Miyakogusa Predicted Gene

Lj0g3v0311969.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311969.1 Non Characterized Hit- tr|C6T4T9|C6T4T9_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,44.09,0.000002,seg,NULL,CUFF.21049.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g070055.1 | RALF related | HC | chr8:29736367-29737103 | 2...    81   3e-16
Medtr7g028442.1 | RALF related | HC | chr7:9648666-9648314 | 201...    67   3e-12
Medtr4g036880.1 | RALF related | HC | chr4:13519692-13519177 | 2...    67   3e-12
Medtr7g028468.1 | Nodule Cysteine-Rich (NCR) secreted peptide | ...    66   6e-12
Medtr4g036950.1 | RALF related | HC | chr4:13564082-13562176 | 2...    66   6e-12
Medtr4g037645.1 | RALF related | HC | chr4:13864390-13864994 | 2...    65   2e-11
Medtr7g028462.1 | RALF related | HC | chr7:9683565-9683225 | 201...    62   8e-11
Medtr4g036935.1 | RALF related | HC | chr4:13549956-13549344 | 2...    62   8e-11
Medtr4g037655.1 | RALF related | HC | chr4:13870855-13871525 | 2...    61   3e-10
Medtr7g028435.1 | RALF related | HC | chr7:9638357-9638788 | 201...    61   3e-10
Medtr4g037005.1 | RALF related | HC | chr4:13598888-13598310 | 2...    61   3e-10
Medtr4g037615.1 | RALF related | HC | chr4:13848509-13849134 | 2...    60   3e-10
Medtr7g028465.1 | RALF related | HC | chr7:9690514-9690107 | 201...    58   2e-09
Medtr4g036945.1 | RALF related | HC | chr4:13556920-13556343 | 2...    58   2e-09
Medtr4g037005.2 | RALF related | HC | chr4:13599035-13598254 | 2...    57   4e-09
Medtr4g036990.1 | transmembrane protein, putative | HC | chr4:13...    57   4e-09

>Medtr8g070055.1 | RALF related | HC | chr8:29736367-29737103 |
          20130731
          Length = 84

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 12/94 (12%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASK+CSLIWV+LFLC+L  S KA ARNI   GA+E+Y  S DEI   +R+LL       
Sbjct: 1  MASKKCSLIWVILFLCMLGLSVKAIARNI--VGATEMYAVS-DEIMGQNRKLL------- 50

Query: 61 XXXXXCSRGRIAYAVSPVKS--HAENDPRCHNYL 92
               C RG+I Y +  V +   A N+PRCH+YL
Sbjct: 51 SPDQRCKRGKIHYNLHDVMTDRKASNNPRCHHYL 84


>Medtr7g028442.1 | RALF related | HC | chr7:9648666-9648314 |
          20130731
          Length = 78

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 14/92 (15%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          M+SKR  LIW VLFLCVL FS K  ARNI     SE Y  +N E+G  ++R L Q     
Sbjct: 1  MSSKRFFLIWGVLFLCVLSFSTKPLARNI--PNVSEFYSGAN-EMG-PNKRFLGQ----E 52

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNYL 92
               C RG + YAV       ++DPRCH+YL
Sbjct: 53 NKRPPCKRGIVTYAVR------QDDPRCHHYL 78


>Medtr4g036880.1 | RALF related | HC | chr4:13519692-13519177 |
          20130731
          Length = 78

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 14/92 (15%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          M+SKR  LIW VLFLCVL FS K  ARNI     SE Y  +N E+G  ++R L Q     
Sbjct: 1  MSSKRFFLIWGVLFLCVLSFSTKPLARNI--PNVSEFYSGAN-EMG-PNKRFLGQ----E 52

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNYL 92
               C RG + YAV       ++DPRCH+YL
Sbjct: 53 NKRPPCKRGIVTYAVR------QDDPRCHHYL 78


>Medtr7g028468.1 | Nodule Cysteine-Rich (NCR) secreted peptide |
          HC | chr7:9697644-9696114 | 20130731
          Length = 78

