Miyakogusa Predicted Gene

Lj0g3v0318419.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318419.1 Non Characterized Hit- tr|I3SYT8|I3SYT8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.54,0,LigB,Extradiol ring-cleavage dioxygenase, class III
enzyme, subunit B; no description,Extradiol
ring,NODE_34778_length_1006_cov_48.422466.path2.1
         (236 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077030.1 | 4,5-DOPA dioxygenase extradiol-like protein | ...   378   e-105
Medtr6g064960.1 | 4,5-DOPA dioxygenase extradiol-like protein | ...   330   6e-91
Medtr6g036660.1 | aromatic ring-opening dioxygenase, catalytic p...   227   8e-60

>Medtr1g077030.1 | 4,5-DOPA dioxygenase extradiol-like protein | HC
           | chr1:34375514-34373672 | 20130731
          Length = 265

 Score =  378 bits (971), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 175/217 (80%), Positives = 198/217 (91%)

Query: 19  WDTHVPTVNAVDRNDTIYDFYGFPKNMYKLKYPAPGAPHLAKRVKELLTASGFSRVDEDR 78
           WDT VPTVN V+ N+TI+DF GFP++MYKLKYPAPGAP LAKRVKEL+ ASG SRVDED+
Sbjct: 49  WDTSVPTVNVVNHNETIHDFGGFPRSMYKLKYPAPGAPKLAKRVKELIEASGLSRVDEDK 108

Query: 79  KRGLDHGAWVPLMLMYPDADIPVCQLSVSSSMGGTYHYEMGKALAPLKDEGVLIIGSGSA 138
           KRGLDHG WVPLMLMYP+ADIPVCQLSVSS+  GTYHY +GKA+APLKDEGVLIIGSGSA
Sbjct: 109 KRGLDHGTWVPLMLMYPEADIPVCQLSVSSNRNGTYHYNLGKAIAPLKDEGVLIIGSGSA 168

Query: 139 THNLRAIGPRNSPPPPWAVDFMSWLKSSLLHGRYEEVNQYEEKAPYAKMAHPWPDHFFPL 198
           THN+RAIGPR SPPPPWA+ F SWLK SL+ GRYE++N YEEKAPYAK+AHPWPDHFFPL
Sbjct: 169 THNMRAIGPRESPPPPWALAFDSWLKESLVEGRYEDINHYEEKAPYAKVAHPWPDHFFPL 228

Query: 199 HVAMGAAGENAKAKVVHDSWDGGSISYASFGFTADNT 235
           HVAMGAAGEN+KAKV+H+SWDGG+ SYASFGFTA ++
Sbjct: 229 HVAMGAAGENSKAKVIHESWDGGAFSYASFGFTAASS 265


>Medtr6g064960.1 | 4,5-DOPA dioxygenase extradiol-like protein | HC
           | chr6:24061806-24058028 | 20130731
          Length = 266

 Score =  330 bits (846), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 157/218 (72%), Positives = 186/218 (85%), Gaps = 2/218 (0%)

Query: 19  WDTHVPTVNAVDR-NDTIYDFYGFPKNMYKLKYPAPGAPHLAKRVKELLTASGFSRVDED 77
           WDT VPTVN +   NDTI+DFYGFPK MY+LKYPAPGAP LAKRVKELL  SGF RVDED
Sbjct: 50  WDTTVPTVNVIQTTNDTIHDFYGFPKPMYQLKYPAPGAPELAKRVKELLNKSGFDRVDED 109

Query: 78  RKRGLDHGAWVPLMLMYPDADIPVCQLSVSSSMGGTYHYEMGKALAPLKDEGVLIIGSGS 137
           +KRGLDHGAWVPLMLMYP+ADIPVCQLSV S + GTYHY +GKALAPLKDEGVLI+GSGS
Sbjct: 110 KKRGLDHGAWVPLMLMYPEADIPVCQLSVQSDLDGTYHYNLGKALAPLKDEGVLIMGSGS 169

Query: 138 ATHNLRAIGPRNSPPPPWAVDFMSWLKSSLLHGRYEEVNQYEEKAPYAKMAHPWPDHFFP 197
           A HNL  + PR +   PWA++F +WLK +LL GRYE+VN YE+KAP+AK AHP PDHF+P
Sbjct: 170 AVHNLGTLNPR-AGVAPWALEFDNWLKDALLDGRYEDVNHYEQKAPHAKKAHPHPDHFYP 228

Query: 198 LHVAMGAAGENAKAKVVHDSWDGGSISYASFGFTADNT 235
           LHVA+GAAGEN+KAK++H S + G++SYAS+ FT+D++
Sbjct: 229 LHVAIGAAGENSKAKLIHSSINLGTLSYASYQFTSDSS 266


>Medtr6g036660.1 | aromatic ring-opening dioxygenase, catalytic
           protein | HC | chr6:12850773-12851611 | 20130731
          Length = 169

 Score =  227 bits (578), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 118/191 (61%), Positives = 136/191 (71%), Gaps = 31/191 (16%)

Query: 46  YKLKYPAPGAPHLAKRVKELLTASGFSRVDEDRKRGLDHGAWVPLMLMYPDADIPVCQLS 105
           ++LKYPAPGAP LAKRVKE + ASG S                              QLS
Sbjct: 9   WQLKYPAPGAPKLAKRVKEQIEASGLS------------------------------QLS 38

Query: 106 VSSSMGGTYHYEMGKALAPLKDEGVLIIGSGSATHNLRAIGPRNSPPPPWAVDFMSWLKS 165
           +SS   GTYHY +GKALAPLKDE VLI+GS +ATHN   I PR SPP PWAV+FMSWLK+
Sbjct: 39  ISSDRNGTYHYNLGKALAPLKDESVLILGSENATHNKTVIAPRESPPFPWAVEFMSWLKN 98

Query: 166 SLLHGRYEEVNQYEEKAPYAKMAHP-WPDHFFPLHVAMGAAGENAKAKVVHDSWDGGSIS 224
           SL+ G+Y+EVN YEEKAPYAK+AHP  P+H FPL+VAMGAAGEN+KAKV+HDSWD GS+S
Sbjct: 99  SLIEGKYDEVNHYEEKAPYAKLAHPHRPEHMFPLNVAMGAAGENSKAKVIHDSWDLGSLS 158

Query: 225 YASFGFTADNT 235
           Y SFGFTA  T
Sbjct: 159 YVSFGFTAACT 169