Miyakogusa Predicted Gene
- Lj0g3v0315789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0315789.1 Non Characterized Hit- tr|J3MV70|J3MV70_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB08G3,31.97,0.0000000000006,SUBFAMILY NOT NAMED,NULL;
SERINE/THREONINE-PROTEIN KINASE RIO,NULL; zf-C2H2,Zinc finger, C2H2;
ZINC_,CUFF.21333.1
(574 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC | chr1... 454 e-127
Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC | chr1... 409 e-114
Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC | chr1... 325 1e-88
Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC | chr1... 320 2e-87
Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |... 297 2e-80
Medtr2g099990.1 | C2H2-type zinc finger protein | HC | chr2:4289... 294 2e-79
Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | ... 291 2e-78
Medtr1g016010.1 | C2H2-type zinc finger protein | HC | chr1:4158... 284 1e-76
Medtr2g093960.1 | C2H2-type zinc finger protein | LC | chr2:4003... 279 5e-75
Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |... 265 8e-71
Medtr2g099990.2 | C2H2-type zinc finger protein | HC | chr2:4289... 256 3e-68
Medtr2g017720.1 | F-box associated protein | LC | chr2:5437660-5... 166 5e-41
Medtr3g102000.1 | hypothetical protein | LC | chr3:46988766-4698... 114 3e-25
Medtr5g030560.1 | C2H2-like zinc finger protein, putative | HC |... 84 4e-16
Medtr1g093095.1 | C2H2-type zinc finger protein | HC | chr1:4193... 75 2e-13
>Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC |
chr1:42286106-42289867 | 20130731
Length = 539
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 292/562 (51%), Positives = 338/562 (60%), Gaps = 91/562 (16%)
Query: 35 VPQKKRRNHQPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPW 94
VPQKKRRN QPGTP PD+EVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPW
Sbjct: 44 VPQKKRRN-QPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPW 102
Query: 95 KLKQKNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXY 154
KLKQK+ KE +RKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHG Y
Sbjct: 103 KLKQKSNKE-PRRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKY 161
Query: 155 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESA-RHPSNLNPLGT- 212
AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA ES RH NP G+
Sbjct: 162 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESVLRHH---NPFGST 218
Query: 213 -HLYGTN-HMSLG-LSH--------VGTQLQNQNSILTLGNAAAGAPKFEHLIXXXXXXX 261
LY TN H+SLG +SH + + N N++L LG+A PKFE +
Sbjct: 219 HQLYATNHHISLGQISHQLQNHQNQITSSTSNNNNLLRLGSA---PPKFEQNLISSPPLN 275
Query: 262 XXXXXXXXXXXXXXXXXTADPNQGIQDLQSHHHQGQFSNKQLHGLMQLPDFQGXXXXXXX 321
+D + + Q QGQF NKQLHGLM LPD QG
Sbjct: 276 HSSSFGHSIPSSSPFFNMSDISNQSFEEQQ-SQQGQFLNKQLHGLMHLPDLQG------- 327
Query: 322 XXXXXXXXXXXXXXXXXXXXXXXXXXXDSTIPDQFNSI--TAGTTLYTNSPGSSNHHQVG 379
+ + DQFN++ T GTTLY N+ S + HQVG
Sbjct: 328 --------------NTNTNNSNSSNLFNLMVHDQFNNMSSTQGTTLYINNNSSLSDHQVG 373
Query: 380 SALSSIFGNSSLQQENNMPPHMSATALLQKASQMGLSTTTINNGSSLLRRMESSSTNGSE 439
F NS +N PHMSATALLQKASQ+G ST + NN +S +
Sbjct: 374 ------FVNSMQHGQNMSSPHMSATALLQKASQIG-STNSTNNNKGSNNDHKSGDRDFVV 426
Query: 440 SELNNFAATFGSDHSKGEGIRSSMENDHQHH-LHGIMNSLANRNNNSMFGHVKGNENNNV 498
S+ NN ATFG+ SS+ENDH ++ LHG++NS+AN N +S+F GNE+N
Sbjct: 427 SDHNNINATFGNR-------SSSIENDHDNNDLHGLINSIANGNTSSIF----GNESN-- 473
Query: 499 SHFHIMEEAKRLSSQNLGGVCFGGSDKLTLDFLGVNGGIVRNMSGGFSQREQLDSI---- 554
+ FGGSDKLTLDFLGV GG+VRNMSGGFSQ EQ +
