Miyakogusa Predicted Gene

Lj0g3v0312339.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0312339.1 Non Characterized Hit- tr|I1LCF2|I1LCF2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58357 PE,78.1,0,domain
in TBC and LysM domain containing pro,TLDc; seg,NULL; NUCLEOLAR
PROTEIN-RELATED,NULL; NUCLEOL,CUFF.21072.1
         (309 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073340.1 | oxidation resistance-like protein | HC | chr1:...   378   e-105
Medtr1g044690.1 | oxidation resistance-like protein | LC | chr1:...   254   9e-68
Medtr8g090235.1 | TLD-domain nucleolar protein | HC | chr8:37877...   187   1e-47
Medtr8g090235.2 | TLD-domain nucleolar protein | HC | chr8:37877...   176   3e-44
Medtr3g087230.1 | TLD-domain nucleolar protein | HC | chr3:39550...   175   5e-44
Medtr3g087230.2 | TLD-domain nucleolar protein | HC | chr3:39550...   175   6e-44
Medtr3g087230.5 | TLD-domain nucleolar protein | HC | chr3:39550...   129   3e-30
Medtr3g087230.3 | TLD-domain nucleolar protein | HC | chr3:39550...   117   1e-26
Medtr3g087230.4 | TLD-domain nucleolar protein | HC | chr3:39550...   117   1e-26
Medtr3g087230.6 | TLD-domain nucleolar protein | HC | chr3:39550...    91   1e-18
Medtr3g087230.7 | TLD-domain nucleolar protein | HC | chr3:39550...    91   1e-18
Medtr1g044700.1 | hypothetical protein | LC | chr1:16881907-1688...    87   3e-17
Medtr7g105640.1 | TLD-domain nucleolar protein | HC | chr7:42847...    57   3e-08
Medtr7g105640.2 | TLD-domain nucleolar protein | HC | chr7:42847...    56   4e-08

>Medtr1g073340.1 | oxidation resistance-like protein | HC |
           chr1:32545325-32549403 | 20130731
          Length = 313

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/316 (63%), Positives = 221/316 (69%), Gaps = 14/316 (4%)

Query: 1   MYSLKDKVTQKLSHLFANSSNTQDSP------YSQEGKXXXXXXXXXXXXXXXDGSKTSK 54
           M++ KDKVTQKLS LF  +S T  S       + +EGK                GS T K
Sbjct: 1   MHAFKDKVTQKLSDLFPTNSPTSFSSSSQASHHPKEGKSLSSYLSYIIPS----GSNTDK 56

Query: 55  HQDNHKPNKSA----YNYENFEYQDVPFDNYVDCSPSCNSRDLLKDEIINXXXXXXXXXX 110
           HQ + K  +S+    YNYE+F+YQDVP D YVDC+P+ NS DL KDEI+N          
Sbjct: 57  HQYDKKATQSSSSSGYNYEDFDYQDVPPDAYVDCNPTSNSIDLTKDEIVNEDHTSIRSSS 116

Query: 111 XXXXXXXXXXXXTPNTSKKSQLNLSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLK 170
                       +PN SKKS  NLSDDS FISPELYEFFESCLPNIVKG QWVLLYS+LK
Sbjct: 117 SSDVFEEANGQQSPNASKKSLRNLSDDSTFISPELYEFFESCLPNIVKGCQWVLLYSTLK 176

Query: 171 HGISLRTLIRKSAELSGPGLLIVGDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIY 230
           HGISLRTLIRKSAELSGP LLIVGDRQGAVFGGLLD PLKPT KRKYQGTNQ+FVFTT+Y
Sbjct: 177 HGISLRTLIRKSAELSGPALLIVGDRQGAVFGGLLDCPLKPTPKRKYQGTNQTFVFTTVY 236

Query: 231 GQPRLFRPTGANRYYYMCXXXXXXXXXXXXXXXXXDEDLLTGTSGPCDTFGNKCLAHSPE 290
           GQPRLFRPTGANRYYYMC                 D DLLTGTSGPCDTFGN+CLAHSPE
Sbjct: 237 GQPRLFRPTGANRYYYMCLNDLLGLGGGGNFALCLDGDLLTGTSGPCDTFGNQCLAHSPE 296

Query: 291 FELKNVELWGFTHASP 306
           FELKN+ELWGFTHA P
Sbjct: 297 FELKNIELWGFTHALP 312


>Medtr1g044690.1 | oxidation resistance-like protein | LC |
           chr1:16875077-16879347 | 20130731
          Length = 295

