Miyakogusa Predicted Gene

Lj0g3v0314979.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0314979.1 tr|C1EHQ8|C1EHQ8_MICSR Predicted protein
(Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,56.94,3e-19,HAD-like,HAD-like domain; seg,NULL,CUFF.21275.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g090025.1 | haloacid dehalogenase-like hydrolase | HC | ch...   150   4e-37
Medtr8g090025.2 | haloacid dehalogenase-like hydrolase | HC | ch...   149   5e-37
Medtr3g075230.1 | haloacid dehalogenase-like hydrolase | HC | ch...    58   3e-09

>Medtr8g090025.1 | haloacid dehalogenase-like hydrolase | HC |
           chr8:37676442-37680571 | 20130731
          Length = 323

 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 84/118 (71%), Gaps = 8/118 (6%)

Query: 27  TKNGFRYPRIKLFXXXXXXXX------XXXXXXXXXLQALIFDCDGVILESEHLHRQAYN 80
           T++ FR+P IKL                         QALIFDCDGVILESEHLHRQAYN
Sbjct: 27  TRHSFRFPTIKLPSFSNNNRNNHRVFFKVSASSSSSFQALIFDCDGVILESEHLHRQAYN 86

Query: 81  DAFVHFNVRCNSSSP--EPLNWDIEFYDVLQNTIGGGKPKMRWYFKEHGWPSSTLFET 136
           DAF+HFNVR  SSS   +PLNWDIEFYD LQN IGGGKPKMRWYFKEHGWPSST+FET
Sbjct: 87  DAFLHFNVRSPSSSSSSQPLNWDIEFYDQLQNQIGGGKPKMRWYFKEHGWPSSTIFET 144


>Medtr8g090025.2 | haloacid dehalogenase-like hydrolase | HC |
           chr8:37676410-37680694 | 20130731
          Length = 315

 Score =  149 bits (377), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 84/118 (71%), Gaps = 8/118 (6%)

Query: 27  TKNGFRYPRIKLFXXXXXXXX------XXXXXXXXXLQALIFDCDGVILESEHLHRQAYN 80
           T++ FR+P IKL                         QALIFDCDGVILESEHLHRQAYN
Sbjct: 27  TRHSFRFPTIKLPSFSNNNRNNHRVFFKVSASSSSSFQALIFDCDGVILESEHLHRQAYN 86

Query: 81  DAFVHFNVRCNSSSP--EPLNWDIEFYDVLQNTIGGGKPKMRWYFKEHGWPSSTLFET 136
           DAF+HFNVR  SSS   +PLNWDIEFYD LQN IGGGKPKMRWYFKEHGWPSST+FET
Sbjct: 87  DAFLHFNVRSPSSSSSSQPLNWDIEFYDQLQNQIGGGKPKMRWYFKEHGWPSSTIFET 144


>Medtr3g075230.1 | haloacid dehalogenase-like hydrolase | HC |
           chr3:34240288-34237032 | 20130731
          Length = 323

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 10/74 (13%)

Query: 60  LIFDCDGVILESEH-LHRQAYNDAFVHFNVRCNSSSPEPLNWDIEFYDVLQNTIGGGKPK 118
           L+FDCDGV++++E   HR ++ND F    +         + WD+E Y  L   IGGGK +
Sbjct: 83  LLFDCDGVLVDTEKDGHRISFNDTFQEKEL--------GVTWDVELYGELLK-IGGGKER 133

Query: 119 MRWYFKEHGWPSST 132
           M  YF + GWP++ 
Sbjct: 134 MTAYFNKTGWPANA 147