGMVEEAERFIEEKMGGFAAGDANVWGAILNACRIYK-NINVGNRVWKKLI 447
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
++ + HV NIY E +R + G++K PGCS I V V F +GD
Sbjct: 448 DMGVADCGTHVLTYNIYREAGWDAEANRVRSMISEAGMKKKPGCSIIEVGNEVEEFLAGD 507
Query: 379 RLEPHVEDI 387
+ P +++
Sbjct: 508 QSHPQAQEM 516
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 182/311 (58%), Gaps = 1/311 (0%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD P D++ W++MI+G+V+ + A+ LF EM G P T + A +
Sbjct: 184 VFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGA 243
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L+ G+ + K + L N+L+ M+AKCG +D + ++F M R +SW S+I G
Sbjct: 244 LELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAG 303
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
L+ HGR +A+++++ M+E G+ PD V F+GVL+AC+H+GLVDKG F SM ++ + P
Sbjct: 304 LAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVP 363
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
+HY +++LL R G VK+A EFV ++P EPN IW ++ C + + + +K
Sbjct: 364 KVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACH-ATGELKLGESISKE 422
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
L++ +P++ +V L NIYA + + T +R+ M ++G++K PG + I V ++ F +
Sbjct: 423 LIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVA 482
Query: 377 GDRLEPHVEDI 387
GD+ ++I
Sbjct: 483 GDKSHDQYKEI 493
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 4/199 (2%)
Query: 82 PDRDSIAWTSMISGYVQN-ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
P D+ + ++I Y Q + + + + M+ +G +P TF + + L G
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGE--IDDSYRIFSNMAYRDKISWNSMIMGLS 198
+ +HG VK +E D+ + N+L+ MY GE + + ++F + D ++W++MI G
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFV 204
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
G +S A+ ++ M G+ PD +T + VL+ACA G ++ G + S V +
Sbjct: 205 RLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELG-KWVESYVEKKNIPKSV 263
Query: 259 DHYISIINLLGRAGKVKDA 277
+ ++I++ + G V A
Sbjct: 264 ELCNALIDMFAKCGNVDKA 282
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
L + YV+ + K+ EL + +I + G V KA LF M R
Sbjct: 246 LGKWVESYVEKKNIPKSVELCNA-----------LIDMFAKCGNVDKAIKLFRQMDSRTI 294
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++WTS+I+G + +A+SLF EM+ +G +P + F + A +D+GR G
Sbjct: 295 VSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGS 354
Query: 147 QVKTIYEYDLILE-NSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHG 201
+ + +V + + G + +++ M + ++I W ++I G
Sbjct: 355 MERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATG 411
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 191/331 (57%), Gaps = 8/331 (2%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
++ Y+ G+V +FD + +D I W +MISGY QN + ++ EM G +N
Sbjct: 203 LTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVG--GVN 260
Query: 122 GTFAVLFGAMGSVAYLDQ---GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
L G + S A L GR++ + + + L N+L++MYA+CG + + +
Sbjct: 261 PDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREV 320
Query: 179 FSNMAYRDK--ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
F M R K +SW ++I G HG A+ +++ M+ G+ PD F+ VL+AC+HAG
Sbjct: 321 FDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAG 380
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
L +KG E F+ M YGLQPG +HY +++LLGR+G++K+A + + + V+P+ +WGAL
Sbjct: 381 LTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLIDLMKVKPDGPVWGAL 440
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + + + ++A A + ++EL+P N +V L N+Y+ + +R MR + +
Sbjct: 441 LGACKIHR-NVELAEVAFQHVIELEPTNIGYYVLLSNLYSDTKNLEGVLKVRVMMRDRNL 499
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
RK PGCS++ KG++H+F SGD P ++I
Sbjct: 500 RKDPGCSYVEYKGKMHLFYSGDTSHPQSKEI 530
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 4/232 (1%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMG 132
A +FD P +I++ +MISGY N +I EAI LF M+ +N T L +
Sbjct: 113 ARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTMLGLVSGIL 172
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
L G LHG K +E DL + NS ++MY KCGE++ ++F + +D I+WN+
Sbjct: 173 VPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNA 232
Query: 193 MIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
MI G + +G A L +Y M + G+ PD VT LGVL +CA+ G G E+ ++
Sbjct: 233 MISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREV-EKEIDR 291
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI-WGALVGVCGL 302
+G + ++IN+ R G + A E + + W A++G G+
Sbjct: 292 FGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGI 343
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+ AW + + EA++++ M+ F P TF VL + ++ G QLH
Sbjct: 24 TTAWNCYLRELSKQRKFMEALTVYRHMLRSSFFPNTFTFPVLLKSCALLSLPFTGSQLHS 83
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+KT + D +SL++MY+K + ++F IS+N+MI G +++ E
Sbjct: 84 HILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVE 143
Query: 206 ALTVYETML-EFGLYPDTVTFLGVLTA-----------CAHAGLVDKGWELFNSMVNSY 252
A+ ++ ML E + ++VT LG+++ C H G+E S+ NS+
Sbjct: 144 AIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSF 202
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 174/305 (57%), Gaps = 1/305 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ YL ++ + FD +P +D +WT M G +Q A+++ +M G P
Sbjct: 200 LVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPN 259
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T A A +A +++G+Q HG+++K + D+ ++N+L+ MYAKCG +D ++ +F
Sbjct: 260 KFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFR 319
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ R +SW +MIM + +G+ EAL +++ M E + P+ +TF+ VL AC+ G VD+
Sbjct: 320 STNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDE 379
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GW+ +SM YG+ PG DHYI ++++LGRAG +K+A+E +LR+P P +W L+ C
Sbjct: 380 GWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSAC 439
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ D + A + ++ D + +V L N+ A + SLR+ M + V+K P
Sbjct: 440 QI-HGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVP 498
Query: 361 GCSWI 365
G SWI
Sbjct: 499 GSSWI 503
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 23/221 (10%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF-SPLNGT 123
Y+ + A LFD MP+R+ ++W+S+++G V N ++A+SLF M GF P T
Sbjct: 2 YIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFT 61
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
F A + Q Q++ + V++ E ++ L N+ ++ + G++ ++ +IF
Sbjct: 62 FVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSP 121
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVY-ETMLEFGLYPDTVTFLGVLTACA--------- 233
RD ++WN+M+ G + +SE + V+ M G+ PD TF LT A
Sbjct: 122 IRDTVTWNTMMGGYLEF--SSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGM 179
Query: 234 --HAGLVDKGWE----LFNSMVNSY----GLQPGFDHYISI 264
HA LV G+ + NS+V+ Y L+ GF + I
Sbjct: 180 QVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEI 220
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTV 223
MY KC ++ + ++F M R+ +SW+S++ G +G AS+AL+++ M G + P+
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 283
TF+ L AC+ + V + +++++ +V S GL+ + + L R GK+ +A +
Sbjct: 61 TFVSALQACSLSENVTQAYQIYSLVVRS-GLECNVFLLNAFLTALVRNGKLTEALQIFET 119
Query: 284 LPVEPNHAIWGALVG 298
P+ + W ++G
Sbjct: 120 SPIR-DTVTWNTMMG 133
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 196/340 (57%), Gaps = 9/340 (2%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKI-AWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
++I Y G ++ A F+ V +++ + +W + +G++ G + A FD M RD
Sbjct: 357 TIIYFYAACGMMDLACLQFE-VGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVF 415
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W++MISGY Q+E A+ LF +M+A G P T +F A+ ++ L +G+ H
Sbjct: 416 SWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYM 475
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS----WNSMIMGLSDHGRA 203
++ L +L+ MYAKCG I+ + + F+ + RD++S WN++I GL+ HG A
Sbjct: 476 RSESIPFNDNLRAALIDMYAKCGSINSALQFFNQI--RDEVSSVSPWNAIICGLASHGHA 533
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
S L V+ M F + P+ +TF+GVL+AC HAGLV+ G +F +M ++Y ++P HY
Sbjct: 534 SMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGC 593
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+I++LGRAG +++AEE + +P+E + IWG L+ C + + ++ RA + L L P
Sbjct: 594 MIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAAC-RTHGNVNIGERAAENLARLAPS 652
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
+ G V L NIYA + E++ +R M+ + + + PG S
Sbjct: 653 HGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 36/272 (13%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
+F+ NS+IN Y + G ++ AQ LFD + ++ M+SGY+ GQ+ A LFD
Sbjct: 85 HFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDV 144
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
MP++ +++T+MI G+VQN EA+ +F +M + G P + T + A + +
Sbjct: 145 MPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNC 204
Query: 141 RQLHGMQVKTIY-------------------------------EYDLILENSLVSMYAKC 169
R +HG+ VK E +L+ N +++ YAK
Sbjct: 205 RMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKT 264
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
G +D++ +F + +D ISW +MI G GR EAL +Y ML+ G P+ V + ++
Sbjct: 265 GLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLV 324
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+AC + GW+L ++V + GFD Y
Sbjct: 325 SACGRGTAIVDGWQLHGTVV-----KRGFDCY 351
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 35/307 (11%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
++++ Y + +A+ LFD +P RN + W M++GY G V +A +LFD + D+D I+
Sbjct: 225 NLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVIS 284
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
W +MI GY+Q + EA+ ++ M+ G P L A G + G QLHG V
Sbjct: 285 WGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVV 344
Query: 149 KTIYEYDLILENSLVSMYAKC-------------------------------GEIDDSYR 177
K ++ ++ +++ YA C G +D + +
Sbjct: 345 KRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALK 404
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
F M RD SW++MI G + AL ++ ML G+ P+ VT + V +A A G
Sbjct: 405 TFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGT 464
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH-AIWGAL 296
+ +G +L + + S + + ++I++ + G + A +F ++ E + + W A+
Sbjct: 465 LQEG-KLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAI 523
Query: 297 VGVCGLS 303
+CGL+
Sbjct: 524 --ICGLA 528
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 31/137 (22%)
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC----------------------- 169
S++++ QGRQ+H + K ++ ++NSL++MYAKC
Sbjct: 65 SLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNI 124
Query: 170 --------GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
G+ID++ ++F M + +S+ +MIMG +G EAL V++ M G+ P+
Sbjct: 125 MVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPN 184
Query: 222 TVTFLGVLTACAHAGLV 238
+T + V++AC+H G V
Sbjct: 185 DLTLVNVISACSHLGEV 201
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 196/355 (55%), Gaps = 15/355 (4%)
Query: 26 SLNSMINGYV-QAGQLEKAQEL--------FDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
+L S+IN V Q G LE L FDT + + ++ Y + GQ+ A
Sbjct: 149 TLTSVINACVGQNGVLEHCPTLHVHVIKQGFDT----SSFVISSLVDCYANWGQIDDAVL 204
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF+ ++D++ + +MISGY QN +A+ LF EM SP + T + + A S+A
Sbjct: 205 LFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAM 264
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L QGRQ+H + +K E ++ + ++L+ MY+K G+ID++ + + ++ + W SMIMG
Sbjct: 265 LLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMG 324
Query: 197 LSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
+ GR EAL +++ +L + L PD V F VLTAC HAG +DKG E FN M+ +YGL
Sbjct: 325 YAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLS 384
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
P D Y +I+L R G ++ A + + +P +PN IW + + C + D ++ A
Sbjct: 385 PDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYG-DVELGREAAI 443
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGR 370
+L++++P NA ++ L +IY E + +R M+ + RK PG S L +GR
Sbjct: 444 QLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKPPGWSMELGRGR 498
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 121/238 (50%), Gaps = 3/238 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y + A +F +M D ++WTS+I+G+ N+ +A+ LF EM+ P
Sbjct: 87 LVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPN 146
Query: 121 NGTF-AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T +V+ +G L+ LH +K ++ + +SLV YA G+IDD+ +F
Sbjct: 147 CFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLF 206
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ + +D + +N+MI G + + +AL ++ M E + P T +L+AC+ ++
Sbjct: 207 NETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLL 266
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+G ++ +S+V G + ++I++ + G + +A + VL + N +W +++
Sbjct: 267 QGRQV-HSLVIKMGSERNVYVASTLIDMYSKGGDIDEA-QCVLDQTSKKNTVLWTSMI 322
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 116 GFSPLNG-----TFAVLFGAMGSVAYL---DQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
S +NG T VL A+ S A G Q+H +++ YE +L L ++LV YA
Sbjct: 33 SLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYA 92
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
KC I D+ +IF M D++SW S+I G S + + +AL +++ ML + P+ T
Sbjct: 93 KCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTS 152
Query: 228 VLTACA------------HAGLVDKGWE----LFNSMVNSYGLQPGFDHYISIIN 266
V+ AC H ++ +G++ + +S+V+ Y D + + N
Sbjct: 153 VINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFN 207
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 196/355 (55%), Gaps = 15/355 (4%)
Query: 26 SLNSMINGYV-QAGQLEKAQEL--------FDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
+L S+IN V Q G LE L FDT + + ++ Y + GQ+ A
Sbjct: 149 TLTSVINACVGQNGVLEHCPTLHVHVIKQGFDT----SSFVISSLVDCYANWGQIDDAVL 204
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF+ ++D++ + +MISGY QN +A+ LF EM SP + T + + A S+A
Sbjct: 205 LFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAM 264
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L QGRQ+H + +K E ++ + ++L+ MY+K G+ID++ + + ++ + W SMIMG
Sbjct: 265 LLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMG 324
Query: 197 LSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
+ GR EAL +++ +L + L PD V F VLTAC HAG +DKG E FN M+ +YGL
Sbjct: 325 YAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLS 384
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
P D Y +I+L R G ++ A + + +P +PN IW + + C + D ++ A
Sbjct: 385 PDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYG-DVELGREAAI 443
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGR 370
+L++++P NA ++ L +IY E + +R M+ + RK PG S L +GR
Sbjct: 444 QLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKPPGWSMELGRGR 498
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 121/238 (50%), Gaps = 3/238 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y + A +F +M D ++WTS+I+G+ N+ +A+ LF EM+ P
Sbjct: 87 LVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPN 146
Query: 121 NGTF-AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T +V+ +G L+ LH +K ++ + +SLV YA G+IDD+ +F
Sbjct: 147 CFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLF 206
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ + +D + +N+MI G + + +AL ++ M E + P T +L+AC+ ++
Sbjct: 207 NETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLL 266
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+G ++ +S+V G + ++I++ + G + +A + VL + N +W +++
Sbjct: 267 QGRQV-HSLVIKMGSERNVYVASTLIDMYSKGGDIDEA-QCVLDQTSKKNTVLWTSMI 322
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 116 GFSPLNG-----TFAVLFGAMGSVAYL---DQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
S +NG T VL A+ S A G Q+H +++ YE +L L ++LV YA
Sbjct: 33 SLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYA 92
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
KC I D+ +IF M D++SW S+I G S + + +AL +++ ML + P+ T
Sbjct: 93 KCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTS 152
Query: 228 VLTACA------------HAGLVDKGWE----LFNSMVNSYGLQPGFDHYISIIN 266
V+ AC H ++ +G++ + +S+V+ Y D + + N
Sbjct: 153 VINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFN 207
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 199/356 (55%), Gaps = 6/356 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+I+ ++ G + A+++FD + +R+ ++W M+ GYL G+V A +LF M R+ I
Sbjct: 168 NSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNII 227
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHG----FSPLNGTFAVLFGAMGSVAYLDQGRQL 143
W S+I+G VQ E++ +F EM P T A + A + +D G+ +
Sbjct: 228 TWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWV 287
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H K E D+++ +LV+MY KCG++ + IF++M +D +W +MI + HG
Sbjct: 288 HAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFG 347
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A + M + G+ P+ VTF+G+L+AC+H+GLV++G F+ M Y ++P HY
Sbjct: 348 KKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYAC 407
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
++++L RA +A + +P++P+ +WGAL+G C + + + + L++L+P
Sbjct: 408 MVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMH-GNIKLGEKVAHYLIDLEPH 466
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR-KAPGCSWILVKGRVHVFSSGD 378
N ++ LC+IY ++ +R M+ +G+ K PGCS I + G V FS G+
Sbjct: 467 NHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVGE 522
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 43/271 (15%)
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ-GRQLHGMQVKTIYEYDLILENSL 162
+A+ L+ +M+ G P N TF L + Y G +H +K + D+ + NSL
Sbjct: 111 KALMLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSL 170
Query: 163 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSM----------------------------- 193
+S++ G ++ ++F M RD +SWNSM
Sbjct: 171 ISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWN 230
Query: 194 --IMGLSDHGRASEALTVYETMLEFG----LYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
I GL G A E+L ++ M + PD +T VL+ACA G +D G + ++
Sbjct: 231 SIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHG-KWVHA 289
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDA 307
+ ++ +++N+ G+ G V+ A E +P E + + W A++ V L
Sbjct: 290 YLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMP-EKDASAWTAMISVFALH---- 344
Query: 308 DVASRATKRLLELDPLNA-PGHVALCNIYAA 337
+A LE++ P HV + +A
Sbjct: 345 GFGKKAFDCFLEMEKAGVKPNHVTFVGLLSA 375
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 180/323 (55%), Gaps = 1/323 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + + A +FD M R+ +AW +MI G+ + E + L EM+ GF P
Sbjct: 311 LINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPD 370
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + + + G + + + Q+H VK + L + NSL+S Y+KCG I +++ F
Sbjct: 371 ELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFE 430
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ D ++W S+I + HG A ++ ++E ML +G+ PD + FLGVL+ACAH GLV K
Sbjct: 431 LTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTK 490
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G F M N+Y + P +HY +++LLGR G + +A E + +P+E + GA +G C
Sbjct: 491 GLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSC 550
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
L ++ ++A A ++L ++P + + + NI+A+ ++ +RK M K K P
Sbjct: 551 KL-HSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVP 609
Query: 361 GCSWILVKGRVHVFSSGDRLEPH 383
GCSWI + ++H F S D+ P+
Sbjct: 610 GCSWIEIGNQIHSFVSNDKSHPN 632
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 128/245 (52%), Gaps = 13/245 (5%)
Query: 60 CMISG-YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
C + G Y G V A +F + RD + W M+S YV N L EA +F M +
Sbjct: 206 CALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVN 265
Query: 119 PLNGTFAVLFGAMG--SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
TF+ L + ++ Y D G+Q+H + ++ ++ D+++ ++L++MYAK I D+
Sbjct: 266 GDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDAR 325
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
R+F M+ R+ ++WN+MI+G +HG +E + + + ML G PD +T ++++C +A
Sbjct: 326 RVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYAS 385
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAI 292
+ + + V+++ ++ ++S+ N L + G + A + L +P+
Sbjct: 386 AITETLQ-----VHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFK-CFELTSQPDLVT 439
Query: 293 WGALV 297
W +L+
Sbjct: 440 WTSLI 444
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 33/274 (12%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +++ Y++ + E A++LF+ +P+RN ++W MI S G+ D +
Sbjct: 99 NQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRA--SVGR-----------NDENES 145
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+ + Y + L+ EMM P + TF L ++ G QLH
Sbjct: 146 SGMRLCFSYFRRMLL--------EMMV----PDHITFNGLICLCTQFNDIEMGVQLHCFT 193
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
VK ++ D + +LV +YAKCG ++++ R+F +++ RD + WN M+ + EA
Sbjct: 194 VKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAF 253
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----S 263
V+ +M + D TF +L+ + L + F V+S L+ FD + +
Sbjct: 254 RVFNSMRLDVVNGDEFTFSSLLSVISDDAL---EYYDFGKQVHSLVLRQSFDSDVLVASA 310
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+IN+ ++ + DA + + N W ++
Sbjct: 311 LINMYAKSENIIDARRVFDEMSIR-NVVAWNTMI 343
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 16/173 (9%)
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI- 194
YL +G+QLH +K + L L+N ++S+Y KC E +D+ ++F + R+ +SWN MI
Sbjct: 75 YLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIR 134
Query: 195 --MGLSDHGRASE---ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
+G +D +S + + ML + PD +TF G++ C ++ G +L
Sbjct: 135 ASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQL----- 189
Query: 250 NSYGLQPGFDHY----ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ + ++ GFD +++ L + G V++A + + +W +V
Sbjct: 190 HCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCR-DLVMWNVMVS 241
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 189/364 (51%), Gaps = 5/364 (1%)
Query: 28 NSMINGYVQAGQL-EKAQELFDTVP---IRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++I+ Y + + E A+ +F+ + + W M++G + G+V A +FD MP
Sbjct: 149 NALIHFYFEGFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPK 208
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
RD ++W+SMI GYVQN + + + F M G P + A + L GR +
Sbjct: 209 RDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFV 268
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H + + + LV MYAKCG I++S +F M RD +W MI GL+ H RA
Sbjct: 269 HSTIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRA 328
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
EAL ++ + G P V F+GVL AC+ AGLV +G F MV+ YG+ P +HY
Sbjct: 329 KEALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGC 388
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+++L RAG + +A + + VEP+ +W L+ C + ++ + +L+++DP
Sbjct: 389 MVDLFARAGLIDEAVRLIETMTVEPDPVMWATLLDACEIHGF-VEMGEKIGNKLIKMDPT 447
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
+ +V L IYA + + ++ +R+ M + K G S I V+ RVH F +GDR H
Sbjct: 448 HDGHYVQLAGIYAKSRKWDDVVRVRRLMVERVPIKVAGWSLIEVEDRVHRFVAGDRDHDH 507
Query: 384 VEDI 387
DI
Sbjct: 508 SSDI 511
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 45/270 (16%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAM--GS 133
+F+S+ + +A+ S+I + ++ M F N TF L A G
Sbjct: 62 IFNSISSQTVLAFNSIIRIHAKSNSSPSNSLSLYSSMRRRFLNANQHTFTFLLHACTKGK 121
Query: 134 VAY-LDQGRQLHGMQVKTIYEYDLILENSL---------VSMYAK----------C---- 169
+ + G Q+H VK Y ++ + N+L VS YAK C
Sbjct: 122 DCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYAKRVFEEEVDEVCSDVV 181
Query: 170 ------------GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 217
GE+ D+ ++F M RD +SW+SMIMG +G+ + L + M E G
Sbjct: 182 TWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKG 241
Query: 218 LYPDTVTFLGVLTACAHAGLVDKGWELF-NSMVNSYGLQPGFDHYISIINLLGRAGKVKD 276
+ P+ + +L+A A GL+ GW F +S + S + ++++ + G +++
Sbjct: 242 IRPNESILVTMLSASAQLGLL--GWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEE 299
Query: 277 AEEFVLRLPVEPNHAIWGALVGVCGLSKTD 306
+ + + IW V +CGL+ D
Sbjct: 300 SRDLFDGM---MERDIWTWTVMICGLASHD 326
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 202/365 (55%), Gaps = 5/365 (1%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
Y+ G MD A + + + S N+MI GYV G + +A+ELFD +P RN ++ M
Sbjct: 211 YAKAGKMDRACYLFQ-QMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSLITM 269
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA--HGFSP 119
I+GY +G V A +LFD M D+D +++ +MI+ Y Q+ EA+ LF M+ P
Sbjct: 270 IAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHP 329
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T A + A + L+ R + D L +L+ +YAKCG ID +Y +F
Sbjct: 330 DKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELF 389
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ RD +++++MI G +GRAS+A+ ++E M + P+ VT+ G+LTA HAGL +
Sbjct: 390 HGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAE 449
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G+ F SM ++ G+ P DHY +++LLGRAG + +A + ++++P++PN +WGAL+
Sbjct: 450 EGYRCFISMKDN-GIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGALLLA 508
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C L + + A + ++L+ A + L IYA + + L + K + K
Sbjct: 509 CRLHD-NLKLGEIAVQHCIKLESETAGYYSLLSGIYATVGKWNDAKKLTTGVEGKKIIKI 567
Query: 360 PGCSW 364
PGCSW
Sbjct: 568 PGCSW 572
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 144/285 (50%), Gaps = 43/285 (15%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S NS+++GY++ G L++ Q FD +P+++ I+W CM+SGY AG++ +AC LF MP+R+
Sbjct: 172 SWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPERN 231
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+W +MI+GYV I EA LF M P + +++
Sbjct: 232 FASWNTMITGYVDCGSIVEARELFDAM------PRRNSVSLI------------------ 267
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
++++ Y+K G++ + +F M +D +S+N+MI + + E
Sbjct: 268 ---------------TMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKE 312
Query: 206 ALTVYETML--EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
AL ++ ML + L+PD +T V++AC+ G ++ W S +N++G+ +
Sbjct: 313 ALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEH-WRWIESQINNFGIVLDDHLATA 371
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 308
+I+L + G + A E L + + + A++ CG++ +D
Sbjct: 372 LIDLYAKCGSIDKAYELFHGLR-KRDVVAYSAMIYGCGINGRASD 415
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 123/275 (44%), Gaps = 14/275 (5%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+ + + DS +W +I + Q EA+SL+ +M G P + + + + V
Sbjct: 60 ILHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVED 119
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
G +HG K ++ + ++ +L+ +Y K G++ + ++F M ++ +SWNS++ G
Sbjct: 120 DLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSG 179
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
G E ++ E L D +++ +++ A AG +D+ LF M +
Sbjct: 180 YIKGGNLDEGQRFFD---EIPL-KDVISWNCMVSGYAKAGKMDRACYLFQQMP-----ER 230
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
F + ++I G + +A E +P + ++ + + G SK+ DV S A +
Sbjct: 231 NFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSL---ITMIAGYSKS-GDVHS-AREL 285
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
++D + + A+ YA + + E L M
Sbjct: 286 FDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVM 320
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 25/235 (10%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSM------PDRDSIAWTSMISGYVQNELIAEAIS 107
+ +W C+I + GQ +A L+ M P +++ V+++L +
Sbjct: 68 DSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLC--GLL 125
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
+ G + GF L + + R++ + + +++ NSL+S Y
Sbjct: 126 IHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKV----FDEMPDKNVVSWNSLLSGYI 181
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
K G +D+ R F + +D ISWN M+ G + G+ A +++ M E + ++
Sbjct: 182 KGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPE----RNFASWNT 237
Query: 228 VLTACAHAGLVDKGWELFNSMV--NSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
++T G + + ELF++M NS L I++I ++G V A E
Sbjct: 238 MITGYVDCGSIVEARELFDAMPRRNSVSL-------ITMIAGYSKSGDVHSAREL 285
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 2/324 (0%)
Query: 61 MISGYLSAGQVFKACDLF-DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+++ Y + A ++F D + + ++W +++S +Q + E L+ EM G P
Sbjct: 410 LLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKP 469
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ T L G + L G Q+H +K+ D+ + N L+ MYAKCG + + +F
Sbjct: 470 DSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVF 529
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ D +SW+S+I+G + G EAL ++ M G+ P+ VT+LG L+AC+H GLV+
Sbjct: 530 DSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVE 589
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+GW L+ SM +G+ P +H+ I++LL RAG + +AE F+ + ++ + W L+
Sbjct: 590 EGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAA 649
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C + + D+A R +L+LDP N+ V LCNI+A+ E+ LRK M+ GV+K
Sbjct: 650 CK-THNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKV 708
Query: 360 PGCSWILVKGRVHVFSSGDRLEPH 383
PG SWI VK + H+F S D P
Sbjct: 709 PGQSWIEVKDKFHIFFSEDSSHPQ 732
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 150/299 (50%), Gaps = 15/299 (5%)
Query: 21 NFDDQ-SLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISGYLSAGQVFKAC 75
F DQ + S+I AG ++ ++L V + + +IS Y + GQ+ A
Sbjct: 162 QFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHAS 221
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSV 134
++F +P +D I+W +MI+GY+Q EA+ LF +++ G + P F +F A S+
Sbjct: 222 NVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSL 281
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
L+ G+Q+HGM VK ++ SL MYAK G + + F + D +SWN++I
Sbjct: 282 LELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAII 341
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+D+G A+EA+ + M+ GL PD++T++ +L C +++G + ++SY +
Sbjct: 342 AAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQ-----IHSYIV 396
Query: 255 QPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADV 309
+ GFD I++ N L + + DA + N W A++ C K + +
Sbjct: 397 KIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGET 455
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 144/289 (49%), Gaps = 7/289 (2%)
Query: 15 LEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNK----IAWTCMISGYLSAGQ 70
L+ + ++F+ + S++ L+ A+++ D V N I MI+ Y G
Sbjct: 56 LKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGS 115
Query: 71 VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
+ A +FD+M + ++WTSMISGY QN +AI ++ +M G P TF + A
Sbjct: 116 MKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKA 175
Query: 131 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 190
+D GRQLH +K+ + + L +N+L+SMY G+I+ + +F+ + +D ISW
Sbjct: 176 CYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISW 235
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLY-PDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
+MI G G EAL ++ +L G Y P+ F V +AC+ ++ G ++ + M
Sbjct: 236 GTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQV-HGMC 294
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+GL+ S+ ++ + G + A+ ++ P+ W A++
Sbjct: 295 VKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK-NPDIVSWNAIIA 342
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 222/429 (51%), Gaps = 44/429 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG--QLEKAQELFDTVPIRNKIAW 58
MY+ GL+ A +G + + S +++NGYV+ G +A +F + ++ +A
Sbjct: 306 MYAKCGLVQEARKVFDG-MREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAP 364
Query: 59 TC----------------------------------------MISGYLSAGQVFKACDLF 78
C ++S Y +G++ A F
Sbjct: 365 NCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCF 424
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
D + +++ ++ T + V++ + L E+ G + T+A L + +
Sbjct: 425 DVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIG 484
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
+G Q+H M VK + DL + N+L+SMY+KCG + + ++F++M + I+W S+I G +
Sbjct: 485 KGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFA 544
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
HG AS+AL ++ MLE G+ P+ VT++ VL+AC+H GL+D+ W+ F SM +++G+ P
Sbjct: 545 KHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRM 604
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+HY +++LLGR+G + +A EF+ +P + + +W +G C + + + + A K +L
Sbjct: 605 EHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHR-NTKLGEHAAKMIL 663
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
E +P + ++ L N+YA R ++ ++RK M+ K + K G SWI V+ +VH F GD
Sbjct: 664 EREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGD 723
Query: 379 RLEPHVEDI 387
L P + I
Sbjct: 724 TLHPKAQQI 732
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVA 135
+FD M +++ + WT MI+ Q EAI LF EM+ + G+ P T L +
Sbjct: 217 VFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQ 276
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+L G++LH +++ DL + SLV MYAKCG + ++ ++F M + +SW +++
Sbjct: 277 FLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVN 336
Query: 196 GL--SDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACA 233
G G EA+ ++ M L+ G+ P+ TF GVL ACA
Sbjct: 337 GYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACA 377
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
S+++ Y + G +++A+++FD + N ++WT +++GY+ G
Sbjct: 302 SLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGG------------------- 342
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
GY + EA+ +F M+ G +P TF+ + A S+ D G Q+HG
Sbjct: 343 -----GGYER-----EAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQT 392
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM-IMGLSDHGRASEA 206
+K + N LVS+YAK G ++ + + F + ++ +S + + D SE
Sbjct: 393 IKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ 452
Query: 207 LTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
E +E+ G + T+ +L+ A G + KG E ++MV G + ++I
Sbjct: 453 DLDRE--VEYVGSGVSSFTYASLLSGAACIGTIGKG-EQIHAMVVKIGFRTDLSVNNALI 509
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
++ + G K+A V + N W +++
Sbjct: 510 SMYSKCGN-KEAALQVFNDMEDCNVITWTSII 540
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGL 197
G+ LH + D +L NSL+++Y+K + ++ IF +M + RD +S++S+I
Sbjct: 71 GKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCF 130
Query: 198 SDHGRASEALTVYET-MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+++ +A+ +++ +L+ G+YP+ F V+ AC G G LF + L+
Sbjct: 131 ANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLF-----GFVLKT 185
Query: 257 G-FDHYISI 264
G FD ++ +
Sbjct: 186 GYFDSHVCV 194
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 194/362 (53%), Gaps = 3/362 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+++ Y + A ++F++ N+++W +I ++ G KA F P+++ +
Sbjct: 243 NSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIV 302
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+WTSMI GY +N A+SLF +M + F + + A S+A L G+ +H
Sbjct: 303 SWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCI 362
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ + L + NSL++MYAKCG+I+ S + +D +SWNSM+ +GR +EA+
Sbjct: 363 IHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAI 422
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++ M+ G+ PD VTF G+L C+H GL+D+G+ F SM YGL G DH ++++
Sbjct: 423 CMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDM 482
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGA--LVGVCGLSKTDADVASRATKRLLELDPLNA 325
LGR G V +A+ + L+G C + D S + + L+P
Sbjct: 483 LGRGGYVAEAQSLARKYSKTSRDKTNSCEVLLGACH-AHGDLGTGSSVGEYVKNLEPKKE 541
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVE 385
G+V L N+Y A+ + E +RKEM +GV+K PGCSWI ++ V F SG+ L P +
Sbjct: 542 VGYVLLSNMYCASGKWKEAEMVRKEMMDQGVKKVPGCSWIEIRNVVTAFVSGNNLYPCMA 601
Query: 386 DI 387
DI
Sbjct: 602 DI 603
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 138/311 (44%), Gaps = 41/311 (13%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I+ Y + A+++FD + N++ W ++ Y + + A ++F SMP++ I
Sbjct: 111 NALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEI 170
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
AW +I+ + + + + LF EM + + P TF+ L A G +H
Sbjct: 171 AWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFV 230
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN---------------- 191
+K+ + + + NS+VS YAK D+ ++F++ +++SWN
Sbjct: 231 IKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKAL 290
Query: 192 ---------------SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
SMI+G + +G AL+++ M D + VL ACA
Sbjct: 291 LAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLA 350
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
++ G MV+S + G D Y+ S+IN+ + G + + + LR + +
Sbjct: 351 ILVHG-----KMVHSCIIHLGLDKYLFVGNSLINMYAKCGDI-EGSKLALRGINDKDLVS 404
Query: 293 WGALVGVCGLS 303
W +++ GL+
Sbjct: 405 WNSMLFAFGLN 415
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 10/192 (5%)
Query: 68 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAV 126
+G++ A LFD MP+RD++AW +M++ Y + L + LF M S P N +++
Sbjct: 18 SGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSA 77
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
+ + + G +LH + V + Y+ L + N+L+ MY KC +D+ ++F M Y +
