Miyakogusa Predicted Gene

Lj0g3v0320939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320939.1 Non Characterized Hit- tr|I1J6D5|I1J6D5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53942
PE,80.45,0,zf-C3HC4_3,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; ZF_RING_2,Zinc finger, RING-type; s,CUFF.21755.1
         (358 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g046250.1 | E3 ubiquitin-protein ligase BRE1-like protein ...   543   e-155
Medtr7g046250.2 | E3 ubiquitin-protein ligase BRE1-like protein ...   314   1e-85
Medtr5g085010.1 | E3 ubiquitin-protein ligase BRE1-like protein ...   216   3e-56
Medtr1g068830.1 | E3 ubiquitin-protein ligase BRE1-like protein ...   182   6e-46
Medtr1g068830.2 | E3 ubiquitin-protein ligase BRE1-like protein ...   182   6e-46
Medtr3g060950.1 | E3 ubiquitin-protein ligase BRE1-like protein,...    52   8e-07

>Medtr7g046250.1 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr7:16333806-16352752 | 20130731
          Length = 877

 Score =  543 bits (1400), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 267/356 (75%), Positives = 300/356 (84%)

Query: 3   VKDLRQTDKELKLFWEMFRRETIDSRDVMEARDAEYRAWAHVQSLKSSLDEHNLELRVKM 62
           V+DLR T+ E+KL   MFRRETIDSRDVMEAR+AEY AWAHVQ+LKSSLDEHNLELRVK 
Sbjct: 522 VQDLRVTEDEMKLILRMFRRETIDSRDVMEAREAEYIAWAHVQTLKSSLDEHNLELRVKT 581

Query: 63  ANEAEARSQQNLAAAEAEIADMRKKLEDSKREMLKLSDVLRSKNEENEAFLSEIETIGQA 122
           ANE+EARSQQ LAAAEAEIADMR  L+DSKR   K SDV+RSKNEENEA+LSEIETIGQA
Sbjct: 582 ANESEARSQQKLAAAEAEIADMRHNLDDSKRATCKQSDVMRSKNEENEAYLSEIETIGQA 641

Query: 123 YDDMQTQNQHLLQQITERDDYNIKLVLEGVRARQKQDSLIMEKRVIEQEIHQANVSLNLY 182
           YDDMQTQNQHLL QITERDDYNIKLVLEGVRARQKQDS IME R++EQE+ Q+NVSLNLY
Sbjct: 642 YDDMQTQNQHLLHQITERDDYNIKLVLEGVRARQKQDSFIMEMRLMEQEMQQSNVSLNLY 701

Query: 183 DVKAARIEDQLRHFSDQIQKLTEDKLQNSVTFENTQRRLADIRSSTQQVRDTVVEQQCKI 242
           + KAA+IEDQ+R  SDQIQKL ++KLQ+SV  ENTQRRL+DIR S+QQVR+TVVE Q KI
Sbjct: 702 NTKAAKIEDQMRFCSDQIQKLVDNKLQSSVDLENTQRRLSDIRPSSQQVRNTVVEVQSKI 761

Query: 243 SSSRVTYMELQXXXXXXXXXXXXXXXXXXVARRKFSRLKVQNEGSSLTEKLQQELGEYKE 302
           +SSRVT+MEL                   VARR FS LK Q+E SS T+KLQQELGEY++
Sbjct: 762 TSSRVTHMELLVDLEKERFAKKRVEKDLEVARRNFSHLKAQDEDSSETDKLQQELGEYRD 821

Query: 303 IIKCSICQDRTKEVVITKCYHLFCNTCMLKVTGSRHRKCPQCGTSFGANDVKPVYL 358
           I+KCSIC+DRTKEVVITKCYHLFCN+C+ K+ GSR RKCPQCG  FGANDVKPVYL
Sbjct: 822 IVKCSICRDRTKEVVITKCYHLFCNSCIQKIAGSRQRKCPQCGACFGANDVKPVYL 877


>Medtr7g046250.2 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr7:16333806-16352752 | 20130731
          Length = 715

 Score =  314 bits (804), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/191 (81%), Positives = 172/191 (90%)

Query: 3   VKDLRQTDKELKLFWEMFRRETIDSRDVMEARDAEYRAWAHVQSLKSSLDEHNLELRVKM 62
           V+DLR T+ E+KL   MFRRETIDSRDVMEAR+AEY AWAHVQ+LKSSLDEHNLELRVK 
Sbjct: 522 VQDLRVTEDEMKLILRMFRRETIDSRDVMEAREAEYIAWAHVQTLKSSLDEHNLELRVKT 581

