Miyakogusa Predicted Gene
- Lj0g3v0312559.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0312559.1 Non Characterized Hit- tr|I1K248|I1K248_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.24,0,LEA_2,Late
embryogenesis abundant protein, LEA-14; seg,NULL,CUFF.21089.1
(322 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g106580.1 | late embryogenesis abundant protein | HC | chr... 239 3e-63
Medtr6g081930.1 | late embryogenesis abundant protein | HC | chr... 216 3e-56
Medtr0154s0010.1 | late embryogenesis abundant protein | HC | sc... 201 5e-52
Medtr4g075730.1 | late embryogenesis abundant protein | HC | chr... 173 3e-43
Medtr3g037650.1 | late embryogenesis abundant protein | LC | chr... 169 2e-42
Medtr2g101870.1 | late embryogenesis abundant protein | HC | chr... 154 2e-37
Medtr6g087880.1 | late embryogenesis abundant protein | HC | chr... 137 1e-32
Medtr8g086610.1 | late embryogenesis abundant protein | LC | chr... 119 6e-27
Medtr4g075730.2 | late embryogenesis abundant protein | HC | chr... 101 1e-21
Medtr4g094800.1 | hypothetical protein | HC | chr4:39022367-3902... 100 1e-21
Medtr3g033530.1 | hypothetical protein | HC | chr3:10750798-1074... 71 1e-12
Medtr7g033535.1 | late embryogenesis abundant hydroxyproline-ric... 58 1e-08
>Medtr8g106580.1 | late embryogenesis abundant protein | HC |
chr8:44974833-44973007 | 20130731
Length = 296
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 176/312 (56%), Gaps = 24/312 (7%)
Query: 16 KTDSEVSSLTQSSPGRSSPRRNAYFVQSPSRESSNDNDAEKTTNSFXXX-----XXXXXX 70
KTDSEV+SL SS RS PRR AY+VQSPS +D EKTT SF
Sbjct: 4 KTDSEVTSLDASSTTRS-PRRPAYYVQSPS------HDGEKTTTSFHSTPVISPMGSPPH 56
Query: 71 XXXXXXXXXXXVGLHSRESASTRYSRKTARKTPWRPRRDPIEEEGLLDPHDEAQLGFPRR 130
L++ ++T+ PW+ D IEEEGLL+ D RR
Sbjct: 57 SHSSSSRFSGSRKLNNNHRSNTK---------PWK-EIDVIEEEGLLNNQDHHH-SLSRR 105
Query: 131 CYFPXXXXXXXXXXXXXXXXXWGASRPQKPSILLKSITFDRFVLQAGADMSGVATSLVSM 190
YF WGASRP KP +++KSI F+ +QAG+D +GVAT ++++
Sbjct: 106 WYFLAFILGFFLLFTLFSLILWGASRPMKPHVMIKSIKFEHVRVQAGSDATGVATDMITV 165
Query: 191 NSTVKLIFRNTATFFGVHVTSTPLDISYYQLTLGTGNMPKFYQSRKSQRSIKVTVKGSHI 250
N+TVK +RN TFFGVHV+STPLD+SY ++ +GTGNM KFYQSR+SQR + V V GS I
Sbjct: 166 NATVKFTYRNKGTFFGVHVSSTPLDLSYSEIVIGTGNMKKFYQSRRSQRLVSVAVMGSKI 225
Query: 251 PLYXXXXXXXXXXXXXXXEALPLKLRVMVRSRGYVLGKLVKPKFNKKIECSVVMDPKKMG 310
