Miyakogusa Predicted Gene

Lj0g3v0311799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311799.1 Non Characterized Hit- tr|I1IBY1|I1IBY1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,34.03,2e-18,seg,NULL,CUFF.21042.1
         (433 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g063210.1 | hypothetical protein | HC | chr3:28604148-2860...   339   3e-93
Medtr5g076140.1 | hypothetical protein | HC | chr5:32425329-3242...   296   2e-80

>Medtr3g063210.1 | hypothetical protein | HC |
           chr3:28604148-28606752 | 20130731
          Length = 681

 Score =  339 bits (870), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 241/456 (52%), Positives = 294/456 (64%), Gaps = 43/456 (9%)

Query: 1   MVSVPATVSSLVMDKSNNGG---GEFATST-GVKRIMVKRNVGGASPRSQSPXXXXXXXX 56
           MVSVPATV+SLVMDKSNN G   GE A  T GVKRI V+RNVG  SPRSQSP        
Sbjct: 246 MVSVPATVTSLVMDKSNNNGCEGGESAAGTIGVKRITVRRNVG--SPRSQSPARANGNAT 303

Query: 57  XXXXXLSENQQHPSLSRNSSKKAEHSPYRRIPLSEVEPNNLAFPHSTANNNSSMVQNRPK 116
                             SS+KAE SPYRR PL+E+E N+LA PHST NNN+S  Q+RPK
Sbjct: 304 SQSSLSRS----------SSRKAEESPYRRNPLNELEQNSLANPHSTVNNNNSRAQSRPK 353

Query: 117 KEIETEANQKPNACRAAMDKGLDVNCKIKVQQEEDVKVQSS-MTDNVVVKTVITSAVDNL 175
           KEIETEAN+ PN+ R A+DK  DV+CK K+ Q+EDVK+ SS   + VV   V+   V+NL
Sbjct: 354 KEIETEANKIPNSSRIALDKVEDVSCKTKL-QDEDVKMMSSVTDNVVVKTVVVPPVVENL 412

Query: 176 KPPILTXXXXXXXXXDLDL--NPEALLNPPPQSYTSLLLEDIHNFHQKNT------PPVS 227
           KP  LT         DL+L  NPE LL  PPQSYTSLLL+DI NFHQKNT      PPVS
Sbjct: 413 KPWRLTRSRSSRRSRDLELDHNPEDLL-IPPQSYTSLLLQDIQNFHQKNTPPPPSPPPVS 471

Query: 228 LPACVTKACAILEAVADLNSNTSSNCS-----RH--GYQSSKSEYNVLFGTTNDHGKRVP 280
           LPACV +AC+I+EAVA+ NSN+SSN S     R+  G+QS+++EY+VL GT+N +GKRV 
Sbjct: 472 LPACVARACSIVEAVANFNSNSSSNLSGVEDRRNPPGFQSNRNEYDVLPGTSNSYGKRV- 530

Query: 281 EPDTKDPLAEYESFVNDDVMEPSLHNYVTVNRDGSLGGVDMEDQESSGSNSFT--QQQHY 338
             D KD   EYE  V DD++EPSLH + T+NR    G  +ME+QESSGSNS T    +H 
Sbjct: 531 -ADNKDRDVEYELIVYDDMVEPSLHKFETMNR----GSSNMEEQESSGSNSLTVSSAKHR 585

Query: 339 IQGIXXXXXXXXXXXXKYLCTSRLNNSREQGQKLPLGLEGRVSREAAR-DVDGARNQLNS 397
                           K   T+RLNN +E+ +K PLG+E RVS  A R ++DGA+ +LNS
Sbjct: 586 RNISSSSSWEPSSSDSKDCWTARLNNCKEEDKKSPLGMERRVSSVARRANIDGAKMKLNS 645

Query: 398 KKNVCDHQHGSRIGRGRVGGNKVLHTRPVVTAAEST 433
           K+   DHQH +  GRGR+G N V H + VVTA  ST
Sbjct: 646 KRRESDHQHDNETGRGRLGANNVPHMKQVVTAVAST 681


>Medtr5g076140.1 | hypothetical protein | HC |
           chr5:32425329-32428370 | 20130731
          Length = 651

 Score =  296 bits (759), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 211/445 (47%), Positives = 240/445 (53%), Gaps = 110/445 (24%)

Query: 1   MVSVPATVSSLVMDKSNNGGGEFATSTGVKRIMVKRNVGGASPRSQSPXXXXXXXXXXXX 60
           MV+VPATV+SLVMDKSNNGGGE     GVKR+ VKRNV  ASPRS SP            
Sbjct: 284 MVTVPATVTSLVMDKSNNGGGE-----GVKRVNVKRNV--ASPRSMSPARGNVNGLNQQR 336

Query: 61  XLS----------ENQQHPSLSRN-SSKKAEHSPYRRIPLSEVEPNNLAFPHSTANNNSS 109
            +S          +NQQ PSLSRN S++K E SPYRR PLSEV+PN+LA+P S ANN  S
Sbjct: 337 SMSPARGNGNVVNQNQQ-PSLSRNNSARKTEVSPYRRNPLSEVDPNSLAYPQSNANNGGS 395

Query: 110 MVQNRPKKEIETEANQKPNA-----------CRAAMDKGLDVNCKIKVQQEEDVKVQSSM 158
            VQN+ KKEIE E  QKP              R  M+KG  VNC  K QQ+E++KV   M
Sbjct: 396 KVQNKGKKEIEVETIQKPTVEMRDNTRNRTNNRVGMEKG--VNCHTKEQQQEEIKV---M 450

Query: 159 TDNVVVKTVITSAVDNLKPPILTXXXXXXXXXDLDL-NPEALLNPPPQSYTSLLLEDIHN 217
           +DN +VK V+        P  +T         D D  NPE L NPP  SYTSLLLEDI N
Sbjct: 451 SDNTIVKNVVM-------PSGITRSRSSRRSRDFDTANPEPLTNPPQTSYTSLLLEDIQN 503

Query: 218 FHQKNT--PPVSLPACVTKACAILEAVADLNSNTSSNCSRHGYQSSKSEYNVLFGTTNDH 275
           FHQKNT  P VSLPAC+ KAC+ILEAVADLNS TSS  SR+       EYN +       
Sbjct: 504 FHQKNTTQPSVSLPACLNKACSILEAVADLNSTTSSTFSRN-------EYNNVA------ 550

Query: 276 GKRVPEPDTKDPLAEYESFVNDDVMEPSLHNYVTVNRDGSLGGVDMEDQESSGSNSFT-- 333
              VPE        E E  V+DDVMEPSLH YVTV R GSL     EDQESSGSNSFT  
Sbjct: 551 ---VPE----SSFVESELVVSDDVMEPSLHKYVTVKRGGSL----CEDQESSGSNSFTVS 599

Query: 334 --QQQHYIQGIXXXXXXXXXXXXKYLCTSRLNNSREQGQKLPLGLEGRVSREAARDVDGA 391
             QQQ  I                   +SRLN+  E                        
Sbjct: 600 SGQQQWNI---------CSSGDSSDCWSSRLNSKEE------------------------ 626

Query: 392 RNQLNSKKNVCDHQHGSRIGRGRVG 416
               + K+  CDHQH   IGRGR+ 
Sbjct: 627 ----SLKRRECDHQHSGGIGRGRLA 647