Miyakogusa Predicted Gene

Lj0g3v0312029.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0312029.1 Non Characterized Hit- tr|I1MI74|I1MI74_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57825
PE,87.18,0,seg,NULL; Pro_isomerase,Cyclophilin-like peptidyl-prolyl
cis-trans isomerase domain; RRM_1,RNA recog,CUFF.21055.1
         (237 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g442420.1 | peptidyl-prolyl cis-trans isomerase-like prote...   384   e-107
Medtr6g084140.2 | peptidyl-prolyl cis-trans isomerase-like prote...   378   e-105
Medtr6g084140.1 | peptidyl-prolyl cis-trans isomerase-like prote...   378   e-105
Medtr7g082150.1 | U1 small nuclear ribonucleoprotein | LC | chr7...    59   3e-09
Medtr3g109090.1 | nucleolysin TIAR-like protein | HC | chr3:5042...    54   1e-07
Medtr3g109090.2 | nucleolysin TIAR-like protein | HC | chr3:5042...    54   1e-07
Medtr3g109090.3 | nucleolysin TIAR-like protein | HC | chr3:5042...    54   1e-07
Medtr4g085540.1 | polyadenylate-binding protein | HC | chr4:3341...    53   2e-07
Medtr7g013730.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    53   3e-07
Medtr7g013730.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    53   3e-07
Medtr4g117350.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    52   5e-07
Medtr6g040190.1 | polyadenylate-binding protein | LC | chr6:1440...    52   7e-07
Medtr7g102730.1 | polyadenylate-binding protein | HC | chr7:4165...    51   9e-07
Medtr1g097440.2 | polyadenylate-binding protein | HC | chr1:4396...    51   1e-06
Medtr1g097440.1 | polyadenylate-binding protein | HC | chr1:4396...    51   1e-06
Medtr1g061870.1 | polyadenylate-binding plant protein, putative ...    49   4e-06

>Medtr8g442420.1 | peptidyl-prolyl cis-trans isomerase-like protein
           | HC | chr8:16036627-16029239 | 20130731
          Length = 605

 Score =  384 bits (986), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/237 (78%), Positives = 199/237 (83%)

Query: 1   MASAGQNLNASQFYITLRDDLDYLDGKHTXXXXXXXXXXXLTRINEAYVDEKSRPYKNIR 60
           MASAG+NLNASQFYITLRDDLDYLDGKHT           LTRINEAY D K RP+KNIR
Sbjct: 96  MASAGENLNASQFYITLRDDLDYLDGKHTVFGEVAEGFETLTRINEAYADGKGRPFKNIR 155

Query: 61  IMHTYILDDPFVDPPELTEFIPDASPEGKCKXXXXXXXXXXXXXXPMDEQLNPAELEEVI 120
           I HTYIL+DPF DPP+L+EFIPDASPEGK K              PMDEQLNP ELEEVI
Sbjct: 156 IKHTYILEDPFDDPPQLSEFIPDASPEGKPKDEVDDEVRLEDDWVPMDEQLNPGELEEVI 215

Query: 121 KTKEAHSRAVVLESIGDIPDADIKPPDNVLFICKLNPVTEDADLHTIFSQFGTVSSAEII 180
           ++KEAHSRAVVLESIGDIPDA++KPPDNVLF+CKLNPVTED DLHTIFS+FGTVSSAEII
Sbjct: 216 RSKEAHSRAVVLESIGDIPDAEVKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVSSAEII 275

Query: 181 RDQKTGDSLCYAFIEFEDKQACEQAYFKMDNALIDDRRIHVDFSQSVSKEWPKYIPK 237
           RD KTGDSLCYAFIEFEDK ACEQAYFKMDNALIDDRRIHVDFSQSVSK W +Y+ K
Sbjct: 276 RDHKTGDSLCYAFIEFEDKLACEQAYFKMDNALIDDRRIHVDFSQSVSKLWSQYMRK 332