Sbjct: 78 AINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSN 137
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA--GLVDKGWEL 244
+++W S++ ++ R A ++ +M P+ V + AHA G V+ L
Sbjct: 138 EVTWCSLLFAYANTCRFDMAFEIFRSM------PEKVEIAWNIIIAAHARCGEVEACLHL 191
Query: 245 FNSMVNSYGLQP 256
F M + QP
Sbjct: 192 FKEMCENL-YQP 202
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 186/335 (55%), Gaps = 1/335 (0%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
RN T ++ Y G + +A +FD M ++D + W++MI GY N L EAI LF EM
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEM 297
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
P + S+ L+ G G+ + + +L SL+ YAKCG +
Sbjct: 298 RKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSM 357
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+++ ++ M +D++ +N++I GL+ +G+ A V+ M +FG+ P+ TF+G+L C
Sbjct: 358 EEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGC 417
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
HAGLVD G FNSM + + + P +HY +++LL RAG + +A + +P++ N +
Sbjct: 418 THAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIV 477
Query: 293 WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
WG+L+G C L + + +A K+L+EL+P N+ +V L NIY+A+ R E +R +
Sbjct: 478 WGSLLGGCRLHR-ETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVN 536
Query: 353 IKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
KG++K PG SW+ V G VH F GD P + I
Sbjct: 537 EKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKI 571
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 77 LFDSMP-DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+F P + ++ + +MI G V + A+ L+ M P + TF+ + A +
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
G +H + KT ++ D+ ++ ++V Y+KCG + D++++F +M ++ +SW MI
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G + G+ EA+ ++ +LE GL PD + VL ACA G ++ G + + GL
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESG-RWIDRCMRECGLS 237
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
S++++ + G +++A FV VE + W A++
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEA-RFVFDGMVEKDIVCWSAMI 278
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G + A +FD M ++ ++WT MI G ++ EA+ LF ++ G
Sbjct: 143 TNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLR 202
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + A + L+ GR + + ++ + SLV MY KCG ++++ +
Sbjct: 203 PDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFV 262
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M +D + W++MI G + +G EA+ ++ M + + PD +G L++CA G +
Sbjct: 263 FDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGAL 322
Query: 239 DKG 241
+ G
Sbjct: 323 ELG 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 113/305 (37%), Gaps = 54/305 (17%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF---DTVPIR---- 53
MY+ G M+ A +G + D ++MI GY G +A ELF V +R
Sbjct: 249 MYTKCGSMEEARFVFDGMVEK-DIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCY 307
Query: 54 --------------------------------NKIAWTCMISGYLSAGQVFKACDLFDSM 81
N + T +I Y G + +A ++ M
Sbjct: 308 AMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMM 367
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
++D + + ++ISG + A +FG+M G P TF L +D GR
Sbjct: 368 KEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR 427
Query: 142 QL-----HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIM 195
H V E+ +V + A+ G +D+++ + M + + I W S++
Sbjct: 428 HYFNSMSHDFSVTPTIEH----YGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLG 483
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G H A V + ++E L P +L+ A E S VN G+Q
Sbjct: 484 GCRLHRETQLAEHVLKQLIE--LEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQ 541
Query: 256 --PGF 258
PG+
Sbjct: 542 KLPGY 546
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 187/326 (57%), Gaps = 2/326 (0%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+ +I Y G V A +FD + RD++ W SM++ Y QN E+ISL EM
Sbjct: 181 RDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREM 240
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
A+G P T + + VA L GR++HG + ++ + ++ +L+ MYAKCG +
Sbjct: 241 AANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSV 300
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+ +F + + +SWN++I G + HG A AL +++ M + PD +TF+GVL AC
Sbjct: 301 KVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAAC 359
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
+ L+D+G L+N MV YG+ P HY +I+LLG G++ +A + + + V+P+ +
Sbjct: 360 SRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGV 419
Query: 293 WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
WGAL+ C + + ++A A ++L+EL+P ++ +V L N+YA + + + LR+ M
Sbjct: 420 WGALLNSCKI-HGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMI 478
Query: 353 IKGVRKAPGCSWILVKGRVHVFSSGD 378
K ++K CSWI VK +V+ F +GD
Sbjct: 479 DKRIKKNIACSWIEVKNKVYAFLAGD 504
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 20/289 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y + + A +LFD +P ++ W +I GY N AI L+ +M+ +G
Sbjct: 86 TKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLR 145
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P N T + A +++ + +GR +H +K+ +E DL + +L+ MYAKCG + D+ R+
Sbjct: 146 PDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRV 205
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + RD + WNSM+ + +G E++++ M G+ P T + V+++ A +
Sbjct: 206 FDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACL 265
Query: 239 DKGWELFNSMVNSYGLQPGFDH----YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
G E ++ +G + GF ++I++ + G VK A RL E W
Sbjct: 266 PYGRE-----IHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLR-EKRVVSWN 319
Query: 295 ALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 340
A++ + GL+ D+ + K + P H+ + AA R
Sbjct: 320 AIITGYAMHGLAVGALDLFDKMRKE-------DRPDHITFVGVLAACSR 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L+ G+QLH Y+ L LV +YA + ++ +F + ++ WN +I G
Sbjct: 63 LNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRG 122
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ +G A+ +Y ML++GL PD T VL AC+ + +G ++ Y ++
Sbjct: 123 YAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG-----RSIHEYVIKS 177
Query: 257 GFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G++ + ++I++ + G V DA ++ V + +W +++
Sbjct: 178 GWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLA 222
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 46/206 (22%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
+D+ ++I+ Y + G ++ A LF+ + + ++W +I+GY G A DLFD M
Sbjct: 283 NDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMR 342
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D P + TF + A LD+GR
Sbjct: 343 KED--------------------------------RPDHITFVGVLAACSRGRLLDEGRA 370
Query: 143 LHGMQVK------TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIM 195
L+ + V+ T+ Y ++ + CG++D++Y + NM+ + D W +++
Sbjct: 371 LYNLMVRDYGITPTVQHY-----TCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLN 425
Query: 196 GLSDHGRASEALTVYETMLEFGLYPD 221
HG A E ++E L PD
Sbjct: 426 SCKIHGNVELAELALEKLIE--LEPD 449
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 184/322 (57%), Gaps = 6/322 (1%)
Query: 20 NNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 79
N+ D ++S+IN + + G + A+++FD RN + WT ++SGY S G V + D+FD
Sbjct: 136 NSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFD 195
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM----AHGFSPLNGTFAV-LFGAMGSV 134
MP R+ + ++M+SGYV+N +E + LF E+ NG V + A +
Sbjct: 196 KMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVM 255
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
++G+ +H + EYDL L +L+ YAKCG + D+ ++F M +D +W++MI
Sbjct: 256 GAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMI 315
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+GL+ +G AL ++E M + G P+ VTF+GVLTAC H L + LF M Y +
Sbjct: 316 LGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNI 375
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
P +HY I+++L R+G+VK A F+ + +EP+ AIWG+L+ C L ++ +
Sbjct: 376 TPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGC-LMHGHYELGQKVG 434
Query: 315 KRLLELDPLNAPGHVALCNIYA 336
K L+E DP ++ +V L N+YA
Sbjct: 435 KYLIEFDPEHSGRYVLLANMYA 456
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 116/257 (45%), Gaps = 41/257 (15%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF MP+ + + S+I+ Y N +++S+F +M+ P + TF L + +++
Sbjct: 64 LFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSS 123
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L+ Q+ + +K+ D+ +S++++++K G I + ++F + R+ + W S++ G
Sbjct: 124 LE---QVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSG 180
Query: 197 LSDHGRASEALTVYETMLEFGLYPDT-------------------------------VTF 225
G +E V++ M + ++ V F
Sbjct: 181 YCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKF 240
Query: 226 LG-----VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
G VL AC G ++G + +S V GL+ + ++I+ + G VKDAE+
Sbjct: 241 NGALLVSVLNACTVMGAFEEG-KWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKV 299
Query: 281 VLRLPVEPNHAIWGALV 297
++ V+ + A W A++
Sbjct: 300 FDKMLVK-DVATWSAMI 315
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 185/324 (57%), Gaps = 9/324 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH----G 116
+I Y G + A ++FD MP R+ ++W+ +I GYVQ E++ LF + G
Sbjct: 162 VIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEG 221
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
+ T + + G L GR +HG+ KT ++ + +SL+S+Y+KCG ++++Y
Sbjct: 222 VNDF--TLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAY 279
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHA 235
+F + R+ WN+M++ + H + +++ M G + + +TFL VL AC+HA
Sbjct: 280 DVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHA 339
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
GLV+KG F ++ YG++PG HY ++++LLGRAGK+ DA + + +P+EP ++WGA
Sbjct: 340 GLVEKGKYYFE-LMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGA 398
Query: 296 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
L+ C L + +AS R+ EL +++ HV L N YAA R E RK MR +G
Sbjct: 399 LLTGCRL-HGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRG 457
Query: 356 VRKAPGCSWILVKGRVHVFSSGDR 379
++K G SW+ R+H F++GDR
Sbjct: 458 IKKETGLSWVEEGNRIHTFAAGDR 481
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 13/284 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + + +F P + + W+S+IS + QN+L +++ F M+ G P
Sbjct: 61 LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ F + G ++ L + LH +KT Y D+ + +S++ MYAKCG+I ++ +F
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAGLV 238
M YR+ +SW+ +I G G E+L +++ L E + T VL C + L+
Sbjct: 181 EMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLL 240
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
G +++ + FD S+I+L + G V++A + + V N +W
Sbjct: 241 QMG-----RLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWN 294
Query: 295 ALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN 338
A++ C D ++ + + A LC +YA +
Sbjct: 295 AMLIACA-QHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACS 337
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 184/317 (58%), Gaps = 3/317 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N I T ++ Y G + A +LF+ MP+R+ +AW MI+ Y Q E EA+ LF M+
Sbjct: 249 NVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYML 308
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
A+GF P TF + L G +H +K+ D+ L +L+ MYAK GE+
Sbjct: 309 ANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELG 368
Query: 174 DSYRIFSN-MAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTA 231
+ +IF+N + +D + W SMI L+ HG +EAL++++ M E L PD +T++GVL A
Sbjct: 369 SAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFA 428
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C+H GLV++ + FN M SYG+ P +HY +++LL RAG ++AE+ + + + PN A
Sbjct: 429 CSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIA 488
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
IWGAL+ C + + + VAS+ RL EL+P+ + + L NIYA + + E+ RK M
Sbjct: 489 IWGALLNGCQIHE-NIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEEVNRTRKMM 547
Query: 352 RIKGVRKAPGCSWILVK 368
+ K + K G S + +K
Sbjct: 548 KHKRIAKTIGHSSVEMK 564
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 16/251 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ Y+ + +FD +P + +AWT +I+GYV N+ EA+ +F EM G
Sbjct: 146 TGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVE 205
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-------YDLILENSLVSMYAKCGE 171
T A +D GR +H K Y+ ++IL ++V MYAKCG
Sbjct: 206 ANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGW 265
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
++ + +F+ M R+ ++WN MI + + R +EAL ++ ML G PD TFL VL+
Sbjct: 266 LNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSV 325
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVE 287
CA ++ G V++Y L+ I +++++ + G++ A++ +
Sbjct: 326 CARRCVLALG-----ETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEK 380
Query: 288 PNHAIWGALVG 298
+ +W +++
Sbjct: 381 KDVVMWTSMIN 391
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF + + + SMI GY ++ ++ L+ +M+ +G+SP + TF + A +
Sbjct: 63 LFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYD 122
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
G+ +H +K+ +E ++ + L++MY +C ++ ++F + + ++W +I G
Sbjct: 123 QVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLING 182
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQ 255
+ + EAL V++ M +G+ + VT + L ACA VD G W V+ +
Sbjct: 183 YVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRW------VHERVCK 236
Query: 256 PGFDHYI-----------SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G+D ++ +I+ + + G + A E ++P E N W ++
Sbjct: 237 AGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMP-ERNIVAWNCMIN 289
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 189/337 (56%), Gaps = 5/337 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ KA DLF+ MP +D IAW + SGY N ++ E++ +F M++ G
Sbjct: 319 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 378
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + + L Q LH +K +E + + SL+ +YAKC I+D+ ++
Sbjct: 379 PDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKV 438
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGL 237
F M Y+D ++W+S+I HG+ EAL ++ M P+ VTF+ +L+AC+H+GL
Sbjct: 439 FKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGL 498
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G +F+ MVN Y L+P +HY +++LLGR G++ A + + +P++ IWGAL+
Sbjct: 499 IKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALL 558
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + + + + A K L LDP +A ++ L NIY+ ++ T LR+ ++ K +
Sbjct: 559 GACRIHQ-NIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 617
Query: 358 KAPGCSWILVKGRVHVFSSGDRLE---PHVEDILLQI 391
K G S + +K V F +GDR+ H+ +IL ++
Sbjct: 618 KIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKL 654
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 120/242 (49%), Gaps = 10/242 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +LF M D+D I+W++M++ Y N + + LF EM+ P T
Sbjct: 224 YGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTV 283
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A ++ L++G ++H + V +E + + +L+ MY KC + + +F+ M
Sbjct: 284 VSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK 343
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D I+W + G +D+G E++ V+ ML G PD + + +LT + G++ +
Sbjct: 344 KDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA--- 400
Query: 245 FNSMVNSYGLQPGFD--HYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
++++ ++ GF+ +I S+I + + ++DA + V + + W +++
Sbjct: 401 --VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK-VFKGMTYKDVVTWSSIIAAY 457
Query: 301 GL 302
G
Sbjct: 458 GF 459
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
+ +I Y GQ+ A +F P D + WTS+ISGY Q+ A++ F M+ +
Sbjct: 116 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKV 175
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T + A ++ GR +HG + + L L NSL+ +Y K G I ++
Sbjct: 176 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN 235
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M+ +D ISW++M+ +D+G ++ L ++ ML+ + P+ VT + VL ACA
Sbjct: 236 LFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISN 295
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+++G ++ VN YG + +++++ + + A + R+P
Sbjct: 296 LEEGMKIHELAVN-YGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 29/287 (10%)
Query: 24 DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
++S + +I +Q + A +LF P R W ++ Y G+ + LF M +
Sbjct: 6 EESFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNN 65
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
S++ I E P N + ++ + + L G+ +
Sbjct: 66 VSSVS-------------IEE-------------RPDNYSVSIALKSCAGLRKLLLGKVI 99
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
HG K + D+ + ++L+ +Y KCG+++D+ ++F D + W S+I G G
Sbjct: 100 HGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSP 159
Query: 204 SEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
AL + M + + PD VT + V +ACA G + + V GL
Sbjct: 160 ELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSV-HGFVKRKGLDNKLCLAN 218
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADV 309
S+++L G+ G +K+A + R + + W +V + + DV
Sbjct: 219 SLLHLYGKTGSIKNASN-LFREMSDKDIISWSTMVACYADNGAETDV 264
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 189/337 (56%), Gaps = 5/337 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ KA DLF+ MP +D IAW + SGY N ++ E++ +F M++ G
Sbjct: 319 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 378
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + + L Q LH +K +E + + SL+ +YAKC I+D+ ++
Sbjct: 379 PDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKV 438
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGL 237
F M Y+D ++W+S+I HG+ EAL ++ M P+ VTF+ +L+AC+H+GL
Sbjct: 439 FKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGL 498
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G +F+ MVN Y L+P +HY +++LLGR G++ A + + +P++ IWGAL+
Sbjct: 499 IKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALL 558
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + + + + A K L LDP +A ++ L NIY+ ++ T LR+ ++ K +
Sbjct: 559 GACRIHQ-NIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 617
Query: 358 KAPGCSWILVKGRVHVFSSGDRLE---PHVEDILLQI 391
K G S + +K V F +GDR+ H+ +IL ++
Sbjct: 618 KIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKL 654
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 120/242 (49%), Gaps = 10/242 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +LF M D+D I+W++M++ Y N + + LF EM+ P T
Sbjct: 224 YGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTV 283
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A ++ L++G ++H + V +E + + +L+ MY KC + + +F+ M
Sbjct: 284 VSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK 343
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D I+W + G +D+G E++ V+ ML G PD + + +LT + G++ +
Sbjct: 344 KDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA--- 400
Query: 245 FNSMVNSYGLQPGFD--HYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
++++ ++ GF+ +I S+I + + ++DA + V + + W +++
Sbjct: 401 --VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK-VFKGMTYKDVVTWSSIIAAY 457
Query: 301 GL 302
G
Sbjct: 458 GF 459
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
+ +I Y GQ+ A +F P D + WTS+ISGY Q+ A++ F M+ +
Sbjct: 116 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKV 175
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T + A ++ GR +HG + + L L NSL+ +Y K G I ++
Sbjct: 176 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN 235
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M+ +D ISW++M+ +D+G ++ L ++ ML+ + P+ VT + VL ACA
Sbjct: 236 LFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISN 295
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+++G ++ VN YG + +++++ + + A + R+P
Sbjct: 296 LEEGMKIHELAVN-YGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 29/287 (10%)
Query: 24 DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
++S + +I +Q + A +LF P R W ++ Y G+ + LF M +
Sbjct: 6 EESFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNN 65
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
S++ I E P N + ++ + + L G+ +
Sbjct: 66 VSSVS-------------IEE-------------RPDNYSVSIALKSCAGLRKLLLGKVI 99
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
HG K + D+ + ++L+ +Y KCG+++D+ ++F D + W S+I G G
Sbjct: 100 HGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSP 159
Query: 204 SEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
AL + M + + PD VT + V +ACA G + + V GL
Sbjct: 160 ELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSV-HGFVKRKGLDNKLCLAN 218
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADV 309
S+++L G+ G +K+A + R + + W +V + + DV
Sbjct: 219 SLLHLYGKTGSIKNASN-LFREMSDKDIISWSTMVACYADNGAETDV 264
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 184/329 (55%), Gaps = 2/329 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y + + A +F + DR ++W++MI GY ++ EA+SLF EM G
Sbjct: 359 LVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVD 418
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ A + L LHG +KT + L+ SL++ YAKCG I+ + ++F+
Sbjct: 419 LVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFN 478
Query: 181 --NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
+ +D ++WNSMI S+HG + +Y + + PD VTFLG+LTAC ++GLV
Sbjct: 479 EEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLV 538
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
DKG E+F MV+ YG QP +H +++LLGRAGK+ +A + + + + ++G L+
Sbjct: 539 DKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLS 598
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + + D A A ++L++++P N +V L NI+AA + + +R +R +G++K
Sbjct: 599 ACKMHGLETDFAELAAEKLIKMEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKK 658
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PGCSW+++ G+ H F D P EDI
Sbjct: 659 TPGCSWVVLDGQFHEFRVADHSHPRSEDI 687
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 9/226 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++S Y + A +F+ MP++D + W MIS Y + E++ L M+ G
Sbjct: 256 TALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIR 315
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T ++ + ++ G+QLH ++ +Y + + NSLV MY+ C +++ + +I
Sbjct: 316 PDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKI 375
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + R +SW++MI G + H EAL+++ M G D V + +L A A G +
Sbjct: 376 FGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGAL 435
Query: 239 DKGWELFNSMVNSYGLQPGFDHY----ISIINLLGRAGKVKDAEEF 280
+ ++ Y L+ D S++N + G ++ A +
Sbjct: 436 H-----YVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKL 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 79 DSMPDRDSIA----WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
+ + +R S+ W ++I ++ I E+ LF M P + T L A
Sbjct: 171 NGLVERKSVTKLNFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVES 230
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
L G+ LH + V + +L + +L+SMYAK + D+ +F M +D + WN MI
Sbjct: 231 NSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMI 290
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
S G E+L + M+ G+ PD T + +++ ++ G +L ++ +
Sbjct: 291 SVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRN--- 347
Query: 255 QPGFDHYISIINLL 268
G D+ +S+ N L
Sbjct: 348 --GSDYQVSVHNSL 359
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 198/349 (56%), Gaps = 10/349 (2%)
Query: 41 EKAQE--LFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ 98
EKA++ L V + NK +I Y + KA ++F S+ D++ I+WTS+I G
Sbjct: 426 EKAKKTGLIFYVIVANK-----LIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRI 480
Query: 99 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 158
N +A+ F EMM P T + A + G+++H ++T D +
Sbjct: 481 NNRCYDALFFFKEMMRRQ-KPNWVTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYM 539
Query: 159 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
N+++ MY +CG ++ +++ F ++ +D +WN ++ G ++ G+ + A ++ MLE +
Sbjct: 540 PNAVLDMYVRCGRMEYAWKQFFSID-QDVSTWNILLTGYAERGKGTLATELFRRMLESNV 598
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
P+ VTF+ +L AC+ +G+V +G E ++SM Y ++P HY +++LLGRAGK++DA
Sbjct: 599 VPNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKPNLKHYACVVDLLGRAGKLEDAY 658
Query: 279 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN 338
EF+ ++P++P+ A+WGAL+ C + + ++ A K + D + ++ L N+YA N
Sbjct: 659 EFIQKIPMKPDPAVWGALLNACRIHRR-VELGELAAKNIFHDDTTSVGYYILLSNLYADN 717
Query: 339 DRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+ ++ +RK MR G+ PGCSW+ KG VH F SGD P +++I
Sbjct: 718 NIWDKVAEVRKMMRQNGIIVDPGCSWVENKGTVHAFLSGDNFHPQIKEI 766
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 128/238 (53%), Gaps = 4/238 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S ++ G + A +F MP+R+ +W ++ GY + EA++L+ M+ G P
Sbjct: 140 LLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPD 199
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF + G V L +GR++H ++ +E D+ + N+L++MYAKCG+ID + +F
Sbjct: 200 VYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFD 259
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +D+ISWN+MI G ++G E LT++ M+E+ + PD +T V+TAC G
Sbjct: 260 KMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERL 319
Query: 241 GWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G E+ M + P Y S+I + G V++AE+ + + +W A++
Sbjct: 320 GREIHGYVMRTKFSRDPSV--YNSLIQMYSSVGLVEEAEKVFSQTECR-DVVMWTAMI 374
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 158/322 (49%), Gaps = 28/322 (8%)
Query: 24 DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
D+ L I+GYV + + ++++ +I Y S G V +A +F
Sbjct: 316 DERLGREIHGYVMRTKFSRDPSVYNS-----------LIQMYSSVGLVEEAEKVFSQTEC 364
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
RD + WT+MISGY N + +A+ + M A G P T V+ A + LD G L
Sbjct: 365 RDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNL 424
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H KT + +I+ N L+ MYAKC ID + +F ++ ++ ISW S+I+GL + R
Sbjct: 425 HEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRC 484
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF--DHY 261
+AL ++ M+ P+ VT + VL+ACA G G E +++Y L+ G D Y
Sbjct: 485 YDALFFFKEMMR-RQKPNWVTLVCVLSACARIGAFTCGKE-----IHAYALRTGVSDDGY 538
Query: 262 I--SIINLLGRAGKVKDA-EEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+ +++++ R G+++ A ++F ++ + + W L+ + +A+ +R+L
Sbjct: 539 MPNAVLDMYVRCGRMEYAWKQF---FSIDQDVSTWNILLTGYA-ERGKGTLATELFRRML 594
Query: 319 ELDPLNAPGHVALCNIYAANDR 340
E + + P V +I A R
Sbjct: 595 ESNVV--PNEVTFISILCACSR 614
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
+Y+ + + + + VK L N L+SM+ K G + D++ +F M R+ SWN ++
Sbjct: 121 SYITKSKMMTHLSVK--------LGNVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLV 172
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G + G EAL +Y+ ML G+ PD TF VL C + KG E+ + V +G
Sbjct: 173 GGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREI-HVHVLRFGF 231
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
+ D ++I + + G + A ++P + + W A++ C
Sbjct: 232 ESDVDVINALITMYAKCGDIDTARLVFDKMP-KKDRISWNAMIAGC 276
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 212/413 (51%), Gaps = 49/413 (11%)
Query: 19 LNNFDDQSLNSMINGYVQAGQLEKAQELFDTVP---------------IRNKIAWTCMIS 63
+ +D S NSMI+GY + EKA LF + I A+ C
Sbjct: 276 MEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSY 335
Query: 64 GYLSAGQVFKA-------------------------CDLFDSMPDRDSIAWTSMISGYVQ 98
G GQV KA +F S+P +D+I WT MI+GY +
Sbjct: 336 GKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSK 395
Query: 99 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL---DQGRQLHGMQVKTIYEYD 155
AI F EM H ++ VL G + AYL QG +H K Y+ +
Sbjct: 396 MADGMGAIRCFSEM-HHEVHEIDDY--VLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVE 452
Query: 156 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 215
+ + SL+ MYAK G ++ +Y +FS +++ D WNSM+ G S HG +AL ++E +++
Sbjct: 453 MSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIK 512
Query: 216 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 275
GL PD VTFL +L+AC+H+ LV++G L+N M +S GL PG HY ++ LL RA ++
Sbjct: 513 QGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYM-SSIGLVPGPKHYSCMVTLLSRAALLE 571
Query: 276 DAEEFVLRLP-VEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNI 334
+AEE + + P VE N +W L+ C ++K + V RA + +L + + P + L N+
Sbjct: 572 EAEEIINKSPYVEDNVELWRTLLSACVINK-NLKVGVRAAEEVLRFNAEDGPTLILLSNL 630
Query: 335 YAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
YAA R E+ +R+ M+ + K PG SWI K +HVFSSGD+ P V+ +
Sbjct: 631 YAAAGRWDEVAEIRRNMKGLIMEKEPGLSWIEAKNDIHVFSSGDQSHPKVDQV 683
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ Y S + A +F M +RD++AW S+I GY++N+ I + + LF EMM GF+
Sbjct: 153 TSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFT 212
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P TF ++ A + GR +H + DL L+N+LV MY G+ +Y I
Sbjct: 213 PTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMI 272
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTA 231
FS M D +SWNSMI G ++ +A+ ++ + PD T+ G+++A
Sbjct: 273 FSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISA 326
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 153/343 (44%), Gaps = 53/343 (15%)
Query: 1 MYSVFGLMDYAS-NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDT---VPIRNKI 56
MYS MD +S ++ ++N D+ + NS+I GY++ ++EK LF V +
Sbjct: 158 MYS--SCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTV 215
Query: 57 AWTCMI-----------SG-------------------------YLSAGQVFKACDLFDS 80
CMI SG Y +AG A +F
Sbjct: 216 YTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSR 275
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF-SPLNGTFAVLFGAMGSVAYLDQ 139
M D ++W SMISGY +NE +A++LF ++ A F P + T+A + A G+
Sbjct: 276 MEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSY 335
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+ LHG +K + + + ++LVSMY K E + + R+F ++ +D I W MI G S
Sbjct: 336 GKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSK 395
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
A+ + M D GVL+ CA+ ++ +G +++ Y + G+D
Sbjct: 396 MADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQG-----EIIHCYAYKLGYD 450
Query: 260 HYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+S+ I++ + G + +A V P+ W +++G
Sbjct: 451 VEMSVSGSLIDMYAKNGNL-EAAYLVFSQVSHPDLKCWNSMLG 492
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGY--VQNELIAEAISLFGEMMAHGFS 118
+IS Y G + A +FD MP R +++ ++++ Y V + A +L+ +M G
Sbjct: 52 IISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLR 111
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P N T L A L G LH +K + D+ ++ SL++MY+ C ++ + +
Sbjct: 112 PSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESV 171
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
F +M RD ++WNS+I+G + + + + ++ M+ G P TF +L+AC+
Sbjct: 172 FCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACS 226
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 137 LDQGRQLHGMQVKTIY---EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
L + RQLH + + T L N+++SMY++CG ++D++++F M R +S+N++
Sbjct: 24 LQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNAL 83
Query: 194 IMGLSDHGRASE-----ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
L+ + R SE A +Y M GL P +T +L A + G + L +
Sbjct: 84 ---LAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHGDL-----LIGLL 135
Query: 249 VNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+++ L+ GF + I S++N+ + AE + E ++ W +L+
Sbjct: 136 LHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMN-ERDNVAWNSLI 187
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 189/337 (56%), Gaps = 5/337 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ KA DLF+ MP +D IAW + SGY N ++ E++ +F M++ G
Sbjct: 349 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 408
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + + L Q LH +K +E + + SL+ +YAKC I+D+ ++
Sbjct: 409 PDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKV 468
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGL 237
F M Y+D ++W+S+I HG+ EAL ++ M P+ VTF+ +L+AC+H+GL
Sbjct: 469 FKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGL 528
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G +F+ MVN Y L+P +HY +++LLGR G++ A + + +P++ IWGAL+
Sbjct: 529 IKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALL 588
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + + + + A K L LDP +A ++ L NIY+ ++ T LR+ ++ K +
Sbjct: 589 GACRIHQ-NIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 647
Query: 358 KAPGCSWILVKGRVHVFSSGDRLE---PHVEDILLQI 391
K G S + +K V F +GDR+ H+ +IL ++
Sbjct: 648 KIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKL 684
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 120/242 (49%), Gaps = 10/242 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +LF M D+D I+W++M++ Y N + + LF EM+ P T
Sbjct: 254 YGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTV 313
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A ++ L++G ++H + V +E + + +L+ MY KC + + +F+ M
Sbjct: 314 VSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK 373
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D I+W + G +D+G E++ V+ ML G PD + + +LT + G++ + L
Sbjct: 374 KDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCL 433
Query: 245 FNSMVNSYGLQPGFD--HYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
+++ ++ GF+ +I S+I + + ++DA + V + + W +++
Sbjct: 434 -----HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK-VFKGMTYKDVVTWSSIIAAY 487
Query: 301 GL 302
G
Sbjct: 488 GF 489
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
+ +I Y GQ+ A +F P D + WTS+ISGY Q+ A++ F M+ +
Sbjct: 146 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKV 205
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T + A ++ GR +HG + + L L NSL+ +Y K G I ++
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN 265
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M+ +D ISW++M+ +D+G ++ L ++ ML+ + P+ VT + VL ACA
Sbjct: 266 LFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISN 325
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+++G ++ VN YG + +++++ + + A + R+P
Sbjct: 326 LEEGMKIHELAVN-YGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-----MAHGFSP 119
Y + A LF P R W +++ Y E +SLF +M ++ P
Sbjct: 46 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 105
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
N + ++ + + L G+ +HG K + D+ + ++L+ +Y KCG+++D+ ++F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 165
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLV 238
D + W S+I G G AL + M + + PD VT + V +ACA
Sbjct: 166 MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 225
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G + + V GL S+++L G+ G +K+A + R + + W +V
Sbjct: 226 KLGRSV-HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN-LFREMSDKDIISWSTMVA 283
Query: 299 VCGLSKTDADV 309
+ + DV
Sbjct: 284 CYADNGAETDV 294
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 189/337 (56%), Gaps = 5/337 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ KA DLF+ MP +D IAW + SGY N ++ E++ +F M++ G
Sbjct: 349 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 408
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + + L Q LH +K +E + + SL+ +YAKC I+D+ ++
Sbjct: 409 PDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKV 468
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGL 237
F M Y+D ++W+S+I HG+ EAL ++ M P+ VTF+ +L+AC+H+GL
Sbjct: 469 FKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGL 528
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G +F+ MVN Y L+P +HY +++LLGR G++ A + + +P++ IWGAL+
Sbjct: 529 IKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALL 588
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + + + + A K L LDP +A ++ L NIY+ ++ T LR+ ++ K +
Sbjct: 589 GACRIHQ-NIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 647
Query: 358 KAPGCSWILVKGRVHVFSSGDRLE---PHVEDILLQI 391
K G S + +K V F +GDR+ H+ +IL ++
Sbjct: 648 KIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKL 684
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 120/242 (49%), Gaps = 10/242 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +LF M D+D I+W++M++ Y N + + LF EM+ P T
Sbjct: 254 YGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTV 313
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A ++ L++G ++H + V +E + + +L+ MY KC + + +F+ M
Sbjct: 314 VSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK 373
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D I+W + G +D+G E++ V+ ML G PD + + +LT + G++ + L
Sbjct: 374 KDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCL 433
Query: 245 FNSMVNSYGLQPGFD--HYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
+++ ++ GF+ +I S+I + + ++DA + V + + W +++
Sbjct: 434 -----HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK-VFKGMTYKDVVTWSSIIAAY 487
Query: 301 GL 302
G
Sbjct: 488 GF 489
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
+ +I Y GQ+ A +F P D + WTS+ISGY Q+ A++ F M+ +
Sbjct: 146 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKV 205
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T + A ++ GR +HG + + L L NSL+ +Y K G I ++
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN 265
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M+ +D ISW++M+ +D+G ++ L ++ ML+ + P+ VT + VL ACA
Sbjct: 266 LFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISN 325
