Miyakogusa Predicted Gene

Lj0g3v0309049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0309049.1 tr|I0YXA3|I0YXA3_9CHLO Transcriptional
coactivator/pterin dehydratase (Fragment) OS=Coccomyxa
subell,51.06,2e-19,no description,Transcriptional coactivator/pterin
dehydratase; PCD-like,Transcriptional coactivator/,CUFF.20877.1
         (184 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g019990.1 | pterin-4-alpha-carbinolamine dehydratase | HC ...   238   3e-63
Medtr5g019990.2 | pterin-4-alpha-carbinolamine dehydratase | HC ...   187   4e-48
Medtr1g048970.1 | pterin-4-alpha-carbinolamine dehydratase | HC ...    97   1e-20

>Medtr5g019990.1 | pterin-4-alpha-carbinolamine dehydratase | HC |
           chr5:7585366-7588649 | 20130731
          Length = 187

 Score =  238 bits (606), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 123/179 (68%), Positives = 138/179 (77%), Gaps = 11/179 (6%)

Query: 9   PLLHLSAVSNAANKLPLLSFFQPYSYNTRKRMDSQMHKNQ-PGGASSTFCT--MSNKDLS 65
           PLL LS        LP  S F  +S   ++ MDS  H NQ P  + +TF T    + DLS
Sbjct: 17  PLLPLSTT------LPSPSLFSQFS--PKRFMDSNTHHNQIPVSSLTTFSTPNKDSNDLS 68

Query: 66  TKKCVPCNTKDLQPMTEDAAHALIPQVSEWNLVKEGTTLKLRRSWKVKTFTKGLEFFKII 125
           TK CVPCN KDLQPMT+DAA+ALI QVS+WNLV E  TLKL RSWKVK+F KGLEFF+II
Sbjct: 69  TKTCVPCNAKDLQPMTQDAANALIAQVSDWNLVNESGTLKLSRSWKVKSFNKGLEFFRII 128

Query: 126 AEIAEAEGHHPDLHLVGWNNVTIEIWTHSAGGLTENDFILAAKINELNLHDLLRRKASD 184
           A++AEAEGHHPDLHLVGWNNVT+EIWTHS GGLTENDFILAAKINELN+H LLRRKASD
Sbjct: 129 ADLAEAEGHHPDLHLVGWNNVTVEIWTHSVGGLTENDFILAAKINELNVHGLLRRKASD 187


>Medtr5g019990.2 | pterin-4-alpha-carbinolamine dehydratase | HC |
           chr5:7585366-7587289 | 20130731
          Length = 176

 Score =  187 bits (475), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 97/151 (64%), Positives = 111/151 (73%), Gaps = 11/151 (7%)

Query: 9   PLLHLSAVSNAANKLPLLSFFQPYSYNTRKRMDSQMHKNQ-PGGASSTFCT--MSNKDLS 65
           PLL LS        LP  S F  +S   ++ MDS  H NQ P  + +TF T    + DLS
Sbjct: 17  PLLPLSTT------LPSPSLFSQFS--PKRFMDSNTHHNQIPVSSLTTFSTPNKDSNDLS 68

Query: 66  TKKCVPCNTKDLQPMTEDAAHALIPQVSEWNLVKEGTTLKLRRSWKVKTFTKGLEFFKII 125
           TK CVPCN KDLQPMT+DAA+ALI QVS+WNLV E  TLKL RSWKVK+F KGLEFF+II
Sbjct: 69  TKTCVPCNAKDLQPMTQDAANALIAQVSDWNLVNESGTLKLSRSWKVKSFNKGLEFFRII 128

Query: 126 AEIAEAEGHHPDLHLVGWNNVTIEIWTHSAG 156
           A++AEAEGHHPDLHLVGWNNVT+EIWTHS G
Sbjct: 129 ADLAEAEGHHPDLHLVGWNNVTVEIWTHSVG 159


>Medtr1g048970.1 | pterin-4-alpha-carbinolamine dehydratase | HC |
           chr1:18918602-18921746 | 20130731
          Length = 212

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 1/123 (0%)

Query: 59  MSNKDLSTKKCVPCNTKDLQPMTEDAAHALIPQVSEWNLVKEGTTLKLRRSWKVKTFTKG 118
           +S   LS ++C P +     P+++D A+ LI +V  W LV +   LKLR  WK+K F  G
Sbjct: 87  ISALSLSQQECTPISPLQ-NPLSQDDANQLIRKVLGWRLVNDEGILKLRCLWKLKDFKCG 145

Query: 119 LEFFKIIAEIAEAEGHHPDLHLVGWNNVTIEIWTHSAGGLTENDFILAAKINELNLHDLL 178
           +E    I+ + E  GH P++H+   N V  E+WT S GGL+ NDFI+AAKI+ +   DL+
Sbjct: 146 VELINRISTVVETAGHFPNIHIEQPNLVRAELWTTSIGGLSMNDFIVAAKIDAIKTSDLI 205

Query: 179 RRK 181
            RK
Sbjct: 206 PRK 208