Miyakogusa Predicted Gene
- Lj0g3v0314249.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0314249.1 Non Characterized Hit- tr|D7SP48|D7SP48_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,71.77,0,seg,NULL; HATPase_c_3,NULL; ATPase domain of HSP90
chaperone/DNA topoisomerase II/histidine kinase,A,CUFF.21216.1
(344 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g076590.1 | histidine kinase-, DNA gyrase B | HC | chr8:32... 348 5e-96
Medtr3g077540.2 | histidine kinase-, DNA gyrase B | HC | chr3:34... 323 1e-88
Medtr3g077540.1 | histidine kinase-, DNA gyrase B | HC | chr3:34... 323 1e-88
Medtr8g096410.4 | histidine kinase-, DNA gyrase B, putative | HC... 303 1e-82
Medtr8g096410.1 | histidine kinase-, DNA gyrase B, putative | HC... 303 1e-82
Medtr8g096410.2 | histidine kinase-, DNA gyrase B, putative | HC... 303 1e-82
Medtr8g096410.3 | histidine kinase-, DNA gyrase B, putative | HC... 303 1e-82
Medtr4g105530.1 | histidine kinase-, DNA gyrase B | HC | chr4:43... 293 2e-79
Medtr8g076580.1 | histidine kinase-, DNA gyrase B | HC | chr8:32... 182 3e-46
Medtr5g024810.1 | CW-type zinc finger protein | HC | chr5:100112... 91 2e-18
>Medtr8g076590.1 | histidine kinase-, DNA gyrase B | HC |
chr8:32453780-32471662 | 20130731
Length = 512
Score = 348 bits (893), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 164/189 (86%), Positives = 174/189 (92%)
Query: 155 DPNSIRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADAIVFSRAVNSSRATQSVGLLS 214
DPNS+RKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADAIVFSR+ S RATQSVGLLS
Sbjct: 40 DPNSLRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADAIVFSRSTRSGRATQSVGLLS 99
Query: 215 YTFLRTTGQDDVIVPMIDFDISTHWAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQF 274
YTFLR TGQDDVI+PMIDFDIS HW EPI+Y + DDWS NLKTILDWSPF+SKEELMLQF
Sbjct: 100 YTFLRRTGQDDVIIPMIDFDISGHWVEPIVYGTLDDWSANLKTILDWSPFTSKEELMLQF 159
Query: 275 DDIGSHGTKILIYNLWLNDEGIYELSFDDDAEDIMLRDETNHGDEKKLSKKTVQLQSHIS 334
DDIGSHGTKILIYNLWLNDEGIYELSFDDDAEDIMLRDE +G+ KKL K+TVQLQSHI
Sbjct: 160 DDIGSHGTKILIYNLWLNDEGIYELSFDDDAEDIMLRDEAKNGNGKKLDKRTVQLQSHIF 219
Query: 335 YRIRHSLRV 343
YRIR+SLR
Sbjct: 220 YRIRYSLRA 228
>Medtr3g077540.2 | histidine kinase-, DNA gyrase B | HC |
chr3:34846655-34833326 | 20130731
Length = 643
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/289 (56%), Positives = 209/289 (72%), Gaps = 12/289 (4%)
Query: 59 SAPVYSRSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDN 118
+AP+ SR FWKAG Y G + + G + VHP FLHSNATSHKWAFGAIAEL+DN
Sbjct: 92 AAPL-SRQFWKAGSYDEGHASQIGVKDGK-NYLHVHPMFLHSNATSHKWAFGAIAELLDN 149
Query: 119 AVDEIQNGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSKKSKTTIGQ 178
AVDEIQNGATFV VDK N +D SP L QDDGGGMDP ++R+CMS G+S K SK +IGQ
Sbjct: 150 AVDEIQNGATFVSVDKTSNPRDGSPALLIQDDGGGMDPEAMRRCMSFGFSDKNSKLSIGQ 209
Query: 179 YGNGFKTSTMRLGADAIVFSRAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFDISTH 238
YGNGFKTS+MRLGADAIVFSR +N+ TQS+GLLSYTFL T D ++VPM++++ +T
Sbjct: 210 YGNGFKTSSMRLGADAIVFSRHLNNGILTQSIGLLSYTFLTQTQLDRIVVPMVNYEFNTS 269
Query: 239 WAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLNDEGIYE 298
+ + ++ + NL +L WSP+SS+ +L+ QFD++GSHGTK+++YNLWLNDEGI E
