Miyakogusa Predicted Gene
- Lj0g3v0315899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0315899.1 tr|Q9S843|Q9S843_ARATH At1g70640 OS=Arabidopsis
thaliana GN=F24J13.21 PE=2 SV=1,42.96,1e-18,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; CAD & PB1 domains,NULL; PB1 domain,Phox/Bem1p;
PB1,,CUFF.21341.1
(223 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g077030.1 | PB1 domain protein | HC | chr3:34590055-345871... 215 3e-56
Medtr4g105020.1 | PB1 domain protein | HC | chr4:43514421-435128... 177 8e-45
Medtr5g032960.1 | PB1 domain protein | HC | chr5:14201643-141998... 104 5e-23
Medtr4g091530.1 | octicosapeptide/phox/Bem1p (PB1) domain protei... 87 2e-17
Medtr6g033130.2 | octicosapeptide/phox/Bem1p domain kinase super... 81 9e-16
Medtr6g033130.1 | octicosapeptide/phox/Bem1p domain kinase super... 81 9e-16
Medtr6g033130.3 | octicosapeptide/phox/Bem1p domain kinase super... 81 9e-16
Medtr2g010160.1 | octicosapeptide/phox/Bem1p (PB1) domain protei... 78 7e-15
Medtr4g092850.1 | octicosapeptide/phox/Bem1p (PB1) domain protei... 75 4e-14
Medtr2g461180.1 | octicosapeptide/phox/Bem1p domain kinase super... 75 5e-14
Medtr4g116520.1 | octicosapeptide/phox/Bem1p domain kinase super... 74 1e-13
Medtr2g005700.1 | PB1 domain protein | HC | chr2:277674-276243 |... 73 2e-13
Medtr1g109470.1 | octicosapeptide/phox/Bem1p family protein | HC... 72 3e-13
Medtr1g090020.1 | octicosapeptide/phox/Bem1p domain kinase super... 72 3e-13
Medtr8g442400.1 | octicosapeptide/phox/Bem1p domain kinase super... 65 3e-11
>Medtr3g077030.1 | PB1 domain protein | HC | chr3:34590055-34587139
| 20130731
Length = 204
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/234 (53%), Positives = 146/234 (62%), Gaps = 41/234 (17%)
Query: 1 MESKPAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXX 60
MESKP++T+K+L SYGGKI R TDG+LRYVGGHTR LA D
Sbjct: 1 MESKPSNTIKILYSYGGKIRLRSTDGELRYVGGHTRVLAVDRS----------------- 43
Query: 61 VFIVNDSFLVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEYD 120
+ FS ELMVKL ELCGSSVTLRCQLP GDLETLISITNDEDL NI EY+
Sbjct: 44 ----------ISFS-ELMVKLEELCGSSVTLRCQLPNGDLETLISITNDEDLTNIIDEYE 92
Query: 121 RASSELTHPLKIRAVLSPPRSMMIKKLXXXXXXXXXXXXXXXXXXXHTSAESLPYAAVHR 180
RAS +LTHPLKI+A+LS P+S + K+ HTSAESLPYA +R
Sbjct: 93 RASLKLTHPLKIKAILSQPKSSL--KVSPDLSSSSSNASLSPARSPHTSAESLPYAVAYR 150
Query: 181 IVRQNRSPRAPLGFPI--------KACCYPGRFEGSPRF---LYRGPHCSNYCH 223
I R +RSPRAP+G+ I KACCY G+ +GSPR +Y GP +NYCH
Sbjct: 151 IGRHSRSPRAPVGYSIGGVRNGSAKACCYMGQLQGSPRSPRPVYYGPRFNNYCH 204
>Medtr4g105020.1 | PB1 domain protein | HC | chr4:43514421-43512874
| 20130731
Length = 178
Score = 177 bits (449), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 126/223 (56%), Gaps = 45/223 (20%)
Query: 1 MESKPAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXX 60
MES P +T+K L SYGGKILPR TDG+LRY GGHTR LA
Sbjct: 1 MESYPKNTIKFLFSYGGKILPRLTDGKLRYTGGHTRVLALPPP----------------- 43