 Score =  254 bits (648), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 150/312 (48%), Positives = 178/312 (57%), Gaps = 25/312 (8%)

Query: 1   MYSLKDKVTQKLSHLFANSSN--TQDSPYSQEGKXXXXXXXXXXXXXXXDGSKTSKHQD- 57
           MY+LK     K S +F+NS N   Q   YS+EGK                GSKT   Q  
Sbjct: 1   MYNLK---VLKFSRVFSNSFNGPLQVGSYSKEGKSLFSYLSYFITLVSIAGSKTRNLQSV 57

Query: 58  ----NHKPNKSAYNYENFEYQDVPFDNYVDCSPSCNSRDLLKDEIINXXXXXXXXXXXXX 113
                HK N+         +       +V  S   N+ +L+KDEII+             
Sbjct: 58  IARLKHKKNR---------WDHSLLKEHVGSSLLGNTMNLVKDEIIDNENHVHRSDNNSE 108

Query: 114 XXXXXXXXXTPNTSKKSQLNLSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGI 173
                      N  + S L L DDS FIS EL +FFES LP +VKG + VLLYS+LKHGI
Sbjct: 109 DFEEV------NDGQYSSLKLIDDSCFISLELNDFFESNLPKLVKGCKRVLLYSTLKHGI 162

Query: 174 SLRTLIRKSAELSGPGLLIVGDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIYGQP 233
           SLRTLIR S++L+ PGLLIVGD +GAVFG LLD PL PT + KYQGT+Q+FVFT +   P
Sbjct: 163 SLRTLIRNSSQLTTPGLLIVGDMKGAVFGALLDCPLIPTTRPKYQGTHQTFVFTNLDSHP 222

Query: 234 RLFRPTGANRYYYMCXXXXXXXXXXXXXXXXXDEDLLTGTSGPCDTFGNKCLAHSPEFEL 293
           R+FRPTG NRYYY+C                 D DLLTGTSGPCDTF N CLAH+PEFE+
Sbjct: 223 RIFRPTGVNRYYYLCSNDSFAFGGGGGFALYLDGDLLTGTSGPCDTFENHCLAHTPEFEI 282

Query: 294 KNVELWGFTHAS 305
           KNVELWGFTH S
Sbjct: 283 KNVELWGFTHTS 294


>Medtr8g090235.1 | TLD-domain nucleolar protein | HC |
           chr8:37877746-37873858 | 20130731
          Length = 356

 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/172 (50%), Positives = 114/172 (66%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           LS+ S  IS  L       LP ++ G++W+++YS+ KHGISL TL R+S    GP LL+V
Sbjct: 166 LSEPSMLISNSLRNVVYDALPALIHGKKWLMMYSTWKHGISLSTLYRRSMLWPGPSLLVV 225

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIYGQPRLFRPTGANRYYYMCXXXXX 253
           GDR+GAVFGGL++ PL+P+ KRKYQGTN +FVFT I G P ++RPTG NRY+ +C     
Sbjct: 226 GDRKGAVFGGLVEAPLRPSNKRKYQGTNSTFVFTNISGHPVVYRPTGVNRYFTLCTTDFL 285

Query: 254 XXXXXXXXXXXXDEDLLTGTSGPCDTFGNKCLAHSPEFELKNVELWGFTHAS 305
                       + DLL G+S   +T+GN CLAHSPEF++K VELWGF   S
Sbjct: 286 AIGGGGHFALYLEGDLLNGSSSVSETYGNPCLAHSPEFQVKEVELWGFVFPS 337


>Medtr8g090235.2 | TLD-domain nucleolar protein | HC |
           chr8:37877746-37873858 | 20130731
          Length = 360

 Score =  176 bits (445), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 110/165 (66%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           LS+ S  IS  L       LP ++ G++W+++YS+ KHGISL TL R+S    GP LL+V
Sbjct: 166 LSEPSMLISNSLRNVVYDALPALIHGKKWLMMYSTWKHGISLSTLYRRSMLWPGPSLLVV 225

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIYGQPRLFRPTGANRYYYMCXXXXX 253
           GDR+GAVFGGL++ PL+P+ KRKYQGTN +FVFT I G P ++RPTG NRY+ +C     
Sbjct: 226 GDRKGAVFGGLVEAPLRPSNKRKYQGTNSTFVFTNISGHPVVYRPTGVNRYFTLCTTDFL 285

