Miyakogusa Predicted Gene

Lj0g3v0320689.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320689.2 Non Characterized Hit- tr|I3SL63|I3SL63_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,84.38,0.0000004,
,CUFF.21787.2
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g067450.1 | auxin influx transporter | HC | chr7:24625556-...    51   3e-07
Medtr5g082220.1 | auxin influx transporter | HC | chr5:35319940-...    50   3e-07
Medtr5g082220.2 | auxin influx transporter | HC | chr5:35319940-...    50   3e-07
Medtr5g082220.3 | auxin influx transporter | HC | chr5:35319940-...    50   4e-07

>Medtr7g067450.1 | auxin influx transporter | HC |
           chr7:24625556-24632290 | 20130731
          Length = 484

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 27/32 (84%)

Query: 36  ENAAEKLLFFIPNWTLMYIVNAFVAIWVLVVG 67
           +NAAEK  FF+P+WT MYI NAF+ IWVLVVG
Sbjct: 408 KNAAEKPPFFMPSWTAMYIFNAFIVIWVLVVG 439


>Medtr5g082220.1 | auxin influx transporter | HC |
           chr5:35319940-35326606 | 20130731
          Length = 479

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%)

Query: 36  ENAAEKLLFFIPNWTLMYIVNAFVAIWVLVVG 67
           +NAAEKL   IP+WTLMY++NAFV IWV +VG
Sbjct: 407 QNAAEKLPKVIPSWTLMYVINAFVVIWVTIVG 438


>Medtr5g082220.2 | auxin influx transporter | HC |
           chr5:35319940-35326606 | 20130731
          Length = 479

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%)

Query: 36  ENAAEKLLFFIPNWTLMYIVNAFVAIWVLVVG 67
           +NAAEKL   IP+WTLMY++NAFV IWV +VG
Sbjct: 407 QNAAEKLPKVIPSWTLMYVINAFVVIWVTIVG 438


>Medtr5g082220.3 | auxin influx transporter | HC |
           chr5:35319940-35326606 | 20130731
          Length = 469

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%)

Query: 36  ENAAEKLLFFIPNWTLMYIVNAFVAIWVLVVG 67
           +NAAEKL   IP+WTLMY++NAFV IWV +VG
Sbjct: 397 QNAAEKLPKVIPSWTLMYVINAFVVIWVTIVG 428