Sbjct: 270 TGSLDMLNGKEHFKANLSLLLRWSPYSSEADLLKQFDNMGSHGTKVIVYNLWLNDEGITE 329
Query: 299 LSFDDDAEDIMLRDETNHGDEKKLSK----KTVQLQSHISYRIRHSLRV 343
L+FD D +DI + D KK+ K +Q + HI+ R R+SLRV
Sbjct: 330 LNFDTDPKDIRIA-----WDIKKIGTKPAWKRIQ-EEHIANRFRYSLRV 372
>Medtr3g077540.1 | histidine kinase-, DNA gyrase B | HC |
chr3:34846699-34833381 | 20130731
Length = 643
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/289 (56%), Positives = 209/289 (72%), Gaps = 12/289 (4%)
Query: 59 SAPVYSRSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDN 118
+AP+ SR FWKAG Y G + + G + VHP FLHSNATSHKWAFGAIAEL+DN
Sbjct: 92 AAPL-SRQFWKAGSYDEGHASQIGVKDGK-NYLHVHPMFLHSNATSHKWAFGAIAELLDN 149
Query: 119 AVDEIQNGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSKKSKTTIGQ 178
AVDEIQNGATFV VDK N +D SP L QDDGGGMDP ++R+CMS G+S K SK +IGQ
Sbjct: 150 AVDEIQNGATFVSVDKTSNPRDGSPALLIQDDGGGMDPEAMRRCMSFGFSDKNSKLSIGQ 209
Query: 179 YGNGFKTSTMRLGADAIVFSRAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFDISTH 238
YGNGFKTS+MRLGADAIVFSR +N+ TQS+GLLSYTFL T D ++VPM++++ +T
Sbjct: 210 YGNGFKTSSMRLGADAIVFSRHLNNGILTQSIGLLSYTFLTQTQLDRIVVPMVNYEFNTS 269
Query: 239 WAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLNDEGIYE 298
+ + ++ + NL +L WSP+SS+ +L+ QFD++GSHGTK+++YNLWLNDEGI E
Sbjct: 270 TGSLDMLNGKEHFKANLSLLLRWSPYSSEADLLKQFDNMGSHGTKVIVYNLWLNDEGITE 329
Query: 299 LSFDDDAEDIMLRDETNHGDEKKLSK----KTVQLQSHISYRIRHSLRV 343
L+FD D +DI + D KK+ K +Q + HI+ R R+SLRV
Sbjct: 330 LNFDTDPKDIRIA-----WDIKKIGTKPAWKRIQ-EEHIANRFRYSLRV 372
>Medtr8g096410.4 | histidine kinase-, DNA gyrase B, putative | HC |
chr8:40447933-40438223 | 20130731
Length = 798
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/285 (52%), Positives = 204/285 (71%), Gaps = 13/285 (4%)
Query: 65 RSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQ 124
+ FWKAGDY P+ S ++H RVHPKFLHSNATSHKWA GA AEL+DNA+DE+
Sbjct: 124 KQFWKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVC 183
Query: 125 NGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSK-KSKTTIGQYGNGF 183
NGAT+V VD + + KD S +L +D+GGGMDP+ IR+CMSLGYS K K TIGQYGNGF
Sbjct: 184 NGATYVNVDMLASKKDGSRMLLVEDNGGGMDPDKIRQCMSLGYSEKSKMANTIGQYGNGF 243
Query: 184 KTSTMRLGADAIVFS--RAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFDISTHWAE 241
KTSTMRLGAD IVFS + + R T+S+GLLSYTFLR TG++D++VPM+D++ +
Sbjct: 244 KTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDYEKDGQGWK 303
Query: 242 PIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLNDEGIYELSF 301
++ +S DDW++N++T++ WSPFS + +L+ QF+ + + GT+++IYNLW +D+G EL+F
Sbjct: 304 KMLRTSLDDWNNNVETVVQWSPFSDEADLLCQFNLLKNQGTRVIIYNLWEDDQGQLELNF 363
Query: 302 DDDAEDIML----RDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
D+D DI + RDE N K+++ ++Y RHSLR
Sbjct: 364 DEDPHDIQIQGVNRDEKN----IKMAQDYPNSTHFLTY--RHSLR 402
>Medtr8g096410.1 | histidine kinase-, DNA gyrase B, putative | HC |
chr8:40447933-40438223 | 20130731
Length = 804
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/285 (52%), Positives = 204/285 (71%), Gaps = 13/285 (4%)
Query: 65 RSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQ 124
+ FWKAGDY P+ S ++H RVHPKFLHSNATSHKWA GA AEL+DNA+DE+