Sbjct: 474 -----------------LNMRFGGSDKLTLDFLGV-GGMVRNMSGGFSQSEQQRDMMNTS 515
Query: 555 ---LDPKLESTQANQQFGSSSL 573
L+ L+S ++Q FGSS++
Sbjct: 516 MVSLNHDLKSAHSSQHFGSSNI 537
>Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC |
chr1:42286195-42289752 | 20130731
Length = 522
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 275/562 (48%), Positives = 322/562 (57%), Gaps = 108/562 (19%)
Query: 35 VPQKKRRNHQPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPW 94
VPQKKRRN QPGTP ++FICEVCNKGFQREQNLQLHRRGHNLPW
Sbjct: 44 VPQKKRRN-QPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHNLPW 85
Query: 95 KLKQKNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXY 154
KLKQK+ KE +RKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHG Y
Sbjct: 86 KLKQKSNKE-PRRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKY 144
Query: 155 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESA-RHPSNLNPLGT- 212
AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA ES RH NP G+
Sbjct: 145 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESVLRHH---NPFGST 201
Query: 213 -HLYGTN-HMSLG-LSH--------VGTQLQNQNSILTLGNAAAGAPKFEHLIXXXXXXX 261
LY TN H+SLG +SH + + N N++L LG+A PKFE +
Sbjct: 202 HQLYATNHHISLGQISHQLQNHQNQITSSTSNNNNLLRLGSA---PPKFEQNLISSPPLN 258
Query: 262 XXXXXXXXXXXXXXXXXTADPNQGIQDLQSHHHQGQFSNKQLHGLMQLPDFQGXXXXXXX 321
+D + + Q QGQF NKQLHGLM LPD QG
Sbjct: 259 HSSSFGHSIPSSSPFFNMSDISNQSFEEQQ-SQQGQFLNKQLHGLMHLPDLQG------- 310
Query: 322 XXXXXXXXXXXXXXXXXXXXXXXXXXXDSTIPDQFNSI--TAGTTLYTNSPGSSNHHQVG 379
+ + DQFN++ T GTTLY N+ S + HQVG
Sbjct: 311 --------------NTNTNNSNSSNLFNLMVHDQFNNMSSTQGTTLYINNNSSLSDHQVG 356
Query: 380 SALSSIFGNSSLQQENNMPPHMSATALLQKASQMGLSTTTINNGSSLLRRMESSSTNGSE 439
F NS +N PHMSATALLQKASQ+G ST + NN +S +
Sbjct: 357 ------FVNSMQHGQNMSSPHMSATALLQKASQIG-STNSTNNNKGSNNDHKSGDRDFVV 409
Query: 440 SELNNFAATFGSDHSKGEGIRSSMENDHQHH-LHGIMNSLANRNNNSMFGHVKGNENNNV 498
S+ NN ATFG+ SS+ENDH ++ LHG++NS+AN N +S+F GNE+N
Sbjct: 410 SDHNNINATFGNR-------SSSIENDHDNNDLHGLINSIANGNTSSIF----GNESN-- 456
Query: 499 SHFHIMEEAKRLSSQNLGGVCFGGSDKLTLDFLGVNGGIVRNMSGGFSQREQLDSI---- 554
+ FGGSDKLTLDFLGV GG+VRNMSGGFSQ EQ +
Sbjct: 457 -----------------LNMRFGGSDKLTLDFLGV-GGMVRNMSGGFSQSEQQRDMMNTS 498
Query: 555 ---LDPKLESTQANQQFGSSSL 573
L+ L+S ++Q FGSS++
Sbjct: 499 MVSLNHDLKSAHSSQHFGSSNI 520
>Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC |
chr1:50790900-50782752 | 20130731
Length = 571
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/227 (70%), Positives = 171/227 (75%), Gaps = 19/227 (8%)
Query: 44 QPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKNTKE 103
QPGTP PD+EVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQK TKE
Sbjct: 49 QPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKE 108
Query: 104 QAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAH 163
KRKVYLCPEPTCVHHDPSRALGDLTGIKKH+SRKHG YAVQSDWKAH
Sbjct: 109 -PKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAH 167
Query: 164 SKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARHP--SNLNPLGTHLYGT---- 217
SKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA E R P S +G+HLYG+
Sbjct: 168 SKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQEGPRQPPISLTGAIGSHLYGSSSNN 227
Query: 218 NHMSLGLSHVGTQLQNQ-----------NSILTLGNAAAG-APKFEH 252
N M L ++ V Q+ N IL LG AAA + +F+H
Sbjct: 228 NTMGLSIAQVAAQMPNMQQQDHHSSNSATEILRLGAAAANRSGQFDH 274
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 362 GTTLYTNSPGSSNHHQVGSALSSIFGNSSLQQENNMP-PHMSATALLQKASQMGLSTTTI 420