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+++G ++ VN YG + +++++ + + A + R+P
Sbjct: 326 LEEGMKIHELAVN-YGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-----MAHGFSP 119
Y + A LF P R W +++ Y E +SLF +M ++ P
Sbjct: 46 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 105
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
N + ++ + + L G+ +HG K + D+ + ++L+ +Y KCG+++D+ ++F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 165
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLV 238
D + W S+I G G AL + M + + PD VT + V +ACA
Sbjct: 166 MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 225
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G + + V GL S+++L G+ G +K+A + R + + W +V
Sbjct: 226 KLGRSV-HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN-LFREMSDKDIISWSTMVA 283
Query: 299 VCGLSKTDADV 309
+ + DV
Sbjct: 284 CYADNGAETDV 294
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 195/341 (57%), Gaps = 6/341 (1%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+++ Y G L A ++F +P RN + W ISG + GQ+ A +FD M R ++W
Sbjct: 155 LLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSW 214
Query: 90 TSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG-MQ 147
T +I GY + +A++LF +M+ G P T +F A+ + + +HG ++
Sbjct: 215 TLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVE 274
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA--YRDKISWNSMIMGLSDHGRASE 205
+ D+ + N+L+ +YAKCG I+ + +FS M R+ +SWNS++ G + G E
Sbjct: 275 KRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVRE 334
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
A+ +E M + G+ P+ V FL +L+AC+H+GLV++G E F MVN YGL P HY +I
Sbjct: 335 AVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVI 394
Query: 266 NLLGRAGKVKDAEEFVLRLPVE-PNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LGRAG++ +AE+ L +P E N IW L+G C + + ++ R TK++LE++ +
Sbjct: 395 DMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHD-NVEIGKRVTKKILEMEKGH 453
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+V + NI+A+ R ++ LR+ + + V K PG S +
Sbjct: 454 GGDYVLMSNIFASVGRFKDVERLREMIDKRNVFKLPGYSIV 494
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 119/306 (38%), Gaps = 53/306 (17%)
Query: 77 LFDSMPDRDSIA----WTSMISGYVQNELIAEAISLFGEMM---AHGFSPLNGTFAVLFG 129
LF P +++ + ++I Y + E++ F + H S + T L
Sbjct: 63 LFHHYPFHNNLTSLLLFNNLIRSYSLSLFPHESLKFFTHTLNNLTHSLSLDSFTLTFLAH 122
Query: 130 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS 189
A ++ G LH + K +E + ++ L+ MY+ G + D+ ++F M R+ ++
Sbjct: 123 ACANLDTTHFGFHLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVFGEMPDRNTVT 182
Query: 190 WNSMIMGLSDHGRAS-------------------------------EALTVYETMLEF-G 217
WN I GL G+ +AL ++ M+E G
Sbjct: 183 WNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDG 242
Query: 218 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVK 275
+ P+ VT L V A AH G V K E + V G D I ++I+L + G ++
Sbjct: 243 IEPNEVTLLTVFPAIAHLGNV-KMCESVHGYVEKRGFN-AVDIRIVNALIDLYAKCGCIE 300
Query: 276 DAEEFVLRLP-VEPNHAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVAL 331
A +P N W +++ G+ + D + K + P HVA
Sbjct: 301 SASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVR------PNHVAF 354
Query: 332 CNIYAA 337
+I +A
Sbjct: 355 LSILSA 360
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 186/338 (55%), Gaps = 18/338 (5%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
I N + +IS Y G + A +FD M R+ ++WT++I+G+ Q + + LF
Sbjct: 140 IANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRR 199
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M P T+ L A L GR +H ++ + L +EN+L++MY+KCG
Sbjct: 200 MRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGV 259
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
I D+ IF NM +D ++WNSMI+G M G+ PD VTFLG+L++
Sbjct: 260 IVDALYIFENMVSKDVVTWNSMIVG----------------MRIMGVNPDAVTFLGILSS 303
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C H GLV +G F+SMV+ +GLQP DHY I++LLGRAG + +A +F+ +PV PN
Sbjct: 304 CRHGGLVKEGQVYFSSMVD-HGLQPELDHYSCIVDLLGRAGLLLEALDFIQNMPVCPNAV 362
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
IWG+L+ L + + RA + L L+P + + L N+YA+ ++ +R+ M
Sbjct: 363 IWGSLLSSSRL-HGNVWIGIRAAESRLSLEPGCSSTLLQLANLYASVGWWNQVARVRQLM 421
Query: 352 RIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILL 389
+ KG++ PGCSWI VK +VH F S D+ + ILL
Sbjct: 422 KDKGLKPNPGCSWIEVKNKVHRFESQDKSNSRMNGILL 459
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 10/162 (6%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G Q H + ++ + ++ + +SL+S+Y++CG + D+YR+F M+ R+ +SW ++I G +
Sbjct: 127 GIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQ 186
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
R L ++ M L P+ T+ +L+AC +G + G V+ +Q GF
Sbjct: 187 EWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGALGHG-----RGVHCQIIQMGFH 241
Query: 260 HYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
Y+ + N L + G + DA ++ V + W +++
Sbjct: 242 CYLHVENALIAMYSKCGVIVDA-LYIFENMVSKDVVTWNSMI 282
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 214/430 (49%), Gaps = 45/430 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG----------QLEKAQELFDTV 50
MYS +D + + L D S N++I+ +VQ G +++K + L D+V
Sbjct: 369 MYSRCNHVDTSLKVFDKMLER-DAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSV 427
Query: 51 P------------------------IRNKIAWTCM----ISGYLSAGQVFKACDLFDS-- 80
IR I + M I Y +G + A LF+
Sbjct: 428 TATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAELLFEQNC 487
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
DRD W ++I+GY QN L +AI L +M+ P T A + A S+ +
Sbjct: 488 SSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLA 547
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
RQLHG ++ E ++ + SL Y+KCG I + +F ++ +++ +M+M H
Sbjct: 548 RQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQH 607
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G ALT+Y++ML G+ PD VTF+ +L+AC ++GLVD+G ++F SM + ++P +H
Sbjct: 608 GMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEH 667
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNH-AIWGALVGVCGLSKTDADVASRATKRLLE 319
Y + ++LGR G+V +A EFV L + N IWG+L+G C + ++ K+LL
Sbjct: 668 YCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCR-NHGHFELGKAVAKKLLN 726
Query: 320 --LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
+D A HV L NIYA ++ +RK+M+ KG+ K GCSW+ + G V+ F S
Sbjct: 727 MGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVSR 786
Query: 378 DRLEPHVEDI 387
D P +I
Sbjct: 787 DEKHPQSSEI 796
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 163/357 (45%), Gaps = 13/357 (3%)
Query: 8 MDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQE----LFDTVPIRNKIAWTCMIS 63
+D ALE DD +L S++ Q Q++ A++ + ++P I ++
Sbjct: 309 IDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMV 368
Query: 64 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 123
Y V + +FD M +RD+++W ++IS +VQN EA+ L EM F + T
Sbjct: 369 MYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVT 428
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN-- 181
L A ++ L G+Q H ++ +++ +E+ L+ MYAK G I + +F
Sbjct: 429 ATALLSAASNLRNLYVGKQTHAYLIRRGIQFEG-MESYLIDMYAKSGSIRTAELLFEQNC 487
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+ RD+ +WN++I G + +G +A+ + + ML + P+ VT +L AC+ G +
Sbjct: 488 SSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLA 547
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---G 298
+L + + L+ S+ + + G + AE LR P E N + ++ G
Sbjct: 548 RQLHGFSIRRF-LEKNVYVGTSLTDTYSKCGAISYAENVFLRTP-EKNSVTYTTMMMCYG 605
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL-TSLRKEMRIK 354
G+ K + + + D + ++ CN D +++ S+ K +IK
Sbjct: 606 QHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIK 662
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 112/227 (49%), Gaps = 10/227 (4%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD ++++ W +MI YVQN EAI +F + + + L + +V+
Sbjct: 280 VFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDD--VTLLSVLTAVSQ 337
Query: 137 LDQ---GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
L Q Q H +K++ +I+ N+++ MY++C +D S ++F M RD +SWN++
Sbjct: 338 LQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTI 397
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I +G EAL + M + D+VT +L+A ++ + G + ++ G
Sbjct: 398 ISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRR-G 456
Query: 254 LQ-PGFDHYISIINLLGRAGKVKDAE-EFVLRLPVEPNHAIWGALVG 298
+Q G + Y +I++ ++G ++ AE F + + A W A++
Sbjct: 457 IQFEGMESY--LIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIA 501
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 21/259 (8%)
Query: 49 TVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISL 108
+ IR++++ C GQ A L DS+P ++ W S+I G++ N L +A+ L
Sbjct: 49 STSIRSRLSKLC------REGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLL 102
Query: 109 FGEMMAHG----FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL----ILEN 160
+ +M ++ F P TF+ A + G+ +H +++ + I+ N
Sbjct: 103 YAKMRSNSSCSTFDPY--TFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYN 160
Query: 161 SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
SL++MYA C + + +F M R+ ++WN++I+ R +A+ + M+ + P
Sbjct: 161 SLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMP 219
Query: 221 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAE 278
VTF+ + A + G + ++F + +G Q D ++ S I + G D
Sbjct: 220 SPVTFVNLFPALSKLG-DSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVG-CMDYA 277
Query: 279 EFVLRLPVEPNHAIWGALV 297
V + N IW ++
Sbjct: 278 RMVFDRCLNKNTEIWNTMI 296
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
++I + +++ Y S + A ++FD M R+ +AW ++I +V+ +A+ F M+
Sbjct: 155 SRIVYNSLLNMYASCQHEY-ALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMI 213
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY--DLILENSLVSMYAKCGE 171
P TF LF A+ + + +G K +Y D+ + +S + M++ G
Sbjct: 214 NQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGC 273
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF--GLYPDTVTFLGVL 229
+D + +F ++ WN+MI+ + EA+ V+ LE G+ D VT L VL
Sbjct: 274 MDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVC-DDVTLLSVL 332
Query: 230 TACAHAGLVDKGWELFNSMV 249
TA + + K E F++ V
Sbjct: 333 TAVSQLQQI-KLAEQFHAFV 351
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 188/309 (60%), Gaps = 6/309 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ GY +G + A +FD +P ++ WT+MI GY QN EA+ LF M+ GF P
Sbjct: 180 LVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPN 239
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T A + L+ G ++H M+VK + E +IL +LV MYAK G+I + ++F
Sbjct: 240 GATLASVLSVCARSGCLELGERIHEFMRVKGV-EVGVILGTALVYMYAKNGDILTARKLF 298
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTACAHAGLV 238
M R+ ++WN+MI GL+ HG +AL ++E M E + P+ VTF+GVL+AC HAGL+
Sbjct: 299 DEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLI 358
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D G E+F SM +G++P +HY +++LLGR GK+ +AEE + +P +P+ I GAL+
Sbjct: 359 DVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGALLA 418
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
+ + +VA R K++L LDP N HV+L N+YA + E++ LRK M+ + ++K
Sbjct: 419 A-SKNNGNTEVAERVVKQILTLDPHNHGVHVSLSNMYAEAGQWQEVSRLRKMMKEEKLKK 477
Query: 359 APGCSWILV 367
APG W LV
Sbjct: 478 APG--WSLV 484
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 6/236 (2%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G + A +F S+ +S W ++I + Q + ++SL+ +M HG P TF L
Sbjct: 87 GNLEHASRIFSSLHKPNSFMWNTLIRAH-QQQQPHISLSLYIQMRRHGVIPGKHTFPFLL 145
Query: 129 GAMGSVA-YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
A S++ L +Q+H VK +D + N LV Y+ G++ D+ +F + ++
Sbjct: 146 KACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNL 205
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
W +MI G + + +EAL ++E M+ G P+ T VL+ CA +G ++ G E +
Sbjct: 206 SLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELG-ERIHE 264
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
+ G++ G +++ + + G + A + +P E N W A+ +CGL+
Sbjct: 265 FMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMP-ERNVVTWNAM--ICGLA 317
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 183/324 (56%), Gaps = 2/324 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ V A LFD +P++D ++WTSMISG VQ + E++ LF EM+ GF P
Sbjct: 252 YVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVIL 311
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A S+ LD GR +H + ++D+ + SL+ MYAKCG I+ + ++F+ +
Sbjct: 312 TSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPS 371
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
++ +WN+ I GL+ +G EAL + ++E G P+ +TFL V +AC H+GLVD+G
Sbjct: 372 KNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSY 431
Query: 245 FNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
F M + Y L P +HY +++LL RA V++A E + ++P+ P+ I GAL+ +
Sbjct: 432 FKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSASS-T 490
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
+ ++ K + + + +V L N YA N + E+ S+R+ M+ KG+ KAPG S
Sbjct: 491 YGNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSS 550
Query: 364 WILVKGRVHVFSSGDRLEPHVEDI 387
I V G+ H F GD P EDI
Sbjct: 551 LIRVDGKSHKFVVGDNNHPQSEDI 574
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 129/236 (54%), Gaps = 9/236 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G A +FD MP RD ++WT +ISGY++ L +A++LF M +P TF
Sbjct: 154 YSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRM---DVAPNAATF 210
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ GA G + L+ G+ +HG+ K + +L++ N+L+ MY KC + D+ R+F +
Sbjct: 211 VSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPE 270
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D +SW SMI GL + E+L ++ ML G PD V VL+ACA GL+D G +
Sbjct: 271 KDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWV 330
Query: 245 FNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ +S + +D +I S+I++ + G ++ A++ LP + N W A +G
Sbjct: 331 HEYIDHS---RIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSK-NIRTWNAYIG 382
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
Query: 92 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 151
+ISGY AI ++ ++ +GF P T + + + + + +Q+H + VKT
Sbjct: 80 IISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTD 139
Query: 152 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 211
D+ ++NS V +Y+ CG+ + ++F M RD +SW +I G G ++A+ ++
Sbjct: 140 LWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALF- 198
Query: 212 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 271
L + P+ TF+ +L AC G ++ G + + +V+ Y +++++ +
Sbjct: 199 --LRMDVAPNAATFVSILGACGKLGCLNLG-KGIHGLVSKYPHGKELVVSNTLMDMYVKC 255
Query: 272 GKVKDAEEFVLRLPVEPNHAIWGALV 297
V DA+ +P E + W +++
Sbjct: 256 ESVTDAKRLFDEIP-EKDIVSWTSMI 280
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 201/363 (55%), Gaps = 3/363 (0%)
Query: 24 DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
D N++I+ Y++ G+ E A ++FD++ + + W +I+G + G++ A +F MP+
Sbjct: 369 DNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPE 428
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
+ ++W +MI VQ + EAI L EM G T + A G + LD + +
Sbjct: 429 SNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWI 488
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
+ K D+ L +LV M+++CG+ ++ R+F NM RD +W + I + G A
Sbjct: 489 YTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNA 548
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
A+ +++ ML+ + D F+ +LTA +H G VD+G +LF +M +G+ P HY
Sbjct: 549 KGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGC 608
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+++LLGRAG +++A + + +P++PN IWG+ + C K + + A+ A +++ +L P
Sbjct: 609 MVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHK-NVEFANYADEKITQLAPE 667
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
HV L NIYA+ + ++ +R +M+ KG +K G S I V G + F+SGD E H
Sbjct: 668 KVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGD--ESH 725
Query: 384 VED 386
E+
Sbjct: 726 TEN 728
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y + G+V +FD M +R+ ++WTS+I+GY + EA+ LF EM+ G P
Sbjct: 173 LIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPN 232
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T A + L+ G+++ + + + + ++ N+L+ MY KCG++ IF
Sbjct: 233 PVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFD 292
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+ ++ + +N+++ HG A E L V + ML+ G PD VT L + ACA G
Sbjct: 293 EFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLG 348
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 91 SMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
++I GY + L EAI ++ M+ G P N TF L A + +G Q+HG+ VK
Sbjct: 101 TLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVK 160
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
DL + NSL+ YA CG++D ++F M R+ +SW S+I G S A EA+ +
Sbjct: 161 MGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCL 220
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
+ M+E G+ P+ VT + ++ACA ++ G ++ N M
Sbjct: 221 FFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLM 259
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + ++ Y+ G ++ ++FD D++ + + +++S YVQ+ L E + + EM+
Sbjct: 267 NTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEML 326
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P T A + L G+ H + E + N+++ MY KCG+ +
Sbjct: 327 QKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKRE 386
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ ++F +M+ + ++WNS+I GL G AL ++ M E L V++ ++ A
Sbjct: 387 AACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNL----VSWNTMIGAMV 442
Query: 234 HAGLVDKGWELFNSMVNS 251
A + ++ +L M N
Sbjct: 443 QASMFEEAIDLLREMQNQ 460
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 199/357 (55%), Gaps = 2/357 (0%)
Query: 32 NGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTS 91
+ Y + G++E A LFD + +R+ AWT ++SGY G + A ++F MP +++ +WT+
Sbjct: 221 DAYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTA 280
Query: 92 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 151
+I GY +N + +A+ +F +M+ H P TF+ A ++A L G+Q+H ++
Sbjct: 281 LIGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNN 340
Query: 152 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGRASEALTVY 210
+ ++ +++V MYAKCG ++ + RIF+ + +D + WN+MI L+ +G EA+ +
Sbjct: 341 IRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLML 400
Query: 211 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 270
ML+ G+ P+ T + +L AC+H+GLV G + F SM N +G+ P +HY +I+LLGR
Sbjct: 401 NDMLKSGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGR 460
Query: 271 AGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVA 330
AG ++ + + + +P + +L+ VC + + V + L++ P ++ +
Sbjct: 461 AGCFVESMKDLFMIDCKPGDHVLYSLLCVCRPNGS-IGVGREVAEFLIKWQPHSSAAYGL 519
Query: 331 LCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
L +IYAA + R M + +R+ SWI ++ VH F+ D L P E +
Sbjct: 520 LSSIYAALVTWGLVDEARHIMDERRLRQDRSTSWIEIENEVHAFTVSDGLHPLKETL 576
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +I+ Y G +A+++FD + +RN +W MISGY+ G + +A +F MP++D +
Sbjct: 85 NHLIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCV 144
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +M+ GY +EA+ +G M TFA + + + RQ+HG
Sbjct: 145 SWNAMVVGYAHCGRFSEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQV 204
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
V + ++++ +S+V YAKCG+++D+ R+F +M RD +W +++ G + G A
Sbjct: 205 VVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAA 264
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++ M + +T ++ ++ A G+ K +F M+ + ++P + S +
Sbjct: 265 EMFSQMPK----KNTYSWTALIGGYARNGMAHKALGVFRKMI-MHRVRPDEFTFSSCLFA 319
Query: 268 LGRAGKVKDAEE---FVLRLPVEPNHAIWGALVGV---CGLSKT 305
+K ++ F+LR + PN + A+V + CG +T
Sbjct: 320 CATIASLKHGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSMET 363
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD-- 83
S N+MI+GYV+ G +++A+ +F +P ++ ++W M+ GY G+ +A + M
Sbjct: 114 SWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMRRVC 173
Query: 84 --RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL-DQG 140
+ + S++ V+ + + G+++ GF + + A + D
Sbjct: 174 VGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDAM 233
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
R M V+ I + +LVS YA CG++D + +FS M ++ SW ++I G + +
Sbjct: 234 RLFDDMTVRDIPAW-----TTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARN 288
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G A +AL V+ M+ + PD TF L ACA + G ++ ++ + ++P
Sbjct: 289 GMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRN-NIRPNPVV 347
Query: 261 YISIINLLGRAGKVKDAEE 279
+++++ + G ++ A
Sbjct: 348 VSAVVDMYAKCGSMETARR 366
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/376 (33%), Positives = 202/376 (53%), Gaps = 21/376 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELF------DTVPIRNKIAWTCMISGYLSAGQVFKACD 76
D S NS+I GY QAG KA ELF D+ P N I W MI+GY+ +G +A D
Sbjct: 419 DVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPP--NIITWNIMITGYMQSGAEDQALD 476
Query: 77 LFDSM-----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 131
LF S+ R++ +W S+ISG+VQ+ +A+ +F M P + T +
Sbjct: 477 LFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVC 536
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
++ + +++H V+ I +L + N L+ YAK G + S IF+ ++++D +SWN
Sbjct: 537 ANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWN 596
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
SM+ HG + AL ++ M + GL P+ TF +L A HAG+VD+G +F+ +
Sbjct: 597 SMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKD 656
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
Y ++ G +HY +++ LLGR+GK+ +A +F+ +P+EPN ++WGAL+ C + + + VA
Sbjct: 657 YLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHR-NFGVAV 715
Query: 312 RATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRV 371
A KR+LE +P N L Y+ L + K V K G SWI V
Sbjct: 716 LAGKRMLEFEPGNNITRHLLSQAYS-------LCGKFEPEGEKAVNKPIGQSWIERNNVV 768
Query: 372 HVFSSGDRLEPHVEDI 387
H F GD+ P+++ +
Sbjct: 769 HTFVVGDQSNPYLDKL 784
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 15/332 (4%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKI 56
+Y+ G MD A + ++ D + N+MI+G+ Q G++ +AQ+ FD + + +
Sbjct: 227 VYAKCGEMDCAKKIFDC-MDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLV 285
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEM 112
W +IS Y G A DL M D WTSMISG+ Q I+ A+ L EM
Sbjct: 286 TWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
G N T A A ++ L G ++H + VK ++++ NSL+ MY KCG++
Sbjct: 346 FLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDL 405
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+ IF M+ RD SWNS+I G G +A ++ M E P+ +T+ ++T
Sbjct: 406 KAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGY 465
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPN 289
+G D+ +LF S+ + + S+I+ ++G+ A + + + PN
Sbjct: 466 MQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPN 525
Query: 290 HAIWGALVGVCG---LSKTDADVASRATKRLL 318
+++ VC SK ++ A +R+L
Sbjct: 526 SVTILSILPVCANLVASKKVKEIHCFAVRRIL 557
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N T ++S Y G + A +F+ M R+ W++MI G +N+ E + LF MM
Sbjct: 116 NPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMM 175
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P + A G L+ GR +H M ++ + L NS++++YAKCGE+D
Sbjct: 176 RDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMD 235
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ +IF M RD ++WN+MI G +G +A ++ M + G+ P VT+ +++
Sbjct: 236 CAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYN 295
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
G D +L M +G+ P + S+I+ + G++ A
Sbjct: 296 QLGHCDLAIDLMRKM-EWFGIAPDVYTWTSMISGFTQKGRISHA 338
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 182/329 (55%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y + G + +A +F +M D D + W S+I+GY A F E+
Sbjct: 378 SALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHR 437
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + T + + L QG+++H ++ ++ + NSL+ MY+KCG ++ ++
Sbjct: 438 PNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKV 497
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+ M ++ I++N+MI HG + L YE M E G+ P+ VTF+ +L+AC+HAGLV
Sbjct: 498 FNQMMVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLV 557
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D+GW L+NSMVN YG++P +HY +++L+GR G + A +F+ +PV P+ + G+L+G
Sbjct: 558 DRGWLLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVTPDANVLGSLLG 617
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C L + + +L+ ++ +V L N+YA+ R +++ +R ++ KG+ K
Sbjct: 618 ACRLHNKVELADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVRSLIKDKGLEK 677
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PG SWI V + VF + P + I
Sbjct: 678 KPGSSWIQVGHSIFVFHATSIFYPELAKI 706
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 3/246 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N +I ++ + A +FD M RD WT++I G V N EA+ LF +M
Sbjct: 170 NLFVQCALIDMFVKCESLEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMR 229
Query: 114 AHGFSPLNGTFAVLFGAMGSVAY-LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
G + A + G + L G +HG +++ ++ DL + N+++ MY KCG
Sbjct: 230 LEGLKADSVIVASVLPVCGRLMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYP 289
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
D++ +FS M +RD +SW+++I G S +G E+ +Y M+ GL + + VL A
Sbjct: 290 DEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPAL 349
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
L +G E+ N ++ GL +++++ G +K+AE + R ++ + +
Sbjct: 350 GKLKLFKQGKEMHNFVLKQ-GLLTDVVVGSALVDMYANCGSIKEAES-IFRNMLDMDIMV 407
Query: 293 WGALVG 298
W +L+
Sbjct: 408 WNSLIA 413
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 10/245 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G +AC +F M RD ++W+++I+GY QN + E+ L+ M+ G +
Sbjct: 279 IIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTN 338
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + A+G + QG+++H +K D+++ ++LV MYA CG I ++ IF
Sbjct: 339 EIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIFR 398
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
NM D + WNS+I G + G A + + P+ +T + VL C G + +
Sbjct: 399 NMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQ 458
Query: 241 GWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G E ++ Y + G IS+ I++ + G ++ + ++ V+ N + +
Sbjct: 459 GKE-----IHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVK-NTITYNTM 512
Query: 297 VGVCG 301
+ CG
Sbjct: 513 ISACG 517
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 115/221 (52%), Gaps = 8/221 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y++ G A F +P + ++AW +++ + + +I + M+ HGF+P
Sbjct: 76 LVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPD 135
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
N T+ ++ A S+ ++ GR ++ + + +L ++ +L+ M+ KC ++D+ ++F
Sbjct: 136 NYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFD 195
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M RD +W ++I G +G EA+ ++ M GL D+V VL C G + +
Sbjct: 196 EMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVC---GRLME 252
Query: 241 GWELFNSMVNSYGLQPGFDH--YIS--IINLLGRAGKVKDA 277
G +L +M + L+ GFD Y+S II++ + G +A
Sbjct: 253 GLKLGMAM-HGCALRSGFDSDLYVSNAIIDMYCKCGYPDEA 292
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 195/368 (52%), Gaps = 34/368 (9%)
Query: 16 EGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKAC 75
E N + D +N++I+ Y + LE A+ +FD + +
Sbjct: 285 EHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPK---------------------- 322
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA--HGFSPLNGTFAVLFGAMGS 133
DRD + WT MI GY Q+ A+ LF EM + P + T + + +
Sbjct: 323 -------DRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCAR 375
Query: 134 VAYLDQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
++ L+ G+Q+H ++ IY L + N L+ MY+K G++D + +F +M+ R+ +SW
Sbjct: 376 LSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWT 435
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
S++ G HGR+ +A V++ M + L PD +TFL VL AC+H+G+VD+G LF M
Sbjct: 436 SLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFYRMSKD 495
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
+G+ PG +HY +++LLGRAG++ +A + + +EP +W +L+ C + ++ ++A
Sbjct: 496 FGVDPGVEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWISLLSAC-RTHSNIELAE 554
Query: 312 RATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRV 371
A K+LLEL N + L NIYA R ++ +R M+ G++K PG SW+ + +
Sbjct: 555 FAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGM 614
Query: 372 HVFSSGDR 379
F GDR
Sbjct: 615 ETFYVGDR 622
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 30/341 (8%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 84
N++++ Y + G++E A ++F+ + ++ + W M++GY G+ A LF M +
Sbjct: 154 NALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIE 213
Query: 85 -DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
D + W+S+ISGY Q EA+ +F +M P T L A SV L G++
Sbjct: 214 SDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET 273
Query: 144 HGMQVKTIYE-------YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK--ISWNSMI 194
H VK I + DL + N+L+ MYAKC ++ + +F + +D+ ++W MI
Sbjct: 274 HCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMI 333
Query: 195 MGLSDHGRASEALTVYETMLEFG--LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
G + HG A+ AL ++ M + + P+ T VL +CA ++ F +++Y
Sbjct: 334 GGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALN-----FGKQIHAY 388
Query: 253 GLQPGFDH----YIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLS 303
L+ + +++ +I++ ++G V D + V + N W +L+ G+ G S
Sbjct: 389 VLRRSLIYSDVLFVANCLIDMYSKSGDV-DTAQVVFDSMSKRNAVSWTSLLTGYGMHGRS 447
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 344
+ V K L D + + C+ DR I L
Sbjct: 448 EDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINL 488
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDR---DSIAWTSMISGYVQNELIAEAISLFG 110
N +IS Y V A +FD + R DS+ W S++S Y + A+SLF
Sbjct: 44 NVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFR 103
Query: 111 EMMAHGFSPLNGTFAV--LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 168
EM G+ L T V + G + GRQ+HG V++ D+ + N+LV MYAK
Sbjct: 104 EMTV-GYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAK 162
Query: 169 CGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
CG+++D+ ++F M ++D ++WN+M+ G S +GR +AL+++ M E + D VT+ V
Sbjct: 163 CGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSV 222
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
++ A G + ++F M +P +S+++ G + +E
Sbjct: 223 ISGYAQRGFGCEAMDVFRQMCGCR-CRPNVVTLMSLLSACASVGALLHGKE 272
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 103/189 (54%), Gaps = 14/189 (7%)
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
++P + TF +F A G ++ + G +HG ++ +E ++ + N+++SMY KC + +
Sbjct: 6 WTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHAR 65
Query: 177 RIFSNMAYR---DKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTAC 232
++F + YR D ++WNS++ S + A++++ M + +G+ PDTV + +L C
Sbjct: 66 KVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVC 125
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEP 288
+ GL L V+ + ++ G D ++ +++++ + GK++DA + R+ +
Sbjct: 126 GYLGL-----GLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFK- 179
Query: 289 NHAIWGALV 297
+ W A+V
Sbjct: 180 DVVTWNAMV 188
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 176/303 (58%), Gaps = 2/303 (0%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MY+ G +YA + ++ + + N+++ + G +E A LF+ +P+RN +W
Sbjct: 157 MYAECGCYEYARKVFD-EMSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPVRNLTSWNT 215
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
M++GY+ AGQ++ A +F M RD +W++MI G+ ++ +A F E++ P
Sbjct: 216 MLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPS 275
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + A + G+ LHG K + + + N+L+ Y+KCG +D + +F
Sbjct: 276 EVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFQ 335
Query: 181 NM-AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+M A + +SW SMI L+ HGRA EA+ V+ M E G+ PD VTF+ +L AC+H+GLV+
Sbjct: 336 HMSAEKCIVSWTSMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVE 395
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G LF+ M N YG++P +HY +++L GRA +++ A EF+ ++P+ PN IW L+G
Sbjct: 396 QGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGA 455
Query: 300 CGL 302
C +
Sbjct: 456 CSI 458
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 115/311 (36%), Gaps = 74/311 (23%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFA-VLFGAMGSV 134
LF P+ D+ + ++I + ++ F +++ H P + +FA L G
Sbjct: 67 LFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDG 126
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA--------------------------- 167
QG QLH + ++ + + +L+SMYA
Sbjct: 127 CSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVV 186
Query: 168 ----KCGEIDDSYRIFSNMAYRDKISWNSM------------------------------ 193
+CG+++ ++ +F M R+ SWN+M
Sbjct: 187 TACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWST 246
Query: 194 -IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
I+G + G +A ++ +L P V+ GVL+ACA AG + F +++ +
Sbjct: 247 MIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFE-----FGKILHGF 301
Query: 253 GLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 308
+ GF +S+ N L + G V A+ + E W +++ + AD
Sbjct: 302 MEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAM-HGRAD 360
Query: 309 VASRATKRLLE 319
A R + E
Sbjct: 361 EAIRVFHEMEE 371
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 190/328 (57%), Gaps = 3/328 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +FD M RD +W +MISG Q EAI+LF M G+ P + T
Sbjct: 130 YAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTV 189
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A + L +G +H + + ++I+ N+++ M+AKCG +D +Y +F +M+
Sbjct: 190 LGALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSC 249
Query: 185 RDK-ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
R I+WN+MIM + +G +AL + + M G PD V++LG L AC HAGLVD+G
Sbjct: 250 RKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVR 309
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
LF+ M S G++ HY S+++LLGRAG++K+A E + +P+ P+ +W +L+G C +
Sbjct: 310 LFDLMKVS-GVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACK-T 367
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
+ ++A A+K+L+E+ ++ V L N+YAA R ++ +R+ M VRK PG S
Sbjct: 368 YGNVEMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFS 427
Query: 364 WILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ V GR+H F + D+ P+ ++I ++
Sbjct: 428 YTEVDGRIHKFINYDQSHPNSKEIYAKL 455
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 22/320 (6%)
Query: 47 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 106
F P R K+ +S +G + A ++F + + + + +++ G Q+ ++I
Sbjct: 14 FQFHPSRTKLLELFSVS---PSGNLSLAGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSI 70
Query: 107 SLFGEMMA--HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 164
S + +M+ L +FA L G ++A+ + QLH ++ ++ D++L +L+
Sbjct: 71 SWYRDMLCCVQRVDALTCSFA-LKGCARALAF-SEATQLHSQVLRFGFDADVLLLTTLLD 128
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
+YAK G ID + ++F M RD SWN+MI GL+ R EA+ ++ M E G P+ VT
Sbjct: 129 VYAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVT 188
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEF 280
LG L+AC+ G + +G +V+ Y L D + ++I++ + G V A
Sbjct: 189 VLGALSACSQLGALKEG-----EIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSV 243
Query: 281 VLRLPVEPNHAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+ + W ++ + G D+ R + D ++ G + CN
Sbjct: 244 FESMSCRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGL 303
Query: 338 NDRHIELTSLRKEMRIKGVR 357
D + L L M++ GV+
Sbjct: 304 VDEGVRLFDL---MKVSGVK 320
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 211/401 (52%), Gaps = 42/401 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MY+ G + A + +G ++ D + +MI GY +AG++ A+ LFD + RN WT
Sbjct: 159 MYAKCGYVCDARDVFDGMVDR-DVVAWTAMICGYAKAGRMVDARLLFDNMGERNSFTWTT 217
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
M++GY + G + A +L+D M ++ + W +MI+GY + ++EA +F E+ PL
Sbjct: 218 MVAGYANYGDMKAAMELYDVMNGKEEVTWVAMIAGYGKLGNVSEARRIFDEIPV----PL 273
Query: 121 N-GTFAVLFGAMGS--------------------------VAYLDQGRQLHGMQVKTIYE 153
N T A L V + QL +++ +
Sbjct: 274 NPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNLLT 333
Query: 154 YDL---------ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
YD+ I+ N+L+ M +KCG ID ++R F+ M RD ++++MI ++HG++
Sbjct: 334 YDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQ 393
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
+A+ ++ M + GL P+ VTF+GVL AC+ +GL+++G F M YG++P +HY +
Sbjct: 394 DAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCM 453
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LLGRAG+++ A + + WG+L+ C + + ++ A + L E+DP +
Sbjct: 454 VDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYG-NVELGEIAARHLFEIDPTD 512
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+ +V L N YA+ND+ ++K M KG++K G SWI
Sbjct: 513 SGNYVLLANTYASNDKWERAEEVKKLMSKKGMKKPSGYSWI 553
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 11/230 (4%)
Query: 71 VFKACDLFDSMPD-RDSIAWTSMISGYVQNEL-IAEAISLFGEMMAHGFSPLNGTFAVLF 128
++ A LFD+MP+ + WTS+I ++ + IS F M G P TF+ +
Sbjct: 63 LYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVL 122
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
A G V + +G+Q+H V++ + + I++ +L+ MYAKCG + D+ +F M RD +
