Miyakogusa Predicted Gene

Lj0g3v0320209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320209.1 Non Characterized Hit- tr|I1LIT8|I1LIT8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42357
PE,86.05,0,Putative anticodon-binding domain of alanyl-tRNA synthetase
(AlaRS),Alanine-tRNA ligase, class IIc, ,CUFF.21709.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g074640.1 | alanine-tRNA ligase | HC | chr4:28430949-28445...   291   2e-79
Medtr4g074670.2 | alanyl-tRNA synthetase | HC | chr4:28452943-28...   134   3e-32
Medtr4g074670.1 | alanyl-tRNA synthetase | HC | chr4:28452022-28...   134   6e-32
Medtr3g118360.1 | alanine-tRNA ligase | HC | chr3:55395797-55404...    68   4e-12
Medtr3g118360.2 | alanine-tRNA ligase | HC | chr3:55395877-55404...    68   4e-12
Medtr3g118360.3 | alanine-tRNA ligase | HC | chr3:55395877-55403...    68   4e-12
Medtr3g118360.4 | alanine-tRNA ligase | HC | chr3:55395797-55404...    68   4e-12

>Medtr4g074640.1 | alanine-tRNA ligase | HC | chr4:28430949-28445218
           | 20130731
          Length = 950

 Score =  291 bits (745), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 140/173 (80%), Positives = 157/173 (90%)

Query: 1   MGDVFTELKQQEAHIRDIIKEEEESFGRTLIKGIEKFESSVRHVQGKLLSGEEAFVLWDT 60
           +GDVF ELKQQE HIR++I+EEEESFGRTL+KGI KF+++V HVQG +LSGE AF LWDT
Sbjct: 362 LGDVFPELKQQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVGHVQGNILSGEVAFELWDT 421

Query: 61  FGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQTKQAGGAIVMDADATSALHKK 120
           +GFPLDLTQLMAEEK L VDVEGFNSAMEAARERSR AQ KQAGGAIVMDADATSAL K+
Sbjct: 422 YGFPLDLTQLMAEEKKLKVDVEGFNSAMEAARERSRTAQNKQAGGAIVMDADATSALQKR 481

Query: 121 GILPTDDSFKYVWFKDHQSVVKAIYTVSEFVDSVNTDGDIGVILESTSFYAEQ 173
            I+PTDDSFK+  F+DH++VVKAIYT SEFVDSVNTDGD+GVILESTSFYAEQ
Sbjct: 482 SIVPTDDSFKFASFRDHETVVKAIYTGSEFVDSVNTDGDVGVILESTSFYAEQ 534


>Medtr4g074670.2 | alanyl-tRNA synthetase | HC |
           chr4:28452943-28459496 | 20130731
          Length = 453

 Score =  134 bits (338), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 76/102 (74%)

Query: 1   MGDVFTELKQQEAHIRDIIKEEEESFGRTLIKGIEKFESSVRHVQGKLLSGEEAFVLWDT 60
           +GDVF ELKQ E  IR +I+ EEESF R L KGI KF  +V HVQG +LSGE  F L  T
Sbjct: 180 LGDVFPELKQNEERIRKMIQVEEESFSRNLFKGIRKFNKAVEHVQGNILSGEATFELSHT 239

Query: 61  FGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQTKQ 102
           FGFPLDLTQLMAEEK   VD+EGF+ AM+AARERS+ A  K+
Sbjct: 240 FGFPLDLTQLMAEEKKFSVDIEGFHRAMKAARERSKTAPKKK 281


>Medtr4g074670.1 | alanyl-tRNA synthetase | HC |
           chr4:28452022-28459826 | 20130731
          Length = 635

 Score =  134 bits (336), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 76/102 (74%)

Query: 1   MGDVFTELKQQEAHIRDIIKEEEESFGRTLIKGIEKFESSVRHVQGKLLSGEEAFVLWDT 60
           +GDVF ELKQ E  IR +I+ EEESF R L KGI KF  +V HVQG +LSGE  F L  T
Sbjct: 362 LGDVFPELKQNEERIRKMIQVEEESFSRNLFKGIRKFNKAVEHVQGNILSGEATFELSHT 421

Query: 61  FGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQTKQ 102
           FGFPLDLTQLMAEEK   VD+EGF+ AM+AARERS+ A  K+
Sbjct: 422 FGFPLDLTQLMAEEKKFSVDIEGFHRAMKAARERSKTAPKKK 463


>Medtr3g118360.1 | alanine-tRNA ligase | HC | chr3:55395797-55404715
           | 20130731
          Length = 980

 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 20/176 (11%)

Query: 7   ELKQQEAHIRDIIKEEEESFGRTLIKG--------IEKFESSVRHVQGKLLSGEEAFVLW 58
           ++K +   I + +K EE  F +TL +G        ++   S+ R      L+GE+ F+L+
Sbjct: 423 DVKNRAPRILEELKREELRFVQTLERGEKLLEEKLVDAITSAERSGTVPCLAGEDVFILY 482