GT + S G+S+ + S + S GNS++ MSATALLQKA+QMG +T++
Sbjct: 352 GTNFFNGSGGTSSAPSLFSNVFSQGGNSNINAAAGTAISSMSATALLQKAAQMG-ATSSN 410
Query: 421 NNGSSLLRRMESSSTNGSESELNNFAATFGSDHSKGE------GIRSSMENDHQHHLHGI 474
NG++ ++S N S N ++ G DHS+ + N Q +L +
Sbjct: 411 GNGTTATSLLKSFGNNTGAS---NSTSSGGGDHSRVQMGGGSGNYGFGGGNHEQSNLQDL 467
Query: 475 MNSLANRNNNSMFGHVKGNENNNVSHFHIMEEAKRLSSQNLGGVCFGGSDKLTLDFLGVN 534
MNS A N S+F G V + S +LT DFLGV
Sbjct: 468 MNSFAATGNTSIFDQSGGGGGGGVGLGRGGGD----------------SSQLTRDFLGVG 511
Query: 535 GGIVRNMSGGF-SQREQLDSI--LDPKLESTQAN 565
IVR+MSG QR+Q + L LE Q N
Sbjct: 512 HEIVRSMSGVVGGQRDQHAAAFNLAASLEGDQRN 545
>Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC |
chr1:50789869-50782797 | 20130731
Length = 582
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/238 (67%), Positives = 172/238 (72%), Gaps = 30/238 (12%)
Query: 44 QPGTP-----------YPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNL 92
QPGTP YPD+EVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNL
Sbjct: 49 QPGTPSKFLNYFIANLYPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNL 108
Query: 93 PWKLKQKNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXX 152
PWKLKQK TKE KRKVYLCPEPTCVHHDPSRALGDLTGIKKH+SRKHG
Sbjct: 109 PWKLKQKTTKE-PKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSK 167
Query: 153 XYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARHP--SNLNPL 210
YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA E R P S +
Sbjct: 168 KYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQEGPRQPPISLTGAI 227
Query: 211 GTHLYGT----NHMSLGLSHVGTQLQNQ-----------NSILTLGNAAAG-APKFEH 252
G+HLYG+ N M L ++ V Q+ N IL LG AAA + +F+H
Sbjct: 228 GSHLYGSSSNNNTMGLSIAQVAAQMPNMQQQDHHSSNSATEILRLGAAAANRSGQFDH 285
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 362 GTTLYTNSPGSSNHHQVGSALSSIFGNSSLQQENNMP-PHMSATALLQKASQMGLSTTTI 420
GT + S G+S+ + S + S GNS++ MSATALLQKA+QMG +T++
Sbjct: 363 GTNFFNGSGGTSSAPSLFSNVFSQGGNSNINAAAGTAISSMSATALLQKAAQMG-ATSSN 421
Query: 421 NNGSSLLRRMESSSTNGSESELNNFAATFGSDHSKGE------GIRSSMENDHQHHLHGI 474
NG++ ++S N S N ++ G DHS+ + N Q +L +
Sbjct: 422 GNGTTATSLLKSFGNNTGAS---NSTSSGGGDHSRVQMGGGSGNYGFGGGNHEQSNLQDL 478
Query: 475 MNSLANRNNNSMFGHVKGNENNNVSHFHIMEEAKRLSSQNLGGVCFGGSDKLTLDFLGVN 534
MNS A N S+F G V + S +LT DFLGV
Sbjct: 479 MNSFAATGNTSIFDQSGGGGGGGVGLGRGGGD----------------SSQLTRDFLGVG 522
Query: 535 GGIVRNMSGGF-SQREQLDSI--LDPKLESTQAN 565
IVR+MSG QR+Q + L LE Q N
Sbjct: 523 HEIVRSMSGVVGGQRDQHAAAFNLAASLEGDQRN 556
>Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |
chr8:5790010-5786899 | 20130731
Length = 517
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 134/171 (78%), Positives = 147/171 (85%), Gaps = 2/171 (1%)
Query: 36 PQKKRRNHQPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK 95
P KK+RN PG P PD+EVIA+SPK+L+A NRFICE+CNKGFQR+QNLQLHRRGHNLPWK
Sbjct: 60 PMKKKRN-LPGNPDPDAEVIAMSPKSLLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWK 118
Query: 96 LKQKNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYA 155
LKQ+ +KE ++KVY+CPEPTCVHHDPSRALGDLTGIKKHFSRKHG YA
Sbjct: 119 LKQRTSKE-IRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYA 177
Query: 156 VQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARHPSN 206
VQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA ESAR +N
Sbjct: 178 VQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAMTN 228
>Medtr2g099990.1 | C2H2-type zinc finger protein | HC |
chr2:42897047-42899888 | 20130731
Length = 468