Sbjct: 123 NACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVV 182
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
+W +MI G + GR +A +++ M E ++ T+ ++ A+ G + EL++ M
Sbjct: 183 AWTAMICGYAKAGRMVDARLLFDNMGE----RNSFTWTTMVAGYANYGDMKAAMELYDVM 238
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ ++++I G+ G V +A +PV N + AL+
Sbjct: 239 NGKEEVT-----WVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLA 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 54/290 (18%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
NKI T ++ Y G V A D+FD M DRD +AWT+MI GY + + +A LF M
Sbjct: 149 NKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNM- 207
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-YDLILENSLVSMYAKCGEI 172
G Y + G M++ + + + ++++ Y K G +
Sbjct: 208 --------GERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMIAGYGKLGNV 259
Query: 173 DDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
++ RIF + + + +++ + +G A EA+ +YE M + V +G ++A
Sbjct: 260 SEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISA 319
Query: 232 CAH-----------------------------------AGLVDKGWELFNSMVNSYGLQP 256
CA G +D W FN M N
Sbjct: 320 CAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNR----- 374
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALVGVCGLS 303
Y ++I GK +DA + L++ E PN + ++ C S
Sbjct: 375 DLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTS 424
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 186/321 (57%), Gaps = 5/321 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+I Y G + A +F+ + +R ++ +W SM++ VQN A +F + P
Sbjct: 250 LIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEP 308
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ + + A + L+ GR +H + VK E ++ + ++LV MY KCG I+++ ++F
Sbjct: 309 TDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVF 368
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAGL 237
S + R+ ++WN+MI G + G AL ++E M G+ P VT + +L+ C+ G
Sbjct: 369 SELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGA 428
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
V++G ++F SM +YG++PG +H+ +++LLGR+G V A EF+ + ++P ++WGAL+
Sbjct: 429 VERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALL 488
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + ++ A ++L ELD +++ HV L N+ A+ R E T +RKEM+ G++
Sbjct: 489 GACRM-HGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIK 547
Query: 358 KAPGCSWILVKGRVHVFSSGD 378
K G SWI VK R+HVF + D
Sbjct: 548 KNVGYSWIAVKNRIHVFQAKD 568
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 15/282 (5%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G AC++FD MP R+ W + IS VQ+ +AI F E + P + TF
Sbjct: 153 YCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITF 212
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A + L+ GRQLH V+ Y+ D+ + N L+ Y KCG+I + +F+ +
Sbjct: 213 CAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGN 272
Query: 185 RDK-ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
R +SW SM+ L + A V+ + + P VL+ACA G G E
Sbjct: 273 RKNVVSWCSMLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELG----GLE 327
Query: 244 LFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
L S V++ ++ + I +++++ G+ G +++AE+ LP E N W A++G
Sbjct: 328 LGRS-VHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAMIG- 384
Query: 300 CGLS-KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 340
G + + D D+A R + + P +V L +I + R
Sbjct: 385 -GYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSR 425
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 9/219 (4%)
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
R + WTS+ISG V N A+ F M P + TF +F A V G+Q+
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
HG+ +K YD+ + S MY K G D+ +F M R+ +WN+ I R+
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRS 190
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A+ ++ L P+++TF L AC ++ G +L +++ ++ G+ +S
Sbjct: 191 LDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQL-----HAFIVRCGYKEDVS 245
Query: 264 I----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ I+ G+ G + AE R+ N W +++
Sbjct: 246 VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLA 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + ++ Y G + A +F +P+R+ + W +MI GY I A+ LF EM
Sbjct: 344 NIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMT 403
Query: 114 --AHGFSPLNGTFAVLFGAMGSVAYLDQGRQL-HGMQVKTIYEYDLILENSLVSMYAKCG 170
+HG P T + V +++G Q+ M++ E +V + + G
Sbjct: 404 LGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSG 463
Query: 171 EIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEF 216
+D +Y NMA + IS W +++ HG+ E + E
Sbjct: 464 LVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFEL 510
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 181/318 (56%), Gaps = 1/318 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + G + + +FD + + +A+ ++I +N EA++LF E+ G P
Sbjct: 153 LINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPT 212
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T V+ + + LD GR +H K ++ + + +L+ MYAKCG +DD+ +F
Sbjct: 213 DVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFR 272
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+M RD +W+++I+ + HG +A+++ M + + PD +TFLG+L AC+H GLV++
Sbjct: 273 DMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEE 332
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G+E F+ M N YG+ P HY +++LLGRAG++ +A +F+ LP++P +W L+ C
Sbjct: 333 GFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSAC 392
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + ++ R +R+ ELD + +V N+ A + ++ LRK M KG K P
Sbjct: 393 S-THGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIP 451
Query: 361 GCSWILVKGRVHVFSSGD 378
GCS I V VH F +G+
Sbjct: 452 GCSSIEVNNVVHEFFAGE 469
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 99 NELIAEAISLFGEMMAHGFSPLNGT------FAVLFGAMGSVAYLDQGRQLHGMQVKTIY 152
+++ I LF MA G++ LN F + V L +G+QLH VK
Sbjct: 85 DQITQPNIVLFN-TMARGYARLNDPLRMITHFRRCLRLVSKVKALAEGKQLHCFAVKLGV 143
Query: 153 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 212
++ + +L++MY CG+ID S R+F + +++N++IM L+ + RA+EAL ++
Sbjct: 144 SDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRE 203
Query: 213 MLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYI----SIINL 267
+ E GL P VT L VL++CA G +D G W ++ Y + GFD Y+ ++I++
Sbjct: 204 LQEIGLKPTDVTMLVVLSSCALLGSLDLGRW------MHEYVKKYGFDRYVKVNTTLIDM 257
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ G + DA +P A W A++
Sbjct: 258 YAKCGSLDDAVNVFRDMPKRDTQA-WSAII 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G + A ++F MP RD+ AW+++I Y + +AIS+ EM
Sbjct: 252 TTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQ 311
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQ-LHGMQ-----VKTIYEYDLILENSLVSMYAKCGEI 172
P TF + A +++G + HGM V +I Y +V + + G +
Sbjct: 312 PDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHY-----GCMVDLLGRAGRL 366
Query: 173 DDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP--DTVTFLGVL 229
D++Y+ + + I W +++ S HG V E + E D V F +
Sbjct: 367 DEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNL- 425
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQ-PG 257
CA G D L +M++ ++ PG
Sbjct: 426 --CARYGKWDDVNHLRKTMIDKGAVKIPG 452
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 187/318 (58%), Gaps = 4/318 (1%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A ++F+ + +D +++ +I GY Q +E+++LF EM G +P +F
Sbjct: 484 YSKCGHLSLARNVFN-VSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSF 542
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A ++ + QG+++HG V+ ++ L NSL+ +Y KCG ID + ++F + +
Sbjct: 543 IGIISACAHLSSIKQGKEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQH 602
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTACAHAGLVDKGWE 243
+D SWN+MI+G G A+ ++E M E G+ D+V+++ VL+AC+H GL++KG +
Sbjct: 603 KDVASWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNK 662
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
F M Y ++P HY +++LLGRAG++++A + L EP+ IWGAL+G C +
Sbjct: 663 YFKQM-QDYNIEPTHTHYACMVDLLGRAGQIEEAANLIRGLSFEPDANIWGALLGACRI- 720
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
+ ++ A + L +L P + ++ L N+YA R E +R+ M+ +G +K PGCS
Sbjct: 721 YGNVELGHWAAEHLFKLKPDHCGYYILLSNMYAEAGRWDEANMVRELMKSRGAKKNPGCS 780
Query: 364 WILVKGRVHVFSSGDRLE 381
W+ + +VH F G+++E
Sbjct: 781 WVQIGDQVHGFLVGEKIE 798
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 73 KACD-LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 131
+AC +FD M +R+ ++W ++I+G+ L +A+ F M+ G P T + + +
Sbjct: 289 EACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVL 348
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
G + G ++HG ++ E D+ + NSL+ MYAK G + IF+ M R+ +SWN
Sbjct: 349 GELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWN 408
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
SM+ + + A+ + M G P+ VTF VL ACA G ++ G E+ ++ +
Sbjct: 409 SMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQT 468
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 14/226 (6%)
Query: 79 DSMP-DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
+++P + + W ++I Y + ++ M+ G P + T+ + A
Sbjct: 92 NTLPFSKTAFLWNTLIRAYSIAGFF-DGFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKF 150
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
D+GR++HG+ K ++ D+ + N+L+ Y CG D+ +F M RDK+SWN++I
Sbjct: 151 DKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLC 210
Query: 198 SDHGRASEALTVYETMLEFG--LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
SD G E+L ++ M+ + PD VT + VL CA D + +V+ Y +
Sbjct: 211 SDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCA-----DSENVVMARIVHGYVFK 265
Query: 256 PGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G ++ + N L G+ G ++A + V E N W A++
Sbjct: 266 VGLSGHVKVGNALVDVYGKCGS-EEACKKVFDEMDERNEVSWNAVI 310
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 137/305 (44%), Gaps = 18/305 (5%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM--AHGFSPLNG 122
Y + G A ++FD M +RD ++W ++I E++ F EM+ A P
Sbjct: 179 YGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLV 238
Query: 123 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 182
T + + R +HG K + + N+LV +Y KCG + ++F M
Sbjct: 239 TVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEM 298
Query: 183 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
R+++SWN++I G S G + +AL + +M+ G+ P+ VT +L GL G
Sbjct: 299 DERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGM 358
Query: 243 ELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
E V+ Y L+ G + I S+I++ ++G + A ++ + N W ++V
Sbjct: 359 E-----VHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMG-DRNIVSWNSMVA 412
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
++ A+ R ++ N P +V N+ A R + ++ KE+ + ++
Sbjct: 413 --NFAQNRHHFAAVELLRQMQAHGEN-PNNVTFTNVLPACAR-LGFLNVGKEIHARIIQ- 467
Query: 359 APGCS 363
GC+
Sbjct: 468 -TGCA 471
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----- 82
NS+++ Y + G+++ A ++FD + ++ +W MI GY G+ A +LF++M
Sbjct: 578 NSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKEDGGV 637
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+ DS+++ +++S LI + F +M + P + +A + +G +++
Sbjct: 638 EYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIEPTHTHYACMVDLLGRAGQIEEAAN 697
Query: 143 L 143
L
Sbjct: 698 L 698
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 188/338 (55%), Gaps = 1/338 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+++++ Y + + +LF + + + I MI+ Y + G+V A ++F+SMP++ I
Sbjct: 334 STLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLI 393
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W S++ G QN +EA+ F M +FA + A + L+ G QL G
Sbjct: 394 SWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKA 453
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ E D I+ SLV Y KCG ++ ++F M D++SWN+M+MG + +G EAL
Sbjct: 454 ITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEAL 513
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
T++ M G+ P +TF G+L+AC H GLV++G +LF +M + Y + PG +HY +++L
Sbjct: 514 TLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDL 573
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
R G +A + +P + + +W +++ C +S + + A +++++LDP N+
Sbjct: 574 FARVGCFGEAMYLIEEMPFQADANMWLSVLRGC-VSHGNKTIGKMAAEKIIQLDPGNSGA 632
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
++ L NI A ++ +R+ MR K V+K PGCSW+
Sbjct: 633 YIQLSNILATSEDWEGSAEVRELMRNKNVQKIPGCSWM 670
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 26/286 (9%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
Y G +D A+ + G + DD SL+++++GY AG++ A+++FD + W +
Sbjct: 208 YGKCGDLDSAARVV-GFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSI 266
Query: 62 ISGYLSAGQVFKACDLFDSMP------DRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
ISGY+S G+ +A LF+ M D ++A IS + N + L +M H
Sbjct: 267 ISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLN------VELVKQMHDH 320
Query: 116 GFSPLNGTFAVLFGAMGSVAYL------DQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
F + T ++ + AY D + H ++V YD IL N+++++Y C
Sbjct: 321 AFK-IGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKV-----YDAILLNTMITVYCNC 374
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
G ++D+ +F++M + ISWNS+++GL+ + SEAL + M + + D +F V+
Sbjct: 375 GRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVI 434
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 275
+ACA ++ G +LF + + GL+ S+++ + G V+
Sbjct: 435 SACAIKSSLELGEQLFGKAI-TLGLESDQIICTSLVDFYCKCGLVE 479
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 118/231 (51%), Gaps = 15/231 (6%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N++I ++ G K+ ELF +P + +W ++S +G + +A LF++MP ++
Sbjct: 63 SWNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKN 122
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG------TFAVLFGAMGSVAYLDQ 139
+ W SMI GY ++ ++ LF EM PL + +FGA + LD
Sbjct: 123 PLVWNSMIHGYSRHGYPRNSLLLFKEM---NLDPLETVHRDAFVLSTVFGACADLFALDC 179
Query: 140 GRQLHGMQVKTIYEY--DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
G+Q+H +E+ D +L +S+V+ Y KCG++D + R+ + D S ++++ G
Sbjct: 180 GKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGY 239
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
++ GR S+A V++ ++ P +V + +++ G + LFN M
Sbjct: 240 ANAGRMSDARKVFDNKVD----PCSVLWNSIISGYVSNGEEMEALALFNKM 286
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 193/367 (52%), Gaps = 16/367 (4%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
N D +S++ Y + G+++KA + VP+ +L G C
Sbjct: 298 NSDGYIRSSLVEMYGKCGRMDKASTILKDVPL-----------NFLRKGNFGVTCK---- 342
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
P ++W+SM+SGYV N + + F M+ T A + A + L+ G
Sbjct: 343 EPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFG 402
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+Q+H K D + +SL+ MY+K G +DD+ IF + + + W SMI G + H
Sbjct: 403 KQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALH 462
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G+ EA++++E ML G+ P+ VTF+GVL AC+H GL+++G F M ++Y + P +H
Sbjct: 463 GQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEH 522
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y S++NL GRAG + +A+ F+ + ++W + + C L K + ++ ++ LL+
Sbjct: 523 YTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHK-NFNMGKSVSEMLLQS 581
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRL 380
P + ++ L N+ ++N + E +R M +GV+K PG SW+ +K ++H F+ GDR
Sbjct: 582 APSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRS 641
Query: 381 EPHVEDI 387
P ++I
Sbjct: 642 HPQDKEI 648
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 168/333 (50%), Gaps = 35/333 (10%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+++ Y++ + E A+ F+ + ++ ++W MI YL G V K+ ++F + P++D +
Sbjct: 173 NSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVV 232
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHG--FSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+W ++I G +Q A+ M+AHG FSP+ TF++ + S++ ++ GRQLHG
Sbjct: 233 SWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPV--TFSIALILVSSLSLVEVGRQLHG 290
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----------------DKIS 189
+ D + +SLV MY KCG +D + I ++ +S
Sbjct: 291 RVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVS 350
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
W+SM+ G +G+ + + + +M+ + D T +++ACA+AG+++ G ++ ++ +
Sbjct: 351 WSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQI-HAYI 409
Query: 250 NSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDA 307
GL+ D Y+ S+I++ ++G + DA + EPN +W +++ C L
Sbjct: 410 QKIGLR--IDAYVGSSLIDMYSKSGSLDDA-LMIFEQIKEPNVVLWTSMISGCALHGQGK 466
Query: 308 DVASRATKRL-LELDP--------LNAPGHVAL 331
+ S L L + P LNA HV L
Sbjct: 467 EAISLFEGMLNLGIIPNEVTFVGVLNACSHVGL 499
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 37/260 (14%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI-SLFGEMMAHGFSP 119
+++ Y+ + + A LFD + +++ WT +ISG+ + +E + SLF EM A G P
Sbjct: 73 LLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACP 132
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC---------- 169
T + + + G+ +H ++ D++LENS++ +Y KC
Sbjct: 133 NQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFF 192
Query: 170 ---------------------GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
G+++ S +F N +D +SWN++I GL G AL
Sbjct: 193 ELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALE 252
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIIN 266
M+ G VTF L + LV+ G +L + V ++GL D YI S++
Sbjct: 253 QLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQL-HGRVLTFGLNS--DGYIRSSLVE 309
Query: 267 LLGRAGKVKDAEEFVLRLPV 286
+ G+ G++ A + +P+
Sbjct: 310 MYGKCGRMDKASTILKDVPL 329
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
R LHG K L N L+++Y K +D ++++F + +++ +W +I G +
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 201 GRASE-ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-----WELFNSMVNSYGL 254
+SE +++ M G P+ T VL C+ + G W L N + L
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ SI++L + + + AE F L +E + W ++G
Sbjct: 172 EN------SILDLYLKCKEFEYAESF-FELMIEKDVVSWNIMIG 208
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 181/323 (56%), Gaps = 1/323 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ AG + + MP+ + +AW ++++G QN + + M G+ P TF
Sbjct: 249 YMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITF 308
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ + +A L QG+Q+H +K + + +SLVSMY+KCG + DS + F
Sbjct: 309 VSVISSCSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEE 368
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
RD + W+SMI HG+ +A+ ++ + + + VTFL +L AC+H+GL DKG +
Sbjct: 369 RDVVIWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDF 428
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
F+ MV YGL+ +HY +++LLGR+G +++AE + +PV + IW L+ C + K
Sbjct: 429 FDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHK 488
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
+ ++A R + +L +DP + +V + I+A+ R ++ +R+ M+ K V+K PG SW
Sbjct: 489 NE-EMARRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSW 547
Query: 365 ILVKGRVHVFSSGDRLEPHVEDI 387
+ VK +VH F +GD+ P +I
Sbjct: 548 VEVKNQVHQFHTGDKSHPKFVEI 570
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N ++N Y + G+L A +LFD +P RN ++ MI YL G + A +LFD M +R+
Sbjct: 111 NHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVA 170
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W +M++G V+ L EA+ LF M GF P +F + + L G Q+H
Sbjct: 171 TWNAMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYV 230
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K +E++ ++ SL MY K G + + RI M + ++WN+++ G + + L
Sbjct: 231 AKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVL 290
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
Y M G PD +TF+ V+++C+ + +G ++ ++ + G S++++
Sbjct: 291 DHYCMMKMAGYRPDKITFVSVISSCSELATLCQGKQIHAEVIKA-GASSVVSVISSLVSM 349
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+ G ++D+ + L E + IW +++ G
Sbjct: 350 YSKCGSLQDSIKAFLECE-ERDVVIWSSMIAAYGF 383
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 41/210 (19%)
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
F++L + + G+QLH + + D + N L++ Y+K GE++++ ++F M
Sbjct: 75 FSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 134
Query: 184 YRDKIS-------------------------------WNSMIMGLSDHGRASEALTVYET 212
R+ +S WN+M+ GL G EAL ++
Sbjct: 135 RRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSR 194
Query: 213 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY----ISIINLL 268
M G PD +F VL CAH + G + V++Y + GF+ S+ ++
Sbjct: 195 MNVLGFVPDEYSFGSVLRGCAHLRALFVGEQ-----VHAYVAKCGFEFNSVVGCSLAHMY 249
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+AG + + E + +P N W L+
Sbjct: 250 MKAGSLCNGERIIKWMP-NCNLVAWNTLMA 278
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 184/337 (54%), Gaps = 5/337 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ KA D F+ MP +D IAW + SGY N ++ E++ +F M++ G
Sbjct: 257 TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 316
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + + L Q H +K +E + + SL+ +YAKC I+D+ ++
Sbjct: 317 PDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKV 376
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGL 237
F M Y+D ++W+S+I HG+ EAL + M P+ VTF+ +L+AC+H+GL
Sbjct: 377 FKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGL 436
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G +F+ MVN Y L+P +HY +++LLGR G++ A + + +P++ IWGAL+
Sbjct: 437 IKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALL 496
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + + + + A K L LD +A ++ L NIY ++ T LR+ ++ K +
Sbjct: 497 GACRIHQ-NIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLN 555
Query: 358 KAPGCSWILVKGRVHVFSSGDRLE---PHVEDILLQI 391
K G S + +K V F +GDR+ H+ +IL ++
Sbjct: 556 KIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKL 592
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
+ +I Y GQ+ A ++F P D + WTS++SGY Q+ A++ F M+ +
Sbjct: 54 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 113
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T + A ++ GR +HG + + L L NSL+ +Y K G I ++
Sbjct: 114 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN 173
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M+ +D ISW++M +D+G ++ L ++ ML+ + P+ VT + VL ACA
Sbjct: 174 LFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISN 233
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+++G ++ VN YG + +++++ + + A +F R+P
Sbjct: 234 LEEGMKIHELAVN-YGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 280
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 2/238 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +LF M D+D I+W++M + Y N + + LF EM+ P T
Sbjct: 162 YGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTV 221
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A ++ L++G ++H + V +E + + +L+ MY KC + + F+ M
Sbjct: 222 VSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPK 281
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D I+W + G +D+G E++ V+ ML G PD + + +LT + G++ +
Sbjct: 282 KDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-VC 340
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
F++ V G + S+I + + ++DA + V + + W +++ G
Sbjct: 341 FHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK-VFKGMTYKDVVTWSSIIAAYGF 397
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P N + ++ + + L G+ +HG K + D+ + ++L+ +Y KCG+++D+ +
Sbjct: 13 PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEV 72
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGL 237
F D + W S++ G G AL + M + + PD VT + V +ACA
Sbjct: 73 FMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSN 132
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
G + + V GL S+++L G+ G +K+A
Sbjct: 133 FKLGRSV-HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNA 171
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 184/337 (54%), Gaps = 5/337 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ KA D F+ MP +D IAW + SGY N ++ E++ +F M++ G
Sbjct: 349 TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 408
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + + L Q H +K +E + + SL+ +YAKC I+D+ ++
Sbjct: 409 PDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKV 468
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGL 237
F M Y+D ++W+S+I HG+ EAL + M P+ VTF+ +L+AC+H+GL
Sbjct: 469 FKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGL 528
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G +F+ MVN Y L+P +HY +++LLGR G++ A + + +P++ IWGAL+
Sbjct: 529 IKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALL 588
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + + + + A K L LD +A ++ L NIY ++ T LR+ ++ K +
Sbjct: 589 GACRIHQ-NIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLN 647
Query: 358 KAPGCSWILVKGRVHVFSSGDRLE---PHVEDILLQI 391
K G S + +K V F +GDR+ H+ +IL ++
Sbjct: 648 KIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKL 684
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
+ +I Y GQ+ A ++F P D + WTS++SGY Q+ A++ F M+ +
Sbjct: 146 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 205
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T + A ++ GR +HG + + L L NSL+ +Y K G I ++
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN 265
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M+ +D ISW++M +D+G ++ L ++ ML+ + P+ VT + VL ACA
Sbjct: 266 LFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISN 325
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+++G ++ VN YG + +++++ + + A +F R+P
Sbjct: 326 LEEGMKIHELAVN-YGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 2/238 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +LF M D+D I+W++M + Y N + + LF EM+ P T
Sbjct: 254 YGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTV 313
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A ++ L++G ++H + V +E + + +L+ MY KC + + F+ M
Sbjct: 314 VSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPK 373
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D I+W + G +D+G E++ V+ ML G PD + + +LT + G++ +
Sbjct: 374 KDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-VC 432
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
F++ V G + S+I + + ++DA + V + + W +++ G
Sbjct: 433 FHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK-VFKGMTYKDVVTWSSIIAAYGF 489
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-----MAHGFSP 119
Y + A LF P + W +++ Y E +SLF +M ++ P
Sbjct: 46 YARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKP 105
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
N + ++ + + L G+ +HG K + D+ + ++L+ +Y KCG+++D+ +F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF 165
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLV 238
D + W S++ G G AL + M + + PD VT + V +ACA
Sbjct: 166 MEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 225
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
G + + V GL S+++L G+ G +K+A
Sbjct: 226 KLGRSV-HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNA 263
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 184/337 (54%), Gaps = 5/337 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ KA D F+ MP +D IAW + SGY N ++ E++ +F M++ G
Sbjct: 349 TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 408
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + + L Q H +K +E + + SL+ +YAKC I+D+ ++
Sbjct: 409 PDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKV 468
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGL 237
F M Y+D ++W+S+I HG+ EAL + M P+ VTF+ +L+AC+H+GL
Sbjct: 469 FKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGL 528
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G +F+ MVN Y L+P +HY +++LLGR G++ A + + +P++ IWGAL+
Sbjct: 529 IKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALL 588
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + + + + A K L LD +A ++ L NIY ++ T LR+ ++ K +
Sbjct: 589 GACRIHQ-NIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLN 647
Query: 358 KAPGCSWILVKGRVHVFSSGDRLE---PHVEDILLQI 391
K G S + +K V F +GDR+ H+ +IL ++
Sbjct: 648 KIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKL 684
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
+ +I Y GQ+ A ++F P D + WTS++SGY Q+ A++ F M+ +
Sbjct: 146 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 205
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T + A ++ GR +HG + + L L NSL+ +Y K G I ++
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASN 265
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M+ +D ISW++M +D+G ++ L ++ ML+ + P+ VT + VL ACA
Sbjct: 266 LFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISN 325
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+++G ++ VN YG + +++++ + + A +F R+P
Sbjct: 326 LEEGMKIHELAVN-YGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 2/238 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +LF M D+D I+W++M + Y N + + LF EM+ P T
Sbjct: 254 YGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTV 313
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A ++ L++G ++H + V +E + + +L+ MY KC + + F+ M
Sbjct: 314 VSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPK 373
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D I+W + G +D+G E++ V+ ML G PD + + +LT + G++ +
Sbjct: 374 KDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-VC 432
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
F++ V G + S+I + + ++DA + V + + W +++ G
Sbjct: 433 FHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK-VFKGMTYKDVVTWSSIIAAYGF 489
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-----MAHGFSP 119
Y + A LF P + W +++ Y E +SLF +M ++ P
Sbjct: 46 YARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKP 105
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
N + ++ + + L G+ +HG K + D+ + ++L+ +Y KCG+++D+ +F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF 165
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLV 238
D + W S++ G G AL + M + + PD VT + V +ACA
Sbjct: 166 MEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 225
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
G + + V GL S+++L G+ G +K+A
Sbjct: 226 KLGRSV-HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNA 263
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 188/329 (57%), Gaps = 2/329 (0%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
I +I+ Y G++ ACD+F+ M ++ +W+++I + E+ E + L G+M +
Sbjct: 8 IVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSE 67
Query: 116 GFSPLN-GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
G + T + A + D G+ +HG+ ++ I E +++++ SL+ MY K G ++
Sbjct: 68 GRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEK 127
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
R+F NM+ +++ S+ MI GL+ HGR EAL V+ M+E GL PD V ++GV +AC+H
Sbjct: 128 GLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSH 187
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
AGLV++G + F SM + ++P HY +++LLGR G +K+A E + + ++PN IW
Sbjct: 188 AGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWR 247
Query: 295 ALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 354
+L+ C + + ++ A + L L+ N+ ++ L N+YA + ++ +R ++ +
Sbjct: 248 SLLSACKVHH-NLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAER 306
Query: 355 GVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
+ + PG S I K +V+ F S D+ P
Sbjct: 307 NLVQTPGFSLIEAKRKVYKFVSQDKSIPQ 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 46 LFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
L + N + T +I Y+ +G + K +F +M +++ ++T MISG + EA
Sbjct: 100 LLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEA 159
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ-LHGMQVKTIYEYDLILENSLVS 164
+ +F EM+ G +P + + +F A +++G Q MQ + E + +V
Sbjct: 160 LKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVD 219
Query: 165 MYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDH 200
+ + G + ++Y + +M+ + + + W S++ H
Sbjct: 220 LLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVH 256
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 36/205 (17%)
Query: 18 NLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDL 77
N++ + S+I+ YV++G LEK +F + +N+ ++T MISG G+ +A +
Sbjct: 103 NISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKV 162
Query: 78 FDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLFGAMG 132
F M + D + + + S L+ E + F M H P + + +G
Sbjct: 163 FSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLG 222
Query: 133 SVAYLDQGRQL-----------------------HGMQVKTIYEYDLILENS-------- 161
L + +L H +++ I +L + N
Sbjct: 223 RFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLV 282
Query: 162 LVSMYAKCGEIDDSYRIFSNMAYRD 186
L +MYAK + DD +I + +A R+
Sbjct: 283 LANMYAKAQKWDDVAKIRTKLAERN 307
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 153 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 212
E D+I++NSL++MY KCGEI ++ +F+ M + SW+++I + +E L +
Sbjct: 4 EGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGK 63
Query: 213 MLEFG-LYPDTVTFLGVLTACAHAGLVDKG 241
M G + T + VL+AC H G D G
Sbjct: 64 MSSEGRCRVEESTLVNVLSACTHLGSPDLG 93
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 190/367 (51%), Gaps = 7/367 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDS 80
+ +S++ V G E +++ V ++N + + ++ Y G++ F+
Sbjct: 257 TFSSVVKACVGNGDFEVGRQIHGQV-LKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEM 315
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
P D ++WTS I+G V+N +SLF +A G + + GA +A G
Sbjct: 316 TPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTG 375
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
Q+ G +K +++N+ + MYAK G+ID + F D +SW+ MI + H
Sbjct: 376 EQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQH 435
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G A E+L ++E M G+ P+ +T LGVLTAC+H GLVD+G + +M YG+ H
Sbjct: 436 GFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKH 495
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
I++LLGRAG++++A+ F+ E + +W AL+G C + K D ++ R +++EL
Sbjct: 496 SACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHK-DTEMGKRIADKVIEL 554
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRL 380
+P A +V L N+Y + +RK M+ +GV+K PG SWI V VH F DR
Sbjct: 555 EPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRS 614
Query: 381 EPHVEDI 387
P E I
Sbjct: 615 HPISELI 621
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 23/296 (7%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFD--SMPDRDSIAWTSMISGYVQNELIAE----AIS 107
N + T ++ Y +G + A +F+ + ++ + +MI+G+++ L E A+
Sbjct: 182 NVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVR 241
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
+F EM G TF+ + A + GRQ+HG +K E D + +SLV +Y+
Sbjct: 242 VFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYS 301
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
GEIDD R F D +SW S I G +G+ L+++ L G D
Sbjct: 302 FFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSS 361
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDAEEFVLR 283
V+ ACA G + + Y L+ G + + N + ++G + D+ +
Sbjct: 362 VMGACADMAAARTGEQ-----IQGYALKFGVADFTVVKNTQICMYAKSGDI-DSARNTFQ 415
Query: 284 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN--APGHVALCNIYAA 337
+P+ W + +C ++ ++ + RL EL ++ P + L + A
Sbjct: 416 ETEKPDVVSWSVM--ICSYAQHG---FAKESLRLFELMTVSGIVPNQITLLGVLTA 466
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 47/253 (18%)
Query: 5 FGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISG 64
G +AS + G LN LNS+IN Y + Q++ ++ LFD I+
Sbjct: 59 LGQTIHASILINGFLNK-TSSFLNSLINMYSKCNQIQTSRFLFDNSSIK----------- 106
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ---NELIAEAISLFGEMMAHGFSPLN 121
D+++W S+IS Y + E L M G++ +
Sbjct: 107 --------------------DNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSD 146
Query: 122 GTFAVLFGAMGSVAYLDQ----GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
T + + A +D GR +HG +K ++++++ +L+ MYAK G + D+ R
Sbjct: 147 YTLSSVLNA--CCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVR 204
Query: 178 IFS--NMAYRDKISWNSMIMGLSDHG----RASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+F ++ ++ +N+MI G G A EA+ V+ M G+ TF V+ A
Sbjct: 205 VFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKA 264
Query: 232 CAHAGLVDKGWEL 244
C G + G ++
Sbjct: 265 CVGNGDFEVGRQI 277
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS---EALTVYETMLEF 216
NSL++MY+KC +I S +F N + +D +SWNS+I + G + E + M F
Sbjct: 81 NSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRF 140
Query: 217 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAG 272
G T VL AC VD + +++ +G++ G D + +++++ ++G
Sbjct: 141 GYAFSDYTLSSVLNACCFC--VDDNC-FYGRLIHGFGIKLGLDFNVVVATALLDMYAKSG 197
Query: 273 KVKDA 277
++DA
Sbjct: 198 CLRDA 202
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 186/321 (57%), Gaps = 5/321 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+I Y G + A +F + +R ++ +W SM++ VQN A +F ++ P
Sbjct: 250 LIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQVRKE-VEP 308
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ + + A + L+ GR +H + VK + ++ + ++LV +Y KCG I+++ ++F
Sbjct: 309 TDFMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVF 368
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAGL 237
S + + ++WN+MI G + G AL ++E M G+ P VT + +L+ C+ G
Sbjct: 369 SELPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGA 428
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
V++G ++F SM +YG++PG +H+ +++LLGR+G V A EF+ +P++P ++WGAL+
Sbjct: 429 VERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALL 488