PLY +PLKL +RSR YVLGKLVKPK+ KK+ CSVV DPKK+
Sbjct: 226 PLYGSGASLSSTTGMPTL-PVPLKLSFEIRSRAYVLGKLVKPKYYKKVHCSVVFDPKKIN 284
Query: 311 APVSLVNKCIYE 322
VSL C Y+
Sbjct: 285 VSVSLKKSCTYD 296
>Medtr6g081930.1 | late embryogenesis abundant protein | HC |
chr6:30580513-30584032 | 20130731
Length = 294
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 175/311 (56%), Gaps = 24/311 (7%)
Query: 16 KTDSEVSSLTQSSPG---RSSPRRNAYFVQSPSRESSNDNDAEKT-TNSFXXXXXXXXXX 71
KTDSEV++ + ++ RS PRR Y+VQSPS +D EKT T SF
Sbjct: 4 KTDSEVTTTSVATSTSPTRSPPRRPLYYVQSPS------HDGEKTVTTSFHSTPVASPHH 57
Query: 72 XXXXXXXXXXVGLHSRESASTRYSRKTARKTPWRPRRDPIEEEGLLDPHDEAQLGFPRRC 131
+ SAS + + PW+ D IEEEG L+ E G+ RRC
Sbjct: 58 SSSS----------THFSASKKDQQHQHSVNPWK-HIDVIEEEGFLE--KERNGGYSRRC 104
Query: 132 YFPXXXXXXXXXXXXXXXXXWGASRPQKPSILLKSITFDRFVLQAGADMSGVATSLVSMN 191
YF WGASRP KP I++KSI FD +QAG+D +GVAT +++MN
Sbjct: 105 YFLAFVVGFFVLFSLFSLILWGASRPMKPKIVIKSIKFDHVTVQAGSDSTGVATDMITMN 164
Query: 192 STVKLIFRNTATFFGVHVTSTPLDISYYQLTLGTGNMPKFYQSRKSQRSIKVTVKGSHIP 251
ST+K +RNT TFFGVHV++TPL++SY + + +GNM +F+QSR+S R + V V GS +P
Sbjct: 165 STLKFTYRNTGTFFGVHVSATPLELSYSDIVIASGNMKEFHQSRRSHRLVSVAVMGSKVP 224
Query: 252 LYXXXXXXXXXXXXXXXEALPLKLRVMVRSRGYVLGKLVKPKFNKKIECSVVMDPKKMGA 311
LY +PL L ++RSR VLG LVK K+ K+I+CS+ +DPKK+GA
Sbjct: 225 LYGSGASLSSTTGMPTL-PVPLNLNFVMRSRANVLGNLVKHKYYKRIQCSITLDPKKLGA 283
Query: 312 PVSLVNKCIYE 322
VSL N C Y+
Sbjct: 284 LVSLKNSCTYD 294
>Medtr0154s0010.1 | late embryogenesis abundant protein | HC |
scaffold0154:1-1407 | 20130731
Length = 136
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 97/136 (71%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
Query: 187 LVSMNSTVKLIFRNTATFFGVHVTSTPLDISYYQLTLGTGNMPKFYQSRKSQRSIKVTVK 246
+VSMNSTVK+ FRNTATFFGVHV STPLD++YYQLTL TGNMPKFYQSRKSQRSIKV VK
Sbjct: 1 MVSMNSTVKMTFRNTATFFGVHVASTPLDLNYYQLTLATGNMPKFYQSRKSQRSIKVMVK 60
Query: 247 GSHIPLYXXXXXXXXXXXXXXXEALPLKLRVMVRSRGYVLGKLVKPKFNKKIECSVVMDP 306
GSHIPLY E +PL L +MVRS+ YVLG LVKPKFNKKIEC+++MDP
Sbjct: 61 GSHIPLY-GGGARLNTVNGSPVEPVPLTLNIMVRSKAYVLGALVKPKFNKKIECALIMDP 119
Query: 307 KKMGAPVSLVNKCIYE 322
KKMG P+ L NKC YE
Sbjct: 120 KKMGKPIRLTNKCTYE 135
>Medtr4g075730.1 | late embryogenesis abundant protein | HC |
chr4:28960090-28965957 | 20130731
Length = 318
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 1/172 (0%)