Score = 294 bits (753), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 133/168 (79%), Positives = 143/168 (85%), Gaps = 2/168 (1%)
Query: 35 VPQKKRRNHQPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPW 94
P KKRRN PG P P +EVIALSPKTLMATNRFICE+CNKGFQR+QNLQLH+RGHNLPW
Sbjct: 43 TPAKKRRN-LPGNPDPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPW 101
Query: 95 KLKQKNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXY 154
KLKQ+ T + ++KVY+CPEPTCVHHDPSRALGDLTGIKKHF RKHG Y
Sbjct: 102 KLKQR-TSNEIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKY 160
Query: 155 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESAR 202
AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA ES+R
Sbjct: 161 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESSR 208
>Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | HC
| chr4:22086566-22083892 | 20130731
Length = 495
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 126/171 (73%), Positives = 146/171 (85%), Gaps = 1/171 (0%)
Query: 32 PPVVPQKKRRNHQPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHN 91
P VP KK+RN PGTP P+SEV+A+SPK+LMATNRF+CE+CNKGFQR+QNLQLHRRGHN
Sbjct: 32 PNPVPSKKKRN-LPGTPDPESEVVAMSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHN 90
Query: 92 LPWKLKQKNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXX 151
LPWKLKQ+ K+Q ++KVY+CPE TCVHH+PSRALGDLTGIKKH+SRKHG
Sbjct: 91 LPWKLKQRANKDQIRKKVYVCPEKTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCS 150
Query: 152 XXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESAR 202
YAVQSDWKAHSK CGTREY+CDCGT+FSR+DSFITHRAFCDAL +SA+
Sbjct: 151 KKYAVQSDWKAHSKICGTREYKCDCGTIFSRKDSFITHRAFCDALTEQSAK 201
>Medtr1g016010.1 | C2H2-type zinc finger protein | HC |
chr1:4158857-4161721 | 20130731
Length = 452
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
Query: 36 PQKKRRNHQPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK 95
PQ KR+ + PG P P+++V+ALSP+TL+ATNRFICE+CNKGFQR+QNLQLH+RGHNLPWK
Sbjct: 38 PQTKRKRNLPGHPDPEAQVLALSPQTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWK 97
Query: 96 LKQKNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYA 155
LK++N E ++KVY+CPEPTCVHHDPSRALGDLTGIKKHF RKHG YA
Sbjct: 98 LKKRNVNEIIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYA 157
Query: 156 VQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARHPSNLNPL 210
VQSDWKAHSK CGT+EY+CDCGTLFSRRDSFITHRAFCD L+ ESA S +NPL
Sbjct: 158 VQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDVLSQESAS-ISAVNPL 211
>Medtr2g093960.1 | C2H2-type zinc finger protein | LC |
chr2:40039886-40042385 | 20130731
Length = 414
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 123/164 (75%), Positives = 138/164 (84%)
Query: 39 KRRNHQPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 98
KR+ PGTP PDSEVIALSPK+LM +NRFICEVCNKGF+R+QNLQLHRRGHNLPWKLKQ
Sbjct: 32 KRKRSLPGTPDPDSEVIALSPKSLMTSNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 91
Query: 99 KNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQS 158
+N E ++KVY+CPE +CVHHDPSRALGDLTGIKKHFSRKHG YAVQS
Sbjct: 92 RNKLEVIRKKVYVCPEKSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQS 151
Query: 159 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESAR 202
DWKAHSK CGT+EYRCDCGTLFSR+DSF+THRAFC++L SAR
Sbjct: 152 DWKAHSKICGTKEYRCDCGTLFSRKDSFLTHRAFCESLVEGSAR 195
>Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |
chr2:38896799-38894235 | 20130731
Length = 429
Score = 265 bits (678), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 118/156 (75%), Positives = 132/156 (84%), Gaps = 1/156 (0%)