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 14/92 (15%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASK+C L++VVLF C+L FSAK  ARNI    +SELY A +DE G+ ++RLL +     
Sbjct: 1  MASKKCLLVFVVLFFCILSFSAKTLARNI--VDSSELY-AFSDEKGL-NKRLLQE----- 51

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNYL 92
               C RG+           A ++PRCHNYL
Sbjct: 52 NRRAPCKRGK-----RDQMRQARDNPRCHNYL 78


>Medtr4g036950.1 | RALF related | HC | chr4:13564082-13562176 |
          20130731
          Length = 78

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 14/92 (15%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASK+C L++VVLF C+L FSAK  ARNI    +SELY A +DE G+ ++RLL +     
Sbjct: 1  MASKKCLLVFVVLFFCILSFSAKTLARNI--VDSSELY-AFSDEKGL-NKRLLQE----- 51

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNYL 92
               C RG+           A ++PRCHNYL
Sbjct: 52 NRRAPCKRGK-----RDQMRQARDNPRCHNYL 78


>Medtr4g037645.1 | RALF related | HC | chr4:13864390-13864994 |
          20130731
          Length = 96

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 10/99 (10%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASK+CSLI VVLF+C+L FS+KA ARNI    AS+LY  S DEIG++ +RLL       
Sbjct: 1  MASKKCSLILVVLFICLLSFSSKALARNI--PNASKLYLFS-DEIGLNKKRLLASVKPKP 57

Query: 61 XXX-----XXCSRGRIAYAVSPVKSHAE--NDPRCHNYL 92
                     ++ R+       ++H    + PRCHNYL
Sbjct: 58 DNARGHNYADLNKKRLLSEKCGSRTHQPHADRPRCHNYL 96


>Medtr7g028462.1 | RALF related | HC | chr7:9683565-9683225 |
          20130731
          Length = 75

 Score = 62.4 bits (150), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 17/92 (18%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASKRCSLIWVVL L +L FS+KA ARNI      +L   S DE+G  ++RLL+Q     
Sbjct: 1  MASKRCSLIWVVLILFMLSFSSKALARNI--PDVPKLLEDS-DEMG-PNKRLLFQ----- 51

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNYL 92
               C RGRI   +        + PRCH+Y 
Sbjct: 52 --VPKCRRGRITSEIR------ADKPRCHHYF 75


>Medtr4g036935.1 | RALF related | HC | chr4:13549956-13549344 |
          20130731
          Length = 75

 Score = 62.4 bits (150), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 17/92 (18%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASKRCSLIWVVL L +L FS+KA ARNI      +L   S DE+G  ++RLL+Q     
Sbjct: 1  MASKRCSLIWVVLILFMLSFSSKALARNI--PDVPKLLEDS-DEMG-PNKRLLFQ----- 51

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNYL 92
               C RGRI   +        + PRCH+Y 
Sbjct: 52 --VPKCRRGRITSEIR------ADKPRCHHYF 75


>Medtr4g037655.1 | RALF related | HC | chr4:13870855-13871525 |
          20130731
          Length = 74

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 18/92 (19%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASK+ SLI VVLF+C+L FS+KA ARNI  A AS+ YP S +EI ++ +RLL       
Sbjct: 1  MASKKSSLILVVLFICLLSFSSKALARNI--ANASKPYPFS-EEIDLNKKRLLL------ 51

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNYL 92
               C + RI +  S        DP CH+YL
Sbjct: 52 --AEKCGK-RIQHPDSAA------DPECHHYL 74


>Medtr7g028435.1 | RALF related | HC | chr7:9638357-9638788 |
           20130731
          Length = 105

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 37/117 (31%)

Query: 1   MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
           MASK CSL+ +VLFLC + FS K T RNI   GAS++Y  S DE+G  +R+LL       
Sbjct: 1   MASKNCSLLCMVLFLCTMSFSTK-TTRNI--VGASKMYAIS-DEMG-KNRKLL------- 48

Query: 61  XXXXXCSRGRIAYAVS-------------------PVK---SHA---ENDPRCHNYL 92
                C R RI   ++                   P+K   +H    ENDPRCHNYL
Sbjct: 49  ASDQRCRRERITVELNQASIVLNNTALFNRTDVEQPLKLNQTHEGKPENDPRCHNYL 105