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + ++ A ++L ELD +++ HV L N+ A+ R E T +RKEM+ G++
Sbjct: 489 GACRM-HGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIK 547
Query: 358 KAPGCSWILVKGRVHVFSSGD 378
K G SWI VK R+HVF + D
Sbjct: 548 KNVGYSWIAVKNRIHVFQAKD 568
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 15/282 (5%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G AC++FD MP R+ W + IS VQ+ + I+ F E + P + TF
Sbjct: 153 YCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSITF 212
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A + L+ GRQLH V+ Y+ D+ + N L+ Y KCG+I + +FS +
Sbjct: 213 CAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGN 272
Query: 185 RDK-ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
R +SW SM+ L + A V+ + + P VL+ACA G G E
Sbjct: 273 RKNVVSWCSMLTALVQNHEEERACMVF-LQVRKEVEPTDFMISSVLSACAELG----GLE 327
Query: 244 LFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
L S V++ ++ I ++++L G+ G +++AE+ LP E N W A++G
Sbjct: 328 LGRS-VHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELP-ESNLVTWNAMIG- 384
Query: 300 CGLS-KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 340
G + + D D+A R + + P +V L +I + R
Sbjct: 385 -GYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSR 425
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 9/218 (4%)
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
R + WTS+ISG V N A+ F M P + TF +F A + G+Q+
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQI 130
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
HG+ +K YD+ + S MY K G D+ +F M +R+ +WN+ I R+
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRS 190
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+ + ++ L P+++TF L AC ++ G +L +++ ++ G+ +S
Sbjct: 191 LDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQL-----HAFIVRCGYKEDVS 245
Query: 264 I----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ I+ G+ G + AE R+ N W +++
Sbjct: 246 VANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSML 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 4/167 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + ++ Y G + A +F +P+ + + W +MI GY I A+ LF EM
Sbjct: 344 NIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIGGYAHQGDIDMALRLFEEMT 403
Query: 114 --AHGFSPLNGTFAVLFGAMGSVAYLDQGRQL-HGMQVKTIYEYDLILENSLVSMYAKCG 170
+ G P T + V +++G Q+ M++ E +V + + G
Sbjct: 404 LGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSG 463
Query: 171 EIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEF 216
+D +Y NM + IS W +++ HG+ E + E
Sbjct: 464 LVDRAYEFIQNMPIQPTISVWGALLGACRMHGKTELGKIAAEKLFEL 510
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 198/377 (52%), Gaps = 5/377 (1%)
Query: 19 LNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKA 74
NN ++ +M+ + +E +++ + R + +I Y G + A
Sbjct: 219 FNNGKSRTFAAMVRASARLDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDA 278
Query: 75 CDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
+FD MP + ++ W ++I+GY EA+ ++ +M G + T +++ +
Sbjct: 279 RCVFDQMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARL 338
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
A L+ G+Q H V+ + DL+ ++LV+ Y+K G ++++ +F M ++ ISWN++I
Sbjct: 339 ASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALI 398
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G HGR EA+ ++E ML+ + P+ VTFL VL+AC+++GL ++GWE+F SM + +
Sbjct: 399 AGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNI 458
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
+P HY +I LLGR G + +A + P P +W AL+ C + K + ++ A
Sbjct: 459 KPRAMHYACMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACRMHK-NLELGKFAA 517
Query: 315 KRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVF 374
++L ++P +V L NIY ++ + E + + ++ KG+R P +WI V + H F
Sbjct: 518 EKLYGMEPEKLCNYVMLLNIYNSSGKLKEAADVLQTLKRKGLRMLPAYTWIEVNKQPHAF 577
Query: 375 SSGDRLEPHVEDILLQI 391
GD+ + I ++
Sbjct: 578 LCGDKSHKQTKKIYKKV 594
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 152 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 211
+E DL + N ++ M+ +C + D+ F +M RD SW +MI GL D SEA ++
Sbjct: 154 FELDLYMMNRVLFMHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFL 213
Query: 212 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN-SYGLQPGFDHYISIINLLGR 270
M E + TF ++ A A ++ G ++ ++ + P D ++I++ +
Sbjct: 214 CMWEEFNNGKSRTFAAMVRASARLDCIEVGRQIHTCILKRAVNGDPFVD--CALIDMYSK 271
Query: 271 AGKVKDAEEFVLRLP 285
G ++DA ++P
Sbjct: 272 CGNIEDARCVFDQMP 286
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 204/374 (54%), Gaps = 11/374 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKI 56
MYS G + A +G + D ++N++++GY Q G +A L + + + N +
Sbjct: 176 MYSKCGEVRDARKVFDGMVVK-DLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVV 234
Query: 57 AWTCMISGYLSAGQVFKACDLFDSM-PDR---DSIAWTSMISGYVQNELIAEAISLFGEM 112
W +ISG+ ++F M DR D ++WTS++SG+VQN EA F +M
Sbjct: 235 TWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKM 294
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ GF P + T + L A + A + G+++HG + E DL + ++LV MYAKCG I
Sbjct: 295 LLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFI 354
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP-DTVTFLGVLTA 231
++ +F M ++ ++ NSMI G ++HG EA+ ++ M G+ D +TF LTA
Sbjct: 355 SEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTA 414
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C+H G ++ G LF M Y ++P +HY +++L GRAGK+++A + +PV+P+
Sbjct: 415 CSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLF 474
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
+WGAL+ C + ++A A K L EL+P +A + L ++YA ++ +++ +
Sbjct: 475 VWGALLAACR-NHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRI 533
Query: 352 RIKGVRKAPGCSWI 365
+ +RK G SWI
Sbjct: 534 KKGKLRKLQGLSWI 547
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 17/298 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLF 78
+ +S +I Y + L++ ++L + +R + + +I+ Y + GQ+ A LF
Sbjct: 28 EPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLF 87
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV--LFGAMGSVAY 136
D +P + W ++I+ + A+ +F EM N F + + A G V
Sbjct: 88 DKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGD 147
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
G Q+H + +K +E D + ++L+ MY+KCGE+ D+ ++F M +D ++ N+++ G
Sbjct: 148 RIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSG 207
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ G +EAL++ E M G+ P+ VT+ +++ A + E+F M N ++P
Sbjct: 208 YAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLM-NEDRVEP 266
Query: 257 GFDHYISIINLLGRAGKVKDAEEF-----VLRLPVEPNHAIWGALVGVCGLSKTDADV 309
+ S+++ G ++ E F +L L P A AL+ C T+A V
Sbjct: 267 DVVSWTSVLS--GFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACA---TEARV 319
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 190/367 (51%), Gaps = 7/367 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDS 80
+ +S++ V G E +++ V ++N + + ++ Y G++ F+
Sbjct: 257 TFSSVVKACVGNGDFEVGRQIHGQV-LKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEM 315
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
P D ++WTS I+G V+N +SLF +A G + + GA +A G
Sbjct: 316 TPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTG 375
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
Q+ G +K +++N+ + MYAK G+ID + F D +SW+ MI + H
Sbjct: 376 EQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQH 435
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G A E+L ++E M G+ P+ +T LGVLTAC+H GLVD+G + +M YG+ H
Sbjct: 436 GFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKH 495
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
I++LLGRAG++++A+ F+ E + +W AL+G C + K D ++ R +++EL
Sbjct: 496 SACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHK-DTEMGKRIADKVIEL 554
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRL 380
+P A +V L N+Y + +RK M+ +GV+K PG SWI V VH F DR
Sbjct: 555 EPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRS 614
Query: 381 EPHVEDI 387
P E I
Sbjct: 615 HPISELI 621
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 23/296 (7%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFD--SMPDRDSIAWTSMISGYVQNELIAE----AIS 107
N + T ++ Y +G + A +F+ + ++ + +MI+G+++ L E A+
Sbjct: 182 NVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVR 241
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
+F EM G TF+ + A + GRQ+HG +K E D + +SLV +Y+
Sbjct: 242 VFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYS 301
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
GEIDD R F D +SW S I G +G+ L+++ L G D
Sbjct: 302 FFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSS 361
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDAEEFVLR 283
V+ ACA G + + Y L+ G + + N + ++G + D+ +
Sbjct: 362 VMGACADMAAARTGEQ-----IQGYALKFGVADFTVVKNTQICMYAKSGDI-DSARNTFQ 415
Query: 284 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA--PGHVALCNIYAA 337
+P+ W + +C ++ ++ + RL EL ++ P + L + A
Sbjct: 416 ETEKPDVVSWSVM--ICSYAQHG---FAKESLRLFELMTVSGIVPNQITLLGVLTA 466
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 47/253 (18%)
Query: 5 FGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISG 64
G +AS + G LN LNS+IN Y + Q++ ++ LFD I+
Sbjct: 59 LGQTIHASILINGFLNK-TSSFLNSLINMYSKCNQIQTSRFLFDNSSIK----------- 106
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ---NELIAEAISLFGEMMAHGFSPLN 121
D+++W S+IS Y + E L M G++ +
Sbjct: 107 --------------------DNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSD 146
Query: 122 GTFAVLFGAMGSVAYLDQ----GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
T + + A +D GR +HG +K ++++++ +L+ MYAK G + D+ R
Sbjct: 147 YTLSSVLNA--CCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVR 204
Query: 178 IFS--NMAYRDKISWNSMIMGLSDHG----RASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+F ++ ++ +N+MI G G A EA+ V+ M G+ TF V+ A
Sbjct: 205 VFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKA 264
Query: 232 CAHAGLVDKGWEL 244
C G + G ++
Sbjct: 265 CVGNGDFEVGRQI 277
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS---EALTVYETMLEF 216
NSL++MY+KC +I S +F N + +D +SWNS+I + G + E + M F
Sbjct: 81 NSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRF 140
Query: 217 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAG 272
G T VL AC VD + +++ +G++ G D + +++++ ++G
Sbjct: 141 GYAFSDYTLSSVLNACCFC--VDDNC-FYGRLIHGFGIKLGLDFNVVVATALLDMYAKSG 197
Query: 273 KVKDA 277
++DA
Sbjct: 198 CLRDA 202
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 199/371 (53%), Gaps = 20/371 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D N++++ Y + G++E A+ +F ++ ++ ++W MI+GY+ G+ A +L M
Sbjct: 424 DKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQ 483
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+ + Y N+ P + T + ++A L +G++
Sbjct: 484 RGQAEHRINTFDDYEDNKNFP-------------LKPNSVTLMTVLPGCAALAALGKGKE 530
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H VK + D+ + ++LV MYAKCG ++ S +F M+ R+ I+WN +IM HG+
Sbjct: 531 IHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGK 590
Query: 203 ASEALTVYETMLEFG-----LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
EAL ++ M+E G + P+ VT++ + + +H+G+VD+G LF +M +G++P
Sbjct: 591 GEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPT 650
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA-IWGALVGVCGLSKTDADVASRATKR 316
DHY +++LLGR+G++++A + +P W +L+G C + + + ++ A K
Sbjct: 651 SDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQ-NLEIGEIAAKN 709
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
L LDP A +V L NIY++ + +RK+M+ KGVRK PGCSWI VH F +
Sbjct: 710 LFVLDPNVASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVRKEPGCSWIEHGDEVHKFLA 769
Query: 377 GDRLEPHVEDI 387
GD P +++
Sbjct: 770 GDVSHPQSKEV 780
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
I N ++ Y + Q K +FD M R W +MI+GYV+NE EAI LF E
Sbjct: 320 IENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVE 379
Query: 112 MMAH-GFSPLNGTFA-VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
M+ G SP + T + VL + ++LD+ +H VK +E D ++N+L+ MY++
Sbjct: 380 MVFELGLSPNSVTLSSVLPACVRCESFLDK-EGIHSCVVKWGFEKDKYVQNALMDMYSRM 438
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV------------------YE 211
G I+ + IF +M +D +SWN+MI G GR +AL + YE
Sbjct: 439 GRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYE 498
Query: 212 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
F L P++VT + VL CA + KG E+
Sbjct: 499 DNKNFPLKPNSVTLMTVLPGCAALAALGKGKEI 531
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 141/326 (43%), Gaps = 57/326 (17%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN------ 54
MY G +D A + + N DD S NSMIN + + E A LF + + N
Sbjct: 129 MYGKCGDIDAARRVFD-EITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 55 ---KIAWTC------------------------------MISGYLSAGQVFKACDLFDSM 81
+A C +++ Y G+V++A LFD
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVF 247
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
D+D ++W ++IS QN+ EA+ M+ G P T A + A + L G+
Sbjct: 248 DDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGK 307
Query: 142 QLHGMQVKTIYEYDLILENS-----LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
++H + DLI ENS LV MY C + + +F M R WN+MI G
Sbjct: 308 EIHAF---VLMNNDLI-ENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAG 363
Query: 197 LSDHGRASEALTVY-ETMLEFGLYPDTVTFLGVLTACAHA-GLVDKGWELFNSMVNSYGL 254
+ EA+ ++ E + E GL P++VT VL AC +DK E +S V +G
Sbjct: 364 YVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDK--EGIHSCVVKWGF 421
Query: 255 QPGFDHYI--SIINLLGRAGKVKDAE 278
+ D Y+ +++++ R G+++ A
Sbjct: 422 EK--DKYVQNALMDMYSRMGRIEIAR 445
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
++ Y G + A +FD + +RD ++W SMI+ + E A+ LF M+ P +
Sbjct: 127 VNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186
Query: 122 GTFAVLFGAMGS-VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A + + L G+Q+H ++ ++ N+LV+MYAK G + ++ +F
Sbjct: 187 FTLVSVAHACSNLINGLLLGKQVHAFVLRN-GDWRTFTNNALVTMYAKLGRVYEAKTLFD 245
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+D +SWN++I LS + R EAL ML+ G+ P+ VT VL AC+H ++
Sbjct: 246 VFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305
Query: 241 GWEL 244
G E+
Sbjct: 306 GKEI 309
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 89 WTSMISGYVQNE-LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W S + Q+ +AIS + M+ G P N F + A + L+ G+QLH
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K + NS V+MY KCG+ID + R+F + RD +SWNSMI A+
Sbjct: 112 FKFGQALPTAVPNSFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACA------------HAGLVDKG-WELF--NSMVNSY 252
++ ML + P + T + V AC+ HA ++ G W F N++V Y
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMY 231
Query: 253 G 253
Sbjct: 232 A 232
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 208/400 (52%), Gaps = 40/400 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MY+ G + A + +G ++ D + +MI GY +AG++ A+ LFD + RN WT
Sbjct: 159 MYAKCGHVCDARDVFDGIVDR-DVVAWTAMICGYAKAGRMVDARFLFDNMGERNSFTWTT 217
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGY------------------------ 96
M++GY + G + A +L+D M +D + W +MI+GY
Sbjct: 218 MVAGYANYGDMKAAMELYDVMNGKDEVTWVAMIAGYGKLGNVSEARRIFDEITVPWNPST 277
Query: 97 --------VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
QN EAI ++ +M + + T + GA+ + A L R + +
Sbjct: 278 CAALLACYAQNGHAREAIEMYEKMRR---AKIKVTDVAMVGAISACAQLRDIRMSNSLTY 334
Query: 149 KT---IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
E I+ N+L+ M +KCG ID ++R F+ M RD ++++MI ++HG++ +
Sbjct: 335 NIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQD 394
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
A+ ++ M + GL P+ VTF+GVL AC+ +GL+++G F M YG++P +HY ++
Sbjct: 395 AIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMV 454
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
+LLGRAG+++ A + + WG+L+ C + + ++ A + L E+DP ++
Sbjct: 455 DLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYG-NVELGEIAARHLFEIDPTDS 513
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+V L N YA+ND+ ++K M KG++K G SWI
Sbjct: 514 GNYVLLANTYASNDKWECAEEVKKLMSKKGMKKPSGYSWI 553
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 116/233 (49%), Gaps = 15/233 (6%)
Query: 71 VFKACDLFDSMPD-RDSIAWTSMISGYVQNEL-IAEAISLFGEMMAHGFSPLNGTFAVLF 128
++ A LFD+MP+ + WTS+I ++ + IS F M G P TF+++
Sbjct: 63 LYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVL 122
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
A G V +G+Q+H V++ + + I++ +L+ MYAKCG + D+ +F + RD +
Sbjct: 123 NACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVV 182
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
+W +MI G + GR +A +++ M E ++ T+ ++ A+ G + EL++ M
Sbjct: 183 AWTAMICGYAKAGRMVDARFLFDNMGE----RNSFTWTTMVAGYANYGDMKAAMELYDVM 238
Query: 249 VNSYGLQPGFDH--YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G D ++++I G+ G V +A + V N + AL+
Sbjct: 239 -------NGKDEVTWVAMIAGYGKLGNVSEARRIFDEITVPWNPSTCAALLAC 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 113/294 (38%), Gaps = 62/294 (21%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
NKI T ++ Y G V A D+FD + DRD +AWT+MI GY + + +A LF M
Sbjct: 149 NKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDNM- 207
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-YDLILENSLVSMYAKCGEI 172
G Y + G M++ + D + ++++ Y K G +
Sbjct: 208 --------GERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWVAMIAGYGKLGNV 259
Query: 173 DDSYRIFSNMAYRDKISWN-----SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
++ RIF + + WN +++ + +G A EA+ +YE M + V +G
Sbjct: 260 SEARRIFDEIT----VPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVG 315
Query: 228 VLTACAH-----------------------------------AGLVDKGWELFNSMVNSY 252
++ACA G +D W FN M N
Sbjct: 316 AISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNR- 374
Query: 253 GLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALVGVCGLS 303
Y ++I GK +DA + L++ E PN + ++ C S
Sbjct: 375 ----DLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTS 424
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 194/370 (52%), Gaps = 5/370 (1%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
YS GL+ A L + + S N MI+ Y + E A L + +P + I+W +
Sbjct: 171 YSQCGLVSVA-RYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLELMPCKTVISWNTL 229
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+ Y+ G V A +F MP+R++++W SMI+G V A A+ LF EM G P
Sbjct: 230 IARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTE 289
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T + GA L+ G +++ ++ + L N+LV+MY KCG + ++ IF+
Sbjct: 290 VTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNG 349
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF---GLYPDTVTFLGVLTACAHAGLV 238
M + WN+M++GL+ HG E ++ M E + PD VTF+GVL AC+H GLV
Sbjct: 350 MKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLV 409
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
DK F+ MV Y + P HY +++LL R G +++A + ++ P + + +W L+G
Sbjct: 410 DKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLG 469
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C ++++ ++A + K+L +L L +V L NIYA R E+ LR EM V +
Sbjct: 470 ACR-TQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHVPR 528
Query: 359 APGCSWILVK 368
G S I +K
Sbjct: 529 QAGYSQINMK 538
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 175/327 (53%), Gaps = 2/327 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y + A LFD M +D + WT MI Y + E++ LF + GF
Sbjct: 142 LVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYDAY-ESLVLFDRLREEGFVSD 200
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ A + + + R ++ D+IL +++ MYAKCG +D + +F
Sbjct: 201 KVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFD 260
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M ++ ISW++MI HG+ EAL ++ ML G+ P+ +TF+ +L AC+H+GL D+
Sbjct: 261 RMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDE 320
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G F+SM YG++P HY +++LLGRAG++ +A + + + VE + +W AL+G C
Sbjct: 321 GLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGAC 380
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + ++A + + LLEL P N +V L NIYA + ++ R M + ++K P
Sbjct: 381 RVH-GNMELAGKVAESLLELQPKNPGIYVLLSNIYAKAGKWEKVGEFRDLMTQRKLKKVP 439
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDI 387
G +WI V + + FS GDR P ++I
Sbjct: 440 GWTWIEVDNKTYQFSVGDRSHPQSKEI 466
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++ING F+ + + NK ++ Y+ + A LFD MP RD
Sbjct: 25 NALING------------TFNNLIVANK-----LLHFYVQHKAINDAYYLFDEMPTRDPT 67
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W+ M+ G+ + + F E++ +P N T + A + GR +H +
Sbjct: 68 TWSIMVGGFSKLGDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVV 127
Query: 148 VKTIYEYDLILEN----SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
+K Y L+L++ +LV MYAKC I+D+ ++F M +D ++W MI +D+ A
Sbjct: 128 LK----YGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYD-A 182
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
E+L +++ + E G D V + V+ ACA G + + N + GL +
Sbjct: 183 YESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMHRA-RFVNEYICGNGLSLDVILGTA 241
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
+I++ + G V A E R+ E N W A++ G
Sbjct: 242 MIDMYAKCGCVDSAREVFDRMK-EKNVISWSAMIAAYG 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D ++ +++N + G + +A+ + + + + I T MI Y G V A ++F
Sbjct: 200 DKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVF 259
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
D M +++ I+W++MI+ Y + EA+ LF M++ G SP TF L A D
Sbjct: 260 DRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTD 319
Query: 139 QGRQLH-GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMG 196
+G M D+ +V + + G +D++ ++ M +D+ W++++
Sbjct: 320 EGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGA 379
Query: 197 LSDHGRASEALTVYETMLEF 216
HG A V E++LE
Sbjct: 380 CRVHGNMELAGKVAESLLEL 399
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 166/312 (53%), Gaps = 3/312 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N+ + I+ Y AG A +FD + +W ++ISG Q L +AI +F +M
Sbjct: 131 NEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMK 190
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGE 171
HGF P T + A GS+ L QLH Q KT +++ NSL+ MY KCG
Sbjct: 191 RHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGR 250
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+D +Y +F+ M R+ SW SMI+G + HG A EAL + M E G+ P+ VTF+GVL+A
Sbjct: 251 MDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSA 310
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C H G V +G F+ M N YG+ P HY +++LLGRAG DA V +P++PN
Sbjct: 311 CVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSV 370
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
+WG L+G C + D+A + L L+P N +V L NIYA E+ +R M
Sbjct: 371 VWGCLMGACE-KHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFM 429
Query: 352 RIKGVRKAPGCS 363
+ + K P S
Sbjct: 430 KEGRLAKIPAYS 441
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
S W ++I Y + E A+ ++ M+ G P T ++ A+ + G+Q+H
Sbjct: 62 SFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHS 121
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+K + + E+ +++Y K G+ D ++++F SWN++I GLS G A +
Sbjct: 122 YGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMD 181
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM-VNSYGLQPGFDHYI-- 262
A+ V+ M G PD +T + V++AC G +L+ ++ ++ Y Q + +
Sbjct: 182 AIVVFVDMKRHGFEPDGITMVSVMSACGSIG------DLYLALQLHKYVFQAKTNEWTVI 235
Query: 263 ----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
S+I++ G+ G++ A E V + N + W +++
Sbjct: 236 LMSNSLIDMYGKCGRMDLAYE-VFATMEDRNVSSWTSMI 273
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 194/370 (52%), Gaps = 5/370 (1%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
YS GL+ A + + + + S N MI+ Y E A L + +P + ++W +
Sbjct: 169 YSQCGLVSVARHLFD-QIKDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTL 227
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+ Y+ G V A +F MP+R++++W SMI+G V A A+ LF EM G P
Sbjct: 228 IARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTE 287
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T + GA L+ G +++ ++ + L N+LV+MY KCG + ++ IF+
Sbjct: 288 VTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNG 347
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF---GLYPDTVTFLGVLTACAHAGLV 238
M + WN+M++GL+ HG E ++ M E + PD VTF+GVL AC+H GLV
Sbjct: 348 MKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLV 407
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
DK F+ MV Y + P HY +++LL R G +++A + ++ P + + +W L+G
Sbjct: 408 DKARWYFDHMVKRYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLG 467
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C ++++ ++A + K+L +L L +V L NIYA R E+ LR EM V +
Sbjct: 468 ACR-TQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHVPR 526
Query: 359 APGCSWILVK 368
G S I +K
Sbjct: 527 QAGYSQINMK 536
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 181/323 (56%), Gaps = 6/323 (1%)
Query: 65 YLSAGQVFKACDLFDSM-PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH--GFSPLN 121
Y+ G + +A +F + RDS W MISG+ + L +EA+ F EM+ + G +
Sbjct: 146 YVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDH 205
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTI-YEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A G L + +++HG V+ ++ D + N+L+ Y KCG + DS IF
Sbjct: 206 MTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFK 265
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ Y + ++W +MI HG+ E++ ++E M++ G P+ VT +L +C+H GL+D+
Sbjct: 266 TVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQ 325
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP-NHAIWGALVGV 299
G ++F SM++ YGL+P +HY +++L R G++++A + + R+ ++WGAL+
Sbjct: 326 GKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLAG 385
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C + + + + A L +L+P N +VAL IY + + ++++R +MR G+ K
Sbjct: 386 CVMHQ-NVKIGEVAAHHLFQLEPNNTSNYVALWGIYQSRGMVLGVSTIRGKMRDLGLVKT 444
Query: 360 PGCSWILVKGRVHVFSSGDRLEP 382
PGCSWI + GR H F GD P
Sbjct: 445 PGCSWINIAGRAHKFYQGDLSHP 467
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 5/263 (1%)
Query: 43 AQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELI 102
AQ L ++ + N I T ++ Y G + A LFD MP R+ +W MI+ Y N +
Sbjct: 24 AQTLLQSL-LPNVILETDLLLAYTKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNSMY 82
Query: 103 AEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 162
+A+++F G P T LF + G HG+ VK YE +++ NS+
Sbjct: 83 FDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLGWMCHGLVVKLGYEEIVVVNNSV 142
Query: 163 VSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEALTVYETMLEF--GLY 219
+ Y KCG + + +FSN A RD +WN MI G G SEA+ + ML++ G+
Sbjct: 143 LEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIE 202
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
D +T +L+AC G + K E+ +V ++G ++I+ G+ G +KD+E
Sbjct: 203 LDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSEN 262
Query: 280 FVLRLPVEPNHAIWGALVGVCGL 302
+ + N W ++ G+
Sbjct: 263 -IFKTVCYVNLVTWTTMISCYGM 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQEL---------FDT-VPIRNKIAWTCMISGYLSAGQV 71
D +L S+++ + G L K +E+ FD PI N +I Y G +
Sbjct: 203 LDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNA-----LIDNYGKCGSL 257
Query: 72 FKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 131
+ ++F ++ + + WT+MIS Y + E++ LF +MM GF P T + +
Sbjct: 258 KDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASC 317
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSNMAYRDKIS 189
LDQG+++ G + Y + E+ +V ++++CG ++++ ++ M
Sbjct: 318 SHCGLLDQGKKIFGSMISD-YGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTG 376
Query: 190 --WNSMIMGLSDH 200
W +++ G H
Sbjct: 377 SMWGALLAGCVMH 389
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 14/200 (7%)
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q H + ++ILE L+ Y K G I + ++F M R+ SWN MI + +
Sbjct: 21 QCHAQTLLQSLLPNVILETDLLLAYTKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNS 80
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+ALTV+E G+ PD T + GW M + ++ G++
Sbjct: 81 MYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLGW-----MCHGLVVKLGYEEI 135
Query: 262 I----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSKTDADVASRAT 314
+ S++ + G + A + A W ++ G GL
Sbjct: 136 VVVNNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREML 195
Query: 315 KRL--LELDPLNAPGHVALC 332
K +ELD + P ++ C
Sbjct: 196 KYRNGIELDHMTLPSILSAC 215
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 188/362 (51%), Gaps = 12/362 (3%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
S+I+ Y Q A +F V N +I + +G+ A +FD MP RD +
Sbjct: 44 SLISTYAHCQQPNIAHHVFSRV--MNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVT 101
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
W ++I GYV+N +A+S+F M+ P TFA + + + +HG+ V
Sbjct: 102 WNTVIGGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMV 161
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHGRASEAL 207
+ E + IL +LV MYAKCG +D S +F + RD +S WN+MI GL+ HG A +A
Sbjct: 162 EKKVELNYILTAALVDMYAKCGRVDVSKEVFECVV-RDHVSVWNAMINGLAIHGHALDAT 220
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
V+ M + PD+VTF+G+L C+H GLV+ G + F M N + +QP HY ++++L
Sbjct: 221 VVFSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDL 280
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL--SKTDADVASRATKRLLELDPLNA 325
LGRAG +++A + + VEP+ IW +L+ C + K + A + + L +
Sbjct: 281 LGRAGHLEEAYSMIKAMSVEPDVVIWRSLLSACRIHGKKELGEFA------IANISRLES 334
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVE 385
V L N+Y + +R M+ GVRK G SWI + G +H F++ D+ ++
Sbjct: 335 GDFVLLSNMYCSFKNWHGAERVRHMMKKGGVRKKRGKSWIELGGSIHQFNAADQSHAEMK 394
Query: 386 DI 387
I
Sbjct: 395 AI 396
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 200/353 (56%), Gaps = 11/353 (3%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + +++ G L + +E+ V N + + ++ Y G V + +F
Sbjct: 256 DGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVF 315
Query: 79 DSMPD-RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
+ + D +++++WT+M+ Y QN+ + L E F F ++ A +A +
Sbjct: 316 ERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRERGDLNFY----AFGIVLRACSGLAAV 371
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
+ G+++H M V+ D+I+E++LV +YAKCG +D + +F++M R+ I+WNSM+ G
Sbjct: 372 NHGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGF 431
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+ +GR EAL ++E M++ G+ PD++TF+ VL AC+HAGLVD+G ++F +++ YG++P
Sbjct: 432 AQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVF-TLMGEYGIKPV 490
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+HY +I+LLGRAG + +AE + + ++W AL+G C +D A R +++
Sbjct: 491 VEHYNCMIDLLGRAGFIDEAECLLENADCRYDKSLWAALLGAC-TKCSDYRTAERVARKM 549
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGR 370
+EL+P +V L NIY R + +RK M +GV+K G SWI + R
Sbjct: 550 IELEPDFHLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKKMAGKSWIDSQNR 602
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 133/244 (54%), Gaps = 7/244 (2%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LFDS+ +D I+WTS+ISGY +++L ++ISLF EM+A P T + + A ++
Sbjct: 110 LFDSLHVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALND 169
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI-SWNSMIM 195
++ GR H M + ++++ ++ SL+ MY +DD+ R+F + +D + W S+I
Sbjct: 170 VNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIIS 229
Query: 196 GLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+ + E+L + M G+ PD TF +LTACA+ GL+ +G E+ +V GL
Sbjct: 230 CFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVV---GL 286
Query: 255 QPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASR 312
G + + S++++ G+ G V+ + RL E N+ W A++GV +K +V
Sbjct: 287 GFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDL 346
Query: 313 ATKR 316
+R
Sbjct: 347 VRER 350
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 175/310 (56%), Gaps = 6/310 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G +F A +FD +P+++ I WTS+IS YV+N + + LF M+ +
Sbjct: 115 TSLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVE 174
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P A L+ G +H ++ K + DL L N+L++MYAKCG+I ++ +
Sbjct: 175 PDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARK 234
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F N +D +W SMI+G + HG A EAL ++ M F + P+ VTF+GVL AC+HAGL
Sbjct: 235 LFDNTRNKDVTTWTSMIVGHAVHGEAREALQLFSEM-NFIVSPNDVTFIGVLMACSHAGL 293
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
V++G F SM YG++P H+ +++L R+G +++A +F++ +PV PN +W L+
Sbjct: 294 VEEGKRNFRSMNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEMPVPPNAVMWRTLL 353
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C L + +A+ +L+ LDP VAL NIYA + + +R +++
Sbjct: 354 GACSLH-GNLKLATEVRDKLINLDPGYVGDSVALSNIYADKEMWDKKIIVRNQIK---QS 409
Query: 358 KAPGCSWILV 367
KA G S I V
Sbjct: 410 KAHGFSSIEV 419
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 77/141 (54%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+QLH + +K YE + L+ SL+ +YA G + D++++F + ++ I W S+I +
Sbjct: 95 GKQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYVE 154
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
+ ++++ L ++ ML + PD + L+ACA AG ++ G + + + G++
Sbjct: 155 NHKSNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDLH 214
Query: 260 HYISIINLLGRAGKVKDAEEF 280
++IN+ + G + +A +
Sbjct: 215 LNNALINMYAKCGDIGNARKL 235
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 185/326 (56%), Gaps = 12/326 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ------NELIA-----EAISLFGEMM 113
YL G + +A LF M D + + W +MI+G+ Q + L A EA++LF ++
Sbjct: 329 YLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLN 388
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P TF+ + + L+QG Q+H +KT + D+++ +S+++MY KCG I+
Sbjct: 389 RSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIE 448
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ ++F M+ R I W +MI G + HG + +AL ++E M G+ P+ VTF+GVL+AC
Sbjct: 449 RASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACG 508
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
AG+V++ + F M Y ++P DHY+ ++++L R G+V++A + + ++ + + IW
Sbjct: 509 SAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIW 568
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
L+ C LS+ + ++ A ++LL L P + + L N Y + R+ +++ + MR
Sbjct: 569 SNLIVGC-LSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMRE 627
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDR 379
+ + + SWI +K RV+ F + D+
Sbjct: 628 EKIGELKDWSWISIKDRVYSFQTNDK 653
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 131/275 (47%), Gaps = 10/275 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-P 119
+++ Y G++ A +FD M R+++AWT+++ GYVQN + AI LF EM+ H P
Sbjct: 119 LVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYP 178
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC-GEIDDSYRI 178
N T A+ A S+ L G QLH +K ++D + N+L S+Y KC G+++
Sbjct: 179 SNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTA 238
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAG 236
F + +D ISW + I + G A + + V+ ML E + P+ T L+ C
Sbjct: 239 FRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVK 298
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
++ G ++ +++ G + S++ L + G + +A+ + + N W A+
Sbjct: 299 CLELGIQV-HALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN-DVNLVTWNAM 356
Query: 297 VG----VCGLSKTDADVASRATKRLLELDPLNAPG 327
+ + LSK + + + L LN G
Sbjct: 357 IAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSG 391
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
MI+ Y G + +A +F M R I WT+MI+G+ Q+ +A++LF +M G P
Sbjct: 437 MINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPN 496
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRI 178
TF + A GS +++ + K Y+ ++++ LV M + G++ +++ +
Sbjct: 497 LVTFVGVLSACGSAGMVNEAFNYFEIMQKE-YKIKPVMDHYVCLVDMLVRLGQVQEAFDL 555
Query: 179 FSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP-DTVTFLGVLTACAHAG 236
M Y+ + W+++I+G G E +L L P DT T+ +L A AG
Sbjct: 556 IKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLL--SLKPKDTETYKLLLNAYVSAG 613
Query: 237 LVD 239
D
Sbjct: 614 RYD 616
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H VKT D L + LV++YAKCG ++ + ++F +M R+ ++W +++ G +
Sbjct: 100 IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSM 159
Query: 203 ASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A+ ++E ML YP T L AC + G +L ++ + FD
Sbjct: 160 PKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYH---VDFDTS 216
Query: 262 I--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
I ++ +L + G + R E + W A + CG
Sbjct: 217 IGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACG 258
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 191/376 (50%), Gaps = 34/376 (9%)
Query: 16 EGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKAC 75
E N +N D +N++I+ Y + LE A+ +FD + +
Sbjct: 120 EHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPK---------------------- 157
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA--HGFSPLNGTFAVLFGAMGS 133
DRD + WT MI GY Q A+ LF EM + P + T + + A
Sbjct: 158 -------DRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACAR 210
Query: 134 VAYLDQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
+A L G+Q+H ++ I L + N L+ MY+K G++D + +F +M+ R+ ISW
Sbjct: 211 LAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWT 270
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
S++ G HG + +A V++ M + L D +TFL VL AC+H+G+VD+G +LF M