Query: 61 VFIVNDSFLVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEYD 120
+ FS ELMVKLVELCGSSVTL+C LP GDLETLISIT+DEDL NI EYD
Sbjct: 44 ----------ISFS-ELMVKLVELCGSSVTLKCPLPNGDLETLISITSDEDLKNIIEEYD 92
Query: 121 RASSELTHPLKIRAVLSPPRSMMIKKLXXXXXXXXXXXXXXXXXXXHTSAESLPYAAVHR 180
RASS L HPLKIRA+LSPP+S KKL H ES Y AV+R
Sbjct: 93 RASSSLIHPLKIRAILSPPKSF--KKL-SPPPSSSSSSTHSLPGSPHAFVESPSYVAVNR 149
Query: 181 IVRQNRSPRAPLGFPIKACCYPGRFEGSPRFLYRGPHCSNYCH 223
+ R +K CY + +GSPRFLYR +NYCH
Sbjct: 150 LNR------------LKGSCYTRQLDGSPRFLYR--FANNYCH 178
>Medtr5g032960.1 | PB1 domain protein | HC | chr5:14201643-14199883
| 20130731
Length = 223
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 78/138 (56%), Gaps = 30/138 (21%)
Query: 5 PAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXVFIV 64
P T+K LCSYGGKILPR DG+LRY+GGH R L+ D
Sbjct: 12 PKSTIKFLCSYGGKILPRYPDGKLRYLGGHNRVLSVDRS--------------------- 50
Query: 65 NDSFLVVLFSAELMVKLVELCGSSVT-LRCQLPKGDLETLISITNDEDLANIFHEYDRAS 123
+ FS L+ C SSVT LRCQLP DL+ L+SIT+DEDL N+ EYDR +
Sbjct: 51 ------IQFSELLLKLKEL-CSSSVTQLRCQLPAEDLDALVSITSDEDLINLIEEYDRTA 103
Query: 124 SELTHPLKIRAVLSPPRS 141
S + LKI+A +SPPRS
Sbjct: 104 SPQSQ-LKIKAFISPPRS 120
>Medtr4g091530.1 | octicosapeptide/phox/Bem1p (PB1) domain protein |
HC | chr4:36274735-36276580 | 20130731
Length = 431
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 30/132 (22%)
Query: 9 LKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXVFIVNDSF 68
++ +CS+GGKILPRP+D QLRYVGG TR +A VN S
Sbjct: 29 VRFMCSFGGKILPRPSDNQLRYVGGDTRIVA------------------------VNRS- 63
Query: 69 LVVLFSAELMVKLVELCG-SSVTLRCQLPKGDLETLISITNDEDLANIFHEYDRAS-SEL 126
+ FSA L+ KL +L G S++T + QLP DL+ LI++T DED+ N+ EYDR + SE
Sbjct: 64 --ISFSA-LVHKLSKLSGMSNITAKYQLPNEDLDALITVTTDEDVDNMIDEYDRVTQSEN 120
Query: 127 THPLKIRAVLSP 138
++R L P
Sbjct: 121 PRAARLRLFLFP 132
>Medtr6g033130.2 | octicosapeptide/phox/Bem1p domain kinase
superfamily protein | HC | chr6:10447615-10453776 |
20130731
Length = 1165
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 28/111 (25%)
Query: 9 LKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXVFIVNDSF 68
+K LCS+GGKILPRP DG+LRYVGG T ++ I ND
Sbjct: 191 MKFLCSFGGKILPRPGDGKLRYVGGETHIIS-----------------------IRND-- 225
Query: 69 LVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEY 119
+ ELM K + +C T++ QLP DL+ LIS+++DEDL N+ EY
Sbjct: 226 ---ISWQELMNKTLGICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEY 273
>Medtr6g033130.1 | octicosapeptide/phox/Bem1p domain kinase
superfamily protein | HC | chr6:10447615-10454894 |
20130731
Length = 1254
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 28/111 (25%)
Query: 9 LKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXVFIVNDSF 68
+K LCS+GGKILPRP DG+LRYVGG T ++ I ND
Sbjct: 191 MKFLCSFGGKILPRPGDGKLRYVGGETHIIS-----------------------IRND-- 225
Query: 69 LVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEY 119
