Miyakogusa Predicted Gene

Lj0g3v0320469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320469.1 Non Characterized Hit- tr|G8A042|G8A042_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,42.64,6e-17,seg,NULL,CUFF.21719.1
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079810.1 | hypothetical protein | HC | chr4:30894054-3089...    94   3e-20
Medtr4g079460.1 | hypothetical protein | HC | chr4:30718296-3071...    84   3e-17

>Medtr4g079810.1 | hypothetical protein | HC |
           chr4:30894054-30894856 | 20130731
          Length = 188

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 26/132 (19%)

Query: 1   MDLPRSTLCQSVSAFAAVSLDEAVADLGELNWQECCVTSVETLXXXXXXXXXXXXXXXLP 60
           +DLPRSTL +S+S FA ++++EAVADL +LNWQECCVTS++                  P
Sbjct: 80  VDLPRSTLSESISVFAVLTVEEAVADLSDLNWQECCVTSIQKF-------GCCEDRRSFP 132

Query: 61  TGVSSDQNLQLAIVQSHAHRTKRMGEIYGGLVLEASRRSMPAKKMVPKRKRSTT---YSA 117
             V  +Q      +QS +H           L+ E S+R + A K+VP+RKRS+    +S+
Sbjct: 133 ALVDQNQ------LQSQSH----------CLIPETSKRKLEATKLVPRRKRSSIQSLHSS 176

Query: 118 ASTVDSASLASC 129
           AS VDSASL SC
Sbjct: 177 ASIVDSASLVSC 188


>Medtr4g079460.1 | hypothetical protein | HC |
           chr4:30718296-30717095 | 20130731
          Length = 190

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 18/129 (13%)

Query: 1   MDLPRSTLCQSVSAFAAVSLDEAVADLGELNWQECCVTSVETLXXXXXXXXXXXXXXXLP 60
           +DLPRSTL +S+SAFA ++++EAVADL +LNWQECCVTS++                  P
Sbjct: 80  VDLPRSTLSESISAFAVLTVEEAVADLSDLNWQECCVTSIQKF-------GCCEDRRSFP 132

Query: 61  TGVSSDQNLQLAIVQSHAHRTKRMGEIYGGLVLEASRRSMPAKKMVPKRKRSTTYSAAST 120
              S DQN  +A  QSH+            L  E  +R + A K+VP+RKRS+  S  S+
Sbjct: 133 A--SMDQNPGVA-NQSHSQSR--------SLTPETFKRKLEAAKLVPRRKRSSIQSLQSS 181

Query: 121 VDSASLASC 129
           V     ASC
Sbjct: 182 VSIVDSASC 190