Query: 63  ANEAEARSQQNLAAAEAEIADMRKKLEDSKREMLKLSDVLRSKNEENEAFLSEIETIGQA 122
           ANE+EARSQQ LAAAEAEIADMR  L+DSKR   K SDV+RSKNEENEA+LSEIETIGQA
Sbjct: 582 ANESEARSQQKLAAAEAEIADMRHNLDDSKRATCKQSDVMRSKNEENEAYLSEIETIGQA 641

Query: 123 YDDMQTQNQHLLQQITERDDYNIKLVLEGVRARQKQDSLIMEKRVIEQEIHQANVSLNLY 182
           YDDMQTQNQHLL QITERDDYNIKLVLEGVRARQKQDS IME R++EQE+ Q+NVSLNLY
Sbjct: 642 YDDMQTQNQHLLHQITERDDYNIKLVLEGVRARQKQDSFIMEMRLMEQEMQQSNVSLNLY 701

Query: 183 DVKAARIEDQL 193
           + KAA+IEDQ+
Sbjct: 702 NTKAAKIEDQV 712


>Medtr5g085010.1 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr5:36680874-36657703 | 20130731
          Length = 880

 Score =  216 bits (550), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 216/366 (59%), Gaps = 22/366 (6%)

Query: 3   VKDLRQTDKELKLFWEMFRRETIDSRDVMEARDAEYRAWAHVQSLKSSLDEHNLELRVKM 62
           ++ L++ ++EL+   +M+  E    + + E R++E +A +  + LK +LDEH LELRV+ 
Sbjct: 527 IEKLQEENQELEFVLDMYGLEDY-QKSLPEVRESESKAHSQAEMLKKALDEHGLELRVRA 585

Query: 63  ANEAEARSQQNLAAAEAEIADMRKKLEDSKREMLKLSDVLRSKNEENEAFLSEIETIGQA 122
           ANEAEA  +Q L+AAEAEI ++R +L+ ++R+ L++++ +++K  E E ++SEIETIGQA
Sbjct: 586 ANEAEAACEQRLSAAEAEIEELRAQLDANERKKLEMTEAIKAKEAEAETYISEIETIGQA 645

Query: 123 YDDMQTQNQHLLQQITERDDYNIKLVLEGVRARQKQDSLIMEKRVIEQEIHQANVSLNLY 182
           Y+DMQTQ+Q LLQQ+ ERDD NIKLV E ++A+    +L+ EK+    ++ + N  +   
Sbjct: 646 YEDMQTQHQRLLQQVAERDDCNIKLVSESMKAKHLHSTLLSEKQAFVDQLQKINSLIENS 705

Query: 183 DVKAARIEDQLRHFSDQIQKLTEDKLQNSVTFENTQRRLADIRSSTQQVRDTVVEQQCKI 242
             + A  E+Q++H   +  K T D+   +   E  +  LAD     + ++          
Sbjct: 706 KKRIANSEEQIKHILSEAAKCTHDEKHLAAALEFARWELADAEKELKLLKSVA------- 758

Query: 243 SSSRVTYMELQXXXXXXXXXXXXXXXXXXVARRKFSR--LKVQNEGSSL--------TEK 292
           S+S   Y ++Q                   +R+K     ++V N+ + L         ++
Sbjct: 759 SASEKEYEQIQKDVEAFEKELDSERS----SRKKLEEELMEVNNQITELNSDAKKTAVQQ 814

Query: 293 LQQELGEYKEIIKCSICQDRTKEVVITKCYHLFCNTCMLKVTGSRHRKCPQCGTSFGAND 352
           L++E+   K +IKC++C DR KEVVI KCYHLFCN C+ +    RHRKCP CGT+FG +D
Sbjct: 815 LEEEIRVCKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSD 874

Query: 353 VKPVYL 358
           V+ V +
Sbjct: 875 VRFVKI 880


>Medtr1g068830.1 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr1:29416497-29402918 | 20130731
          Length = 880

 Score =  182 bits (461), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 221/366 (60%), Gaps = 22/366 (6%)

Query: 3   VKDLRQTDKELKLFWEMFRRETIDSRDVMEARDAEYRAWAHVQSLKSSLDEHNLELRVKM 62
           ++ L++ ++EL+   +M+  E    + + E R++E +A +  + LK++LDEH LELRV+ 
Sbjct: 527 IEKLQEENRELEFVLDMYGLEDY-QKSLPEVRESERKARSQAEILKNALDEHGLELRVRA 585

Query: 63  ANEAEARSQQNLAAAEAEIADMRKKLEDSKREMLKLSDVLRSKNEENEAFLSEIETIGQA 122
           ANEAEA  +Q LAAAEAE+ ++R + ++++R+ L++++ ++ K  E + ++SEIETIGQA
Sbjct: 586 ANEAEAACEQRLAAAEAELEELRAQFDENERKNLEMTEAIKVKEAEAKTYISEIETIGQA 645

