Miyakogusa Predicted Gene

Lj0g3v0316049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0316049.1 Non Characterized Hit- tr|I3S2N8|I3S2N8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,61.84,3e-18,no
description,NULL,CUFF.21356.1
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g087280.1 | hypothetical protein | HC | chr3:39572058-3957...   186   7e-48
Medtr3g087270.1 | hypothetical protein | HC | chr3:39561892-3956...   185   2e-47
Medtr3g087325.1 | C2 domain protein | HC | chr3:39581231-3958207...   179   1e-45
Medtr3g087278.1 | C2 domain protein | HC | chr3:39569238-3956832...   179   1e-45
Medtr3g087330.1 | hypothetical protein | HC | chr3:39584994-3958...   174   3e-44
Medtr3g087275.1 | C2 domain protein | HC | chr3:39567138-3956522...   173   6e-44
Medtr3g087300.1 | hypothetical protein | HC | chr3:39574685-3957...   113   8e-26

>Medtr3g087280.1 | hypothetical protein | HC |
           chr3:39572058-39571164 | 20130731
          Length = 199

 Score =  186 bits (472), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 92/156 (58%), Positives = 117/156 (75%), Gaps = 13/156 (8%)

Query: 2   VSSKSNPFWNESFSLDCSCPEEFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRG 61
           VS+KS PFW+ESF+LDCSCP+EF E L ++SLVLELRQ         R+I+G S+L+G+G
Sbjct: 54  VSTKSVPFWDESFNLDCSCPQEFLENLNQQSLVLELRQ---------RKIWG-SQLIGKG 103

Query: 62  GIPWKTILESQNMEFKEWVKIDSCDGDSST--TFSVPEVQVEIKIKVVAS-EKKDNSSKR 118
            IPWK ILE+QNME K+W+K+D   G       FS PEV+VEIKI+V +  E +  + +R
Sbjct: 104 DIPWKVILEAQNMELKKWLKMDLVSGSECKEGMFSTPEVEVEIKIRVASVVEMEKQNKRR 163

Query: 119 LNKWNECGCKHGHDHHAWCSAEDYHVFSFGAALEAF 154
           LN WNECGCK+GHDH AWCSAE+  +F+FGAALEAF
Sbjct: 164 LNNWNECGCKNGHDHQAWCSAEECDIFAFGAALEAF 199


>Medtr3g087270.1 | hypothetical protein | HC |
           chr3:39561892-39560915 | 20130731
          Length = 199

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/156 (58%), Positives = 115/156 (73%), Gaps = 13/156 (8%)

Query: 2   VSSKSNPFWNESFSLDCSCPEEFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRG 61
           +S+KS PFW+ESF+LDCSCP+EF E L +++LVLELRQ         R+I+G S+L+G+G
Sbjct: 54  ISTKSVPFWDESFNLDCSCPQEFLENLNQQNLVLELRQ---------RKIWG-SQLIGKG 103

Query: 62  GIPWKTILESQNMEFKEWVKIDSCDGDS--STTFSVPEVQVEIKIKVVA-SEKKDNSSKR 118
            IPWK ILESQNME K+W+KI    G       F  PEV+VEIKI+V + +E +  + +R
Sbjct: 104 EIPWKVILESQNMELKKWLKIYLVSGSDCKEAMFPTPEVEVEIKIRVTSVAEMEKKNKRR 163

Query: 119 LNKWNECGCKHGHDHHAWCSAEDYHVFSFGAALEAF 154
           LN WNECGCK+GHDHHAWCSAED  +F  GAALEAF
Sbjct: 164 LNNWNECGCKNGHDHHAWCSAEDCDIFVLGAALEAF 199


>Medtr3g087325.1 | C2 domain protein | HC | chr3:39581231-39582072 |
           20130731
          Length = 199

 Score =  179 bits (454), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 90/156 (57%), Positives = 114/156 (73%), Gaps = 13/156 (8%)

Query: 2   VSSKSNPFWNESFSLDCSCPEEFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRG 61
           VS+KS PFW+ESF+LDCSCP+EF E L ++SL +ELRQ         R+I+G S+L+G+ 
Sbjct: 54  VSTKSVPFWDESFNLDCSCPQEFLENLNQQSLEVELRQ---------RKIWG-SQLIGKF 103

Query: 62  GIPWKTILESQNMEFKEWVKIDSCDGDSST--TFSVPEVQVEIKIKVVA-SEKKDNSSKR 118
            IPWK ILESQNME K+W+K+D   G       F+ PEV+VEIKIKV + SE +  + +R
Sbjct: 104 EIPWKVILESQNMELKKWLKMDLVSGSDYKEGMFTTPEVEVEIKIKVASVSEMETQNKRR 163

Query: 119 LNKWNECGCKHGHDHHAWCSAEDYHVFSFGAALEAF 154
           LN WNECGCK+GHDH AWC AED  +F+ GAALEAF
Sbjct: 164 LNNWNECGCKNGHDHRAWCCAEDCDIFALGAALEAF 199


>Medtr3g087278.1 | C2 domain protein | HC | chr3:39569238-39568320 |
           20130731
          Length = 199