+ ELM K + +C T++ QLP DL+ LIS+++DEDL N+ EY
Sbjct: 226 ---ISWQELMNKTLGICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEY 273
>Medtr6g033130.3 | octicosapeptide/phox/Bem1p domain kinase
superfamily protein | HC | chr6:10447634-10454894 |
20130731
Length = 1254
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 28/111 (25%)
Query: 9 LKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXVFIVNDSF 68
+K LCS+GGKILPRP DG+LRYVGG T ++ I ND
Sbjct: 191 MKFLCSFGGKILPRPGDGKLRYVGGETHIIS-----------------------IRND-- 225
Query: 69 LVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEY 119
+ ELM K + +C T++ QLP DL+ LIS+++DEDL N+ EY
Sbjct: 226 ---ISWQELMNKTLGICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEY 273
>Medtr2g010160.1 | octicosapeptide/phox/Bem1p (PB1) domain protein |
HC | chr2:2247900-2245967 | 20130731
Length = 451
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 29/137 (21%)
Query: 1 MESKPAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXX 60
+++ ++ K +CSYGGKI PR D QL YVGG T+ LA D
Sbjct: 36 QQNQTSYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRN----------------- 78
Query: 61 VFIVNDSFLVVLFSAELMVKLVELCGS-SVTLRCQLPKGDLETLISITNDEDLANIFHEY 119
+ FS+ ++ KL L + V+ + QLP DL+ LIS+TND+DL ++ +EY
Sbjct: 79 ----------IKFSS-MISKLSSLIEAHDVSFKYQLPGEDLDALISVTNDDDLDHMMNEY 127
Query: 120 DRASSELTHPLKIRAVL 136
DR P ++R L
Sbjct: 128 DRLYRASARPARMRLFL 144
>Medtr4g092850.1 | octicosapeptide/phox/Bem1p (PB1) domain protein |
HC | chr4:36843405-36845427 | 20130731
Length = 450
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 31/136 (22%)
Query: 1 MESKPAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXX 60
E + + K +CSYGGKI PR D QL Y+GG T+ LA D
Sbjct: 31 WEDQQNYKAKFMCSYGGKIQPRSHDNQLSYIGGDTKILAVDRS----------------- 73
Query: 61 VFIVNDSFLVVLFSAELMVKLVELCGS---SVTLRCQLPKGDLETLISITNDEDLANIFH 117
+ F A + KL LC + ++ + QLP +L+ LIS+T ++DL ++ H
Sbjct: 74 ----------IKFQA-FLSKLSTLCDALQQDISFKYQLPGEELDALISVTTEDDLEHMMH 122
Query: 118 EYDRASSELTHPLKIR 133
EYDR + P+++R
Sbjct: 123 EYDRLYRPSSKPVRMR 138
>Medtr2g461180.1 | octicosapeptide/phox/Bem1p domain kinase
superfamily protein | HC | chr2:25237288-25245872 |
20130731
Length = 1417
Score = 75.1 bits (183), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 28/120 (23%)
Query: 2 ESKPAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXV 61
+S LK +CSYGG+I PRP+DG LRYVGG TR ++
Sbjct: 208 DSVSGRKLKFMCSYGGRIYPRPSDGLLRYVGGQTRIISVKR------------------- 248
Query: 62 FIVNDSFLVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEYDR 121
N SF +L+ K+V+ G V ++ QLP DL+ L+S++ +DL N+ EY+R
Sbjct: 249 ---NVSF------NDLVQKMVDTFGQPVVIKYQLPGEDLDALVSVSCADDLDNMMEEYER 299
>Medtr4g116520.1 | octicosapeptide/phox/Bem1p domain kinase
superfamily protein | HC | chr4:48267560-48275263 |
20130731
Length = 1380
Score = 73.9 bits (180), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 28/120 (23%)