Sbjct: 124 KQFWKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVC 183
Query: 125 NGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSK-KSKTTIGQYGNGF 183
NGAT+V VD + + KD S +L +D+GGGMDP+ IR+CMSLGYS K K TIGQYGNGF
Sbjct: 184 NGATYVNVDMLASKKDGSRMLLVEDNGGGMDPDKIRQCMSLGYSEKSKMANTIGQYGNGF 243
Query: 184 KTSTMRLGADAIVFS--RAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFDISTHWAE 241
KTSTMRLGAD IVFS + + R T+S+GLLSYTFLR TG++D++VPM+D++ +
Sbjct: 244 KTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDYEKDGQGWK 303
Query: 242 PIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLNDEGIYELSF 301
++ +S DDW++N++T++ WSPFS + +L+ QF+ + + GT+++IYNLW +D+G EL+F
Sbjct: 304 KMLRTSLDDWNNNVETVVQWSPFSDEADLLCQFNLLKNQGTRVIIYNLWEDDQGQLELNF 363
Query: 302 DDDAEDIML----RDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
D+D DI + RDE N K+++ ++Y RHSLR
Sbjct: 364 DEDPHDIQIQGVNRDEKN----IKMAQDYPNSTHFLTY--RHSLR 402
>Medtr8g096410.2 | histidine kinase-, DNA gyrase B, putative | HC |
chr8:40447933-40438223 | 20130731
Length = 802
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/285 (52%), Positives = 204/285 (71%), Gaps = 13/285 (4%)
Query: 65 RSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQ 124
+ FWKAGDY P+ S ++H RVHPKFLHSNATSHKWA GA AEL+DNA+DE+
Sbjct: 124 KQFWKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVC 183
Query: 125 NGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSK-KSKTTIGQYGNGF 183
NGAT+V VD + + KD S +L +D+GGGMDP+ IR+CMSLGYS K K TIGQYGNGF
Sbjct: 184 NGATYVNVDMLASKKDGSRMLLVEDNGGGMDPDKIRQCMSLGYSEKSKMANTIGQYGNGF 243
Query: 184 KTSTMRLGADAIVFS--RAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFDISTHWAE 241
KTSTMRLGAD IVFS + + R T+S+GLLSYTFLR TG++D++VPM+D++ +
Sbjct: 244 KTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDYEKDGQGWK 303
Query: 242 PIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLNDEGIYELSF 301
++ +S DDW++N++T++ WSPFS + +L+ QF+ + + GT+++IYNLW +D+G EL+F
Sbjct: 304 KMLRTSLDDWNNNVETVVQWSPFSDEADLLCQFNLLKNQGTRVIIYNLWEDDQGQLELNF 363
Query: 302 DDDAEDIML----RDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
D+D DI + RDE N K+++ ++Y RHSLR
Sbjct: 364 DEDPHDIQIQGVNRDEKN----IKMAQDYPNSTHFLTY--RHSLR 402
>Medtr8g096410.3 | histidine kinase-, DNA gyrase B, putative | HC |
chr8:40447933-40438223 | 20130731
Length = 827
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/285 (52%), Positives = 204/285 (71%), Gaps = 13/285 (4%)
Query: 65 RSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQ 124
+ FWKAGDY P+ S ++H RVHPKFLHSNATSHKWA GA AEL+DNA+DE+
Sbjct: 124 KQFWKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVC 183
Query: 125 NGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSK-KSKTTIGQYGNGF 183
NGAT+V VD + + KD S +L +D+GGGMDP+ IR+CMSLGYS K K TIGQYGNGF
Sbjct: 184 NGATYVNVDMLASKKDGSRMLLVEDNGGGMDPDKIRQCMSLGYSEKSKMANTIGQYGNGF 243
Query: 184 KTSTMRLGADAIVFS--RAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFDISTHWAE 241
KTSTMRLGAD IVFS + + R T+S+GLLSYTFLR TG++D++VPM+D++ +
Sbjct: 244 KTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDYEKDGQGWK 303
Query: 242 PIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLNDEGIYELSF 301
++ +S DDW++N++T++ WSPFS + +L+ QF+ + + GT+++IYNLW +D+G EL+F
