Miyakogusa Predicted Gene

Lj0g3v0311789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311789.1 Non Characterized Hit- tr|I1LM16|I1LM16_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47776
PE,78.25,0,Multidrug resistance efflux transporter EmrE,NULL;
seg,NULL; EamA,Drug/metabolite transporter,CUFF.21041.1
         (391 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g063250.1 | DMT(drug/metabolite transporter) superfamily p...   480   e-135
Medtr3g063250.2 | DMT(drug/metabolite transporter) superfamily p...   448   e-126
Medtr3g063240.1 | DMT(drug/metabolite transporter) superfamily p...   429   e-120

>Medtr3g063250.1 | DMT(drug/metabolite transporter) superfamily
           permease | HC | chr3:28622861-28619116 | 20130731
          Length = 400

 Score =  480 bits (1235), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/371 (69%), Positives = 280/371 (75%), Gaps = 12/371 (3%)

Query: 25  RRYPLISHTSQFHTNXXXXXXXXXXXXXXXCSNKSTVKASKPPPSGTD---VDCVGTGQN 81
           RRY   SHT QF  +               CSNK+T K+++     TD   VDCVGTGQ+
Sbjct: 22  RRYSFTSHTPQFPYSSRFSITPSYLHFRIPCSNKTTGKSTE----STDLELVDCVGTGQD 77

Query: 82  AECTVNLEQQDGSAKQEDESSPATMLCLAEGLWELAVLVSPFFFWGTAMVAMKEVLPKCG 141
            EC +  E+ +G  K +DESS +  LCL E LWE AVL+SPFFFWGTAMVAMKEV+P  G
Sbjct: 78  VECLLT-EEDEG--KTKDESS-SKRLCLGEALWEGAVLISPFFFWGTAMVAMKEVIPNYG 133

Query: 142 PFFVSAFRLIPAGFLLVGFAASRGRPLPSGFNAWVSISLFALVDATCFQGFLAEGLQKTS 201
           PFFV++FRLIPAGFLLV FAA RGR LPSGFNAW+SI++FALVDA CFQGFLAEGLQKTS
Sbjct: 134 PFFVASFRLIPAGFLLVAFAAFRGRALPSGFNAWLSIAIFALVDAACFQGFLAEGLQKTS 193

Query: 202 AGLGSVIIDSQPLTVAVLAVLLFGESXXXXXXXXXXXXXXXXXXXELPALSFDESNFSLW 261
           AGLGSVIIDSQPLTVAVLA LLFGES                   ELPALSFD SNFSLW
Sbjct: 194 AGLGSVIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGVVGLVLLELPALSFDGSNFSLW 253

Query: 262 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVALAIFNNDPAVSGT 321
           GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVA AI NNDPAVSG+
Sbjct: 254 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVAFAILNNDPAVSGS 313

Query: 322 L-EYSSSDILALLYTSIFGSAVSYGVFFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGE 380
           L EYSS+D+LALLYTSIFGSAVSYGVFFY                 PMFASIFGFLYLGE
Sbjct: 314 LKEYSSTDVLALLYTSIFGSAVSYGVFFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGE 373

Query: 381 TFSPIQLVGAT 391
           TFSP+QLVGA+
Sbjct: 374 TFSPVQLVGAS 384


>Medtr3g063250.2 | DMT(drug/metabolite transporter) superfamily
           permease | HC | chr3:28622855-28619116 | 20130731
          Length = 367

 Score =  448 bits (1152), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/354 (68%), Positives = 261/354 (73%), Gaps = 12/354 (3%)

Query: 25  RRYPLISHTSQFHTNXXXXXXXXXXXXXXXCSNKSTVKASKPPPSGTD---VDCVGTGQN 81
           RRY   SHT QF  +               CSNK+T K+++     TD   VDCVGTGQ+
Sbjct: 22  RRYSFTSHTPQFPYSSRFSITPSYLHFRIPCSNKTTGKSTE----STDLELVDCVGTGQD 77