Query: 47 TPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKNTKEQAK 106
T P++EVI+LSPKTLMATNRF+CE+C K FQR+QNLQLHRRGHNLPWKLKQ+ +KE K
Sbjct: 15 TTNPEAEVISLSPKTLMATNRFVCEICLKDFQRDQNLQLHRRGHNLPWKLKQRTSKEIRK 74
Query: 107 RKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKT 166
R VY+CPE TCVH+ PSRALGDLTGIKKHF RKHG YAVQSDWKAHSKT
Sbjct: 75 R-VYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHSKT 133
Query: 167 CGTREYRCDCGTLFSRRDSFITHRAFCDALAHESAR 202
CGTREY+CDCGT+FSRRDSF+THRAFCDALA E+AR
Sbjct: 134 CGTREYKCDCGTIFSRRDSFVTHRAFCDALAEETAR 169
>Medtr2g099990.2 | C2H2-type zinc finger protein | HC |
chr2:42897047-42899888 | 20130731
Length = 399
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
Query: 63 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKNTKEQAKRKVYLCPEPTCVHHDP 122
MATNRFICE+CNKGFQR+QNLQLH+RGHNLPWKLKQ+ T + ++KVY+CPEPTCVHHDP
Sbjct: 1 MATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQR-TSNEIRKKVYVCPEPTCVHHDP 59
Query: 123 SRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSR 182
SRALGDLTGIKKHF RKHG YAVQSDWKAHSKTCGTREYRCDCGTLFSR
Sbjct: 60 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
Query: 183 RDSFITHRAFCDALAHESAR 202
RDSFITHRAFCDALA ES+R
Sbjct: 120 RDSFITHRAFCDALAEESSR 139
>Medtr2g017720.1 | F-box associated protein | LC |
chr2:5437660-5435484 | 20130731
Length = 432
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 90/115 (78%), Gaps = 6/115 (5%)
Query: 50 PDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKNTKEQAKRKV 109
P++EVI+LSPK LMATNRF+CE+C K FQR+QNLQLHRRGHNLPWKLKQ+ +K+ KR V
Sbjct: 324 PEAEVISLSPKPLMATNRFVCEICLKDFQRDQNLQLHRRGHNLPWKLKQRTSKKIRKR-V 382
Query: 110 YLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHS 164
Y+CPE VH+ PSRALGDLTGIKKHF RKHG Y VQSDWKAHS
Sbjct: 383 YVCPEKIRVHNHPSRALGDLTGIKKHFCRKHG-----EKKCSKFYVVQSDWKAHS 432
>Medtr3g102000.1 | hypothetical protein | LC |
chr3:46988766-46986877 | 20130731
Length = 226
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 69/100 (69%), Gaps = 8/100 (8%)
Query: 66 NRFICEVCN----KGFQREQNLQLHRRGHNLPWKLKQKNTKEQAKRKVYLCPEPTCVHHD 121
NR++ ++ + FQR QNLQLHRRG+NLPWKLKQ+ +KE KR VY+CPE T VH+
Sbjct: 36 NRYVIKLYAHAHPEDFQRNQNLQLHRRGYNLPWKLKQRTSKEIRKR-VYVCPEKTRVHNH 94
Query: 122 PSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWK 161
PSRALGDLTGIKKHF R H YAVQSDWK
Sbjct: 95 PSRALGDLTGIKKHFCRNHS---ENKWKCSKFYAVQSDWK 131
>Medtr5g030560.1 | C2H2-like zinc finger protein, putative | HC |
chr5:12937715-12939520 | 20130731
Length = 81
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 41/44 (93%)
Query: 50 PDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLP 93
P++EVI+LSPK LMATNRF+CE+C K FQR+QNLQLHRRG+NLP
Sbjct: 17 PEAEVISLSPKPLMATNRFVCEICLKDFQRDQNLQLHRRGYNLP 60
>Medtr1g093095.1 | C2H2-type zinc finger protein | HC |
chr1:41939075-41940250 | 20130731
Length = 294
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 47 TPYPDSEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK--------LKQ 98
TP I + L+ +F C VCNK F R N+Q+H GH ++ K
Sbjct: 94 TPIIPQYWIPSPAQILVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGPKP 153
Query: 99 KNTKEQAKRKVYLCPEPTC---VHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYA 155
++ K Y C E C +++ +R L D ++ H+ RKHG +A
Sbjct: 154 ASSSSMLKLPCYCCAE-GCRNNINYPRARPLKDFRTLQTHYKRKHGGKSFECRKCRKTFA 212
Query: 156 VQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITH-RAF 192
V+ DW+ H K CG + + C CG+ F + S H RAF
Sbjct: 213 VRGDWRTHEKNCG-KLWFCICGSDFKHKRSLKDHVRAF 249