Sbjct: 304 KMLRTSLDDWNNNVETVVQWSPFSDEADLLCQFNLLKNQGTRVIIYNLWEDDQGQLELNF 363
Query: 302 DDDAEDIML----RDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
D+D DI + RDE N K+++ ++Y RHSLR
Sbjct: 364 DEDPHDIQIQGVNRDEKN----IKMAQDYPNSTHFLTY--RHSLR 402
>Medtr4g105530.1 | histidine kinase-, DNA gyrase B | HC |
chr4:43806717-43795114 | 20130731
Length = 654
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/298 (53%), Positives = 199/298 (66%), Gaps = 20/298 (6%)
Query: 54 TPASNSAPVYSRSFWKAGDY--VVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGA 111
+P SA R FWKAG+Y +G V + YL VHP FLHSNATSHKW FGA
Sbjct: 80 SPQPISAAPLCRKFWKAGNYDNRLGSKVSSQCAKNYLH---VHPLFLHSNATSHKWVFGA 136
Query: 112 IAELVDNAVDEIQNGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSKK 171
IAEL+DNAVDEI NGATFVKVDKI N KD SP L QDDG GM P ++++CMS G+S K
Sbjct: 137 IAELLDNAVDEIHNGATFVKVDKILNPKDGSPALLIQDDGNGMGPEAMQRCMSFGFSDKI 196
Query: 172 SKTTIGQYGNGFKTSTMRLGADAIVFSRAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMI 231
S+ IGQYGNGFKT +MRLGADAIVFS VN T+S+GLLSYTFL D ++VPM+
Sbjct: 197 SEFAIGQYGNGFKTGSMRLGADAIVFSCHVNDMVCTKSIGLLSYTFLMRAQLDRIVVPMV 256
Query: 232 DFDI--STHWAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDI-GSHGTKILIYN 288
++ ST + E + + Q+ + N+ +LDWSPF S+ E++ QFDDI HGTKI+I+N
Sbjct: 257 NYKCNPSTGYLEKL--NHQEHFKSNMSLLLDWSPFLSEAEIVKQFDDIENHHGTKIIIFN 314
Query: 289 LWLNDEGIYELSFDDDAEDIMLRDETNHGDEKKL----SKKTVQLQSHISYRIRHSLR 342
LW ND+ EL FD D +DI++ GD KK+ ++K V Q ++ R+ HSLR
Sbjct: 315 LWFNDDENLELDFDTDPQDILIA-----GDVKKIDTVPARKRVNEQ-QLANRLHHSLR 366
>Medtr8g076580.1 | histidine kinase-, DNA gyrase B | HC |
chr8:32449766-32453665 | 20130731
Length = 138
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/150 (62%), Positives = 110/150 (73%), Gaps = 16/150 (10%)
Query: 1 MSLIPKTEKDDD-VPVVDLDSTENSXXXXXXXXXXXXXXXXXXXIQVEPPLPKNTPASNS 59
MS++PKTEK+D +PVVDLDS ++ ++ P +N P S
Sbjct: 1 MSIVPKTEKNDTAIPVVDLDSDDDEGTSATMS-------------DIQLPFQQNPPELIS 47
Query: 60 APVYSRS--FWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVD 117
P+ S+S FWKAGDYV GPS KP+ QG+L+HARVHPKFLHSNATSHKWAFGAIAELVD
Sbjct: 48 PPLVSQSQSFWKAGDYVAGPSSKPSPSQGHLDHARVHPKFLHSNATSHKWAFGAIAELVD 107
Query: 118 NAVDEIQNGATFVKVDKIDNMKDNSPVLCF 147
NAVDEIQNGATFVKVDK++NMKDNSPVLCF
Sbjct: 108 NAVDEIQNGATFVKVDKLENMKDNSPVLCF 137
>Medtr5g024810.1 | CW-type zinc finger protein | HC |
chr5:10011299-9997842 | 20130731
Length = 694
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 91 ARVHPKFLHSNATSHK-WAFGAIAELVDNAVD-EIQNGATFVKVDKIDNMKDNSPVLCFQ 148
++ +L + +H W FG IAELVDN+ D + FV++ K+ + P+L
Sbjct: 168 VKIDQSYLKTLGQAHSGWIFGGIAELVDNSSDAKATKMDIFVEMIKLKKSGKDVPMLSVI 227
Query: 149 DDGGGMDPNSIRKCMSLGY--SSKKSKTTIGQYGNGFKTSTMRLGADAIVFSRAVNSSRA 206
DDG GM+ + K +SLG+ S K IG++G GFKT MRLG D +V ++ NS
Sbjct: 228 DDGQGMNHEEVIKMVSLGHKQSGYDDKDQIGRFGVGFKTGAMRLGRDVLVLTQTANS--- 284
Query: 207 TQSVGLLSYTFLRTTGQDDVIVPMIDFDISTHWAEPIIYSSQDDWSD-NLKTILDWSPFS 265
+S+ LS + G+D++ +P++ + E + + + NLK I D SPF+
Sbjct: 285 -RSIAFLSQSL--NEGKDNIEIPIVSYCRQGQQMEVDPSAQSESLAKFNLKAIQDNSPFN 341
Query: 266 -----SKEELMLQFDDIGSHGTKILIYNL 289
K L G GT+I I+NL
Sbjct: 342 KYLIGEKAALF-----CGGTGTQIYIWNL 365