Miyakogusa Predicted Gene
- Lj0g3v0319579.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0319579.2 Non Characterized Hit- tr|B9SM03|B9SM03_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,58.75,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF789,Protein of unknown function DUF789,CUFF.21658.2
(92 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g082450.1 | DUF789 family protein | HC | chr6:30867483-308... 145 7e-36
Medtr1g110070.1 | DUF789 family protein | HC | chr1:49637958-496... 91 3e-19
Medtr4g120990.1 | DUF789 family protein | HC | chr4:50085029-500... 84 2e-17
Medtr2g035080.1 | DUF789 family protein | HC | chr2:13476671-134... 77 4e-15
Medtr6g066280.1 | plant/F9H3-4 protein | HC | chr6:24650332-2465... 54 5e-08
Medtr1g087830.1 | DUF789 family protein | LC | chr1:39310095-393... 49 8e-07
Medtr2g090210.1 | plant/F9H3-4 protein | HC | chr2:38298031-3830... 49 1e-06
Medtr1g087810.1 | DUF789 family protein | LC | chr1:39301659-392... 48 2e-06
Medtr4g044297.2 | plant/F9H3-4 protein | HC | chr4:14861532-1485... 46 9e-06
Medtr4g044297.1 | plant/F9H3-4 protein | HC | chr4:14861145-1485... 46 9e-06
>Medtr6g082450.1 | DUF789 family protein | HC |
chr6:30867483-30862197 | 20130731
Length = 401
Score = 145 bits (366), Expect = 7e-36, Method: Composition-based stats.
Identities = 68/88 (77%), Positives = 77/88 (87%), Gaps = 4/88 (4%)
Query: 9 LHTPLTGNGGAQAPILL----MDGVAKISLPTFAMAAYKLKGSIWLQNGVSDNQVANSLL 64
LHTPLTGN GAQAP +L ++GV KISLPTFAMA+YKLKG IW+QNGVS NQ+ANSLL
Sbjct: 314 LHTPLTGNRGAQAPTMLYPNDINGVPKISLPTFAMASYKLKGPIWMQNGVSGNQLANSLL 373
Query: 65 QAADNWLRLHQVNHPDYRFFVTHGTYHK 92
QAADNWLRL QVNHPDY+FFV+HGTY +
Sbjct: 374 QAADNWLRLVQVNHPDYQFFVSHGTYRR 401
>Medtr1g110070.1 | DUF789 family protein | HC |
chr1:49637958-49633404 | 20130731
Length = 408
Score = 90.5 bits (223), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 9 LHTPLTGNGGAQAPI----LLMDGVAKISLPTFAMAAYKLKGSIWLQNGVSDNQVANSLL 64
L+TPL G+ A AP+ +DGV K+SLP F +A+YK KG +W +G + Q++NSLL
Sbjct: 327 LYTPLGGSQRAHAPVPSYPTEIDGVPKMSLPVFGLASYKFKGPLWTPSGGYERQLSNSLL 386
Query: 65 QAADNWLRLHQVNHPDYRFF 84
Q AD WLRL QV+HPD+ FF
Sbjct: 387 QNADKWLRLLQVSHPDFLFF 406
>Medtr4g120990.1 | DUF789 family protein | HC |
chr4:50085029-50090392 | 20130731
Length = 395
Score = 84.3 bits (207), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 27 DGVAKISLPTFAMAAYKLKGSIWLQNGVSDNQVANSLLQAADNWLRLHQVNHPDYRFFVT 86
D +K+SLP F +A +K K SIW +GVS++Q ANSL +AA+NWLRL QVNHPDY FF T
Sbjct: 330 DISSKLSLPIFGLAHHKFKISIWDPDGVSESQKANSLARAAENWLRLLQVNHPDYNFFTT 389
Query: 87 HGTYHK 92
H Y +
Sbjct: 390 HPIYSR 395
>Medtr2g035080.1 | DUF789 family protein | HC |