>Medtr4g037005.1 | RALF related | HC | chr4:13598888-13598310 |
           20130731
          Length = 105

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 37/117 (31%)

Query: 1   MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
           MASK CSL+ +VLFLC + FS K T RNI   GAS++Y  S DE+G  +R+LL       
Sbjct: 1   MASKNCSLLCMVLFLCTMSFSTK-TTRNI--VGASKMYAIS-DEMG-KNRKLL------- 48

Query: 61  XXXXXCSRGRIAYAVS-------------------PVK---SHA---ENDPRCHNYL 92
                C R RI   ++                   P+K   +H    ENDPRCHNYL
Sbjct: 49  ASDQRCRRERITVELNQASIVLNNTALFNRTDVEQPLKLNQTHEGKPENDPRCHNYL 105


>Medtr4g037615.1 | RALF related | HC | chr4:13848509-13849134 |
          20130731
          Length = 96

 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 42/53 (79%), Gaps = 3/53 (5%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLL 53
          MASK+CSLI VVLF+C+L FS+KA ARNI    AS+LY  S DEIG++ +RLL
Sbjct: 1  MASKKCSLILVVLFICLLSFSSKALARNI--PNASKLYLFS-DEIGLNKKRLL 50


>Medtr7g028465.1 | RALF related | HC | chr7:9690514-9690107 |
          20130731
          Length = 75

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 16/91 (17%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASK+CSLI+VVL  C+L FS+   ARNI  A ASELY A +DE  ++ R LL Q     
Sbjct: 1  MASKKCSLIFVVLVFCMLSFSSNILARNI--ADASELY-AFSDEKSMNKRLLLQQ----- 52

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNY 91
                   R+    S       ++P CHNY
Sbjct: 53 --------KRLPPCKSRRNQEERDNPGCHNY 75


>Medtr4g036945.1 | RALF related | HC | chr4:13556920-13556343 |
          20130731
          Length = 75

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 16/91 (17%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          MASK+CSLI+VVL  C+L FS+   ARNI  A ASELY A +DE  ++ R LL Q     
Sbjct: 1  MASKKCSLIFVVLVFCMLSFSSNILARNI--ADASELY-AFSDEKSMNKRLLLQQ----- 52

Query: 61 XXXXXCSRGRIAYAVSPVKSHAENDPRCHNY 91
                   R+    S       ++P CHNY
Sbjct: 53 --------KRLPPCKSRRNQEERDNPGCHNY 75


>Medtr4g037005.2 | RALF related | HC | chr4:13599035-13598254 |
           20130731
          Length = 103

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 58/117 (49%), Gaps = 39/117 (33%)

Query: 1   MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
           MASK CSL+ +VLFLC + FS K T RNI   GAS++Y    +E+G  +R+LL       
Sbjct: 1   MASKNCSLLCMVLFLCTMSFSTK-TTRNI--VGASKMYA---NEMG-KNRKLL------- 46

Query: 61  XXXXXCSRGRIAYAVS-------------------PVK---SHA---ENDPRCHNYL 92
                C R RI   ++                   P+K   +H    ENDPRCHNYL
Sbjct: 47  ASDQRCRRERITVELNQASIVLNNTALFNRTDVEQPLKLNQTHEGKPENDPRCHNYL 103


>Medtr4g036990.1 | transmembrane protein, putative | HC |
          chr4:13585568-13584724 | 20130731
          Length = 71

 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 46/95 (48%), Gaps = 27/95 (28%)

Query: 1  MASKRCSLIWVVLFLCVLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXX 60
          M S + S IWVVLFLC+L FS        N  GASE+Y A+  ++    R          
Sbjct: 1  MVSNKFSFIWVVLFLCMLSFS--------NIVGASEMY-ANRKQLNPDQR---------- 41

Query: 61 XXXXXCSRGRIAYAVSPV---KSHAENDPRCHNYL 92
               C RGR+   V+ V   +  A N PRCHNYL
Sbjct: 42 -----CKRGRVTVEVNEVRVPREKAANAPRCHNYL 71