Query: 152 WGASRPQKPSILLKSITFDRFVLQAGADMSGVATSLVSMNSTVKLIFRNTATFFGVHVTS 211
WGAS+ KP ++LKSI F+ +Q+G D +GV T ++S+NSTV++++RN ATFFGVHVTS
Sbjct: 147 WGASKSYKPRVILKSIVFENLNVQSGNDGTGVPTDMLSLNSTVRILYRNPATFFGVHVTS 206
Query: 212 TPLDISYYQLTLGTGNMPKFYQSRKSQRSIKVTVKGSHIPLYXXXXXXXXXXXXXXXE-A 270
TP+ +SYYQL L +G + +FYQSRKSQR + V V G +PLY A
Sbjct: 207 TPMQLSYYQLRLASGQIQEFYQSRKSQRKLAVVVHGYQVPLYGGVSVLGNSNTEHINTVA 266
Query: 271 LPLKLRVMVRSRGYVLGKLVKPKFNKKIECSVVMDPKKMGAPVSLVNKCIYE 322
LP+ L VRSR Y+LG+LVK F +I CS+ K+G + + C+Y+
Sbjct: 267 LPMNLTFEVRSRAYILGRLVKSTFYHRIRCSITFHGNKLGNHLDFTDSCVYK 318
>Medtr3g037650.1 | late embryogenesis abundant protein | LC |
chr3:13829626-13832376 | 20130731
Length = 273
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 128/224 (57%), Gaps = 17/224 (7%)
Query: 103 PWRPRRDPIEEEGL-LDPHDEAQL-----GFPRRCYFPXXXXXXXXXXXXXXXXXWGASR 156
PWR + +EE+GL D D+ + G C++ W SR
Sbjct: 56 PWRYQSSNVEEKGLGYDNGDDKCICWGCHGISSFCFY---FSAVFAAVVIPLLVIWAVSR 112
Query: 157 PQKPSILLKSITFDRFVLQAGADMSGVATSLVSMNSTVKLIFRNTATFFGVHVTSTPLDI 216
QKP + L+SITFDR+ ++ G D G TS+V+ NS++KL F NTATF G+HVTS PL++
Sbjct: 113 -QKPDLFLESITFDRYSIEEGIDHYGFNTSMVTTNSSLKLTFTNTATFSGIHVTSIPLEM 171
Query: 217 -SYYQLTLGTGNMPKFYQSRKSQRSIKVTVKGSHIPLYXXXXXXXXXXXXXXXEALPLKL 275
+Y QL + TGN+P FYQ RKS RSI V V+GS IP++ E++PL L
Sbjct: 172 KNYNQLPIATGNIPNFYQRRKSARSIDVKVEGSQIPVH------IAPDDYVLGESIPLTL 225
Query: 276 RVMVRSRGYVLGKLVKPKFNKKIECSVVMDPKKMGAPVSLVNKC 319
++V S+ VL LV KFN IECS+ MD KKMG P+ L N C
Sbjct: 226 NMIVNSKANVLWILVTHKFNMNIECSLYMDTKKMGVPIPLTNTC 269
>Medtr2g101870.1 | late embryogenesis abundant protein | HC |
chr2:43826956-43829452 | 20130731
Length = 309
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 160/319 (50%), Gaps = 24/319 (7%)
Query: 15 AKTDSEVSSLTQSSPGRSSPRRNAYFVQSPSRESSNDNDAEKTTNSFXXXXXXXXXXXXX 74
AK++S+++SL SSP RS P+R Y+VQSPSR+S +D +K+++
Sbjct: 4 AKSESDITSLAPSSPSRS-PKRPVYYVQSPSRDS---HDGDKSSS----MQATPISNSPM 55
Query: 75 XXXXXXXVGLHSRESASTRYS--------RKTARK---TPWRPRRDPIEEEGLLDPHDEA 123
G HSR S+++R+S RK +RK W P I EEG ++
Sbjct: 56 ESPSHPSFGRHSRNSSASRFSGIFRSSSGRKGSRKRNDKGW-PECGVILEEGSYREFED- 113
Query: 124 QLGFPRRCYFPXXXXXXXXXXXXXXXXXWGASRPQKPSILLKSITFDRFVLQAGADMSGV 183
+ F RR WGASRP K + +KS+ + G D +GV
Sbjct: 114 -MSFARRFQALIAVFTFLVVFTVFCLIIWGASRPFKAEVTVKSLAVHNLYVWEGTDHTGV 172