Sbjct: 271 SLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKD 330
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
+ + PG +HY + +L GRAG++ +A + + +EP +W AL+ C + ++ ++A
Sbjct: 331 FVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSAC-RTHSNVELAE 389
Query: 312 RATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRV 371
A K+LLEL N + L NIYA R ++ +R M+ G++K PG SW+ + +
Sbjct: 390 FAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGM 449
Query: 372 HVFSSGDRLEPHVEDI 387
F GDR + I
Sbjct: 450 ETFYVGDRTHSQSQKI 465
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 30/329 (9%)
Query: 40 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISG 95
+E A ++++ + ++ + W M++GY G+ A LF M + D + W+S+ISG
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60
Query: 96 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-- 153
Y Q EA+ +F +M P T L SV L G++ H +K I +
Sbjct: 61 YAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGE 120
Query: 154 -----YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK--ISWNSMIMGLSDHGRASEA 206
DL N+L+ MYAKC ++ + +F + +D+ ++W MI G + +G A+ A
Sbjct: 121 HNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHA 180
Query: 207 LTVYETMLEFG--LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG-FDHYI- 262
L ++ M +F + P+ T VL ACA + F +++Y L+ D +
Sbjct: 181 LQLFSEMFKFDNCIVPNDFTISCVLMACARLAALR-----FGKQIHAYVLRRSRIDSDVL 235
Query: 263 ----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSKTDADVASRATK 315
+I++ ++G V D + V + N W +L+ G+ G S+ V K
Sbjct: 236 FVANCLIDMYSKSGDV-DTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRK 294
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIEL 344
L LD + + C+ DR I+L
Sbjct: 295 EALVLDGITFLVVLYACSHSGMVDRGIDL 323
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 191/376 (50%), Gaps = 34/376 (9%)
Query: 16 EGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKAC 75
E N +N D +N++I+ Y + LE A+ +FD + +
Sbjct: 177 EHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPK---------------------- 214
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA--HGFSPLNGTFAVLFGAMGS 133
DRD + WT MI GY Q A+ LF EM + P + T + + A
Sbjct: 215 -------DRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACAR 267
Query: 134 VAYLDQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
+A L G+Q+H ++ I L + N L+ MY+K G++D + +F +M+ R+ ISW
Sbjct: 268 LAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWT 327
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
S++ G HG + +A V++ M + L D +TFL VL AC+H+G+VD+G +LF M
Sbjct: 328 SLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKD 387
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
+ + PG +HY + +L GRAG++ +A + + +EP +W AL+ C + ++ ++A
Sbjct: 388 FVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSAC-RTHSNVELAE 446
Query: 312 RATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRV 371
A K+LLEL N + L NIYA R ++ +R M+ G++K PG SW+ + +
Sbjct: 447 FAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGM 506
Query: 372 HVFSSGDRLEPHVEDI 387
F GDR + I
Sbjct: 507 ETFYVGDRTHSQSQKI 522
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 158/341 (46%), Gaps = 30/341 (8%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 84
N++++ Y + G++E A ++++ + ++ + W M++GY G+ A LF M +
Sbjct: 46 NALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIE 105
Query: 85 -DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
D + W+S+ISGY Q EA+ +F +M P T L SV L G++
Sbjct: 106 LDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKET 165
Query: 144 HGMQVKTIYE-------YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK--ISWNSMI 194
H +K I + DL N+L+ MYAKC ++ + +F + +D+ ++W MI
Sbjct: 166 HCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMI 225
Query: 195 MGLSDHGRASEALTVYETMLEFG--LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
G + +G A+ AL ++ M +F + P+ T VL ACA + F +++Y
Sbjct: 226 GGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALR-----FGKQIHAY 280
Query: 253 GLQPG-FDHYI-----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLS 303
L+ D + +I++ ++G V D + V + N W +L+ G+ G S
Sbjct: 281 VLRRSRIDSDVLFVANCLIDMYSKSGDV-DTAQVVFDSMSKRNAISWTSLLTGYGMHGCS 339
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 344
+ V K L LD + + C+ DR I+L
Sbjct: 340 EDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDL 380
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 200/372 (53%), Gaps = 21/372 (5%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
FD+ S++N Y + G++ ++ +FD + + W +++ Y + + FD
Sbjct: 285 FDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFD-- 342
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
D D E++ LF +M G P T L A ++ + QG
Sbjct: 343 -DAD---------------FSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGF 386
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY--RDKISWNSMIMGLSD 199
+H ++ + + + + V MY+KCG ++ + ++F M RD + +MI G +
Sbjct: 387 WVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAV 446
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
HG ++AL +Y M GL PD+ TF+ + AC+H GLV++G E+F SM +G++P +
Sbjct: 447 HGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLE 506
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
HY +I+LLGRAG++K+AEE++ +P++PN +W +L+G + + V A +L+E
Sbjct: 507 HYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARI-HGNLGVGEVALTKLIE 565
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
L+P + +V L N+YA+ R ++ +RK M+ GV K PG S + +KG +H F +GDR
Sbjct: 566 LEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDR 625
Query: 380 LEPHVEDILLQI 391
P ++I L+I
Sbjct: 626 SHPFSKEIYLKI 637
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 26/385 (6%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+ + Y G +E A+ +FD + R+ ++W MI GY+ G + A LFD MP+R+ +
Sbjct: 176 NSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLV 235
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W +ISGY + A+ LF EM T A G L +G+ +HG
Sbjct: 236 TWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSM 295
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
++ LIL+ +L+ MY KCG ++ + ++F M+ R+ +SWN+MI+G HG + L
Sbjct: 296 IRLFMRSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDGL 355
Query: 208 TVYETMLEF--------------------GLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
++++ M+ L PD +TF+G+L ACA A L+ +G F
Sbjct: 356 SLFDLMVGMERVKGEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFKQ 415
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP-----VEPNHAIWGALVGVCGL 302
M++ +GL+P F H+ + NLL G + +AEE + + + +W +L+G+C
Sbjct: 416 MIDVFGLKPNFAHFWCMANLLANVGLIDEAEECLKNMAKFDGYISHESLLWASLLGLCRF 475
Query: 303 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 362
K D + + K L++ DP N + L IYA + ++ ++K M+ + + PG
Sbjct: 476 -KRDVYLGEQIAKLLIDTDPNNLAYYQFLLIIYAVAAQWENVSRVQKLMKERKLDIIPGS 534
Query: 363 SWILVKGRVHVFSSGDRLEPHVEDI 387
+ + +K VH F + +E +
Sbjct: 535 NLVDLKNIVHNFKVSNNWREGIEAV 559
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D+ ++I+ Y + + +AI + + GF + TF L A ++ +D G+ H
Sbjct: 101 DTFCVNTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFVSLISACSKMSCVDNGKMCH 160
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G VK ++ L +ENSL MY CG ++ + +F M RD +SWNSMI G G S
Sbjct: 161 GQAVKNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLS 220
Query: 205 EALTVYETMLEFGLYP-------------------------------DTVTFLGVLTACA 233
A +++ M E L + T + +TAC
Sbjct: 221 AAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACG 280
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+G + +G + SM+ + ++ ++I++ + G+V+ A + R+ N W
Sbjct: 281 RSGRLKEGKSVHGSMIRLF-MRSSLILDTALIDMYCKCGRVEAASKVFERMSSR-NLVSW 338
Query: 294 GALV-GVC-------GLSKTDADVASRATKRLLELD 321
A++ G C GLS D V K +E+D
Sbjct: 339 NAMILGHCIHGNPEDGLSLFDLMVGMERVKGEVEVD 374
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 195/369 (52%), Gaps = 24/369 (6%)
Query: 20 NNFDDQSL--NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG--QVFKAC 75
+ FDD ++I+ Y + G E A+++FD + N +AW +++ G +V
Sbjct: 142 HGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVS 201
Query: 76 -----DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
+F M RD +W++MI G+ ++ +A F E++ P + + A
Sbjct: 202 FGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSA 261
Query: 131 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 190
+ G+ LHG K + + + N+L+ Y+KCG +D + +F+
Sbjct: 262 CAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN---------- 311
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
+ L+ HGRA EA+ V+ M E G+ PD VTF+ +L AC+H+GLV++G LF+ M N
Sbjct: 312 ----ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRN 367
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVA 310
YG++P +HY +++L GRA +++ A EF+ ++P+ PN IW L+G C + + ++A
Sbjct: 368 FYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSI-HGNIELA 426
Query: 311 SRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGR 370
RL E+DP N+ HV L N+YA + ++ +R+ M + ++K PG S I +
Sbjct: 427 ELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEIDKV 486
Query: 371 VHVFSSGDR 379
+ F +G++
Sbjct: 487 NYGFVAGEK 495
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 187/344 (54%), Gaps = 2/344 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D +NS+I Y ++ A ++F R+ +++ MI G++ ++ +A +LFD MP
Sbjct: 147 DSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMP 206
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
R+ + W +MI+GY Q +L EA+ LF EM+ F P N + A + L+QGR
Sbjct: 207 QRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRF 266
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H + D L LV +YAKCG ++ + F + +D +WN+M++G + HG+
Sbjct: 267 VHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHGQ 326
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
L + M+ G+ PD VTFLGVL C+HAGLV + ++F+ M YG+ HY
Sbjct: 327 GLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAREGKHYG 386
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+ ++L RAG ++++ E + +P + WG L+G C + + ++A +A ++++E+ P
Sbjct: 387 CMADMLARAGLIEESRELIKGMPNGGDVFAWGGLLGGCRI-HGNVEIAKQAAQQVMEIKP 445
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRI-KGVRKAPGCSWI 365
+ + + NIYA ++ +L +RK + + +K G S I
Sbjct: 446 EDGGVYSVMANIYANTEQWDDLVKIRKSLGANRRAKKITGTSLI 489
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 40/241 (16%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A LF+S+P+ + + ++I + A+ +F + + TF ++ A
Sbjct: 66 ALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTLDFHTFPLILKASSQ 125
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS---- 189
+ L + LH K + D + NSL+ +Y+ ++D+Y++F YRD +S
Sbjct: 126 LHSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVM 185
Query: 190 ---------------------------WNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 222
W +MI G S EA+ ++ M+ PD
Sbjct: 186 IDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPDN 245
Query: 223 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF--DHYIS--IINLLGRAGKVKDAE 278
+ + VL+ACA G +++G V+ Y + G D Y++ +++L + G V+ A
Sbjct: 246 IALVSVLSACAQLGELEQG-----RFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIAR 300
Query: 279 E 279
E
Sbjct: 301 E 301
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 180/325 (55%), Gaps = 4/325 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDS--IAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+++ Y G V A LF MP+ + ++W S+++ QN + EA + F M +GF
Sbjct: 188 LVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFF 247
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + T L A + LHG+ + +L + +L+++Y+K G +++S ++
Sbjct: 248 PDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKV 307
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGL 237
F ++ DK++W +M+ G + HG EA+ +E ++ E G+ PD VTF +L+AC+H+GL
Sbjct: 308 FEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGL 367
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
V +G F M + Y +QP DHY +++LLGR G + DA E + +P EPN +WGAL+
Sbjct: 368 VKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALL 427
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
G C + + + D+ A K L+ LDP + ++ L N+Y+A + + +R M+ K +
Sbjct: 428 GACRVHR-NIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLT 486
Query: 358 KAPGCSWILVKGRVHVFSSGDRLEP 382
+ GCS+I ++H F D P
Sbjct: 487 RNQGCSFIEHGNKIHRFVVDDYTHP 511
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 127/241 (52%), Gaps = 5/241 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S YL G A LFD MP +D ++W S++SG + + E +S+F +M + L
Sbjct: 86 LVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKL 145
Query: 121 NG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
N TF + A S D+G +H +K Y++ + N+LV+MY K G ++ ++R+F
Sbjct: 146 NEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLF 205
Query: 180 SNMAYRDK--ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
S M +K +SWNS++ + +G +EA ++ M G +PD T + +L AC + L
Sbjct: 206 SEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPL 265
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ E+ + ++ + GL +++NL + G++ ++ + V +P+ W A++
Sbjct: 266 -GRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRK-VFEEISKPDKVAWTAML 323
Query: 298 G 298
Sbjct: 324 A 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 109 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 168
F + H F P T + + SV+ R +H +K++ D + + LVS Y K
Sbjct: 36 FNAISTHHFDPFLSTLILHLKSSSSVSIC---RIIHAHVIKSLDYRDGFIGDQLVSCYLK 92
Query: 169 CGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLG 227
G D+Y +F M +D +SWNS++ GL+ G+ E L+V+ M + L + TFL
Sbjct: 93 MGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLS 152
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLR 283
V++AC D+G+ V+ ++ G + + ++N L G+ G V+ A
Sbjct: 153 VISACVSEKACDEGY-----YVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSE 207
Query: 284 LP-VEPNHAIWGALVGVCG 301
+P E + W ++V VC
Sbjct: 208 MPESEKSIVSWNSIVAVCA 226
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
T +++ Y G++ + +F+ + D +AWT+M++GY + EAI F ++ G
Sbjct: 289 TTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGM 348
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDS 175
P + TF L A + +G+ + + +Y+ L++ +V + +CG +DD+
Sbjct: 349 EPDHVTFTHLLSACSHSGLVKEGKYFFRV-MSDVYKVQPRLDHYSCMVDLLGRCGLLDDA 407
Query: 176 YRIFSNMAY 184
+ + NM +
Sbjct: 408 HELIKNMPF 416
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 171/305 (56%), Gaps = 10/305 (3%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-----FSPLNGTFAVLF 128
A LF+ M + ++W S+I +V EAI LF +M+ P + T V
Sbjct: 164 AHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTL 223
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEY--DLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
A G++ LD GR++H + + + + N+LV MYAKCG ++++Y FSNM ++
Sbjct: 224 SACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKN 283
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTACAHAGLVDKGWELF 245
+SWN MI+G + HG EAL ++ ML + PD +TFL VL AC+H GLVD+G F
Sbjct: 284 VVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYF 343
Query: 246 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 305
M Y ++P HY +++LLGRAG +A E + +PVE N IW L+ C +
Sbjct: 344 EIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACR-NYG 402
Query: 306 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA-PGCSW 364
+ ++ + K L+EL+P ++ +V L N+YA+ + E++ R+ M+ + VRK PG S+
Sbjct: 403 NVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRVRKPEPGNSF 462
Query: 365 ILVKG 369
I + G
Sbjct: 463 IGIPG 467
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 120/235 (51%), Gaps = 19/235 (8%)
Query: 55 KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE-AISLFGEM- 112
KI C +S ++ A ++FD +P DS W +MI G+ + + AI F M
Sbjct: 49 KIIMFCAVSQNMNY-----ALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQ 103
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+AH P N TF+ + + + +++ G+QLH K +E + NSL+ MY +I
Sbjct: 104 LAH--RPDNFTFSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDI 161
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-----FGLYPDTVTFLG 227
+ ++++F M + +SWNS+I G+ +EA+ ++ M++ L PD T +
Sbjct: 162 EIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVV 221
Query: 228 VLTACAHAGLVDKGWELFNSM---VNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
L+AC G +D G ++ + + VNS+G + +++++ + G V++A E
Sbjct: 222 TLSACGAIGSLDFGRKVHSFVRDGVNSFG--ESISVFNALVDMYAKCGAVEEAYE 274
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 18/227 (7%)
Query: 118 SPLNGTF----AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
SP N T L + L+ +Q+H T + ++LIL ++ A ++
Sbjct: 2 SPKNTTLWKTEQTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNMN 61
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ +F + D WN+MI G + S + ++ PD TF +L A
Sbjct: 62 YALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDNFTFSFILKIIA 121
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN-LLGRAGKVKDAE--EFVLRLPVEPNH 290
V+ G +L S+ + GF+++ + N L+ G +KD E + +PN
Sbjct: 122 RLRFVNLGKQLHCSL-----FKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNL 176
Query: 291 AIWGALVGV---CGLSKTDADVASRATKRL---LELDPLNAPGHVAL 331
W +++ CG D+ ++ ++ +EL P +A V L
Sbjct: 177 VSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTL 223
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 186/352 (52%), Gaps = 11/352 (3%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D L +++ Y + + AQ++F+ VP+ +A MI+ + G + A +F+ MP
Sbjct: 118 DPFVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMP 177
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG------FSPLNGTFAVLFGAMGSV-- 134
RD ++WT+M++G+ + AI FG MM H P T+ + + +
Sbjct: 178 YRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEG 237
Query: 135 -AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
LD GRQ+HG V + + + SL+++Y K G ++ S +F M R+ +WN+M
Sbjct: 238 KGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMVVREVCTWNAM 297
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I L+ +GR EAL ++E M GL P+++TF+ VLTACA G V +G ELF SM + +
Sbjct: 298 ISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQ 357
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 313
+ P +HY +++LLGRAG +++A E + +P P+ + GA +G C + A
Sbjct: 358 VVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPFPPDKTVLGAFLGACRIH--GAIELGEE 415
Query: 314 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
++L+L + ++ L ++YA +R LR E+ G+ K P S +
Sbjct: 416 IAKMLKLQTQHCGQYLLLSSMYAEKERWNHAADLRNEIMEAGIHKIPAFSMV 467
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 197/369 (53%), Gaps = 7/369 (1%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFD 79
+++ S+I Q G + + + +R K+ A +++ Y G + ++ +FD
Sbjct: 370 ETMASVITACAQLGAFNLGKSIHGYI-LRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFD 428
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
M RD ++W ++++GY QN + +A SLF EM + +P + T L S L
Sbjct: 429 RMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHP 488
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+ +HG ++ ++++ SLV MY KCG++D + R F+ M +D +SW+++I G
Sbjct: 489 GKWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGY 548
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
HG+ AL +Y LE + P+ V FL +L++C+H GL+D+G ++ SM +G P +
Sbjct: 549 HGKGETALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVPNLE 608
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
H+ +++LL RAGKV++A R+ +P + G ++ C + + ++ +++
Sbjct: 609 HHACMVDLLCRAGKVEEAYNLYKRMFSDPVLDVLGIILDACR-ANGNKELGDIIANDIIK 667
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
L P++A +V L + YA+ ++ + + MR G+RK PG S+I + G + F +
Sbjct: 668 LRPMSAGNYVQLAHCYASINKWEGVGEVWTHMRSLGLRKIPGWSFIDIHGTITTFFTDHN 727
Query: 380 LEPHVEDIL 388
P +I+
Sbjct: 728 SHPQFLEIV 736
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 5/279 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T I YL G + A +F+ D+D + WT+MISG VQNE +A+++F +M G
Sbjct: 307 TSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMK 366
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T A + A + + G+ +HG ++ D NSLV+MYAKCG +D SY +
Sbjct: 367 PSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIV 426
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M+ RD +SWN+++ G + +G +A +++ M PD++T + ++ CA G +
Sbjct: 427 FDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQL 486
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G + + V GL+P S++++ + G + A+ +P + + W A++
Sbjct: 487 HPG-KWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQ-DLVSWSAIIA 544
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
G + A R + LE P HV +I ++
Sbjct: 545 GYGY-HGKGETALRLYSKFLETRI--KPNHVIFLSILSS 580
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
M++ Y G + LF+ M RD ++W S++S Y Q + E + L M G P
Sbjct: 208 MVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPG 267
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F + S + GR +HG ++ + D +E S + MY K G I+ ++++F
Sbjct: 268 LQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFE 327
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+D + W +MI GL + A +AL V++ M +FG+ P T T V+TACA G +
Sbjct: 328 RSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNL 387
Query: 241 G 241
G
Sbjct: 388 G 388
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 13/241 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y+ G A +FD MP+R+ + WT++I Y + + EA SLF +M G P
Sbjct: 110 LINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPS 169
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T L + V Y+ + LHG + + DL L NS+V++Y KCG I+D ++F
Sbjct: 170 SVTLLSLLFGVSEVPYV---QCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFE 226
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M RD +SWNS++ + G E L + + M GL P F VL+ G +
Sbjct: 227 FMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRL 286
Query: 241 GWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G +V+ L+ GF D +I S I + + G + A + R ++ + +W A+
Sbjct: 287 G-----RLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFER-SLDKDVVLWTAM 340
Query: 297 V 297
+
Sbjct: 341 I 341
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Query: 123 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 182
TF L A + G LH + D + +SL++ Y K G D + ++F M
Sbjct: 71 TFPSLLKACSFLNLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFM 130
Query: 183 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD--K 240
R+ + W ++I S G EA +++ M G+ P +VT L +L + V
Sbjct: 131 PERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLH 190
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
G +F YG + S++NL G+ G ++D +
Sbjct: 191 GCAIF------YGFMSDLNLLNSMVNLYGKCGSIEDCRKL 224
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 198/347 (57%), Gaps = 3/347 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S NS+I G + + +P + +++ +I+G AG++ A + +MP
Sbjct: 172 DVISWNSVIAACANNGNIGLGFKFLQLMPNPDVVSYNGLINGIAQAGKIEDAVRILSTMP 231
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+S +W S+I+G+V + EA+ +FG+M TF+++ + S++ L G
Sbjct: 232 CPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLSALTWGML 291
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H +K + +++ +SL+ MY+KCG+++D+ IF+ ++ R+ +SWN+MI G + +G
Sbjct: 292 IHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIYGYARNGD 351
Query: 203 ASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGL-VDKGWELFNSMVNSYGLQPGFDH 260
+++A++++E + +E PD +TFL V++AC+H+ + + G + F++M+N YG+ P H
Sbjct: 352 SAQAISLFELLKMERDTKPDGITFLNVISACSHSQIPFEMGIQYFDAMINEYGIAPSIKH 411
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
S+I L+G+ G++ A++ + L E +W +L+ CG ++ D VA A +++ L
Sbjct: 412 CCSMIRLMGQKGELSRAQKMIHELGFESCGVVWRSLLAACG-TQEDLHVAEIAAAKVIGL 470
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
+ +V L N+YA+ R ++ +R M K VRK G SWI V
Sbjct: 471 ERDEDYVYVMLSNMYASFGRWEDVNVIRSLMSKKRVRKEAGSSWIEV 517
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
++I YV+ A LF +P N ++W +ISGY+ AGQ KA LF +
Sbjct: 46 TLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLE------ 99
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
++++ A+A S M+ A ++ L G +H V
Sbjct: 100 ---------RSQICADAFSFTSAMV----------------ACAQLSLLKLGSSIHSKTV 134
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
K + + ++ N L+ MY KCG ++ + RIFS++A +D ISWNS+I +++G
Sbjct: 135 KLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFK 194
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
+ M PD V++ G++ A AG ++ + ++M
Sbjct: 195 FLQLMPN----PDVVSYNGLINGIAQAGKIEDAVRILSTM 230
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 140 GRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
G+Q+H +++ Y + ++ + +L+ Y K ++ +F + + +SWN++I G
Sbjct: 24 GQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYV 83
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
G+ +AL+++ + + D +F + ACA L+ G S ++S ++ G
Sbjct: 84 HAGQFKKALSLFTKLERSQICADAFSFTSAMVACAQLSLLKLG-----SSIHSKTVKLGM 138
Query: 259 DHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
D+ + N L G+ G V+ A + + + W +++ C
Sbjct: 139 DNNTVVANCLIDMYGKCGSVERAVRIFSDIA-DKDVISWNSVIAACA 184
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 175/329 (53%), Gaps = 3/329 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + A LF + ++ I W +M+SG+ + E L EM+ G P
Sbjct: 369 LITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPN 428
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD--LILENSLVSMYAKCGEIDDSYRI 178
T A + +A L G++ H VK ++ L+L NSLV MY++ G++ ++ ++
Sbjct: 429 YVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKV 488
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +++ +D++++ SMIMG G AL ++ M + PD VT + VL AC+H+GLV
Sbjct: 489 FDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLV 548
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+G LF M+ YG+ P +HY +++L GRAG + A+E + + +P AIW L+G
Sbjct: 549 AQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIG 608
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + + A +LLE+ P ++ ++ + N+YAA +R + R MR G ++
Sbjct: 609 ACKIHGNTV-IGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKEAEARTYMRDSGAKR 667
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PGC+W+ V + F +GD P +I
Sbjct: 668 TPGCAWVDVGRELCPFLAGDTSNPRSCEI 696
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 26/323 (8%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD---- 83
N+++ Y + G+LE A+ELFD +P R+ ++W MIS Y S G +A LF M +
Sbjct: 232 NALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIE 291
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL-FGAMGSVAYLDQGRQ 142
R+ I W ++ G + A+ LF +M A L+ V+ A + + G++
Sbjct: 292 RNIIIWNTIAGGCLHTGNFKGALKLFSQMRA--VIQLDSVAMVVGLNACSHIGAVKLGKE 349
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+HG V+T ++ ++N+L++MY++C +++ +Y +F + + I+WN+M+ G + R
Sbjct: 350 IHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDR 409
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
+ E + ML G+ P+ VT +L CA + G E MV + F Y+
Sbjct: 410 SEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKR---EEQFKGYL 466
Query: 263 ----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSKTDADVASRATK 315
S++ + R+GKV +A + L + + +++ GV G +T A K
Sbjct: 467 LLWNSLVEMYSRSGKVLEARKVFDSLS-RKDEVTYTSMIMGYGVSGDGET-------ALK 518
Query: 316 RLLELDPLN-APGHVALCNIYAA 337
E+ LN P HV + + A
Sbjct: 519 LFAEMRRLNIKPDHVTMVAVLIA 541
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
+N I + +I+ Y S + A + + D + W +IS YV+N L +AIS++ M
Sbjct: 125 QNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRM 184
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
++ G P + T+ + A G + D G +H ++ ++ L + N+LV MY + G++
Sbjct: 185 LSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKL 244
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+ + +F M RD +SWN+MI + G EA ++ M E G+ + + + + C
Sbjct: 245 EVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGC 304
Query: 233 AHAGLVDKGWELFNSM 248
H G +LF+ M
Sbjct: 305 LHTGNFKGALKLFSQM 320
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L QG+Q+H + + IL + L++ YA + D+ + D + WN +I
Sbjct: 108 LSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISL 167
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ +A++VY ML G+ PD T+ VL AC D G + ++ S
Sbjct: 168 YVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWS 227
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASR 312
F H +++ + GR GK++ A E +P + + W ++ C S+ D A R
Sbjct: 228 LFVHN-ALVFMYGRFGKLEVARELFDIMPARDDVS-WNTMIS-CYASRGLWDEAFR 280
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 179/333 (53%), Gaps = 7/333 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPD-RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+I Y S G + A +FD M + R+ ++W MI Y + + +F EMM + P
Sbjct: 126 LIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMK-VYEP 184
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE---YDLILENSLVSMYAKCGEIDDSY 176
T + A G + L G +H +K + D+++ LV MY KCG ++ +
Sbjct: 185 DCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAK 244
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHA 235
++F M+YRD SWNS+I+G + HG+A AL + M++ + P+++TF+GVL+AC H+
Sbjct: 245 QVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHS 304
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
G+VD+G F M Y ++P HY +++L RAG +++A V +P++P+ IW +
Sbjct: 305 GMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRS 364
Query: 296 LVGVCGLSKTDADVASRATKRLLELD-PLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 354
L+ C +++ K++ E + + +V L +YA+ R ++ LRK M K
Sbjct: 365 LLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDK 424
Query: 355 GVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
GV K PGCS I + G H F +GD P +DI
Sbjct: 425 GVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDI 457
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 85 DSIAWTSMISGYVQNELIAE-AISLFGEMMA---HGFSPLNGTFAVLFGAMGSVAYLDQG 140
+S W +I Y ++ L + AI L+ ++ + P T+ + A + L +G
Sbjct: 45 NSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFEG 104
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSD 199
+Q+H +K +E D + NSL+ YA CG ++ + ++F M +R+ +SWN MI +
Sbjct: 105 KQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAK 164
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
G L ++ M++ PD T V+ AC G + G
Sbjct: 165 VGDYDIVLIMFCEMMKV-YEPDCYTMQSVIRACGGLGSLSLG 205
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
TC++ Y G + A +F+ M RD +W S+I G+ + A+ F M+
Sbjct: 228 TCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKI 287
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI-YEYDLILENSLVSMYAKCGEIDDSY 176
P + TF + A +D+G M K E L+ LV +YA+ G I ++
Sbjct: 288 VPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEAL 347
Query: 177 RIFSNMAYR-DKISWNSMI 194
+ S M + D + W S++
Sbjct: 348 NVVSEMPIKPDAVIWRSLL 366
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 167/309 (54%), Gaps = 3/309 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y + + +F + + W +++SG+V N L A+ LF EM+
Sbjct: 355 TALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQ 414
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + TF L A +A L Q +H VK + L + + LV +Y+KCG + +++I
Sbjct: 415 PDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQI 474
Query: 179 FSNMAYRDK--ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
F + +DK I W ++I HG A++++ M++ G P+ VTF VL AC+HAG
Sbjct: 475 FDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAG 534
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
LVD+G LFN M+ Y + P DHY I++LLGRAG++ DA + +P+ NHA+WGAL
Sbjct: 535 LVDQGLSLFNLMLKKYQVIPSVDHYTCIVDLLGRAGRLNDAYNLIRTMPITHNHAVWGAL 594
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + + + ++ A + EL+P N +V L +YAA R + +R + G+
Sbjct: 595 LGACVIHE-NVELGEIAARWTFELEPENTGNYVLLAKLYAAVGRWRDAERVRNMVNEVGL 653
Query: 357 RKAPGCSWI 365
RK P S +
Sbjct: 654 RKTPANSLV 662
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 14/256 (5%)
Query: 46 LFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
LF + + +K+A T Y A LFD +P R+ +W +M+ YVQ +A
Sbjct: 43 LFSSSQLSSKLATT-----YAQCHHASYASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDA 97
Query: 106 ISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 164
+++F EM+ G + P + T+ ++ A + ++D G +HG K ++ + ++NSL++
Sbjct: 98 LNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLA 157
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
MY GE + + +F M R +SWN++I GL + A +AL VY M++ G+ D T
Sbjct: 158 MYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCAT 217
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN-LLGRAGKVKDAEEFVLR 283
+ VL AC V+ G E V + L+ G+ + + N LL K + EE L
Sbjct: 218 VVSVLQACGVLKNVELGRE-----VRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLL 272
Query: 284 LP--VEPNHAIWGALV 297
L E + W L+
Sbjct: 273 LNGMEEKDVVTWTTLI 288
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 138/273 (50%), Gaps = 19/273 (6%)
Query: 35 VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS 94
V+A LEK + V +RN ++ Y+ G++ +A L + M ++D + WT++I+
Sbjct: 237 VRALTLEKG--YWGNVVVRNA-----LLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLIN 289
Query: 95 GYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 154
GYV N A+ L M G P + A L A G + L G+ LH ++ E
Sbjct: 290 GYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIES 349
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 214
++++E +L+ MYAKC E + SY++F + + WN+++ G + A A+ +++ ML
Sbjct: 350 EVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEML 409
Query: 215 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM-VNSYGLQPGFDHYISIINLL----G 269
+ PD+ TF +L A+A L D L +M ++ Y ++ GF + + ++L
Sbjct: 410 LENVQPDSPTFNSLLP--AYAILAD----LKQAMNMHCYLVKLGFLCKLEVASMLVDIYS 463
Query: 270 RAGKVKDAEEFVLRLPV-EPNHAIWGALVGVCG 301
+ G + A + +P+ + + IW A++ G
Sbjct: 464 KCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYG 496
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 98/179 (54%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N +++ Y++ G+ A +F+ M +R ++W ++I+G +N +A+ ++ M+
Sbjct: 148 NSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMV 207
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G T + A G + ++ GR++ + ++ Y ++++ N+L+ MY KCGE++
Sbjct: 208 DEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEME 267
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
++ + + M +D ++W ++I G +G A AL + +M G+ P+ V+ +L+AC
Sbjct: 268 EARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSAC 326
>Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:26047948-26049264 | 20130731
Length = 438
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 182/345 (52%), Gaps = 7/345 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM--PDRD 85
+S++N Y L A +LFD P RN + W +I+ Y + A +LF+ M P +
Sbjct: 91 SSLLNFYGHCVSLNHAHQLFDETPHRNDVIWNSIIALYSRVQNITTAVNLFNEMDVPPNE 150
Query: 86 SI--AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
S + +S QN +AIS + M P T L A S+A L+ +++
Sbjct: 151 STFNPIIAALSLSNQNNASFKAISFYRRMTGLKLKPGLITLLALVRASVSIAALNLIKEI 210
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK--ISWNSMIMGLSDHG 201
HG ++ + L + L+ Y +CG + DS +F NM DK + W+++I + HG
Sbjct: 211 HGYAMRNDIDSHPQLSSGLIEAYGRCGCLMDSRTVFKNMRGCDKDVVVWSNLISACALHG 270
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A EAL ++ M G+ PD +TFL VL AC+HAGL D+ F M YG++P +HY
Sbjct: 271 EAKEALEFFQEMEVSGVKPDGITFLAVLKACSHAGLDDEALCFFMKMHRDYGVEPNSEHY 330
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
++++L RAG++ +A E + +PV+ WGAL+G C + + +A A K L E++
Sbjct: 331 SCLVDVLSRAGRLYEAYEVIKGMPVKVTAKAWGALLGACT-NYGELGLAEIAGKALAEVE 389
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 366
P NA +V L IYA+ R E + +EM+ KGV+ G SW++
Sbjct: 390 PDNAANYVLLAKIYASVGRREEADRMIREMKEKGVKTTSGTSWVV 434
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 193/377 (51%), Gaps = 40/377 (10%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTV------PIRNKIAW---TCMISGYLSAGQ------ 70
S N++++GY Q+ +A ELF + P R +A +C G L AG+
Sbjct: 385 SWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVS 444
Query: 71 -----------------VFKAC-------DLFDSMPDRDSIAWTSMISGYVQNELIAEAI 106
V+ C +F + + D + W SMI+G+ N L +A+
Sbjct: 445 QKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDAL 504
Query: 107 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMY 166
+ F M GF P +FA + + ++ L QG+Q+H +K Y ++ + +SLV MY
Sbjct: 505 ACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMY 564
Query: 167 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFL 226
KCG++ + F M ++ ++WN MI G + +G EA+++Y+ M+ G PD +TF+
Sbjct: 565 CKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFV 624
Query: 227 GVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV 286
VLTAC+H+ LVD+G E+F+SM+ + + P DHY II+ LGR G+ + E + +P
Sbjct: 625 AVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPY 684
Query: 287 EPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTS 346
+ + +W ++ C + + +A RA + L L+P N+ +V L N+Y++ R +
Sbjct: 685 KDDTIVWEVVLSSCRV-HANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQV 743
Query: 347 LRKEMRIKGVRKAPGCS 363
+R M + K PG S
Sbjct: 744 VRDLMSDNQIHKDPGYS 760
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 152/308 (49%), Gaps = 21/308 (6%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI----RNKI 56
MY+ G MD A N E NL+ S N MI+GY EKA E F + + +
Sbjct: 295 MYAKTGDMDSAENVFE-NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDV 353
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
+ M++ + +G V +FD M I+W +++SGY Q+ EA+ LF +M
Sbjct: 354 TYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQW 413
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