 Score =  179 bits (454), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/156 (57%), Positives = 113/156 (72%), Gaps = 13/156 (8%)

Query: 2   VSSKSNPFWNESFSLDCSCPEEFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRG 61
           VS+KS PFW+ESF+LDCSCP+EF E L ++SL +ELRQ          R   GS+L+G+G
Sbjct: 54  VSTKSVPFWDESFNLDCSCPQEFLENLNQQSLEVELRQ----------RKMWGSQLIGKG 103

Query: 62  GIPWKTILESQNMEFKEWVKID--SCDGDSSTTFSVPEVQVEIKIKVVA-SEKKDNSSKR 118
            IPWK ILESQNME K+W+K+D  S        F  PEV+VEIKI+V + +E +  + +R
Sbjct: 104 EIPWKVILESQNMELKKWLKMDLVSRSDCKEAMFPTPEVEVEIKIRVASVAEMEKKNKRR 163

Query: 119 LNKWNECGCKHGHDHHAWCSAEDYHVFSFGAALEAF 154
           LN WNECGCK+GHDH+AWCSAED  +F+ GAALEAF
Sbjct: 164 LNNWNECGCKNGHDHNAWCSAEDCDLFALGAALEAF 199


>Medtr3g087330.1 | hypothetical protein | HC |
           chr3:39584994-39585593 | 20130731
          Length = 199

 Score =  174 bits (441), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 85/156 (54%), Positives = 111/156 (71%), Gaps = 13/156 (8%)

Query: 2   VSSKSNPFWNESFSLDCSCPEEFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRG 61
           +S+KS PFWNESF+LDCSCP+EF + L ++SLV+ELRQ          R   GS+L+G+G
Sbjct: 54  ISTKSLPFWNESFNLDCSCPQEFLDNLNQQSLVVELRQ----------RKMWGSQLIGKG 103

Query: 62  GIPWKTILESQNMEFKEWVKIDSCDGDSST--TFSVPEVQVEIKIKVVASEKKDNSSK-R 118
            IPWK ILESQNME K+W+K++   G       F+  EV+VEIKIKV +  + +N +K R
Sbjct: 104 EIPWKVILESQNMELKKWLKMEFVSGSDCKEGMFTTTEVEVEIKIKVPSVAEMENKNKWR 163

Query: 119 LNKWNECGCKHGHDHHAWCSAEDYHVFSFGAALEAF 154
           LN WNECGCK+GH+H AWC+ ED  +F+ G ALEAF
Sbjct: 164 LNNWNECGCKNGHNHQAWCNTEDCDIFALGGALEAF 199


>Medtr3g087275.1 | C2 domain protein | HC | chr3:39567138-39565221 |
           20130731
          Length = 198

 Score =  173 bits (438), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 88/156 (56%), Positives = 112/156 (71%), Gaps = 14/156 (8%)

Query: 2   VSSKSNPFWNESFSLDCSCPEEFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRG 61
           VS+KS PFW+ESF+LDCSCP+EF E L ++SLVLELRQ          R   GS+L+G+ 
Sbjct: 54  VSTKSVPFWDESFNLDCSCPQEFLENLNQQSLVLELRQ----------RKMWGSQLIGKC 103

Query: 62  GIPWKTILESQNMEFKEWVKIDSCDGDS--STTFSVPEVQVEIKIKVVA-SEKKDNSSKR 118
            IPWK ILES+NME K+W+K+D   G       F  PEV+VEIKIKV + +E +  +++R
Sbjct: 104 EIPWKVILESKNMELKKWLKMDLVSGSDFKEGMFITPEVEVEIKIKVASVAEMEKQNNRR 163

Query: 119 LNKWNECGCKHGHDHHAWCSAEDYHVFSFGAALEAF 154
           LN WNECGCK+GHDH AWC AE+  +F+FG ALEAF
Sbjct: 164 LNNWNECGCKNGHDHRAWCCAEECDIFAFG-ALEAF 198


>Medtr3g087300.1 | hypothetical protein | HC |
           chr3:39574685-39576292 | 20130731
          Length = 208

 Score =  113 bits (282), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 79/130 (60%), Gaps = 27/130 (20%)

Query: 23  EFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRGGIPWKTILESQNMEFKEWVKI 82
           EF   + ++SLVLELRQ          R   GS+L+G+G IPWK ILESQNME K+W+K+
Sbjct: 51  EFL--VNQQSLVLELRQ----------RKMWGSQLIGKGEIPWKVILESQNMELKKWLKM 98

Query: 83  DSCDGDSSTTFSVPEVQVEIKIKVVASEKKDNSSKRLNKWNECGCKHGHDHHAWCSAEDY 142
           D   G  S   SV E++ + K             +RLN WN+CGCK+GHDH AWC+ ED 
Sbjct: 99  DLLSG--SDLASVAEMEKQNK-------------RRLNNWNKCGCKNGHDHRAWCNTEDC 143

Query: 143 HVFSFGAALE 152
            +F+ G ALE
Sbjct: 144 DIFALGGALE 153