Miyakogusa Predicted Gene

Lj0g3v0310909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0310909.1 Non Characterized Hit- tr|I3T002|I3T002_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.07,0,Vac_ImportDeg,Vacuolar import/degradation protein Vid24;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,,CUFF.20975.1
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g020460.1 | glucose-induced degradation-like protein, puta...   407   e-114

>Medtr4g020460.1 | glucose-induced degradation-like protein,
           putative | HC | chr4:6480316-6475433 | 20130731
          Length = 216

 Score =  407 bits (1045), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/216 (89%), Positives = 202/216 (93%), Gaps = 1/216 (0%)

Query: 1   MPVRV-LENVAVSQTVLGPNARRGSFQSCSLLRVGQAFSGTQNVSSLQKDEAWRVNVRIQ 59
           MPVRV LEN+     V G N+RR SFQSC+LL VGQAFSGTQNVSSLQKDEAWRVNVRIQ
Sbjct: 1   MPVRVALENITTPSHVSGANSRRNSFQSCTLLTVGQAFSGTQNVSSLQKDEAWRVNVRIQ 60

Query: 60  GCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDIKNYTFFTGKWEAAPEDDIRHWTKF 119
           GCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVD KNYTFFTGKWEAAPEDDIRHWTKF
Sbjct: 61  GCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEAAPEDDIRHWTKF 120

Query: 120 PSFSPILGQVELDGGKNLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGS 179
            SF P+L QVE+DGGK++DLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSC+DGS
Sbjct: 121 QSFGPLLSQVEVDGGKSVDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCTDGS 180

Query: 180 ISGFYYDPNSSPFQKLELKSTNDGRSGFSFSSYELQ 215
           ISGFYYDPNSSPFQKLELK+TNDGRSGFSFSSYELQ
Sbjct: 181 ISGFYYDPNSSPFQKLELKATNDGRSGFSFSSYELQ 216