Miyakogusa Predicted Gene

Lj0g3v0314209.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0314209.2 Non Characterized Hit- tr|H2SVR7|H2SVR7_TAKRU
Uncharacterized protein OS=Takifugu rubripes GN=GLE1
P,29.71,8e-19,SUBFAMILY NOT NAMED,NULL; GLE-1-RELATED,GLE1-like;
GLE1,GLE1-like,CUFF.21213.2
         (263 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086460.1 | GLE1-like protein | HC | chr3:39172928-3917955...   365   e-101
Medtr7g034350.1 | GLE1-like protein | HC | chr7:12839802-1283860...   163   1e-40

>Medtr3g086460.1 | GLE1-like protein | HC | chr3:39172928-39179553 |
           20130731
          Length = 619

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/247 (70%), Positives = 204/247 (82%), Gaps = 4/247 (1%)

Query: 13  KGKRDNLLGCARSKASELIKLLNDPQYPQSISVETFAKKVISNSKAPGSAPFASAYVIVL 72
           +G RDN+    RSKASEL+KLLND Q PQS SVE   KKV+ +  +P SAPFA A VIVL
Sbjct: 374 RGIRDNV----RSKASELVKLLNDHQCPQSFSVEMLVKKVVLSCASPASAPFAIASVIVL 429

Query: 73  VTSQVPHAMDILLAELHRVCPYTVPKHMVYKKSTFHSREAYLKSIGYWEENGKMENTEDY 132
           +TSQVP+ MDILLAELH  C YTVPKH+VYKKS F S+EAY +SIGY E+NGK+E+TEDY
Sbjct: 430 ITSQVPYVMDILLAELHTACLYTVPKHLVYKKSIFQSKEAYFRSIGYREDNGKLESTEDY 489

Query: 133 LQRLESYVKMYAALVQTEVPKVQNLHGLQHGWAWLSRFFNALSAHQYTAVSLDAFLRMAG 192
           L+RLESY+K+Y ALVQTE+P +QNLHGLQ GWAWL+R  N+L A+QYTAVSL+AFL+MAG
Sbjct: 490 LKRLESYMKVYGALVQTEIPNIQNLHGLQEGWAWLARLLNSLPANQYTAVSLNAFLQMAG 549

Query: 193 FALFRRYKSQFLKMLNVISENFLVDIKSLNAPELRKTVAEIQTYIEDKMFLQEPEGRSLQ 252
           FALF+RYKSQFLKMLNVIS+ FLVD+KS N PE  KT A +Q YIEDK FLQ PEGR+LQ
Sbjct: 550 FALFKRYKSQFLKMLNVISDKFLVDLKSQNIPESAKTTAYMQAYIEDKKFLQVPEGRNLQ 609

Query: 253 TNLLSKE 259
           +N LS E
Sbjct: 610 SNTLSSE 616


>Medtr7g034350.1 | GLE1-like protein | HC | chr7:12839802-12838603 |
           20130731
          Length = 168

 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/183 (48%), Positives = 114/183 (62%), Gaps = 44/183 (24%)

Query: 77  VPHAMDILLAELHRVCPYTVPKHMVYKKSTFHSREAYLKSIGYWEENGKMEN-TEDYLQR 135
           VP+AMDI+LAELH+ C YTVPKHMVYK+S F S+EAY +SIGY  +   +E  T++YL +
Sbjct: 4   VPYAMDIILAELHKACLYTVPKHMVYKESIFQSKEAYFRSIGYQSDGENLEECTKNYLDQ 63

Query: 136 LESYVKMYAALVQTEVPKVQNLHGLQHGWAWLSRFFNALSAHQYTAVSLDAFLRMAGFAL 195
           L+SY+K+Y ALVQ                                         MAGFAL
Sbjct: 64  LKSYMKLYGALVQ-----------------------------------------MAGFAL 82

Query: 196 FRRYKSQFLKMLNVISENFLVDIKSLNAPELRKTVAEIQTYIEDKMFLQEPEGRSLQTNL 255
           ++RYKSQFLKML +IS+NFLVD+KS   PEL     E+QT IE+K FLQ P+GRS+Q+  
Sbjct: 83  YKRYKSQFLKMLKIISDNFLVDLKSRTVPEL--NYVELQTCIEEKKFLQVPKGRSMQSKP 140

Query: 256 LSK 258
           LS+
Sbjct: 141 LSR 143