Miyakogusa Predicted Gene

Lj0g3v0319999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0319999.1 Non Characterized Hit- tr|G7INX9|G7INX9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,68.18,0.00005,seg,NULL,CUFF.21679.1
         (76 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g012750.1 | BEST plant protein match is: (TAIR:plant.1) pr...    52   1e-07

>Medtr2g012750.1 | BEST plant protein match is: (TAIR:plant.1)
           protein, putative | HC | chr2:3273735-3275375 | 20130731
          Length = 265

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 36/44 (81%), Gaps = 3/44 (6%)

Query: 33  FEEQSKVEKPFHKAEEISEVS---NLSESVSTTTVTYKREEEEE 73
           F+ ++KVEKPF+K +EISEVS   +LSESVST T T KREEEEE
Sbjct: 74  FDRENKVEKPFYKVDEISEVSEVCSLSESVSTITFTDKREEEEE 117