Query: 82  AECTVNLEQQDGSAKQEDESSPATMLCLAEGLWELAVLVSPFFFWGTAMVAMKEVLPKCG 141
            EC +  E +    K +DESS +  LCL E LWE AVL+SPFFFWGTAMVAMKEV+P  G
Sbjct: 78  VECLLTEEDE---GKTKDESS-SKRLCLGEALWEGAVLISPFFFWGTAMVAMKEVIPNYG 133

Query: 142 PFFVSAFRLIPAGFLLVGFAASRGRPLPSGFNAWVSISLFALVDATCFQGFLAEGLQKTS 201
           PFFV++FRLIPAGFLLV FAA RGR LPSGFNAW+SI++FALVDA CFQGFLAEGLQKTS
Sbjct: 134 PFFVASFRLIPAGFLLVAFAAFRGRALPSGFNAWLSIAIFALVDAACFQGFLAEGLQKTS 193

Query: 202 AGLGSVIIDSQPLTVAVLAVLLFGESXXXXXXXXXXXXXXXXXXXELPALSFDESNFSLW 261
           AGLGSVIIDSQPLTVAVLA LLFGES                   ELPALSFD SNFSLW
Sbjct: 194 AGLGSVIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGVVGLVLLELPALSFDGSNFSLW 253

Query: 262 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVALAIFNNDPAVSGT 321
           GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVA AI NNDPAVSG+
Sbjct: 254 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVAFAILNNDPAVSGS 313

Query: 322 L-EYSSSDILALLYTSIFGSAVSYGVFFYXXXXXXXXXXXXXXXXXPMFASIFG 374
           L EYSS+D+LALLYTSIFGSAVSYGVFFY                 PMFASIFG
Sbjct: 314 LKEYSSTDVLALLYTSIFGSAVSYGVFFYSATKGSLTKLSSLTFLTPMFASIFG 367


>Medtr3g063240.1 | DMT(drug/metabolite transporter) superfamily
           permease | HC | chr3:28618298-28615502 | 20130731
          Length = 327

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/310 (70%), Positives = 246/310 (79%), Gaps = 6/310 (1%)

Query: 83  ECTVNLEQQDGSAKQEDESSPATMLCLAEGLWELAVLVSPFFFWGTAMVAMKEVLPKCGP 142
           EC ++ E+ DG A  +DESSP  +    +GLW+ AVL+SPFFFWGT+MVAMKEV+PK GP
Sbjct: 7   ECLLSAEE-DGKASDKDESSPTIL----DGLWQGAVLISPFFFWGTSMVAMKEVIPKHGP 61

Query: 143 FFVSAFRLIPAGFLLVGFAASRGRPLPSGFNAWVSISLFALVDATCFQGFLAEGLQKTSA 202
           FFVS+FRLIPAGFLLV FAASR R  PS FNAW+SI++FALVDA CFQGFLAEGLQKTSA
Sbjct: 62  FFVSSFRLIPAGFLLVAFAASRRREFPSSFNAWLSIAIFALVDAACFQGFLAEGLQKTSA 121

Query: 203 GLGSVIIDSQPLTVAVLAVLLFGESXXXXXXXXXXXXXXXXXXXELPALSFDESNFSLWG 262
           GLGSVIIDSQPLTVAVLA LLFGES                   ELP+LS D SNFSLWG
Sbjct: 122 GLGSVIIDSQPLTVAVLAALLFGESIGIVGAAGLVLGVIGIVLLELPSLSIDGSNFSLWG 181

Query: 263 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVALAIFNNDPAVSGTL 322
           SGE WMLLAAQSMA+GTVMVRWVSKYSDPIMATGWHM+IGGLPL+ALAI NN+P VSG+L
Sbjct: 182 SGEMWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMIIGGLPLLALAILNNEPVVSGSL 241

Query: 323 -EYSSSDILALLYTSIFGSAVSYGVFFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGET 381
            EYSS+D+LALLY SIFGSAVSYGVFF+                 PMFASIFGFLYLGET
Sbjct: 242 KEYSSTDVLALLYMSIFGSAVSYGVFFHSATKGSLTKLSSLTFLTPMFASIFGFLYLGET 301

Query: 382 FSPIQLVGAT 391
           FSP+Q+VGA+
Sbjct: 302 FSPVQIVGAS 311