Query: 123 YDDMQTQNQHLLQQITERDDYNIKLVLEGVRARQKQDSLIMEKRVIEQEIHQANVSLNLY 182
           Y+DMQTQ+QHLLQQ+ ERDDYNIKLV E V+A+Q   +L+ EK+ +  ++ Q N  +   
Sbjct: 646 YEDMQTQHQHLLQQVAERDDYNIKLVSESVKAKQLHSTLLSEKQALADQLQQINSLIENS 705

Query: 183 DVKAARIEDQLRHFSDQIQKLTEDKLQNSVTFENTQRRLADIRSSTQQVRDTVVEQQCKI 242
            +K A  E+Q++    +  K T+++   +   E  +  LAD     + ++          
Sbjct: 706 KMKIANSEEQIKFILSEAAKCTQEEKHLAAALEFARWELADAEKELKLLKSVA------- 758

Query: 243 SSSRVTYMELQXXXXXXXXXXXXXXXXXXVARRKFSR--LKVQNEGSSL--------TEK 292
           S+S   Y ++Q                   +R+K     ++V N+ + L         ++
Sbjct: 759 SASEKEYDQIQKDVEACEKELDSERS----SRKKLEEELMQVNNQIAELNSEGRKTAVQQ 814

Query: 293 LQQELGEYKEIIKCSICQDRTKEVVITKCYHLFCNTCMLKVTGSRHRKCPQCGTSFGAND 352
           L++E+   K +IKC++C DR KEVVI KCYHLFCN C+ +    RHRKCP CGT+FG +D
Sbjct: 815 LEEEIRVCKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSD 874

Query: 353 VKPVYL 358
           V+ V +
Sbjct: 875 VRFVKI 880


>Medtr1g068830.2 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr1:29416388-29402918 | 20130731
          Length = 880

 Score =  182 bits (461), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 221/366 (60%), Gaps = 22/366 (6%)

Query: 3   VKDLRQTDKELKLFWEMFRRETIDSRDVMEARDAEYRAWAHVQSLKSSLDEHNLELRVKM 62
           ++ L++ ++EL+   +M+  E    + + E R++E +A +  + LK++LDEH LELRV+ 
Sbjct: 527 IEKLQEENRELEFVLDMYGLEDY-QKSLPEVRESERKARSQAEILKNALDEHGLELRVRA 585

Query: 63  ANEAEARSQQNLAAAEAEIADMRKKLEDSKREMLKLSDVLRSKNEENEAFLSEIETIGQA 122
           ANEAEA  +Q LAAAEAE+ ++R + ++++R+ L++++ ++ K  E + ++SEIETIGQA
Sbjct: 586 ANEAEAACEQRLAAAEAELEELRAQFDENERKNLEMTEAIKVKEAEAKTYISEIETIGQA 645

Query: 123 YDDMQTQNQHLLQQITERDDYNIKLVLEGVRARQKQDSLIMEKRVIEQEIHQANVSLNLY 182
           Y+DMQTQ+QHLLQQ+ ERDDYNIKLV E V+A+Q   +L+ EK+ +  ++ Q N  +   
Sbjct: 646 YEDMQTQHQHLLQQVAERDDYNIKLVSESVKAKQLHSTLLSEKQALADQLQQINSLIENS 705

Query: 183 DVKAARIEDQLRHFSDQIQKLTEDKLQNSVTFENTQRRLADIRSSTQQVRDTVVEQQCKI 242
            +K A  E+Q++    +  K T+++   +   E  +  LAD     + ++          
Sbjct: 706 KMKIANSEEQIKFILSEAAKCTQEEKHLAAALEFARWELADAEKELKLLKSVA------- 758

Query: 243 SSSRVTYMELQXXXXXXXXXXXXXXXXXXVARRKFSR--LKVQNEGSSL--------TEK 292
           S+S   Y ++Q                   +R+K     ++V N+ + L         ++
Sbjct: 759 SASEKEYDQIQKDVEACEKELDSERS----SRKKLEEELMQVNNQIAELNSEGRKTAVQQ 814

Query: 293 LQQELGEYKEIIKCSICQDRTKEVVITKCYHLFCNTCMLKVTGSRHRKCPQCGTSFGAND 352
           L++E+   K +IKC++C DR KEVVI KCYHLFCN C+ +    RHRKCP CGT+FG +D
Sbjct: 815 LEEEIRVCKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSD 874

Query: 353 VKPVYL 358
           V+ V +
Sbjct: 875 VRFVKI 880


>Medtr3g060950.1 | E3 ubiquitin-protein ligase BRE1-like protein,
           putative | LC | chr3:24203154-24205009 | 20130731
          Length = 218

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query: 301 KEIIKCSICQDRTKEVVITKCYHLFCNTCM 330
           K +IKC++  DR KEVVI KCYHLFCN C+
Sbjct: 160 KNMIKCTVFSDRPKEVVILKCYHLFCNPCI 189