Miyakogusa Predicted Gene

Lj0g3v0319409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0319409.1 Non Characterized Hit- tr|G7ZZG9|G7ZZG9_MEDTR
Calcium-binding protein, putative OS=Medicago truncatu,88,0.00002,
,CUFF.21639.1
         (49 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g023830.3 | endonuclease/exonuclease/phosphatase family pr...    54   3e-08
Medtr8g023830.2 | endonuclease/exonuclease/phosphatase family pr...    54   3e-08
Medtr8g023830.1 | endonuclease/exonuclease/phosphatase family pr...    54   3e-08

>Medtr8g023830.3 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr8:8682819-8686106 | 20130731
          Length = 358

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/26 (88%), Positives = 24/26 (92%)

Query: 24  GFDSSYDIANKYTDSYADAHKWFSHR 49
           GF SSYDIAN+YTDSYADAHKW SHR
Sbjct: 253 GFVSSYDIANQYTDSYADAHKWVSHR 278


>Medtr8g023830.2 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr8:8682819-8687402 | 20130731
          Length = 399

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/26 (88%), Positives = 24/26 (92%)

Query: 24  GFDSSYDIANKYTDSYADAHKWFSHR 49
           GF SSYDIAN+YTDSYADAHKW SHR
Sbjct: 253 GFVSSYDIANQYTDSYADAHKWVSHR 278


>Medtr8g023830.1 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr8:8682819-8687402 | 20130731
          Length = 466

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/26 (88%), Positives = 24/26 (92%)

Query: 24  GFDSSYDIANKYTDSYADAHKWFSHR 49
           GF SSYDIAN+YTDSYADAHKW SHR
Sbjct: 253 GFVSSYDIANQYTDSYADAHKWVSHR 278