Miyakogusa Predicted Gene

Lj0g3v0318519.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318519.2 Non Characterized Hit- tr|G7IHU0|G7IHU0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.1,0.000000002,seg,NULL,CUFF.21560.2
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g098830.1 | aleurone layer morphogenesis protein | LC | ch...    65   1e-11
Medtr2g098830.2 | aleurone layer morphogenesis protein | LC | ch...    65   1e-11
Medtr8g463810.1 | lipoxygenase | LC | chr8:22513639-22512401 | 2...    53   7e-08
Medtr4g067090.1 | hypothetical protein | HC | chr4:25276485-2528...    51   2e-07

>Medtr2g098830.1 | aleurone layer morphogenesis protein | LC |
            chr2:42304780-42316504 | 20130731
          Length = 1566

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 48/73 (65%), Gaps = 11/73 (15%)

Query: 4    LNQKENNGC---------KEARDMDVDNSLVLPSEDIEECQ-NIANNLQVIEYKEIENSS 53
            LNQKE NGC         KE  DMDVD SLVLPS++ +ECQ + AN L + E ++IEN S
Sbjct: 1267 LNQKEKNGCGITKRCDSVKEDWDMDVDKSLVLPSKN-KECQKHTANTLHISEDQKIENPS 1325

Query: 54   VQHYSNGSTSPFK 66
            VQH+SN  T P K
Sbjct: 1326 VQHHSNECTRPSK 1338



 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 26/102 (25%)

Query: 4   LNQKENNGC---------KEARDMDVDNSLVLPSEDIEECQ-NIANNLQVIEYKEIENSS 53
           L+QKEN+ C         KE +DMDVDN    PS+  EE Q ++AN LQV E ++IENSS
Sbjct: 776 LDQKENSCCGKITRCSSVKEDQDMDVDNCSTFPSKLNEEYQKHVANTLQVNEDQKIENSS 835

Query: 54  VQHYSNGSTSPFKCLSSLIQLHGIGLEAKKVDS--MIIAEGG 93
           VQH+SN  T P               EA+KV S  M I EGG
Sbjct: 836 VQHHSNECTRPS--------------EAEKVVSTRMHIIEGG 863


>Medtr2g098830.2 | aleurone layer morphogenesis protein | LC |
            chr2:42307950-42316489 | 20130731
          Length = 1299

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 48/73 (65%), Gaps = 11/73 (15%)

Query: 4    LNQKENNGC---------KEARDMDVDNSLVLPSEDIEECQ-NIANNLQVIEYKEIENSS 53
            LNQKE NGC         KE  DMDVD SLVLPS++ +ECQ + AN L + E ++IEN S
Sbjct: 1000 LNQKEKNGCGITKRCDSVKEDWDMDVDKSLVLPSKN-KECQKHTANTLHISEDQKIENPS 1058

Query: 54   VQHYSNGSTSPFK 66
            VQH+SN  T P K
Sbjct: 1059 VQHHSNECTRPSK 1071



 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 26/102 (25%)

Query: 4   LNQKENNGC---------KEARDMDVDNSLVLPSEDIEECQ-NIANNLQVIEYKEIENSS 53
           L+QKEN+ C         KE +DMDVDN    PS+  EE Q ++AN LQV E ++IENSS
Sbjct: 509 LDQKENSCCGKITRCSSVKEDQDMDVDNCSTFPSKLNEEYQKHVANTLQVNEDQKIENSS 568

Query: 54  VQHYSNGSTSPFKCLSSLIQLHGIGLEAKKVDS--MIIAEGG 93
           VQH+SN  T P               EA+KV S  M I EGG
Sbjct: 569 VQHHSNECTRPS--------------EAEKVVSTRMHIIEGG 596


>Medtr8g463810.1 | lipoxygenase | LC | chr8:22513639-22512401 |
          20130731
          Length = 412

 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 11/62 (17%)

Query: 4  LNQKENNGC---------KEARDMDVDNSLVLPSEDIEECQ-NIANNLQVIEYKEIENSS 53
          +N+KENNGC         KE  DMDV+ SLVLPS++ +ECQ + AN LQV E ++IEN S
Sbjct: 33 VNEKENNGCGIITQCNSVKEDWDMDVNKSLVLPSKN-KECQKHTANTLQVTEDQKIENLS 91

Query: 54 VQ 55
           Q
Sbjct: 92 TQ 93


>Medtr4g067090.1 | hypothetical protein | HC |
           chr4:25276485-25286044 | 20130731
          Length = 646

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 25/99 (25%)

Query: 6   QKENNG-CK--------EARDMDVDNSLVLPSEDIEECQNIANNLQVIEYKEIENSSVQH 56
           QKENNG C         E  +MDV+ S + PS++ E+CQ I N +Q  E++E  N SVQ 
Sbjct: 361 QKENNGSCTLRPCDSIMETHEMDVNKSSIYPSQNKEKCQKITNAMQFGEHQEKNNPSVQF 420

Query: 57  YSNGSTSPFKCLSSLIQLHGIGLEAKKVDS--MIIAEGG 93
            SNGS +               ++A K+DS  M+  +GG
Sbjct: 421 KSNGSAN--------------AIQAMKIDSTRMLNGKGG 445