+P T A++ + + L+ G+Q+H + K + D+ + +SL+++Y+KCG+++ S
Sbjct: 414 QNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSK 473
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+FS ++ D + WNSMI G S + +AL ++ M +FG +P +F + ++CA
Sbjct: 474 HVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLS 533
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYI-------SIINLLGRAGKVKDAEEFVLRLPVEPN 289
+ +G ++ ++ D Y+ S++ + + G V A + +P + N
Sbjct: 534 SLFQGQQIHAQIIK--------DGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGK-N 584
Query: 290 HAIWGALV 297
W ++
Sbjct: 585 IVTWNEMI 592
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 164/311 (52%), Gaps = 19/311 (6%)
Query: 22 FDDQSL-NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
F D L N +I+ Y + Q+ A +FD +P +N ++ ++S + + + AC LF
Sbjct: 37 FSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQ 96
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQ 139
MP+R++++ ++I+ V+N +A+ + MM + P + TFA +F A G + ++
Sbjct: 97 MPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNC 156
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
GR+ HG+ +K ++ ++ + N+L+ MY KCG +D++R+F + +++++ +M+ GLS
Sbjct: 157 GRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQ 216
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA---GLVDKGWELFNS----MVNSY 252
+ E L ++ ML G+ D+V+ +L CA G+ D L + +++
Sbjct: 217 TNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTL 276
Query: 253 GLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAI--WGALVGVCGLSKTD 306
++ GF+ + S++++ + G + AE L H++ W ++ G ++ D
Sbjct: 277 AVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENL---DKHSVVSWNIMISGYG-NRCD 332
Query: 307 ADVASRATKRL 317
++ A +R+
Sbjct: 333 SEKALECFQRM 343
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
A CM Y G A +F+ + + + + +T+M+ G Q + E + LF M+ G
Sbjct: 178 ALLCM---YTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKG 234
Query: 117 F---SPLNGTFAVLFGAMGSVAYLD---------QGRQLHGMQVKTIYEYDLILENSLVS 164
S T V+ S D QG+Q+H + VK +E DL L NSL+
Sbjct: 235 ICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLD 294
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
MYAK G++D + +F N+ +SWN MI G + + +AL ++ M G PD VT
Sbjct: 295 MYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVT 354
Query: 225 FLGVLTACAHAGLVDKGWELFNSM 248
++ +LTAC +G V G ++F+ M
Sbjct: 355 YINMLTACVKSGDVKVGRQIFDCM 378
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 184/335 (54%), Gaps = 7/335 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G++ A +FD M RD ++WTSMI+G+V + L EAI LF M+ G
Sbjct: 137 LIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVN 196
Query: 121 NGT-FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T +VL G S A L GR++HG+ + ++ + +L+ MY+KCG ++ + +F
Sbjct: 197 EATVISVLRGCADSGA-LSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVF 255
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
++ RD W +MI GL+ HG EA+ ++ M + PD T + VL+A +AGLV
Sbjct: 256 DDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVR 315
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G+ FN + Y ++P H+ +++LL + G +++AE+F+ +P++P+ IW L+
Sbjct: 316 EGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWA 375
Query: 300 CGLSKTDADVASRATKRLLELDPLNAP---GHVALCNIYAANDRHIELTSLRKEMRIKGV 356
C + D + A R K LEL ++A ++ N+YA+ + + +R+ M KG+
Sbjct: 376 CKVH-ADTERAERLMKH-LELQGMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGL 433
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
K PG S I V G VH F GD P E I +++
Sbjct: 434 VKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKL 468
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 119/227 (52%), Gaps = 8/227 (3%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIA---EAISLFGEMM-AHGFSPLNGTFAVLFG--A 130
L ++ P +S + ++I Y +A+SLF M+ H P TF F +
Sbjct: 46 LLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKS 105
Query: 131 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 190
G + Q +QLHG K + +DL ++N+L+ MY++ GE+ + ++F M++RD +SW
Sbjct: 106 CGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSW 165
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
SMI G +H EA+ +++ MLE G+ + T + VL CA +G + G ++ + +V
Sbjct: 166 TSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKV-HGIVK 224
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G+ + ++I++ + G ++ A E V ++ + +W A++
Sbjct: 225 EKGIDFKANVCTALIHMYSKCGCLESARE-VFDDVLDRDVFVWTAMI 270
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G + A ++FD + DRD WT+MI G + + EAI LF EM
Sbjct: 236 TALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVK 295
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQ-LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T V+ A + + +G + +Q + + ++ +V + AK G ++++
Sbjct: 296 PDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAED 355
Query: 178 IFSNMAYR-DKISWNSMIMGLSDHGRASEA 206
+ M + D + W ++I H A
Sbjct: 356 FINAMPMKPDAVIWRTLIWACKVHADTERA 385
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 208/391 (53%), Gaps = 44/391 (11%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTV 50
MY FG++ +A + + + + N MI GY + G+ K +LF ++V
Sbjct: 360 MYCKFGMLSFAERLFQRSQGSI--EYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESV 417
Query: 51 PIRNKIAWTC---------------MISGYL--------SAGQVFKACDLFD------SM 81
I + IA +C +I G++ S +++ CD + +
Sbjct: 418 GIVSAIA-SCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR 476
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+RD I W ++IS ++ + EAISLF M+ +P T V+ A +A+L++G
Sbjct: 477 SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGE 536
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+LH + ++ +L L +LV MYAKCG+++ S +F +M +D I WN+MI G +G
Sbjct: 537 RLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNG 596
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A A+ ++ M E + P+ +TFL +L+ACAHAGLV++G +F M SY ++P HY
Sbjct: 597 YAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHY 655
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LLGR+ +++AEE VL +P+ P+ +WGAL+ C + ++ R K ++ +
Sbjct: 656 TCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACK-THNQIEMGIRIGKNAIDSE 714
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
P N ++ + N+Y++ R E ++R+ M+
Sbjct: 715 PENDGYYIMVANMYSSIGRWDEAENVRRTMK 745
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN---ELIAEAISLF 109
N + +S Y ++ A +FD +P RD +AWT+++ GYVQN E+ E IS
Sbjct: 144 ENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEM 203
Query: 110 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
+ P T F A G++ L GR LHG+ VK L +++S++SMY KC
Sbjct: 204 YRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKC 263
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
G ++Y+ FS + +D +SW SMI + G S+ + + MLE + PD G++
Sbjct: 264 GVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPD-----GMV 318
Query: 230 TACAHAGLVDKGWELFNSMVNSYG 253
C +G F + V+ YG
Sbjct: 319 IGCILSG--------FGNSVDVYG 334
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 18/244 (7%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y G +A F + ++D ++WTSMI Y + ++++ + F EM+ + P
Sbjct: 256 VLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPD 315
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ G+ + G+ HG+ ++ Y D +++NSL+SMY K G + + R+F
Sbjct: 316 GMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQ 375
Query: 181 NMAYRDKIS---WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
R + S WN MI+G G+ + + ++ M G+ ++V + + +C G
Sbjct: 376 ----RSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGE 431
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIW 293
++ G + +++ + D IS+ N L G+ K+ + R E + +W
Sbjct: 432 INLGRSIHCNVIKGF-----VDETISVTNSLIEMYGKCDKMNVSWRIFNR--SERDVILW 484
Query: 294 GALV 297
AL+
Sbjct: 485 NALI 488
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y + + LF S+P +D+ W S + L + +S + M + P
Sbjct: 50 LISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPN 109
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ TF ++ + + G LH + K + + + +S VS+Y++C E++D+ ++F
Sbjct: 110 HFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVF 169
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG---LYPDTVTFLGVLTACAHAG 236
+ RD ++W ++++G +G + L M G P+ T G AC + G
Sbjct: 170 DEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLG 229
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
+ G + +V G+ D S++++ + G ++A
Sbjct: 230 DLVSG-RCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREA 269
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 183/330 (55%), Gaps = 6/330 (1%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH---GFS 118
++ Y ++ + +FD M +RD ++W SM+SGY+ N + EA+ LF +M+ GF
Sbjct: 162 VAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGF- 220
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P N T + A A + G +H VKT + D + L+++Y+ CG I + +
Sbjct: 221 PDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAV 280
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + R+ I W+++I HG A EAL+++ ++E GL+ D + FL +L+AC+HAG+
Sbjct: 281 FDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMH 340
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++GW LF +M +YG+ G HY +++LLGRAG ++ A E + +P++P ++GAL+G
Sbjct: 341 EEGWHLFQTM-ETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYGALLG 399
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
+ K + ++A A ++L LDP NA +V L +Y R + LRK +R K ++K
Sbjct: 400 ASRIHK-NIELAELAAEKLFVLDPNNAGRYVILAQMYEDEGRWKDAARLRKIIREKEIKK 458
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDIL 388
G S + ++ F D P +I
Sbjct: 459 PIGYSSVELESGHKKFGVNDETHPLTTEIF 488
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 66 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 125
L V A +FD + +RD W ++I GY AEA+ ++ M G +P T+
Sbjct: 65 LGGTNVEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYP 124
Query: 126 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
+ A G+ +GR +HG VK E+DL + N+ V+ YAKC EI+ S ++F M R
Sbjct: 125 FVLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLER 184
Query: 186 DKISWNSMIMGLSDHGRASEALTVYETML-EFGL-YPDTVTFLGVLTACAHAGLVDKGWE 243
D +SWNSM+ G +G EA+ ++ ML + G+ +PD T + VL A A + G+
Sbjct: 185 DIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYW 244
Query: 244 LFNSMVNS-YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+ +V + L P +I L G ++ A+ ++P + N +W A++ G+
Sbjct: 245 IHCYIVKTGMKLDPAVG--CGLITLYSNCGYIRMAKAVFDQIP-DRNVIVWSAIIRCYGM 301
Query: 303 SKTDADVASRATKRLLEL 320
A A ++L+EL
Sbjct: 302 HGF-AQEALSMFRQLVEL 318
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 185/332 (55%), Gaps = 8/332 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ Y V + +F+S+ + WTS I G VQN A+S+F EMM S
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSIS 301
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + T + + A S+A L+ G Q+H + VK + + ++ +L+ +Y KCG ++ + +
Sbjct: 302 PNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSV 361
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F ++ D +S N+MI + +G EAL ++E + + GL P+ VTF+ +L AC +AGLV
Sbjct: 362 FDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLV 421
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++G ++F+ + N++ ++ DHY +I+LLGRA + ++A ++ P+ W L+
Sbjct: 422 EEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEA-TMLIEEGKNPDVIQWRTLLN 480
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN---DRHIELTSLRKEMRIKG 355
C + + ++A + K++L+ P + H+ L NIYA+ D IE+ S +++R+K
Sbjct: 481 ACKI-HGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLK- 538
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
K P SW+ + VH F +GD P +I
Sbjct: 539 --KTPAMSWVDIDREVHTFMAGDLSHPRAHEI 568
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 6/278 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I GY+ + +A LFD MP+R + W SMIS +V EAI L+ M+ G P
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPD 100
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIF 179
TF+ +F A + +G++ HG+ V +E D + +V MYAK G++ D+ +F
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ +D + + ++I+G + HG EAL V+E M+ + P+ T VL +C + G +
Sbjct: 161 DRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLV 220
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G +L + +V YGL+ S++ + + V+D+ + V +H W + + V
Sbjct: 221 NG-KLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIK-VFNSLAYASHVTWTSFI-V 277
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+ +VA + ++ +P H L +I A
Sbjct: 278 GLVQNGREEVALSMFREMMRCSI--SPNHFTLSSILHA 313
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 123/219 (56%), Gaps = 1/219 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G++ A +FD + D+D + +T++I GY Q+ L EA+ +F +M+
Sbjct: 141 TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIK 200
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T A + + G++ L G+ +HG+ VK E + + SL++MY+KC ++DS ++
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKV 260
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+++AY ++W S I+GL +GR AL+++ M+ + P+ T +L AC+ ++
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAML 320
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
+ G E +++ G+ ++I+L G+ G V+ A
Sbjct: 321 EAG-EQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKA 358
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
+ L+ Y KC I ++ ++F M R ++WNSMI G+ EA+ +Y ML G+
Sbjct: 39 HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVL 98
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
PD TF + A + G+ +G + ++V + + GF I+++ + GK+KDA
Sbjct: 99 PDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV-ATGIVDMYAKFGKMKDA- 156
Query: 279 EFVLRLPVEPNHAIWGALV 297
FV ++ + ++ AL+
Sbjct: 157 RFVFDRVLDKDVVLFTALI 175
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 9/197 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDS 80
+L+S+++ LE A E V ++ NK +I Y G V KA +FDS
Sbjct: 306 TLSSILHACSSLAMLE-AGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDS 364
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+ + D ++ +MI Y QN EA+ LF + G P TF + A + +++G
Sbjct: 365 LTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEG 424
Query: 141 RQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
Q+ + ++ + +L ++ ++ + + +++ + D I W +++
Sbjct: 425 CQIFSL-IRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACK 483
Query: 199 DHGRASEALTVYETMLE 215
HG A + ML+
Sbjct: 484 IHGEVEMAEKFMKKMLD 500
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 166/308 (53%), Gaps = 6/308 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y GQ+ +A +F + + I+W S+ISG+V N + + F ++ P
Sbjct: 427 LISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPN 486
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ ++ +D G+Q+HG ++ ++ ++ L N+LV+MY+KCG +D S +F+
Sbjct: 487 AYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFN 546
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVD 239
M RD I+WN++I S HG+ EA+ +E M + G+ PD TF VL+AC+H+GLVD
Sbjct: 547 EMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLVD 606
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL--RLPVEPNHAIWGALV 297
+F+ MVN YG P DH+ I++LLGR+G + +AE V PN W +L
Sbjct: 607 DATRIFDIMVNIYGFVPSVDHFSCIVDLLGRSGYLDEAERVVTDGYFGAHPN-MCW-SLF 664
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
C + + + + + LLE + N +V L NI A + E LR ++ G
Sbjct: 665 SACAV-HGNLTLGRKVARLLLEREQNNPSVYVLLANICAEAGQWEEAAKLRDMVKQFGTT 723
Query: 358 KAPGCSWI 365
K PGCSWI
Sbjct: 724 KQPGCSWI 731
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+++ Y +A L + +FD + + +WT ++S + A +FD MP
Sbjct: 94 NSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVA 153
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W ++I+G N A L +M N TFA + LD GR +H +
Sbjct: 154 VWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVV 213
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRASE 205
VK+ + + NSL++MY CG + D Y++F M R+ +++N+MI G R +
Sbjct: 214 VKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFED 273
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACA 233
A ++ M + VTF+ VL++C
Sbjct: 274 AFLMFRDMHRGSVCLSEVTFVSVLSSCC 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 15/235 (6%)
Query: 69 GQVFKACDLFDSMPD-RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 127
G+V +A +F+ M + RD ++W M+S + Q + +AI + +M G P T+ L
Sbjct: 337 GKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSL 396
Query: 128 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
A S+ ++ +H + K +L N+L+S Y++ G+I +++IFS++AY+
Sbjct: 397 LSASDSLQMVEM---IHSVLCKNGLNKVEVL-NALISSYSRNGQIKRAFQIFSDLAYKSL 452
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
ISWNS+I G +G + L + +L L P+ + L+ C+ +D G +
Sbjct: 453 ISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHGKQ---- 508
Query: 248 MVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
V+ Y L+ GFD IS+ N L + G + D V VE + W A++
Sbjct: 509 -VHGYILRHGFDSEISLGNALVTMYSKCGFL-DRSLSVFNEMVERDTITWNAIIS 561
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 169/297 (56%), Gaps = 8/297 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G + KA +F+ M RDS++W SM++GYV++ L EAI++F +M+ G P
Sbjct: 255 LVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKP- 313
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + + SV+ LD G Q+HG ++ E++L + NSL+ Y+K G +D + IF+
Sbjct: 314 --DYFSISAILTSVSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFN 371
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M RD +SWNS+I S H + EA++ +E M E G PD +TF+ +L+ACAH GLV+
Sbjct: 372 LMPERDVVSWNSII---SSHCKHPEAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVND 428
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP-NHAIWGALVGV 299
G LF M Y ++P +HY ++NL GRAG V+ A ++R+ E +WGAL+
Sbjct: 429 GERLFALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLYA 488
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
C L + + + +L EL+P N V L IY R ++ +R M +G+
Sbjct: 489 C-LLHGNVTIGEISANKLFELEPDNEHNFVLLMKIYEKAGRLEDMERIRMMMVDRGL 544
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 21/285 (7%)
Query: 5 FGLMDYASNALEGNLNN---FDDQSLNSMINGYVQAGQLEKAQELFDTVPI----RNKIA 57
F ++ N LE +L D + S++ + G + L +P RN
Sbjct: 89 FQALEQVLNDLEASLEKGIKIDPEIYASLLETCYRFGAIHHGIWLHRLIPPALLHRNVGI 148
Query: 58 WTCMISGYLSAGQVFKACDLFDSMPDRDSIA--WTSMISGYVQNELIAEAISLFGEMMAH 115
+ ++ Y S G + A DLFD M RD A W S+ISGY + L +AI+L+ +M+
Sbjct: 149 SSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEE 208
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
G P TF + G + + G ++H V+ + D + N+LV MY+KCG+I +
Sbjct: 209 GVEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKA 268
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-- 233
+IF+ M +RD +SWNSM+ G HG EA+ ++ M+ G PD + +LT+ +
Sbjct: 269 RKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVSSL 328
Query: 234 ------HAGLVDKGWE----LFNSMVNSYGLQPGFDHYISIINLL 268
H ++ +G E + NS++ +Y D SI NL+
Sbjct: 329 DVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLM 373
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 185/332 (55%), Gaps = 8/332 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ Y V + +F+S+ + WTS I G VQN A+S+F EM+ S
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSIS 301
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + TF+ + A S+A L+ G Q+H + VK + + ++ +L+ +Y KCG ++ + +
Sbjct: 302 PNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSV 361
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F ++ D +S N+MI + +G EAL ++E M + G P+ VTF+ +L AC +AGLV
Sbjct: 362 FESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLV 421
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++G ++F+ + N++ ++ DHY +I+LLGRA + ++A ++ P+ W L+
Sbjct: 422 EEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEA-AMLIEEGKNPDVIQWRTLLN 480
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN---DRHIELTSLRKEMRIKG 355
C + + ++A + K++L+ P + H+ L NIYA+ D IE+ S +++R+K
Sbjct: 481 ACKI-HGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLK- 538
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
K P SW+ + VH F +GD P +I
Sbjct: 539 --KTPAMSWVDIDREVHTFMAGDLSHPRAHEI 568
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 147/295 (49%), Gaps = 49/295 (16%)
Query: 28 NSMINGYVQAGQLEKAQELFDTV------------------------------------- 50
NSMI+ +V G+ ++A EL+D +
Sbjct: 70 NSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVV 129
Query: 51 ---PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 107
+ + T ++ Y G++ A +FD + D+D + +T++I GY Q L EA+
Sbjct: 130 LGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALE 189
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
+F +M+ P T A + + G++ L G+ +HG+ VK+ E + + SL++MY+
Sbjct: 190 VFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYS 249
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
KC ++DS ++F+++AY ++W S I+GL +GR AL+++ M+ + P+ TF
Sbjct: 250 KCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSS 309
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFD--HYI--SIINLLGRAGKVKDAE 278
+L AC+ +++ G + +++ ++ G D Y+ ++I+L G+ G V+ A
Sbjct: 310 ILHACSSLAMLEAGEQ-----IHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKAR 359
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 3/238 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I GY+ + +A LFD MP+R + W SMIS +V EAI L+ M+ G P
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPD 100
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIF 179
TF+ +F A + +G++ HG+ V +E D + +V MYAK G++ D+ +F
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ +D + + ++I+G + G EAL V+E M+ + P+ T VL +C + G +
Sbjct: 161 DRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLV 220
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G +L + +V GL+ S++ + + V+D+ + V +H W + +
Sbjct: 221 NG-KLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIK-VFNSLAYASHVTWTSFI 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
+ L+ Y KC I ++ ++F M R ++WNSMI G+ EA+ +Y+ ML G+
Sbjct: 39 HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVL 98
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
PD TF + A + G+ +G + ++V + + GF I+++ + GK+KDA
Sbjct: 99 PDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV-ATGIVDMYAKFGKMKDA- 156
Query: 279 EFVLRLPVEPNHAIWGALV 297
FV ++ + ++ AL+
Sbjct: 157 RFVFDRVLDKDVVLFTALI 175
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
NK +I Y G V KA +F+S+ + D ++ +MI Y QN EA+ LF M
Sbjct: 338 NKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMK 397
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGE 171
G P TF + A + +++G Q+ + ++ + +L ++ ++ + +
Sbjct: 398 KLGHKPNVVTFISILLACNNAGLVEEGCQIFSL-IRNNHSIELTRDHYTCMIDLLGRAKR 456
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 215
+++ + D I W +++ HG A + ML+
Sbjct: 457 FEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLD 500
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 174/320 (54%), Gaps = 1/320 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G + +A + +M RDSI +T + + Q A+ + M G
Sbjct: 461 LVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMD 520
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ A A + ++ G+QLH VK+ ++ + NSLV +Y+KCG I D+ R F
Sbjct: 521 EFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFK 580
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+++ D SWN +I G S +G S AL+ ++ M G+ PD++T L +++AC+H GL++
Sbjct: 581 DISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLEL 640
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G E F+SM Y + P DHY+ +++LLGR G++++A + ++ +P+ I L+ C
Sbjct: 641 GLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNAC 700
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
L A + +R LELDP + ++ L N+Y R+ MR +G+R++P
Sbjct: 701 NLHGNVA-LGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSP 759
Query: 361 GCSWILVKGRVHVFSSGDRL 380
G W+ ++ RVH FS+G+++
Sbjct: 760 GQCWMEIRSRVHHFSAGEKI 779
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y V +A LFD MP+RD ++WT+++S + + + ++A+ LF M+ G P
Sbjct: 55 LLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPN 114
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID-DSYRIF 179
T + + ++ ++G Q+H VK E + + SLV Y KCG +++++
Sbjct: 115 EFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLL 174
Query: 180 SNMAY-RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
S + D +SW +M+ L ++G+ EA +Y M+E G+YP+ TF+ +L A + +
Sbjct: 175 SLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGL 234
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G +L ++ + +G + +++++ + ++ DA + V L E + +W L+
Sbjct: 235 SYG-KLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIK-VSNLTPEYDVYLWTTLI 291
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A +F + + + WTS+I+G+ + L ++ LF EM A G P + T + + GA
Sbjct: 374 AVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSK 432
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
L LHG +KT + D+ + N+LV YA G ID+++ + M RD I++ +
Sbjct: 433 TRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCL 492
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
L+ G AL V M G+ D + L+A A G ++ G +L + Y
Sbjct: 493 AARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQL-----HCYS 547
Query: 254 LQPGFD--HYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
++ GF H + S+++L + G + DA + EP+ W L+
Sbjct: 548 VKSGFQRCHSVSNSLVHLYSKCGSIHDANR-AFKDISEPDAFSWNGLI 594
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 11/284 (3%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELF-DTVPI---RNKIAWTCMISGYLSAGQV-FKACDL 77
++ +L+S + G+ E+ ++ V + N+ T ++ Y G +A L
Sbjct: 114 NEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKL 173
Query: 78 FDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+ D D ++WT+M+S V+N EA ++ +M+ G P TF L GA+ S
Sbjct: 174 LSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLG 233
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L G+ LH + E +L+L+ ++V MY+KC + D+ ++ + D W ++I G
Sbjct: 234 LSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISG 293
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ + + EA++V+ M GL P+ T+ +L A + +D G E F+S V GL+
Sbjct: 294 FTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLG-EQFHSRVIIVGLED 352
Query: 257 GFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D YI +++++ + + V R PN W +L+
Sbjct: 353 --DLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIA 394
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L +G +H +K ++DL L N+L+S+YAK + + +F M RD +SW +++
Sbjct: 30 LKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSS 89
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
+ S+AL +++ M+ G YP+ T L +C G ++G ++ S V
Sbjct: 90 HTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVK 143
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 194/405 (47%), Gaps = 42/405 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MY F L YA L + D N++ING+ + G A E+F+ + + + +
Sbjct: 444 MYIRFELFTYAM-TLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSG 502
Query: 61 MISGYLSAGQVFKACDL------------FDS-------MPD------------------ 83
+ G SA + DL F+S + D
Sbjct: 503 TMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLT 562
Query: 84 ---RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+D ++W MI+GY+ N EAIS F M P TF + A+ ++ L +
Sbjct: 563 KHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREA 622
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
H ++ + ++ NSL+ MYAKCG++ S + F M +D ISWN+M+ + H
Sbjct: 623 MAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMH 682
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G+ A+ ++ M E + D+V+++ VL+AC H+GL+ +GW++F SM + ++P +H
Sbjct: 683 GQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEH 742
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y +++LLG AG + + ++ EP+ +WGAL+ C + ++ + A LL+L
Sbjct: 743 YACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKI-HSNVTLGEVAVHHLLKL 801
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+P N HV L +IYA R + R + G++K PG SW+
Sbjct: 802 EPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 5/263 (1%)
Query: 40 LEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 95
LEK +E+++ + + + T ++ Y G++ KA +LF S+ RD +AW++ +S
Sbjct: 315 LEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSA 374
Query: 96 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 155
V+ E +S+F M G P ++L ++ + G+ +H +K E D
Sbjct: 375 LVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESD 434
Query: 156 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 215
+ + +LVSMY + + +F+ M +D + WN++I G + +G AL ++ +
Sbjct: 435 ISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQL 494
Query: 216 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 275
G+ PD+ T +G+ +ACA +D G L + S G + ++++++ + G +
Sbjct: 495 SGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKS-GFESDIHVKVALMDMYAKCGSLC 553
Query: 276 DAEEFVLRLPVEPNHAIWGALVG 298
E L + W ++
Sbjct: 554 SVERLFLLTKHVKDEVSWNVMIA 576
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I + G + A ++FD MP +D + W +MISG Q+ EA+ +F M GF
Sbjct: 138 TSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFE 197
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ L A+ + + + +HG V+ ++ NSL+ MY KCG++ + R+
Sbjct: 198 VDKVSILNLAPAVSRLGDVGCCKSIHGYVVRR--SICGVVSNSLIDMYCKCGDVHSAQRV 255
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M RD +SW +M+ G +G E L + M + + V + L A +
Sbjct: 256 FDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDL 315
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRL 284
+KG E++N Y LQ G I I+ + + G++K A E L L
Sbjct: 316 EKGKEIYN-----YALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSL 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%)
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
F + + I + S I Y + +AI+L+ ++ G P TF + A S
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
+G ++ V E D+ + SL+ M+ K G +D++ +F M +D + WN+MI GL
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
S EAL ++ M G D V+ L + A + G
Sbjct: 176 SQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLG 214
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 195/371 (52%), Gaps = 5/371 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLF 78
D+ + +++++ LEK +++F + N I + I + ++ A LF
Sbjct: 245 DEFTCSTLMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLF 304
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ DS SMIS Y +++L +A+ LF + P T + L ++ ++
Sbjct: 305 EEQEQWDSALCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPVE 364
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
G Q+H + K +E D ++ NSLV MYAK G ID++ IF+ + +D +SWN+++MGLS
Sbjct: 365 VGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGLS 424
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
+G+ + ++E + G+ PD +T VL AC + LVD+G ++F+ M +G++P
Sbjct: 425 YNGKVCVTMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFGVKPEE 484
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+HY ++ +L RAG +K+A + V ++P + IW +++ C +S D+ ATK ++
Sbjct: 485 EHYSYVVEMLCRAGNLKEAVDIVEKMPYKTTTDIWRSILSACAVSGDLQDIEVVATK-IM 543
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
E P + ++ L +Y + R +RK M +G ++ GCSW+ +K V+ F S
Sbjct: 544 ERAPQISLPYLVLAQVYQMSGRWESAVRVRKAMENRGSKEFIGCSWVGIKNHVYTFESNQ 603
Query: 379 RLEPHVEDILL 389
+DI L
Sbjct: 604 LQHYGGKDIYL 614
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 15/256 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N I+ Y + G + A ++FD + +N +W + G +GQV KAC +FD MP RD +
Sbjct: 54 NRCIDLYTEFGNINDALKVFDDISYKNSTSWNICLKGLFKSGQVGKACYMFDEMPVRDVV 113
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +MISGY + A+ +F EM G P TF++L + S + +++HGM
Sbjct: 114 SWNTMISGYASCGFSSHALGVFVEMQGAGVRPSGFTFSILTSLVSSSC---RAKEVHGMM 170
Query: 148 VKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
+++ E ++++ NSL++MY K +D + + +M D ISWNS+I GR A
Sbjct: 171 IRSGMELSNVVIGNSLIAMYGKFDLVDYCFGVILSMKQLDFISWNSLIWACHRAGRQELA 230
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI-- 264
L + M L PD T +++ C++ ++KG ++F ++ + GF Y SI
Sbjct: 231 LEQFCCMKAAELLPDEFTCSTLMSVCSNLRDLEKGKQVF-----AFCFKVGFV-YNSIVS 284
Query: 265 ---INLLGRAGKVKDA 277
I+L + +++DA
Sbjct: 285 SAAIDLFSKCNRLEDA 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 93/198 (46%), Gaps = 1/198 (0%)
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
SM D I+W S+I + A+ F M A P T + L ++ L++
Sbjct: 205 SMKQLDFISWNSLIWACHRAGRQELALEQFCCMKAAELLPDEFTCSTLMSVCSNLRDLEK 264
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+Q+ K + Y+ I+ ++ + +++KC ++D+ R+F D NSMI +
Sbjct: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSALCNSMISCYAR 324
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
H +AL ++ L + P T +L++ + V+ G ++ +++V+ +G +
Sbjct: 325 HDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPVEVGNQI-HALVHKFGFESDSV 383
Query: 260 HYISIINLLGRAGKVKDA 277
S++++ + G + +A
Sbjct: 384 VTNSLVDMYAKFGFIDNA 401
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 177/327 (54%), Gaps = 5/327 (1%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G A +F+ + + +AW MI G+ QN + EA+SLF EM + TF
Sbjct: 450 YSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTF 509
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A ++ YLD+G+ +H + T + DL ++ +LV MYAKCG++ + ++F ++
Sbjct: 510 LSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVE 569
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+ +SW++MI HG+ + A +++ M+ + P+ VTF+ +L+AC HAG V +G
Sbjct: 570 KSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFY 629
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV--LRLPVEPNHAIWGALVGVCGL 302
FN+M + YG+ P +H+ SI++LL RAG + A E + +R PV +IWGAL+ C +
Sbjct: 630 FNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAA--SIWGALLNGCRI 687
Query: 303 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 362
D+ + L + + + L NIYA E +R +M G++K PG
Sbjct: 688 YGR-MDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGY 746
Query: 363 SWILVKGRVHVFSSGDRLEPHVEDILL 389
S + + +++ F SGD E +++I +
Sbjct: 747 STVEIDRKIYRFGSGDTSEWQMKEICM 773
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A +FD M RD + W+S+IS YV+N + E + +F M+ G P + + A G
Sbjct: 156 AKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGK 215
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ L + +HG ++ D L NSL+ MY++CG + + R+F + R W SM
Sbjct: 216 IGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSM 275
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I + + EAL V+ M + + P+ VT + VL +CA G + +G + ++ +
Sbjct: 276 ISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAM 335
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G D ++I+ K+ E+ + + E N W L+
Sbjct: 336 GVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNE-NIVSWNTLI 378
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N +A T ++ Y G + + +F + P DS ++ +I ++ N L E +SLF +
Sbjct: 32 NPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHI 91
Query: 114 AHGFSPLNGTFAVLF----GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
G S L A L+ A+ V L GR+LHG +K+ + D ++ SLV MY +
Sbjct: 92 QMG-SKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGEL 150
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
+ D+ ++F M RD + W+S+I ++G E L ++ +M+ G+ PD+V L V
Sbjct: 151 CFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVA 210
Query: 230 TACAHAGLV 238
AC G +
Sbjct: 211 EACGKIGCL 219
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 17/282 (6%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + +A LF+ + DR + WTSMIS Y QNE EA+ +F +M P
Sbjct: 244 LIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPN 303
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD-LILENSLVSMYAKCGEIDDSYRIF 179
+ T + + + L +G+ +H ++ L L +L+ Y+ C ++ ++
Sbjct: 304 DVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLL 363
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
++ + +SWN++I + G EA+ + M+ G+ PD+ + ++A A +G +
Sbjct: 364 HSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQ 423
Query: 240 KGWELFNSMVNSYGLQPG-FDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
F ++ + ++ G FD ++ S++++ + G A ++ + W +
Sbjct: 424 -----FGQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIK-HKSIVAWNCM 477
Query: 297 VGVCGLSKTDADVASRAT-----KRLLELDPLNAPGHVALCN 333
+CG S+ V + + K LE++ + + C+
Sbjct: 478 --ICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACS 517
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 173/318 (54%), Gaps = 24/318 (7%)
Query: 40 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 99
++ A+ +FD+ R+ +W MI Y+ +G + +A +LFD M +RD ++W+++I+GYVQ
Sbjct: 1 MDDARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQV 60
Query: 100 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 159
E + F M+ P T + ++A R L
Sbjct: 61 GCFMEDLEFFHNMLQSEVKPNEYTM------VSALAIKMNDRLL---------------- 98
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKI-SWNSMIMGLSDHGRASEALTVYETMLEFGL 218
SL+ MYAKCGEID + +F + K+ WN+MI G + HG+ EA++++E M +
Sbjct: 99 ASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERV 158
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
P+ VTF+ +L AC+H ++ +G F M + YG+ P +HY +++LL R+ +K+AE
Sbjct: 159 SPNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEAE 218
Query: 279 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN 338
E +L +P+ P+ AIWGAL+ C + K D + R + + E+DP + +V L NIY+ +
Sbjct: 219 EMILSMPMAPDVAIWGALLNACRIYK-DMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTS 277
Query: 339 DRHIELTSLRKEMRIKGV 356
R E LR+ I+ +
Sbjct: 278 GRWNEARILRERNEIREI 295
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 179/332 (53%), Gaps = 8/332 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G++ A +++ + + S+ WTSM+ GY +N EA SLF + H L