Query: 59  DTFGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQT--KQAGGAIVMDADATSA 116
           DT+GFP+++T+ +AEE+G+ +D+ GF+  ME  R +S+ A    K A G+    AD    
Sbjct: 483 DTYGFPMEITKEVAEERGVSIDMNGFDIEMEKQRRQSQAAHNTVKLAIGSGTNIADNVPD 542

Query: 117 LHKKGILPTDDSFKYVWFKDHQSVVKAIYTVSEFVDSVNTDGDIGVILESTSFYAE 172
               G       ++ ++ K   ++V ++    +    V    ++ ++L  T FYAE
Sbjct: 543 TEFIG-------YESLYCK---AIVASLVVNGDPAVQVREGSNVEILLNKTPFYAE 588


>Medtr3g118360.2 | alanine-tRNA ligase | HC | chr3:55395877-55404591
           | 20130731
          Length = 871

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 20/176 (11%)

Query: 7   ELKQQEAHIRDIIKEEEESFGRTLIKG--------IEKFESSVRHVQGKLLSGEEAFVLW 58
           ++K +   I + +K EE  F +TL +G        ++   S+ R      L+GE+ F+L+
Sbjct: 423 DVKNRAPRILEELKREELRFVQTLERGEKLLEEKLVDAITSAERSGTVPCLAGEDVFILY 482

Query: 59  DTFGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQT--KQAGGAIVMDADATSA 116
           DT+GFP+++T+ +AEE+G+ +D+ GF+  ME  R +S+ A    K A G+    AD    
Sbjct: 483 DTYGFPMEITKEVAEERGVSIDMNGFDIEMEKQRRQSQAAHNTVKLAIGSGTNIADNVPD 542

Query: 117 LHKKGILPTDDSFKYVWFKDHQSVVKAIYTVSEFVDSVNTDGDIGVILESTSFYAE 172
               G       ++ ++ K   ++V ++    +    V    ++ ++L  T FYAE
Sbjct: 543 TEFIG-------YESLYCK---AIVASLVVNGDPAVQVREGSNVEILLNKTPFYAE 588


>Medtr3g118360.3 | alanine-tRNA ligase | HC | chr3:55395877-55403229
           | 20130731
          Length = 869

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 20/176 (11%)

Query: 7   ELKQQEAHIRDIIKEEEESFGRTLIKG--------IEKFESSVRHVQGKLLSGEEAFVLW 58
           ++K +   I + +K EE  F +TL +G        ++   S+ R      L+GE+ F+L+
Sbjct: 423 DVKNRAPRILEELKREELRFVQTLERGEKLLEEKLVDAITSAERSGTVPCLAGEDVFILY 482

Query: 59  DTFGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQT--KQAGGAIVMDADATSA 116
           DT+GFP+++T+ +AEE+G+ +D+ GF+  ME  R +S+ A    K A G+    AD    
Sbjct: 483 DTYGFPMEITKEVAEERGVSIDMNGFDIEMEKQRRQSQAAHNTVKLAIGSGTNIADNVPD 542

Query: 117 LHKKGILPTDDSFKYVWFKDHQSVVKAIYTVSEFVDSVNTDGDIGVILESTSFYAE 172
               G       ++ ++ K   ++V ++    +    V    ++ ++L  T FYAE
Sbjct: 543 TEFIG-------YESLYCK---AIVASLVVNGDPAVQVREGSNVEILLNKTPFYAE 588


>Medtr3g118360.4 | alanine-tRNA ligase | HC | chr3:55395797-55404715
           | 20130731
          Length = 702

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 24/179 (13%)

Query: 6   TELKQQEAHIRDIIKEEEESFGRTLIKG--------IEKFESSVRHVQGKLLSGEEAFVL 57
            ++K +   I + +K EE  F +TL +G        ++   S+ R      L+GE+ F+L
Sbjct: 144 ADVKNRAPRILEELKREELRFVQTLERGEKLLEEKLVDAITSAERSGTVPCLAGEDVFIL 203

Query: 58  WDTFGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQT--KQAGGAIVMDADATS 115
           +DT+GFP+++T+ +AEE+G+ +D+ GF+  ME  R +S+ A    K A G+    AD   
Sbjct: 204 YDTYGFPMEITKEVAEERGVSIDMNGFDIEMEKQRRQSQAAHNTVKLAIGSGTNIADN-- 261

Query: 116 ALHKKGILPTDDSFKY--VWFKDHQSVVKAIYTVSEFVDSVNTDGDIGVILESTSFYAE 172
                  +P  +   Y  ++ K   ++V ++    +    V    ++ ++L  T FYAE
Sbjct: 262 -------VPDTEFIGYESLYCK---AIVASLVVNGDPAVQVREGSNVEILLNKTPFYAE 310