Query: 184 ATSLVSMNSTVKLIFRNTATFFGVHVTSTPLDISYYQLTLGTGNMPKFYQSRKSQRSIKV 243
T ++++NST+ + N ATFFG+HV ++P+++ Y +++ TG + K YQ RKS R + V
Sbjct: 173 PTKILTINSTLHMNIYNPATFFGIHVHTSPINLVYSDISIATGELKKHYQPRKSHRIVSV 232
Query: 244 TVKGSHIPLYXXXXXXXXXXXXXXXEALPLKLRVMVRSRGYVLGKLVKPKFNKKIECSVV 303
++G+ IPLY AL LK +RSRG V+GKLV+ + +K+I C +V
Sbjct: 233 NLEGNKIPLYGAGSTITVSQTGSVEVALVLKFE--IRSRGDVVGKLVRTRHHKEITCPLV 290
Query: 304 MDPKKMGAPVSLVNKCIYE 322
++ N C YE
Sbjct: 291 INSAGTKPIKFKKNSCTYE 309
>Medtr6g087880.1 | late embryogenesis abundant protein | HC |
chr6:33066104-33069639 | 20130731
Length = 307
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 148/308 (48%), Gaps = 8/308 (2%)
Query: 16 KTDSEVSSLTQSSPGRSSPRRNAYFVQSPSRESSNDNDAEKTT--NSFXXXXXXXXXXXX 73
KTDS+V+S SSP S ++ Y+VQSPSRESS+D D T +
Sbjct: 4 KTDSDVTSFDPSSP--RSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHS 61
Query: 74 XXXXXXXXVGLHSRESASTRYSRKTARKTPWRPRRDPIEEEGLLDPHDEAQLGFPRRCYF 133
G ++ + +RK K W + EE G D G RR F
Sbjct: 62 RASSSSRISGGYNSSFLGRKVNRKVNDKG-WIGSKVIEEENGGYGDFDGDGNGVSRRVQF 120
Query: 134 PXXXXXXXXXXXXXXXXXWGASRPQKPSILLKSITFDRFVLQAGADMSGVATSLVSMNST 193
W AS KP + +KS+T F G+D++GV T ++++N +
Sbjct: 121 FVAVVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTKMLTVNCS 180
Query: 194 VKLIFRNTATFFGVHVTSTPLDISYYQLTLGTGNMPKFYQSRKSQRSIKVTVKGSHIPLY 253
++++ N ATFFG++V+S +++ Y LT+ TG + K++Q RKS+R++ V ++GS +PLY
Sbjct: 181 MRMLVHNPATFFGIYVSSKSVNLMYSDLTVATGELKKYHQQRKSRRTVSVNIQGSKVPLY 240
Query: 254 XXXXXXXXXXXXXXXEALPLKLRVMVRSRGYVLGKLVKPKFNKKIECSVVMDPKKMGAPV 313
+ L L V+SRG V+GKLV+ K +++ CS+ +DP
Sbjct: 241 GAGADVASSVDNGK---ISLTLVFEVKSRGNVVGKLVRTKHTQRVSCSIAVDPHNNKYIK 297
Query: 314 SLVNKCIY 321
N+C Y
Sbjct: 298 LKENECRY 305
>Medtr8g086610.1 | late embryogenesis abundant protein | LC |
chr8:35948368-35945564 | 20130731
Length = 279
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 152 WGASRPQKPSILLKSITFDRFVLQAGADMSGVATSLVSMNSTVKLIFRNTATFFGVHVTS 211
W R KP L++I F + +Q G D + V T L+S+NST+ +++ N AT+FGVHVTS
Sbjct: 110 WAVGRSFKPRANLENIVFKKLDVQFGNDRTEVPTYLLSLNSTITMMYTNPATYFGVHVTS 169
Query: 212 TPLDISYYQLTLGTGNMPKFYQSRKSQRSIKVTVKGSHIPLYXXXXXXXXXXXXXXXE-A 270
T L + YY LTL +G M +F+QS KSQ+ + V V +PLY A
Sbjct: 170 TLLQLRYYDLTLASGQMQEFHQSSKSQQKLVVFVSADQVPLYGGISILGNDTIENMNNVA 229