>Medtr6g084140.2 | peptidyl-prolyl cis-trans isomerase-like protein
           | HC | chr6:31429321-31436291 | 20130731
          Length = 604

 Score =  378 bits (971), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/237 (77%), Positives = 198/237 (83%)

Query: 1   MASAGQNLNASQFYITLRDDLDYLDGKHTXXXXXXXXXXXLTRINEAYVDEKSRPYKNIR 60
           MASAG+NLNASQFYITLRDDLDYLDGKHT           LTRINEAY D K RP+KNIR
Sbjct: 96  MASAGENLNASQFYITLRDDLDYLDGKHTVFGEVAEGFETLTRINEAYADGKGRPFKNIR 155

Query: 61  IMHTYILDDPFVDPPELTEFIPDASPEGKCKXXXXXXXXXXXXXXPMDEQLNPAELEEVI 120
           I HTYIL+DPF DPP+L EFIP+ASP+GK K              PMDEQLNP ELEEVI
Sbjct: 156 IKHTYILEDPFDDPPQLPEFIPEASPDGKPKDEVDDEVRLEDDWVPMDEQLNPGELEEVI 215

Query: 121 KTKEAHSRAVVLESIGDIPDADIKPPDNVLFICKLNPVTEDADLHTIFSQFGTVSSAEII 180
           ++KEAHSRAVVLESIGDIPDA++KPPDNVLF+CKLNPVTED DLHTIFS+FGTVSSAEII
Sbjct: 216 RSKEAHSRAVVLESIGDIPDAEVKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVSSAEII 275

Query: 181 RDQKTGDSLCYAFIEFEDKQACEQAYFKMDNALIDDRRIHVDFSQSVSKEWPKYIPK 237
           RD KTGDSLCYAFIEFEDK ACEQAYFKMDNALIDDRRIHVDFSQSV+K W +Y+ K
Sbjct: 276 RDHKTGDSLCYAFIEFEDKLACEQAYFKMDNALIDDRRIHVDFSQSVAKLWSQYMRK 332


>Medtr6g084140.1 | peptidyl-prolyl cis-trans isomerase-like protein
           | HC | chr6:31429739-31435838 | 20130731
          Length = 621

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/237 (77%), Positives = 198/237 (83%)

Query: 1   MASAGQNLNASQFYITLRDDLDYLDGKHTXXXXXXXXXXXLTRINEAYVDEKSRPYKNIR 60
           MASAG+NLNASQFYITLRDDLDYLDGKHT           LTRINEAY D K RP+KNIR
Sbjct: 113 MASAGENLNASQFYITLRDDLDYLDGKHTVFGEVAEGFETLTRINEAYADGKGRPFKNIR 172

Query: 61  IMHTYILDDPFVDPPELTEFIPDASPEGKCKXXXXXXXXXXXXXXPMDEQLNPAELEEVI 120
           I HTYIL+DPF DPP+L EFIP+ASP+GK K              PMDEQLNP ELEEVI
Sbjct: 173 IKHTYILEDPFDDPPQLPEFIPEASPDGKPKDEVDDEVRLEDDWVPMDEQLNPGELEEVI 232

Query: 121 KTKEAHSRAVVLESIGDIPDADIKPPDNVLFICKLNPVTEDADLHTIFSQFGTVSSAEII 180
           ++KEAHSRAVVLESIGDIPDA++KPPDNVLF+CKLNPVTED DLHTIFS+FGTVSSAEII
Sbjct: 233 RSKEAHSRAVVLESIGDIPDAEVKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVSSAEII 292

Query: 181 RDQKTGDSLCYAFIEFEDKQACEQAYFKMDNALIDDRRIHVDFSQSVSKEWPKYIPK 237
           RD KTGDSLCYAFIEFEDK ACEQAYFKMDNALIDDRRIHVDFSQSV+K W +Y+ K
Sbjct: 293 RDHKTGDSLCYAFIEFEDKLACEQAYFKMDNALIDDRRIHVDFSQSVAKLWSQYMRK 349