Query: 254 XXXXXXXXXXXXDEDLLTGTSGPCDTFGNKCLAHSPEFELKNVEL 298
                       + DLL G+S   +T+GN CLAHSPEF++K VE+
Sbjct: 286 AIGGGGHFALYLEGDLLNGSSSVSETYGNPCLAHSPEFQVKEVEV 330


>Medtr3g087230.1 | TLD-domain nucleolar protein | HC |
           chr3:39550451-39547457 | 20130731
          Length = 372

 Score =  175 bits (443), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 114/172 (66%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           +S+ S  +S  +     + LP ++ GR+W+LLYS+ ++GISL TL R+S    G  LL+V
Sbjct: 182 ISEPSVLVSKSIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVV 241

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIYGQPRLFRPTGANRYYYMCXXXXX 253
           GD++GAVFG L++ PLKP++KRKYQGTN ++VF+ I G+P ++ PTG NRY+ +C     
Sbjct: 242 GDKKGAVFGSLVETPLKPSSKRKYQGTNSTYVFSNISGRPIIYHPTGVNRYFTLCNTDYI 301

Query: 254 XXXXXXXXXXXXDEDLLTGTSGPCDTFGNKCLAHSPEFELKNVELWGFTHAS 305
                       D DLL G+S   +TFGN CLA+S +FE+K VELWGF H S
Sbjct: 302 AIGGGGHFALYLDGDLLNGSSSVSETFGNPCLANSQDFEVKEVELWGFVHTS 353


>Medtr3g087230.2 | TLD-domain nucleolar protein | HC |
           chr3:39550456-39547457 | 20130731
          Length = 371

 Score =  175 bits (443), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 114/172 (66%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           +S+ S  +S  +     + LP ++ GR+W+LLYS+ ++GISL TL R+S    G  LL+V
Sbjct: 181 ISEPSVLVSKSIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVV 240

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIYGQPRLFRPTGANRYYYMCXXXXX 253
           GD++GAVFG L++ PLKP++KRKYQGTN ++VF+ I G+P ++ PTG NRY+ +C     
Sbjct: 241 GDKKGAVFGSLVETPLKPSSKRKYQGTNSTYVFSNISGRPIIYHPTGVNRYFTLCNTDYI 300

Query: 254 XXXXXXXXXXXXDEDLLTGTSGPCDTFGNKCLAHSPEFELKNVELWGFTHAS 305
                       D DLL G+S   +TFGN CLA+S +FE+K VELWGF H S
Sbjct: 301 AIGGGGHFALYLDGDLLNGSSSVSETFGNPCLANSQDFEVKEVELWGFVHTS 352


>Medtr3g087230.5 | TLD-domain nucleolar protein | HC |
           chr3:39550456-39547457 | 20130731
          Length = 316

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 84/115 (73%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           +S+ S  +S  +     + LP ++ GR+W+LLYS+ ++GISL TL R+S    G  LL+V
Sbjct: 181 ISEPSVLVSKSIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVV 240

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIYGQPRLFRPTGANRYYYMC 248
           GD++GAVFG L++ PLKP++KRKYQGTN ++VF+ I G+P ++ PTG NRY+ +C
Sbjct: 241 GDKKGAVFGSLVETPLKPSSKRKYQGTNSTYVFSNISGRPIIYHPTGVNRYFTLC 295


>Medtr3g087230.3 | TLD-domain nucleolar protein | HC |
           chr3:39550451-39547457 | 20130731
          Length = 291

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 78/107 (72%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           +S+ S  +S  +     + LP ++ GR+W+LLYS+ ++GISL TL R+S    G  LL+V
Sbjct: 181 ISEPSVLVSKSIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVV 240

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIYGQPRLFRPTG 240
           GD++GAVFG L++ PLKP++KRKYQGTN ++VF+ I G+P ++ PTG
Sbjct: 241 GDKKGAVFGSLVETPLKPSSKRKYQGTNSTYVFSNISGRPIIYHPTG 287


>Medtr3g087230.4 | TLD-domain nucleolar protein | HC |
           chr3:39550451-39547457 | 20130731
          Length = 292

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 78/107 (72%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           +S+ S  +S  +     + LP ++ GR+W+LLYS+ ++GISL TL R+S    G  LL+V
Sbjct: 182 ISEPSVLVSKSIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVV 241

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQGTNQSFVFTTIYGQPRLFRPTG 240
           GD++GAVFG L++ PLKP++KRKYQGTN ++VF+ I G+P ++ PTG
Sbjct: 242 GDKKGAVFGSLVETPLKPSSKRKYQGTNSTYVFSNISGRPIIYHPTG 288