Query: 2 ESKPAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXV 61
+S +K LCS+GGKILPRP+DG LRYVGG TR ++
Sbjct: 145 DSNSGRKVKFLCSFGGKILPRPSDGVLRYVGGQTRIISVKK------------------- 185
Query: 62 FIVNDSFLVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEYDR 121
N SF +L+ K+V+ G V ++ QLP+ DL+ L+SI +D+ N+ EY +
Sbjct: 186 ---NVSF------NDLVQKMVDTYGQPVAIKYQLPEEDLDALVSIACPDDVENMMEEYGK 236
>Medtr2g005700.1 | PB1 domain protein | HC | chr2:277674-276243 |
20130731
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 30/144 (20%)
Query: 2 ESKPAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXV 61
+ P + +K LCSYGGK+LPR +DG L+YVGG TR +
Sbjct: 6 DESPKNKVKFLCSYGGKVLPRSSDGVLKYVGGETRVIC---------------------- 43
Query: 62 FIVNDSFLVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEYDR 121
+ D V FS ++M K+ + G V L+ QL +L+ L+S+ +EDL ++ E+DR
Sbjct: 44 -VPRD----VTFS-DMMKKVSSMVGGEVVLKYQLIPEELDALVSVRTNEDLKHMIEEHDR 97
Query: 122 ASSELTHPLKIRAVLSPPRSMMIK 145
+ PL +RA L P + ++++
Sbjct: 98 HETGGA-PL-LRAFLFPSKPLLLE 119
>Medtr1g109470.1 | octicosapeptide/phox/Bem1p family protein | HC |
chr1:49509995-49513014 | 20130731
Length = 751
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 28/134 (20%)
Query: 9 LKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXVFIVNDSF 68
L+L+CSYGG I+PRPTD L YVGG TR + +V +
Sbjct: 55 LRLMCSYGGHIVPRPTDKALCYVGGDTR------------------------IVVVERAT 90
Query: 69 LVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEYDRASSELT- 127
+ S L L L G T + QLP DL++LIS++ DEDL N+ EYDR +S +
Sbjct: 91 SLGDLSTRLSKTL--LNGRPFTFKYQLPNEDLDSLISVSTDEDLENMIDEYDRTNSTNSS 148
Query: 128 -HPLKIRAVLSPPR 140
P +IR L P +
Sbjct: 149 LKPSRIRLFLFPSK 162
>Medtr1g090020.1 | octicosapeptide/phox/Bem1p domain kinase
superfamily protein | HC | chr1:40311252-40306008 |
20130731
Length = 1180
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 28/113 (24%)
Query: 9 LKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXVFIVNDSF 68
+K LCS+GG+ILPRP DG+LRYVGG TR + S
Sbjct: 194 IKFLCSFGGRILPRPNDGKLRYVGGETRII----------------------------SI 225
Query: 69 LVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEYDR 121
+ EL K +C + ++ QLP DL+ LIS+ +DEDL ++ EY+
Sbjct: 226 GKNMTHEELTGKTYGICNQTHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEE 278
>Medtr8g442400.1 | octicosapeptide/phox/Bem1p domain kinase
superfamily protein | LC | chr8:16012647-16021116 |
20130731
Length = 1668
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 28/119 (23%)
Query: 2 ESKPAHTLKLLCSYGGKILPRPTDGQLRYVGGHTRALAGDXXXXXXXXXXXXXXXXXXXV 61
+ + + +K LCS+GG+ILPRP DG+LRYVGG T +
Sbjct: 172 KRRSSMMMKCLCSFGGRILPRPRDGKLRYVGGKTHLIR---------------------- 209
Query: 62 FIVNDSFLVVLFSAELMVKLVELCGSSVTLRCQLPKGDLETLISITNDEDLANIFHEYD 120
+ S+L + A + LV + L+ QLP +L+ L+S+T DEDL N+ EY+
Sbjct: 210 LRKDISWLELSQKAVFIYNLVHV------LKYQLPGEELDALVSVTTDEDLQNMMEEYN 262