Sbjct: 440 LLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREAFSLFH--LGHSEWKL 497
Query: 121 ---NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
+ G+V Y D G+Q+H +K + ++ + N +V MY KCG +DD+ +
Sbjct: 498 IMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIK 557
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG- 236
+FS MA D +SWN++I G H + AL ++ M E G+ PD +TF+ +++A
Sbjct: 558 MFSGMASTDIVSWNTLISGYLTHRQGDRALEIWLKMQEEGIKPDDITFVLIISAYRQTSL 617
Query: 237 -LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
LVD LFNSM Y ++P HY S I++LG G +++A E + ++ +P+ +W A
Sbjct: 618 NLVDDCRILFNSMKTVYHIEPTSQHYSSFISVLGHWGLLEEALETINKMSFKPSAFVWRA 677
Query: 296 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
L+ C L K + + A K +L L+P + ++ + N+++++ R R+ MR KG
Sbjct: 678 LLDGCRLHK-NTMIGKLAAKNILALEPNDPSTYILVSNLHSSSGRWDCSERTRENMREKG 736
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
RK P SWI+ + ++H F + DR +DI
Sbjct: 737 FRKHPAQSWIICRKKMHSFYARDRSHQQDKDI 768
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 2/251 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I Y G ++ LF+ + +R+ I WT M+ Y+ G V +FD MP+++ +
Sbjct: 306 NALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNCV 365
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+ ++SG +N +A+ LF M+ G + + + A +A RQ+HG
Sbjct: 366 TYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQMHGFA 425
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+K + ++ +E +L+ MY +CG + D+ +++ + + W SM+ G + +G+ EA
Sbjct: 426 IKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREAF 485
Query: 208 TVYET-MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+++ E+ L D V +L+ C G D G ++ + V +G ++
Sbjct: 486 SLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQI-HCQVLKFGFHSNVQVGNVVVE 544
Query: 267 LLGRAGKVKDA 277
+ + G V DA
Sbjct: 545 MYFKCGNVDDA 555
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 18/247 (7%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGT 123
Y G A +FD MP+RD +W +++S VQ + + LF +M+ G T
Sbjct: 210 YSKCGFYKNAFKVFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFT 269
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
+ A + L +G+Q+H VK E +L + N+L+ Y G+IDD +F M+
Sbjct: 270 LSTFLTACAASGLLMEGKQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMS 329
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
RD I+W M+ + G L +++ M E + VT+ +L+ K E
Sbjct: 330 VRDVITWTEMVRVYMEFGFVDLGLKIFDEMPE----KNCVTYNVLLSGLCRNAEGLKAVE 385
Query: 244 LFNSMV------NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
LF MV + L G I+ +LL + F ++ N + GAL+
Sbjct: 386 LFIRMVEEGVELTDFSLSSG----INACSLLADYRVSRQMHGFAIKFGFGSNVFVEGALL 441
Query: 298 GV---CG 301
+ CG
Sbjct: 442 DMYTRCG 448
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 7/212 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGF 117
T +IS Y++ A LF S + ++++++IS + ++ +++ LF M+
Sbjct: 102 TALISTYINLRLFSYAHRLFLSQSPPNIVSYSALISAFSKSNREKQSLFLFLHMITVSSL 161
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P + T+ + A + L G QLH +KT Y + + N+L+ Y+KCG ++++
Sbjct: 162 RPNHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFK 221
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAG 236
+F M RD SWN+++ + ++ ML GL D T LTACA +G
Sbjct: 222 VFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASG 281
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
L+ +G + V+++ ++ G + +++ N L
Sbjct: 282 LLMEGKQ-----VHAHAVKVGLEDELNVGNAL 308
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 165/318 (51%), Gaps = 7/318 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y ++ A LF M ++ I W SMISG VQ ++A+ LF EM G P
Sbjct: 394 LISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPD 453
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T A L + L G LH ++ + + +L+ MY+KCG +D + ++F
Sbjct: 454 AITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFY 513
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
N+ +WN++I G S +G A Y + E GL PD +TFLGVL AC H GLV
Sbjct: 514 NIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYL 573
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G E FN M YGL P HY I+ LLG+ G K+A EF+ ++ ++P+ A+WGAL+ C
Sbjct: 574 GLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNAC 633
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + + + K+L L+ N +V + N+YA R ++ +R+ M+ G
Sbjct: 634 CIQR-EVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSG---GD 689
Query: 361 GCSWILVKGRVHVFSSGD 378
GCS + V + V S+ D
Sbjct: 690 GCSGVSV---IDVISADD 704
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 41/355 (11%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y+ G A ++FD M RD ++W +I GY QN + AI LF +M+ F
Sbjct: 95 TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK 154
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T L + G + QGR +HG +K + D L N+L+SMYAKC +++ S +
Sbjct: 155 PNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLL 214
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA----- 233
F M + +SWN+MI +G +A+ ++ ML+ G +P +VT + +++A A
Sbjct: 215 FDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPENV 274
Query: 234 HAGLVDKGW----ELFNSMVNSYGLQPGFDH----------------YISIINLLGRAGK 273
H +V G+ + S+V Y Q GF + +II+ G
Sbjct: 275 HCYVVKCGFTNDASVVTSLVCLYAKQ-GFTNTAKQLYKYYPTKDLITLTAIISSYSEKGD 333
Query: 274 VKDAEE-FV--LRLPVEPNH-AIWGALVGVCGLSK--TDADVASRATKRLLELDPLNAPG 327
++ A E F+ ++L ++P+ A+ G L G+ S K L D L A G
Sbjct: 334 IESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANG 393
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW-ILVKGRVHVFSSGDRLE 381
++L Y+ D SL +MR K P +W ++ G V S D +E
Sbjct: 394 LISL---YSRFDEIEAALSLFYDMREK-----PLITWNSMISGCVQAGKSSDAME 440
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 13/282 (4%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G A L+ P +D I T++IS Y + I A+ F + +
Sbjct: 291 TSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIK 350
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + + ++ G HG VK+ D ++ N L+S+Y++ EI+ + +
Sbjct: 351 PDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSL 410
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +M + I+WNSMI G G++S+A+ ++ M G PD +T +L+ C G +
Sbjct: 411 FYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNL 470
Query: 239 DKGWELFNSMVNSYGLQPG--FDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
G L +SY L+ + +I ++I++ + G++ AE+ + +P A W
Sbjct: 471 RIGETL-----HSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIK-DPCLATWN 524
Query: 295 ALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
A++ + GL T S+ ++ L+ D + G +A C
Sbjct: 525 AIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACT 566
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 19/223 (8%)
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL---------FGAMGSVAYLDQGR 141
S+ QN + A+ +F +++ +P TF++L F S A L Q R
Sbjct: 19 SLFHSLFQNA-TSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QAR 76
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+ +K + + SL+ +Y K G + +F M+YRD +SWN +I G S +G
Sbjct: 77 QIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNG 136
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A+ ++ ML P+ T + +L +C L+ +G ++ +G++ GF
Sbjct: 137 YLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRS-----IHGFGIKAGFGLD 191
Query: 262 ISIIN-LLGRAGKVKD--AEEFVLRLPVEPNHAIWGALVGVCG 301
+ N L+ K D A + + E + W ++GV G
Sbjct: 192 SHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYG 234
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 61 MISGYLSAGQVFKACD-LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+I Y GQ + +F+ RD + W+S+I Y + +A+ LF +M P
Sbjct: 314 LIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEP 373
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T + A +++ G +HG +K + + + N+L++MYAKCG +DDS +IF
Sbjct: 374 NYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIF 433
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
M RD ++WNSMI HG +AL + M E G+ D VTFL VL+AC HAGLV
Sbjct: 434 LEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVT 493
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G +LF + + +HY +I+L GR+GK++DA E + +P++P+ IW +LV
Sbjct: 494 EGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSS 553
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C L D+A + +L+ +P NA + L I+A R +++ +R+ M+++ +RK
Sbjct: 554 CKL-HGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKC 612
Query: 360 PGCSWI 365
G S I
Sbjct: 613 YGFSRI 618
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 14/261 (5%)
Query: 47 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 106
F T + I +IS Y + A +FD+MP RD+I W SMI+ Y+QN L+ EA+
Sbjct: 93 FITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEAL 152
Query: 107 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ--GRQLHGMQV---KTIYEYDLILENS 161
+ + GF P A + G L GRQ+HG+ V + ++ + L +
Sbjct: 153 QMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTA 212
Query: 162 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
V Y +CG+ + +F M ++++SW ++I G +++ AL Y M G+ P+
Sbjct: 213 FVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPN 272
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD--HYIS--IINLLGRAGKVKDA 277
VT + +L ACA G V G E ++ Y + GFD H S +I L G+
Sbjct: 273 RVTLIALLAACARPGFVKYGKE-----IHGYAFRRGFDSCHSFSPALIYLYCECGQSLHL 327
Query: 278 EEFVLRLPVEPNHAIWGALVG 298
E + + +W +++G
Sbjct: 328 AERIFEGSSLRDVVLWSSIIG 348
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T + Y G A +FD M ++ ++WT++ISG N+ A++ + EM G S
Sbjct: 211 TAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVS 270
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE-IDDSYR 177
P T L A ++ G+++HG + ++ +L+ +Y +CG+ + + R
Sbjct: 271 PNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAER 330
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
IF + RD + W+S+I + G + +AL ++ M P+ VT L V++AC +
Sbjct: 331 IFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSS 390
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
G + + + +G+ GF ++ ++IN+ + G + D+ + L +P + W +
Sbjct: 391 FKHG-GVIHGYILKFGI--GFSIFVCNALINMYAKCGSLDDSRKIFLEMPSR-DSVTWNS 446
Query: 296 LVGVCGL 302
++ GL
Sbjct: 447 MISAYGL 453
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 14/256 (5%)
Query: 93 ISGYVQNELIAEAISLFGEMM--AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
I V L + + F ++ AH F+ + + A + G QLH + T
Sbjct: 36 IKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFIT 95
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 210
D I+ NS++SMYAK +I+ + ++F M +RD I+WNSMI +G EAL +
Sbjct: 96 GSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQML 155
Query: 211 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL---FNSMVNSYG---LQPGFDHYISI 264
+ G P +++ C +D GW + + +V G +Q +
Sbjct: 156 KDFYFLGFLPKPELLASMVSMCGRE--MDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAF 213
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++ R G A + V+ N W A++ C + D DVA A R ++++ +
Sbjct: 214 VDFYFRCGDSLMARSVFDEMEVK-NEVSWTAVISGCA-NNQDYDVA-LACYREMQVEGV- 269
Query: 325 APGHVALCNIYAANDR 340
+P V L + AA R
Sbjct: 270 SPNRVTLIALLAACAR 285
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 173/313 (55%), Gaps = 2/313 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y S G + LFD MP RD ++WT MI GY +A+ +F +M G P
Sbjct: 150 LLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPN 209
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T A S ++ G + M + +E D+IL +L+ MY KCG +++ ++F
Sbjct: 210 RVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFC 269
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+M ++ + N +I GL+ EAL + M G+ D VT + VL+AC+H+GLV+K
Sbjct: 270 DMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEK 329
Query: 241 GWELFNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G +F+ +V+ YG P HY +++LL RAG++++A + + +P EP A+WG+L+ +
Sbjct: 330 GRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLL-L 388
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
S+ D + + A +L+EL+P N +V L N+YA R ++ +R M+ +G+ K
Sbjct: 389 GSKSRDDLEFSEFAATKLVELEPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLTKD 448
Query: 360 PGCSWILVKGRVH 372
GCS + V+ + H
Sbjct: 449 LGCSSVEVEHQRH 461
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+P + S+I + + + +SL+ M + P N TF LF ++ Q
Sbjct: 69 IPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQS 128
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+ ++ +K Y D+ + NSL+ +YA G ++ ++F M RD +SW MIMG +
Sbjct: 129 QCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNG 188
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFD 259
G+ ++AL V+E M G+ P+ VT + L+ACA + ++ G W + MV G +
Sbjct: 189 GKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVW--IDDMVRRNGWELDVI 246
Query: 260 HYISIINLLGRAGKVKD 276
++I++ + G+V++
Sbjct: 247 LGTALIDMYVKCGRVEE 263
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 177/347 (51%), Gaps = 9/347 (2%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR-- 84
+ S+++ Y + G A ++F RN I W MI+G + + +A +LF+ M D
Sbjct: 276 VTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGI 335
Query: 85 --DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
DS W S+ISG+ Q + EA F +M G +P L G L +
Sbjct: 336 LPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKA 395
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR--DKISWNSMIMGLSDH 200
+HG ++ + D L +LV Y KCG + + +F + D WN+MI G +
Sbjct: 396 IHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTN 455
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G A V+ ML+ + P++ TF+ VL+AC+H+G +++G F M+ YGL P +H
Sbjct: 456 GDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFR-MIRKYGLDPKPEH 514
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
+ +++LLGRAG++ +A + V L EP +++ +L+G C D+++ +L+++
Sbjct: 515 FGCVVDLLGRAGQLGEARDLVQEL-AEPPASVFDSLLGACR-CYLDSNLGEEMAMKLIDI 572
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
+P N V L NIYAA R E+ +R + KG+ K G S I V
Sbjct: 573 EPKNPAPLVVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISMIEV 619
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 128/243 (52%), Gaps = 5/243 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGF 117
T +++ Y G + + +F+++ ++ + + + +SG +QN +F +M M
Sbjct: 175 TSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEE 234
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T + A +++ + G+Q+HG+ +K +++ SLV MY+KCG ++
Sbjct: 235 KPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFD 294
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+FS R+ I+WNSMI G+ + + A+ ++E M++ G+ PD+ T+ +++ A G+
Sbjct: 295 VFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGV 354
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE---FVLRLPVEPNHAIWG 294
+ ++ F+ M G+ P S++++ G + ++ A+ + LR+ V+ + +
Sbjct: 355 CVEAFKYFSKM-QCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLAT 413
Query: 295 ALV 297
ALV
Sbjct: 414 ALV 416
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 3/177 (1%)
Query: 59 TCMISGYLSAGQVFK-ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 117
T +I+ Y + + F A +LFD MP A+ +++SG +N +A+ LF ++
Sbjct: 74 TALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNI 133
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P + T L A V +Q+H + K EYD+ + SLV+ Y+KCG + S +
Sbjct: 134 RPNSVTIVSLLSAR-DVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNK 192
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACA 233
+F N+ ++ +++N+ + GL +G V++ M + P+ VT + V++ACA
Sbjct: 193 VFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACA 249
>Medtr2g082550.1 | PPR containing plant-like protein, putative | HC
| chr2:34637734-34634734 | 20130731
Length = 631
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 190/354 (53%), Gaps = 34/354 (9%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N+++N Y + + +A +FD +P R+ ++W+ +++ Y + + K LF M RD
Sbjct: 201 NALVNLYAKCLCVREAHAIFDLMPHRDVVSWSGVLT-YFTNKEYEKGLSLFSQMC-RD-- 256
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
G NE+ +A+ + +M GF P T + + A YL + ++
Sbjct: 257 -------GVETNEVTWKAMEMLRKMQNMGFKPNEITISSILQA----CYLSESLRM---- 301
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K I+ Y V + K + +F +A +D ++W +MI + HG EAL
Sbjct: 302 CKEIHYY--------VFRHWKV------WNVFDMIAIKDVVAWTTMINANAMHGNGKEAL 347
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++E ML + PD+VTF+ VL++C+H+ LV++G ++FNSM + ++P HY ++++
Sbjct: 348 FLFEKMLLSMVKPDSVTFICVLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSCVVDI 407
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
RAG++ +A EF+ R+P+ P W +L+ C + K + ++A + K+L E++P +
Sbjct: 408 YSRAGRLNEAYEFIQRMPMGPTAGAWKSLLAGCRVYK-NVELAKISAKKLFEIEPSRSRD 466
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
+VALCNI E + +R M+ G+ K PGCSW+ V RVH F +GD+ E
Sbjct: 467 YVALCNILVTAKLWSEASKIRMFMKESGITKTPGCSWLHVGNRVHNFVAGDKKE 520
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 104/267 (38%), Gaps = 73/267 (27%)
Query: 39 QLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR-------------- 84
++A++LFD +P + + +IS + G + +A ++ S+ +R
Sbjct: 27 NFKRARQLFDNIPQPDPTTSSTLISALTTHGLLNEAINICTSLRERGIKLDIPVFMAVAK 86
Query: 85 ----------------DSIAWTSMISGYVQNELI-----------------------AEA 105
D+ +M + +V N LI +
Sbjct: 87 ACAASRDALNVKELHNDATRCGAMFNVFVGNALIHAYGKCKCVEGERRVFDDMVVRDVKG 146
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+++F EM +G T + + A + L G+ +HG V+ ++ + N+LV++
Sbjct: 147 LNVFHEMGWNGVKLDPVTVSSILPACADLKDLKSGKAIHGFAVRNGMVENVFVCNALVNL 206
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIM--------------------GLSDHGRASE 205
YAKC + +++ IF M +RD +SW+ ++ G+ + +
Sbjct: 207 YAKCLCVREAHAIFDLMPHRDVVSWSGVLTYFTNKEYEKGLSLFSQMCRDGVETNEVTWK 266
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTAC 232
A+ + M G P+ +T +L AC
Sbjct: 267 AMEMLRKMQNMGFKPNEITISSILQAC 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 28/218 (12%)
Query: 73 KACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG 132
+A LFD++P D +++IS + L+ EAI++ + G F + A
Sbjct: 30 RARQLFDNIPQPDPTTSSTLISALTTHGLLNEAINICTSLRERGIKLDIPVFMAVAKACA 89
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
+ ++LH + +++ + N+L+ Y KC ++ R+F +M RD
Sbjct: 90 ASRDALNVKELHNDATRCGAMFNVFVGNALIHAYGKCKCVEGERRVFDDMVVRD------ 143
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-----HAGLVDKGWELFNS 247
+ L V+ M G+ D VT +L ACA +G G+ + N
Sbjct: 144 -----------VKGLNVFHEMGWNGVKLDPVTVSSILPACADLKDLKSGKAIHGFAVRNG 192
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
MV + + +++NL + V++A +P
Sbjct: 193 MVENVFVCN------ALVNLYAKCLCVREAHAIFDLMP 224
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 179/333 (53%), Gaps = 8/333 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + ++ +F+ + + +I+W ++ISGY QN L EA F + P
Sbjct: 427 LITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKE-IKPN 485
Query: 121 NGTFAVLFGAMGSVA--YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
TF + A+ + L G++ H +K D + +L+ MY K G I++S R+
Sbjct: 486 QYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRV 545
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+ + + SW MI + HG +++Y+ + G D++TFL VL AC G+V
Sbjct: 546 FNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMV 605
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D G +F+SMV + ++P +HY ++++LGR G++ +AEE + ++P P ++ +L+G
Sbjct: 606 DVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLG 665
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C L + ++A R L+++DP ++ +V + N+YA ++ +RK MR +GV+K
Sbjct: 666 SCKL-HGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKK 724
Query: 359 APGCSWILVKG----RVHVFSSGDRLEPHVEDI 387
G SW+ V +H FSSGD+ P E I
Sbjct: 725 EVGFSWVDVANVDSLHLHGFSSGDKSHPESETI 757
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 7/183 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELI--AEAISLFGEMMAHGFS 118
+++ Y G + +A +F+ M RD ++W +M+SGY Q EA+ LFG M+ G
Sbjct: 228 LVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGML 287
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ + A G L+ G+Q+HG+ K Y + + N L+S Y+KC + D+ +
Sbjct: 288 LDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAV 347
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +M+ R+ +SW ++I ++ ++++ M G+YP+ VTF+G+L A +V
Sbjct: 348 FQDMSARNVVSWTTLISIDEEN-----VVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMV 402
Query: 239 DKG 241
+G
Sbjct: 403 KEG 405
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 12/240 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y + A +F M R+ ++WT++IS +N +SLF M G P
Sbjct: 331 LISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISIDEEN-----VVSLFNAMRVDGVYPN 385
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ TF L A+ + +G +HG+ +K+ + + NSL++MYAK I +S +IF
Sbjct: 386 DVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFE 445
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD- 239
+ Y+ ISWN++I G + +G EA + + ++ + P+ TF VL A A A +
Sbjct: 446 ELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIK-EIKPNQYTFGSVLNAIAAAEDISL 504
Query: 240 KGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
K + +S + GL D ++ +++++ G+ G + +++ P E W ++
Sbjct: 505 KHGQRCHSHLIKLGLNT--DPFVAGALLDMYGKRGNINESQRVFNETP-EKTQFSWTGMI 561
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y AG+ A +F+ + D ++W +++SG+ + + A + F + F P+ T
Sbjct: 129 YCKAGRFELALCVFEGLSCPDIVSWNTILSGF-EKSVDALNFACFMHLNGVVFDPVTYTT 187
Query: 125 AVLFGAMGSVAYLDQ-----GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
A+ F Y D G QLH + VK + ++ + N+LV+MY++ G +D++ R+F
Sbjct: 188 ALSF--CWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVF 245
Query: 180 SNMAYRDKISWNSMIMGLSDHGRAS--EALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+ M RD +SWN+M+ G + G EA+ ++ M+ G+ D V+ G ++AC +
Sbjct: 246 NEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKN 305
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
++ F ++ + G+ ++++ N+L
Sbjct: 306 LE-----FGKQIHGLAQKLGYGTHVAVCNVL 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 7/195 (3%)
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF--SPLNGTFAVLFGAMGS 133
+LF+ +P ++ + + ++ L +A+S+F F + T A+ F A
Sbjct: 39 NLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACRG 98
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
L G Q+HG V T + + + NSL+ MY K G + + +F ++ D +SWN++
Sbjct: 99 EFIL--GAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTI 156
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
+ G ++ +AL M G+ D VT+ L+ C D LF ++S
Sbjct: 157 LSGFE---KSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLV 213
Query: 254 LQPGFDHYISIINLL 268
++ GF + I N L
Sbjct: 214 VKCGFGCEVFIGNAL 228
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 161/292 (55%), Gaps = 18/292 (6%)
Query: 81 MPDRDSIAWTSMISGYVQ----NELIA-EAISLFGEMMAHGFS---PLNGTFAVLFGAMG 132
MPDR+ + W +MI+GY NE A + LF EM+ G S P + T L A
Sbjct: 1 MPDRNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAAS 60
Query: 133 SVAYLDQGRQLHGMQVKTI--YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 190
+ ++ G LHG VK + E D+ + LV MY+KCG ++ + +F M +R+ ++W
Sbjct: 61 QLGMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVLTW 120
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
+M GL+ HGR EAL + M G+ P+ TF +L+AC HAGLV++G +LF M
Sbjct: 121 TAMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDMEG 180
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVA 310
+G+ P HY +++LLGR G + +A +F++ +P+ P+ IW +L+ C + D +
Sbjct: 181 KFGVVPWIQHYGCVVDLLGRNGNLNEAYDFIMEMPISPDTLIWRSLLSACRI-HGDVVMG 239
Query: 311 SRATKRLLELDPLN-------APGHVALCNIYAANDRHIELTSLRKEMRIKG 355
+ + LL+ + + +VAL N+YA+ R + +RK+M++KG
Sbjct: 240 EKVGRFLLKFKEKSSEELAHKSEDYVALSNVYASAGRWDVVEVVRKKMKVKG 291
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 173/327 (52%), Gaps = 5/327 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
MI+ Y ++ A +FD M R ++W S+++ V+N +++ I F +M F P
Sbjct: 152 MINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPD 211
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ +L + YL GR +H + + L +LV MY K G + + +F
Sbjct: 212 ETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVVFE 271
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF---GLYPDTVTFLGVLTACAHAGL 237
M R+ +W++MIMGL+ HG A EAL +++ M + + P+ VT+LGVL AC+HAG+
Sbjct: 272 RMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGM 331
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
VD+G+ F M +G++P HY +++++LGRAG + +A F+ +P P+ +W L+
Sbjct: 332 VDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLL 391
Query: 298 GVCGLSKT--DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
C + + + KRLLE++P V + N+YA + ++R+ MR G
Sbjct: 392 SACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYAEVGNWEKAANVRRVMRDGG 451
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRLEP 382
++K G S + + G ++ F +G P
Sbjct: 452 LKKMAGESCVDLGGSMYRFFAGHDSRP 478
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
I+W +I GY ++ E+I +F +M +G P T+ +F + L +G+Q+H
Sbjct: 77 ISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCEGKQVHAD 136
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
VK + D+ + N++++ Y C +I + ++F M R +SWNS++ ++ S+
Sbjct: 137 LVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDG 196
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ + M + PD + + +L+ CA G + G + + ++ G+ ++++
Sbjct: 197 IGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILK-GMVLSVHLGTALVD 255
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ G++G + A R+ + N W A++
Sbjct: 256 MYGKSGALGYARVVFERME-KRNVWTWSAMI 285
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 6/173 (3%)
Query: 33 GYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSM 92
GY+ G+ +Q + + + + T ++ Y +G + A +F+ M R+ W++M
Sbjct: 226 GYLSLGRWVHSQLILKGMVLSVHLG-TALVDMYGKSGALGYARVVFERMEKRNVWTWSAM 284
Query: 93 ISGYVQNELIAEAISLFGEM---MAHGFSPLNGTFAVLFGAMGSVAYLDQG-RQLHGMQV 148
I G Q+ EA+ LF M ++ SP T+ + A +D+G R M+
Sbjct: 285 IMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEF 344
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDH 200
+ ++ ++V + + G + ++YR +M + D I W +++ + H
Sbjct: 345 VHGIKPMMVHYGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLLSACTVH 397
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 170/320 (53%), Gaps = 7/320 (2%)
Query: 47 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 106
D +RN ++ Y G + A +F + D+D ++W S+ISGY Q+ EA+
Sbjct: 373 LDDTSLRNS-----LVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEAL 427
Query: 107 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVSM 165
LF M F P T + A SV G LHG +K + + + +L++
Sbjct: 428 DLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNF 487
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
YAKCG+ + +F M ++ ++W +MI G G +L ++ ML+ L P+ V F
Sbjct: 488 YAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVF 547
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+L AC+H+G+V++G +F+ M P HY +++LL RAG +++A +F+ ++P
Sbjct: 548 TTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMP 607
Query: 286 VEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELT 345
V+P ++GA + CGL ++ D A +R+LEL P A +V + N+YA++ R +
Sbjct: 608 VQPGVGVFGAFLHGCGL-HSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVK 666
Query: 346 SLRKEMRIKGVRKAPGCSWI 365
+R+ ++ +G+ K PG S +
Sbjct: 667 EVREMIKQRGLNKVPGVSLV 686
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 127/250 (50%), Gaps = 19/250 (7%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G++ A +FD +PDR ++WTSMI YVQNE E + LF M GF
Sbjct: 173 TSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRM-REGF- 230
Query: 119 PLNG---TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
L+G T L A + L QG+ +HG +K E + L SL++MY KCG+I D+
Sbjct: 231 -LDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDA 289
Query: 176 YRIFSNMAYR------DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
+F + D + W +MI+G + G AL ++ + + P++VT +L
Sbjct: 290 RSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLL 349
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVE 287
+ACA + G +L + +V YGL D + S++++ + G + DA +V V+
Sbjct: 350 SACAQLENIVMG-KLLHVLVVKYGLD---DTSLRNSLVDMYAKCGLIPDA-HYVFATTVD 404
Query: 288 PNHAIWGALV 297
+ W +++
Sbjct: 405 KDVVSWNSVI 414
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR------NKIAWTCMISGYLSAGQVFKACDLFDSM 81
S++N YV+ G + A+ +FD + + + WT MI GY
Sbjct: 274 TSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQ-------------- 319
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
GY Q A+ LF + + P + T A L A + + G+
Sbjct: 320 ------------RGYPQ-----AALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGK 362
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
LH + VK + D L NSLV MYAKCG I D++ +F+ +D +SWNS+I G + G
Sbjct: 363 LLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSG 421
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A EAL ++ M PD VT +GVL+ACA G G L + YGL +
Sbjct: 422 SAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSL-HGFALKYGLVSSSIYV 480
Query: 262 -ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+++N + G A V E N W A++G CG+
Sbjct: 481 GTALLNFYAKCGDATSA-RMVFDGMGEKNAVTWAAMIGGCGM 521
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF--GEMMAHG 116
T +IS Y S G + A LF +P ++ +I + N++ + +S +
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGS 131
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
F+ L F++L + + +LH +K+ +L SLV Y+KCG++ D+
Sbjct: 132 FNDLV-VFSILLKTASQLRDIVLTTKLHCNILKSNAADSFVL-TSLVDAYSKCGKLRDAR 189
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
++F + R +SW SMI+ + A E L ++ M E L + T ++TAC G
Sbjct: 190 KVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLG 249
Query: 237 LVDKG-WELFNSMVNSYGLQPGFD--HYI--SIINLLGRAGKVKDAEE 279
+ +G W V+ Y ++ G + Y+ S++N+ + G + DA
Sbjct: 250 CLHQGKW------VHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARS 291
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 178/314 (56%), Gaps = 4/314 (1%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+ + ++ Y Q+ A F + +D +W+S+I QN + ++A+ L EM
Sbjct: 445 RHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEM 504
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ G + + + + A + + +G+QLH +K+ Y D+ + +S++ MYAKCG I
Sbjct: 505 LDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNI 564
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
++S ++F +++++N++I G + HG+A +A+ V + + G+ P+ VTFL +++AC
Sbjct: 565 EESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSAC 624
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
+HAG V++ LF M++ Y ++P +HY +++ GRAG++++A + V + + + +
Sbjct: 625 SHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESA 681
Query: 293 WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
W L+ C + ++ + ++ +++EL+P + ++ L NIY E + RK+M
Sbjct: 682 WRTLLSACR-NHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMA 740
Query: 353 IKGVRKAPGCSWIL 366
V+K PG SW++
Sbjct: 741 KIRVKKDPGNSWLI 754
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Query: 53 RNKIAWTCMISGYLSAGQVFK-ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
R K A + ++ YL G + A +F + +RD +AW MISG+ QN LF E
Sbjct: 141 REKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSE 200
Query: 112 MMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
M G P TFA L + + L++ Q+HG+ K E D+++E+++V +YAKC
Sbjct: 201 MWEEQGLKPDRITFASL---LKCCSVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCR 257
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
++ +IF +M +D W+SMI G + + R EA+ ++ M + D L
Sbjct: 258 DVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLK 317
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
AC ++ G ++ M+ + F + ++NL G++ D E+ R+ + +
Sbjct: 318 ACVEIEDLNTGVQVHGLMIKNGHQNDCFVASV-LLNLYASFGELGDVEKLFSRID-DKDI 375
Query: 291 AIWGALV 297
W +++
Sbjct: 376 VAWNSMI 382
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y + A LFD MP+R+ + WT++IS +++ +++A +F M P
Sbjct: 48 LLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPN 107
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG-EIDDSYRIF 179
TFAVL A + G Q+HG+ V+ E + +SLV MY K G ++ D+ R+F
Sbjct: 108 ENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVF 167
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACA 233
+ RD ++WN MI G + +G ++ M E GL PD +TF +L C+
Sbjct: 168 YGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCS 222
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 158/331 (47%), Gaps = 27/331 (8%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISG-----YLSAGQVFKAC 75
D L+S + V+ L ++ + I+N C ++ Y S G++
Sbjct: 306 KLDQHVLSSTLKACVEIEDLNTGVQVHGLM-IKNGHQNDCFVASVLLNLYASFGELGDVE 364
Query: 76 DLFDSMPDRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGS 133
LF + D+D +AW SMI + + + LF E+ F + G T + +
Sbjct: 365 KLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEK 424
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ L GRQ+H + VK+ ++ N+LV MY++C +IDD+++ F ++ +D SW+S+
Sbjct: 425 DSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSI 484
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I + S+AL + + ML+ G+ + + ++AC+ + +G +L + +
Sbjct: 485 IGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQL-----HVFA 539
Query: 254 LQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSKTD 306
++ G+ D YI SII++ + G ++++E+ V ++PN + A++ G ++
Sbjct: 540 IKSGYSCDVYIGSSIIDMYAKCGNIEESEK-VFDEQLKPNEVTFNAIISGYAHHGKAQQA 598
Query: 307 ADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+V S+ K + AP HV + +A
Sbjct: 599 IEVLSKLEKNGV------APNHVTFLALMSA 623
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L Q Q+H + T Y L N+L+S Y+K ++++F M R+ ++W ++I
Sbjct: 23 LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISS 82
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
+G S+A ++ M P+ TF +L AC + L G ++ +V
Sbjct: 83 HLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLV 135
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 177/348 (50%), Gaps = 12/348 (3%)
Query: 19 LNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLF 78
L+ D L I+GYV L V I N+I I Y G V A ++F
Sbjct: 350 LSKLRDIRLVRSIHGYV----LRHMH--ITHVEIANQI-----IHAYAKFGYVVDAREVF 398
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ M RD ++WTSMI GYV + I +AI LF + S + T L A+ + L
Sbjct: 399 NRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLS 458
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
+++H + + DL + NSL++ YAKCG++ + IF M R SWN+MI +
Sbjct: 459 FIKEVHCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYA 518
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
HG +E L +++ M + PD VTF +LTAC+H+GLV++G ++F M+ Y + P
Sbjct: 519 MHGNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNE 578
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
HY I++LL RAG++++A V +P + A AL+ C L D ++ K++L
Sbjct: 579 VHYSCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYG-DTEIGEAIGKQIL 637
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 366
+L+P ++ + + NI A R E+ +R + + PG S L
Sbjct: 638 KLEPHSSGPYALVSNICAQGGRWDEVAQIRAMTKNTEFKSTPGYSACL 685
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 142/313 (45%), Gaps = 44/313 (14%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIA---------WTCMISGYLSAGQ------ 70
S N++I GY++ GQ +A ELF + RN + + C+ YL G
Sbjct: 207 SWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYM 266
Query: 71 -----------------------VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 107
+ KA LF+ + ++D++ + M++GY++N L EA++
Sbjct: 267 ITMGVELDLVASTALVDLYCKIDITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAVN 326
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
+F EM+ S F L A+ + + R +HG ++ ++ + + N ++ YA
Sbjct: 327 VFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHMHITHVEIANQIIHAYA 386
Query: 168 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
K G + D+ +F+ M RD +SW SMI G HG +A+ ++ + L D+VT +G
Sbjct: 387 KFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIG 446
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLP 285
+L A + G + E+ SY G D + S+I + GK+ A ++ +
Sbjct: 447 LLQALSQLGCLSFIKEVH---CFSYRFFHGKDLSVNNSLITTYAKCGKLCTA-RYIFQQM 502
Query: 286 VEPNHAIWGALVG 298
E W A++G
Sbjct: 503 TERCLTSWNAMIG 515
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 6/196 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN--ELIAEAISLFGEMMAHGFS 118
+I Y G++ A +FD + ++D A+TSMI+ Y + + A + M G
Sbjct: 73 LIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGHSGGSCVYGAFNTAFIMQQQGML 132
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYR 177
P T L A + L +G+ +HG V+ I D + E +L+ MY KCG + +
Sbjct: 133 PNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAAS 192
Query: 178 IFSNMAYRDKI---SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
+F+ M R SWN++I G +G+A EA ++ M+ + PD +T + C
Sbjct: 193 VFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVE 252
Query: 235 AGLVDKGWELFNSMVN 250
+ +G + M+
Sbjct: 253 LNYLRRGMSIHGYMIT 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 35 VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI---AWTS 91
++ GQ + + + + + T ++ Y G V A +F M R +W +
Sbjct: 151 LREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNA 210
Query: 92 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 151
+I+GY++N EA LF MM P T A + YL +G +HG +
Sbjct: 211 LIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYMITMG 270
Query: 152 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 211
E DL+ +LV +Y K +I + ++F + +D + +N M+ G ++G EA+ V+
Sbjct: 271 VELDLVASTALVDLYCKI-DITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFR 329
Query: 212 TMLEFGLYPDTVTFLGVLTA 231
M++ + FL +++A
Sbjct: 330 EMVKTNASTNVALFLNLISA 349