Miyakogusa Predicted Gene

Lj0g3v0318859.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318859.1 Non Characterized Hit- tr|D8SUQ7|D8SUQ7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,37.2,1e-17,A_DEAMIN_EDITASE,Adenosine deaminase/editase; RNA
BINDING / ADENOSINE DEAMINASE,NULL; EUKARYOTE SPEC,CUFF.21593.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g031440.1 | tRNA-specific adenosine deaminase | HC | chr8:...   279   1e-75

>Medtr8g031440.1 | tRNA-specific adenosine deaminase | HC |
           chr8:11790899-11796969 | 20130731
          Length = 406

 Score =  279 bits (713), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 132/161 (81%), Positives = 141/161 (87%)

Query: 5   FKFEDNLKRALYDHIRSMSNELTSPFLVSQPLFQAAPVPPKDFQQSESAANTLTCGYSIC 64
           F+FEDNLKRALYD I  + N LTSPFLV+QPLFQAAPVPP DF QSES+AN LTCGYSIC
Sbjct: 246 FQFEDNLKRALYDRIVHLENALTSPFLVNQPLFQAAPVPPNDFLQSESSANNLTCGYSIC 305

Query: 65  WNGCGLHEVILGTTGRKQGTSAKGALYPSSESSLCKKRLLEVFLSLRQGCLTTCLEKGIT 124
           WN CGLHEV LGTTGRKQGTSAKGALYPS+ESSLCKKRLLEVFL LR+  L   L+  IT
Sbjct: 306 WNECGLHEVTLGTTGRKQGTSAKGALYPSTESSLCKKRLLEVFLPLREEFLAKSLDDDIT 365

Query: 125 YRELKDGAEEYHLASKFFKGKPPFSNWFLKPLDCETFPISE 165
           YRELKDGAEEYHLASK FKGKPPFSNWF+KPLDCE FPIS+
Sbjct: 366 YRELKDGAEEYHLASKIFKGKPPFSNWFVKPLDCEAFPISK 406