Query: 271 LPLKLRVMVRSRGYVLGKLVKPKFNKKIECSVVMDPKKMGAPVSLVNKCIYE 322
+ + + ++S+ +LG L F + I C + ++G P+SL++ C+Y+
Sbjct: 230 MAMNITFELKSKADILGVL--STFYQTIGCPITFHVNQLGKPLSLIDSCVYK 279
>Medtr4g075730.2 | late embryogenesis abundant protein | HC |
chr4:28960090-28962545 | 20130731
Length = 236
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 60/75 (80%)
Query: 152 WGASRPQKPSILLKSITFDRFVLQAGADMSGVATSLVSMNSTVKLIFRNTATFFGVHVTS 211
WGAS+ KP ++LKSI F+ +Q+G D +GV T ++S+NSTV++++RN ATFFGVHVTS
Sbjct: 147 WGASKSYKPRVILKSIVFENLNVQSGNDGTGVPTDMLSLNSTVRILYRNPATFFGVHVTS 206
Query: 212 TPLDISYYQLTLGTG 226
TP+ +SYYQL L +G
Sbjct: 207 TPMQLSYYQLRLASG 221
>Medtr4g094800.1 | hypothetical protein | HC |
chr4:39022367-39021274 | 20130731
Length = 171
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 86/140 (61%), Gaps = 16/140 (11%)
Query: 3 DNENSSINMSSLAKTDSEVSSLTQSSPGRS-SPRRNAYFVQSPSRESSNDNDAEKTTNSF 61
+N N++I M LAKTDSEVSSLTQSSP RS R Y+VQSPSR+SSND EKTTNSF
Sbjct: 4 ENNNTTITM--LAKTDSEVSSLTQSSPTRSRDGLRAVYYVQSPSRDSSND--GEKTTNSF 59
Query: 62 XXXXXXXXXXXXXXXXXXXXVGLHSRESASTRYS--RKTA------RKTPWRPRRD---P 110
+G HSRES+STRYS RK++ RK WRP +D
Sbjct: 60 NSSPLQSPLGSPPHSHSNSSLGPHSRESSSTRYSASRKSSQASHNNRKGNWRPWKDQFNA 119
Query: 111 IEEEGLLDPHDEAQLGFPRR 130
IEEEGLLD D+A GFPRR
Sbjct: 120 IEEEGLLDDDDDADRGFPRR 139
>Medtr3g033530.1 | hypothetical protein | HC |
chr3:10750798-10747558 | 20130731
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 154 ASRPQKPSILLKSITFDRFVLQAGADMSGVATSLVSMNSTVKLIFRNTATFFGVHVTSTP 213
A++P P I + F L G D +GV T +++ N ++ LI N + FFG+H+
Sbjct: 182 ATKPPTPKISFEIARIPEFKLGEGVDRTGVTTKILTCNCSMNLIVENKSRFFGLHIRPPK 241
Query: 214 LDISYYQLTLGTGNMPKFY-QSRKSQRSIKVTVKGSHIPLYXXXXXXXXXXXXXXXEALP 272
+D+ + L N P+ Y +S + +++ VK P+Y LP
Sbjct: 242 MDMKFSILPFAFSNGPELYAESGLTVFPLQLEVKNK--PMY--GAGRSMEDMLDSGRGLP 297
Query: 273 LKLRVMVRSRGYVLGKLVKPKFNKKIECSVVM 304
+ ++V + S V+ LVKPKF+ ++EC VV+
Sbjct: 298 ILIQVTLSSSFEVVPALVKPKFHHRVECIVVL 329
>Medtr7g033535.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein, putative | LC | chr7:12132402-12132864 |
20130731
Length = 62
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 197 IFRNTATFFGVHVTSTPLDISYYQLTLGTGNMPKFYQSRKSQRSIKVTVKGSHIPL 252
++ N AT FGVHVTST L + YY +G M +F+QS KSQR + V + +H+PL
Sbjct: 1 MYTNPATLFGVHVTSTLLQLRYYD---ASGQMQEFHQSSKSQRKLDVVLFANHVPL 53