Miyakogusa Predicted Gene

Lj0g3v0314209.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0314209.3 tr|G5ASE5|G5ASE5_HETGA Nucleoporin GLE1
OS=Heterocephalus glaber GN=GW7_01915 PE=4 SV=1,30.34,3e-19,SUBFAMILY
NOT NAMED,NULL; GLE-1-RELATED,GLE1-like; GLE1,GLE1-like,CUFF.21213.3
         (183 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086460.1 | GLE1-like protein | HC | chr3:39172928-3917955...   288   3e-78
Medtr7g034350.1 | GLE1-like protein | HC | chr7:12839802-1283860...   156   1e-38

>Medtr3g086460.1 | GLE1-like protein | HC | chr3:39172928-39179553 |
           20130731
          Length = 619

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 132/179 (73%), Positives = 154/179 (86%)

Query: 1   MDILLAELHRVCPYTVPKHMVYKKSTFHSREAYLKSIGYWEENGKMENTEDYLQRLESYV 60
           MDILLAELH  C YTVPKH+VYKKS F S+EAY +SIGY E+NGK+E+TEDYL+RLESY+
Sbjct: 438 MDILLAELHTACLYTVPKHLVYKKSIFQSKEAYFRSIGYREDNGKLESTEDYLKRLESYM 497

Query: 61  KMYAALVQTEVPKVQNLHGLQHGWAWLSRFFNALSAHQYTAVSLDAFLRMAGFALFRRYK 120
           K+Y ALVQTE+P +QNLHGLQ GWAWL+R  N+L A+QYTAVSL+AFL+MAGFALF+RYK
Sbjct: 498 KVYGALVQTEIPNIQNLHGLQEGWAWLARLLNSLPANQYTAVSLNAFLQMAGFALFKRYK 557

Query: 121 SQFLKMLNVISENFLVDIKSLNAPELRKTVAEIQTYIEDKMFLQEPEGRSLQTNLLSKE 179
           SQFLKMLNVIS+ FLVD+KS N PE  KT A +Q YIEDK FLQ PEGR+LQ+N LS E
Sbjct: 558 SQFLKMLNVISDKFLVDLKSQNIPESAKTTAYMQAYIEDKKFLQVPEGRNLQSNTLSSE 616


>Medtr7g034350.1 | GLE1-like protein | HC | chr7:12839802-12838603 |
           20130731
          Length = 168

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/179 (48%), Positives = 110/179 (61%), Gaps = 44/179 (24%)

Query: 1   MDILLAELHRVCPYTVPKHMVYKKSTFHSREAYLKSIGYWEENGKMEN-TEDYLQRLESY 59
           MDI+LAELH+ C YTVPKHMVYK+S F S+EAY +SIGY  +   +E  T++YL +L+SY
Sbjct: 8   MDIILAELHKACLYTVPKHMVYKESIFQSKEAYFRSIGYQSDGENLEECTKNYLDQLKSY 67

Query: 60  VKMYAALVQTEVPKVQNLHGLQHGWAWLSRFFNALSAHQYTAVSLDAFLRMAGFALFRRY 119
           +K+Y ALVQ                                         MAGFAL++RY
Sbjct: 68  MKLYGALVQ-----------------------------------------MAGFALYKRY 86

Query: 120 KSQFLKMLNVISENFLVDIKSLNAPELRKTVAEIQTYIEDKMFLQEPEGRSLQTNLLSK 178
           KSQFLKML +IS+NFLVD+KS   PEL     E+QT IE+K FLQ P+GRS+Q+  LS+
Sbjct: 87  KSQFLKMLKIISDNFLVDLKSRTVPEL--NYVELQTCIEEKKFLQVPKGRSMQSKPLSR 143