>Medtr7g082150.1 | U1 small nuclear ribonucleoprotein | LC |
           chr7:31471924-31467830 | 20130731
          Length = 566

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 6/114 (5%)

Query: 128 RAVVLESIGDI-PDADIKP---PDNVLFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQ 183
           RA +  SIG   P  D K    P   LF+ +L+ +T +  L  + S+FG V +  ++RD 
Sbjct: 39  RAQLCSSIGLYDPFGDPKATGDPYCTLFVGRLSRLTTEETLRKVMSEFGQVKNLRLVRDI 98

Query: 184 KTGDSLCYAFIEFEDKQACEQAYFKMDNALIDDRRIHVDFSQSVSKEWPKYIPK 237
            TG S  YAF+EFE ++   +AY    + ++DD  I VD+++   +  P +IP+
Sbjct: 99  VTGASRGYAFVEFETEREMRRAYMDAHHLIVDDCEIIVDYNR--QQLMPGWIPR 150


>Medtr3g109090.1 | nucleolysin TIAR-like protein | HC |
           chr3:50427006-50436985 | 20130731
          Length = 440

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           +F+  L+P   DA L   FS + T S A ++ D KTG S  Y F+ F D Q  + A   M
Sbjct: 147 VFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDM 206

Query: 210 DNALIDDRRIHVDFS 224
               + +R+I  +++
Sbjct: 207 TGKWLGNRQIRCNWA 221


>Medtr3g109090.2 | nucleolysin TIAR-like protein | HC |
           chr3:50426599-50437301 | 20130731
          Length = 440

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           +F+  L+P   DA L   FS + T S A ++ D KTG S  Y F+ F D Q  + A   M
Sbjct: 147 VFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDM 206

Query: 210 DNALIDDRRIHVDFS 224
               + +R+I  +++
Sbjct: 207 TGKWLGNRQIRCNWA 221


>Medtr3g109090.3 | nucleolysin TIAR-like protein | HC |
           chr3:50426665-50437301 | 20130731
          Length = 424

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           +F+  L+P   DA L   FS + T S A ++ D KTG S  Y F+ F D Q  + A   M
Sbjct: 131 VFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDM 190

Query: 210 DNALIDDRRIHVDFS 224
               + +R+I  +++
Sbjct: 191 TGKWLGNRQIRCNWA 205


>Medtr4g085540.1 | polyadenylate-binding protein | HC |
           chr4:33416965-33423437 | 20130731
          Length = 654

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 148 NVLFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYF 207
           N +F+  L+  T D +L   F +FGT++SA ++RD   G S C+ F+ FE      +A  
Sbjct: 213 NNVFVKNLSESTTDDELKKTFGEFGTITSAVVMRD-GDGKSKCFGFVNFESTDDAARAVE 271

Query: 208 KMDNALIDDRRIHVDFSQSVSKE 230
            ++   IDD+  +V  +Q  S+ 
Sbjct: 272 ALNGKKIDDKEWYVGKAQKKSER 294



 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 1/72 (1%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           +FI  L+   +   LH  FS FG + S ++  D  +G S  Y F++F+ ++A ++A  K+
Sbjct: 124 IFIKNLDKAIDHKALHDTFSSFGNILSCKVAVD-GSGQSKGYGFVQFDTEEAAQKAIEKL 182

Query: 210 DNALIDDRRIHV 221
           +  L++D++++V
Sbjct: 183 NGMLLNDKQVYV 194


>Medtr7g013730.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:3986546-3983001 | 20130731
          Length = 253

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           LFI  ++  T++  L   FS++G V  A+II D+ TG S  + FI F   +    A   M
Sbjct: 42  LFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQAM 101

Query: 210 DNALIDDRRIHVDFS 224
           DN  +D R + V+++
Sbjct: 102 DNKELDGRTVRVNYA 116


>Medtr7g013730.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:3986488-3983001 | 20130731
          Length = 253

