Miyakogusa Predicted Gene

Lj0g3v0318879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318879.1 Non Characterized Hit- tr|I1MAL3|I1MAL3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4406
PE=,94.68,7.00649e-44,no description,NULL; Ufm1,Ubiquitin-fold
modifier 1; Ubiquitin-like,NULL; SUBFAMILY NOT NAMED,NULL;
,CUFF.21616.1
         (94 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g059210.1 | ubiquitin-fold modifier 1 | HC | chr5:24428099...   179   5e-46

>Medtr5g059210.1 | ubiquitin-fold modifier 1 | HC |
          chr5:24428099-24431035 | 20130731
          Length = 95

 Score =  179 bits (454), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 89/91 (97%), Positives = 89/91 (97%)

Query: 4  GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQ 63
          GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQ
Sbjct: 5  GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQ 64

Query: 64 QSAGNVFLKHGSELRLIPRDRVGASQMVRDV 94
          QSAGNVFLKHGSELRLIPRDRVGAS M RDV
Sbjct: 65 QSAGNVFLKHGSELRLIPRDRVGASDMFRDV 95