Miyakogusa Predicted Gene

Lj0g3v0317369.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0317369.1 Non Characterized Hit- tr|F4L1J3|F4L1J3_HALH1
Putative uncharacterized protein OS=Haliscomenobacter
,33.78,4e-18,MoCo carrier protein-like,NULL; no description,NULL;
Lysine_decarbox,Cytokinin riboside 5'-monophosp,CUFF.21498.1
         (303 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g055920.1 | lysine decarboxylase family protein | HC | chr...   484   e-137
Medtr1g057020.1 | lysine decarboxylase family protein | HC | chr...    54   2e-07

>Medtr3g055920.1 | lysine decarboxylase family protein | HC |
           chr3:22202867-22206617 | 20130731
          Length = 312

 Score =  484 bits (1246), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/311 (78%), Positives = 265/311 (85%), Gaps = 8/311 (2%)

Query: 1   MGFSVAASLGSHIVLRETHENR-IKCR--LFCKREH--SSVGFKFSKRKANQRAVFLSK- 54
           M FS   S    ++    H+NR I C   LF   +H  +SVGF  SK KAN R++F+SK 
Sbjct: 2   MQFSTFGSSDFVLIKPTHHQNRLINCSKLLFSSTQHKNNSVGFNLSKHKANHRSIFVSKS 61

Query: 55  -QESVDLDERKSPNEVREEIKQCYELINRLGRGALYLGSSRMGPGHSHYLQAKELAKEIA 113
            QES + DERKSPNEV+EEIKQCYELINRLGRG +YLGSSRMG  HSHY+QA+ELAKEIA
Sbjct: 62  KQESFEFDERKSPNEVKEEIKQCYELINRLGRGIVYLGSSRMGSSHSHYVQAQELAKEIA 121

Query: 114 NLLDCTTWSGAGPGLMDAVTQGALLAGKPIGGFKIGKEAGEWTASNFHPYLPSGNYLTCR 173
           NLLD TTWSGAGPGLMDAVTQGALLAGKP+GGFKIG+EAGEWTASNFHPYLPS NYLTCR
Sbjct: 122 NLLDSTTWSGAGPGLMDAVTQGALLAGKPVGGFKIGREAGEWTASNFHPYLPSENYLTCR 181

Query: 174 FFSARKHGLVDAVVRSNSSDKTAVVALPGGVGTLDELFEILALIQLERIGSKLPVPFLLM 233
           FFSARKHGLVDAVVR+NS DKTAVVALPGG+GTLDELFE+LALIQLERIGSKLPVPFLLM
Sbjct: 182 FFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDELFEMLALIQLERIGSKLPVPFLLM 241

Query: 234 NYDSFYSKLLDFLNVCEDWGTVSKGEVASLWKVCNSNSEALAYLADFYCISSSDTSQNV- 292
           NYDSFYSKLLDFL+VCED GTVSKGEVASLWKVCNSNSEALAYLADFYCISS D SQ   
Sbjct: 242 NYDSFYSKLLDFLDVCEDRGTVSKGEVASLWKVCNSNSEALAYLADFYCISSGDISQKKE 301

Query: 293 TELYSNHESAS 303
           T+L S H+  S
Sbjct: 302 TKLQSTHDLPS 312


>Medtr1g057020.1 | lysine decarboxylase family protein | HC |
           chr1:25029449-25024296 | 20130731
          Length = 213

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 18/179 (10%)

Query: 78  ELINRLGRGALYLGSSRMGPGHSHYLQAKELAKEIANLLDCTTWSGAGPGLMDAVTQGAL 137
           E  ++  R  +Y GSS  G   ++   A EL KE+        + G   GLM  V+Q   
Sbjct: 3   ETKSKFKRICVYCGSSS-GNKPTYQEAAVELGKEMVERRIDLVYGGGSVGLMGLVSQAVH 61

Query: 138 LAGKPIGGFKIGKEAGEWTASNFHPYLPSGNYLTCRFFSARKHGLVDAVVRSNSSDKTAV 197
             G+ + G             +  P   +G+ +      +  H     + R       A 
Sbjct: 62  DGGRHVLGV---------IPRSLMPREITGDPIGEVRAVSDMHQRKAEMARQAD----AF 108

Query: 198 VALPGGVGTLDELFEILALIQLERIGSKLPVPFLLMNYDSFYSKLLDFLNVCEDWGTVS 256
           +ALPGG GTL+EL EI+   QL  I SK   P  L+N D FY+ LL F++   D G +S
Sbjct: 109 IALPGGYGTLEELLEIITWAQL-GIHSK---PVGLLNVDGFYNSLLCFIDKAVDEGFIS 163