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           LFI  ++  T++  L   FS++G V  A+II D+ TG S  + FI F   +    A   M
Sbjct: 42  LFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQAM 101

Query: 210 DNALIDDRRIHVDFS 224
           DN  +D R + V+++
Sbjct: 102 DNKELDGRTVRVNYA 116


>Medtr4g117350.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr4:48659959-48661848 | 20130731
          Length = 162

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 45/81 (55%)

Query: 145 PPDNVLFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQ 204
           P    +FI  L   T +  L  +FS FG V+  +++ D+KTG SL +A+I F ++ + + 
Sbjct: 68  PSSTKIFIKGLPLSTTELHLTKVFSMFGEVTQVKLLIDKKTGQSLGFAYIWFVEEDSAQS 127

Query: 205 AYFKMDNALIDDRRIHVDFSQ 225
           A  +M+  L   R I+V  ++
Sbjct: 128 AAKEMNGKLFYGRFIYVTIAK 148


>Medtr6g040190.1 | polyadenylate-binding protein | LC |
           chr6:14408733-14404765 | 20130731
          Length = 623

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           LFI  L    ++  LH  FS FG V S ++  D   G S  + F++F++ Q+ + A  K+
Sbjct: 115 LFIKNLETSIDNKALHETFSVFGNVLSCKVAMD-SNGHSKGHGFVQFDNDQSAKNAIEKL 173

Query: 210 DNALIDDRRIHVD-FSQSVSKEWPKY 234
           D  L++D++++V  F +   +  PK+
Sbjct: 174 DGMLMNDKKVYVGYFVRCQERSSPKF 199


>Medtr7g102730.1 | polyadenylate-binding protein | HC |
           chr7:41652502-41656607 | 20130731
          Length = 629

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           L++  L+P   D+ LH  FS F T++S  I RD  +G SLCY ++ F       +A    
Sbjct: 12  LYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLSPHDAIRAIEVK 71

Query: 210 DNALIDDRRIHVDFSQ 225
           +++ ++ + I V +S+
Sbjct: 72  NHSTLNGKAIRVMWSR 87


>Medtr1g097440.2 | polyadenylate-binding protein | HC |
           chr1:43966152-43970565 | 20130731
          Length = 646

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           +FI  L+   +   LH  F+ FG V S ++  D   G S  Y F++F++++A + A  ++
Sbjct: 120 VFIKNLDTSIDHKALHDTFAAFGPVLSCKVALD-GNGQSKGYGFVQFDNEEAAKSAIKQL 178

Query: 210 DNALIDDRRIHVDF 223
           D  LI+D++++V F
Sbjct: 179 DGMLINDKQVYVGF 192


>Medtr1g097440.1 | polyadenylate-binding protein | HC |
           chr1:43966161-43970565 | 20130731
          Length = 646

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 150 LFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDKQACEQAYFKM 209
           +FI  L+   +   LH  F+ FG V S ++  D   G S  Y F++F++++A + A  ++
Sbjct: 120 VFIKNLDTSIDHKALHDTFAAFGPVLSCKVALD-GNGQSKGYGFVQFDNEEAAKSAIKQL 178

Query: 210 DNALIDDRRIHVDF 223
           D  LI+D++++V F
Sbjct: 179 DGMLINDKQVYVGF 192


>Medtr1g061870.1 | polyadenylate-binding plant protein, putative |
           HC | chr1:27029234-27025443 | 20130731
          Length = 522

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 140 DADIKPPDNVLFICKLNPVTEDADLHTIFSQFGTVSSAEIIRDQKTGDSLCYAFIEFEDK 199
           DA    P   L++  L+    DA L+  FS+F T+ SA + +D  TG SLCY ++     
Sbjct: 7   DAVPASPAATLYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYVNLSSH 66

Query: 200 QACEQAYFKMDNALIDDRRIHV 221
           Q   +A    +++ ++ + I V
Sbjct: 67  QEAIRAIELKNHSSLNGKVIRV 88