chr2:13476671-13471541 | 20130731
Length = 401
Score = 77.0 bits (188), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 5 LLTILHTPLTGNGGAQAPILLMDGVAKISLPTFAMAAYKLKGSIWLQNGVSDNQVANSLL 64
L T L +P T N + D +K+SLP F +A K K S+W G S++Q ANSL
Sbjct: 318 LSTPLQSPTTINCSRKDK----DISSKLSLPIFGLAFTKFKISVWDPEGDSEDQKANSLR 373
Query: 65 QAADNWLRLHQVNHPDYRFFVTHGTY 90
+AADNW+R QVNHPDY+FF T+ +Y
Sbjct: 374 RAADNWIRQLQVNHPDYKFFSTNYSY 399
>Medtr6g066280.1 | plant/F9H3-4 protein | HC |
chr6:24650332-24653230 | 20130731
Length = 329
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 32 ISLPTFAMAAYKLKGSIWLQNGVSDNQVANSLLQAADNWLRLHQVNHPDYRFFVT 86
ISLP F +A YK++ +WL +D + + L AAD+WL+ V+H D+ FF +
Sbjct: 271 ISLPPFGLATYKMQSDLWLNTDPNDYEKISYLCSAADSWLKQLNVHHHDFDFFTS 325
>Medtr1g087830.1 | DUF789 family protein | LC |
chr1:39310095-39307482 | 20130731
Length = 309
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 25 LMDGVAKISLPTFAMAAYKLKGSIWLQNGVSDNQVANSLLQAADNWLRLHQVN-HPDYRF 83
L D K+ +P F + Y L+GSI + + NSLL+AAD WL+ +V H DY F
Sbjct: 239 LQDESLKMPIPIFGITTYNLEGSILTLPKAAKSDEMNSLLKAADVWLKSLKVELHQDYNF 298
Query: 84 FVTHG 88
FV G
Sbjct: 299 FVKDG 303
>Medtr2g090210.1 | plant/F9H3-4 protein | HC |
chr2:38298031-38302273 | 20130731
Length = 314
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 32 ISLPTFAMAAYKLKG-SIWLQ-NGVSDNQVANSLLQAADNWLRLHQVNHPDYRFF--VTH 87
ISLP F +A YK++G ++W+ N D + SLL AD+WL+ +V H D+ +F + H
Sbjct: 254 ISLPAFGLATYKMQGGNVWIGGNRGRDQERLMSLLSVADSWLKQLRVQHHDFNYFMGIRH 313
Query: 88 G 88
G
Sbjct: 314 G 314
>Medtr1g087810.1 | DUF789 family protein | LC |
chr1:39301659-39299634 | 20130731
Length = 322
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 27 DGVAKISLPTFAMAAYKLKGSIWLQNGVSDNQVANSLLQAADNWL-RLHQVNHPDYRFFV 85
DG K+ LP F + KLK SI ++ N+LL+AAD+WL L+ V+H D+ FV
Sbjct: 250 DGPLKMPLPIFGLTTDKLKRSILAFPKARESTQLNTLLKAADDWLDSLNVVSHYDHNHFV 309
Query: 86 THG 88
HG
Sbjct: 310 RHG 312
>Medtr4g044297.2 | plant/F9H3-4 protein | HC |
chr4:14861532-14856514 | 20130731
Length = 306
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 32 ISLPTFAMAAYKLKGSIWLQNGVS-DNQVANSLLQAADNWLRLHQVNHPDYRFF--VTHG 88
ISL F +A YK++G++W+ D + SL AD+WL+ +V+H D+ +F + HG
Sbjct: 247 ISLQPFGLATYKMQGNLWVSGKCGRDQEKLVSLCSVADSWLKQLKVHHHDFNYFMGIRHG 306
>Medtr4g044297.1 | plant/F9H3-4 protein | HC |
chr4:14861145-14856487 | 20130731
Length = 306
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 32 ISLPTFAMAAYKLKGSIWLQNGVS-DNQVANSLLQAADNWLRLHQVNHPDYRFF--VTHG 88
ISL F +A YK++G++W+ D + SL AD+WL+ +V+H D+ +F + HG
Sbjct: 247 ISLQPFGLATYKMQGNLWVSGKCGRDQEKLVSLCSVADSWLKQLKVHHHDFNYFMGIRHG 306