>Medtr3g087230.6 | TLD-domain nucleolar protein | HC |
           chr3:39550451-39547457 | 20130731
          Length = 280

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 61/85 (71%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           +S+ S  +S  +     + LP ++ GR+W+LLYS+ ++GISL TL R+S    G  LL+V
Sbjct: 182 ISEPSVLVSKSIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVV 241

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQ 218
           GD++GAVFG L++ PLKP++KRKYQ
Sbjct: 242 GDKKGAVFGSLVETPLKPSSKRKYQ 266


>Medtr3g087230.7 | TLD-domain nucleolar protein | HC |
           chr3:39550456-39547452 | 20130731
          Length = 279

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 61/85 (71%)

Query: 134 LSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAELSGPGLLIV 193
           +S+ S  +S  +     + LP ++ GR+W+LLYS+ ++GISL TL R+S    G  LL+V
Sbjct: 181 ISEPSVLVSKSIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVV 240

Query: 194 GDRQGAVFGGLLDFPLKPTAKRKYQ 218
           GD++GAVFG L++ PLKP++KRKYQ
Sbjct: 241 GDKKGAVFGSLVETPLKPSSKRKYQ 265


>Medtr1g044700.1 | hypothetical protein | LC |
           chr1:16881907-16883995 | 20130731
          Length = 193

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 58/83 (69%)

Query: 125 NTSKKSQLNLSDDSAFISPELYEFFESCLPNIVKGRQWVLLYSSLKHGISLRTLIRKSAE 184
           N  + S   L DDS FIS EL +FFES LP +VKG + VL+YS+LKHGISLRTL R SA+
Sbjct: 29  NDGQYSSFKLIDDSCFISLELNDFFESSLPKLVKGCKRVLIYSTLKHGISLRTLTRNSAQ 88

Query: 185 LSGPGLLIVGDRQGAVFGGLLDF 207
           L+ PGLL++G+    +   +L+ 
Sbjct: 89  LTTPGLLVLGELSVGIVVLMLEI 111


>Medtr7g105640.1 | TLD-domain nucleolar protein | HC |
           chr7:42847555-42843000 | 20130731
          Length = 421

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 12/152 (7%)

Query: 162 WVLLYSSLKHGISLRTLIRKSAELSGPGLLIVGDRQGAVFGGLLDFPLKPTAKRKYQGTN 221
           W+LLY S  +G+S  T +   +   GP +LI+ D+ G ++GG      +  A  ++ G  
Sbjct: 239 WMLLYHSSVNGLSFNTFLGNISNHEGPTVLILKDKDGYIYGGYASQQWERHA--EFYGDM 296

Query: 222 QSFVFTTIYGQPRLFRPTGANRYYYMCXXXXXXXXXXXXXXXXXDEDLL---------TG 272
           + ++F  +  +  +FRPTGAN     C                  E+            G
Sbjct: 297 KCYIF-QLNPKASIFRPTGANTNLQWCAVNFSSEEIPNGIGFGGRENHFGLFISANFDQG 355

Query: 273 TSGPCDTFGNKCLAHSPEFELKNVELWGFTHA 304
            +  C TFG+ CL+ +     + +E WG T  
Sbjct: 356 HTFSCSTFGSPCLSKTNRIVPEVIECWGVTQG 387


>Medtr7g105640.2 | TLD-domain nucleolar protein | HC |
           chr7:42847488-42843003 | 20130731
          Length = 357

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 12/152 (7%)

Query: 162 WVLLYSSLKHGISLRTLIRKSAELSGPGLLIVGDRQGAVFGGLLDFPLKPTAKRKYQGTN 221
           W+LLY S  +G+S  T +   +   GP +LI+ D+ G ++GG      +  A  ++ G  
Sbjct: 175 WMLLYHSSVNGLSFNTFLGNISNHEGPTVLILKDKDGYIYGGYASQQWERHA--EFYGDM 232

Query: 222 QSFVFTTIYGQPRLFRPTGANRYYYMCXXXXXXXXXXXXXXXXXDEDLL---------TG 272
           + ++F  +  +  +FRPTGAN     C                  E+            G
Sbjct: 233 KCYIF-QLNPKASIFRPTGANTNLQWCAVNFSSEEIPNGIGFGGRENHFGLFISANFDQG 291

Query: 273 TSGPCDTFGNKCLAHSPEFELKNVELWGFTHA 304
            +  C TFG+ CL+ +     + +E WG T  
Sbjct: 292 HTFSCSTFGSPCLSKTNRIVPEVIECWGVTQG 323