Miyakogusa Predicted Gene

Lj0g3v0309009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0309009.1 Non Characterized Hit- tr|I1LCG1|I1LCG1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,60.91,0,seg,NULL,CUFF.20875.1
         (656 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g072850.1 | hypothetical protein | HC | chr1:32360365-3235...   600   e-171

>Medtr1g072850.1 | hypothetical protein | HC |
           chr1:32360365-32355759 | 20130731
          Length = 674

 Score =  600 bits (1548), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 341/649 (52%), Positives = 433/649 (66%), Gaps = 25/649 (3%)

Query: 27  LCKTLFRQLDADLRQFFYAL---HHD------PHPHSRLRPIAQALTLTLRCSLVVLTLP 77
           LC+TLF QL+A   +FF  L   HH+      P P SRL P+ + L+L LR SLVVLTLP
Sbjct: 29  LCETLFNQLNAKFEEFFSHLPLHHHENLSGPLPPPDSRLSPLVEHLSLILRRSLVVLTLP 88

Query: 78  HSDQ----NXXXXXXXXXXXXXXKPVLSVVATTTTLRLLNPFTDAHIHLPESCRPFLCSV 133
            SDQ    N                +  +   TT L L N  +     L +S RPFLC+V
Sbjct: 89  FSDQEFLINKCRFILSILKSLLSADITQLSDGTTVLLLRNFLSHVQFQLSDSYRPFLCTV 148

Query: 134 LEVFADELLRHQSLRRFLMVAD-STSSASEKLFMRRFNCHDDIVCVLEVMCSHFVLS--H 190
           LEVFADELLRHQSLR  LM+AD + SS SEK+F+ R + H DI  VLEV+ +HF+LS  +
Sbjct: 149 LEVFADELLRHQSLRMHLMMADLAASSNSEKMFVCR-STHCDIASVLEVISAHFILSVSN 207

Query: 191 EKGFENFISGLFLHCDNECFRFPELRXXXXXXXXXXXXXHSAPKMFRAHAISLVSDAXXX 250
           EK FENFIS L LHCD + FRFP+L              +SAPK+F+AH ISLV +    
Sbjct: 208 EKAFENFISRLCLHCDKD-FRFPQLGLEPAMALLLDPIVYSAPKIFQAHVISLVYEVIGS 266

Query: 251 XXXXXXXXXXXXCHLIAFQKSVTLYSMHVSSLQIDGFYVKPNCAYDSYLLERSYPSFESY 310
                        +L+AF KSV+LYS+HV+SL +DGFY++PNC YD  L ++ +P+FESY
Sbjct: 267 SLSSENLSQDVGFYLMAFHKSVSLYSIHVASLHMDGFYIEPNCDYDVSLFKKGHPTFESY 326

Query: 311 VQEGTMKRLNQVLSESNNSWESYHCIVSSRAKDEFLAEYIAFVKGRLCLFADSCRDMADS 370
           +QE T  RLNQVLS+SNNS +S  C +SS+ K + LAEYI ++KGR  +FADSCRD A S
Sbjct: 327 IQERTSNRLNQVLSKSNNSLDSSQCKMSSKTKADLLAEYIKYMKGRQYIFADSCRDKATS 386

Query: 371 ILDSIIRRGFSQDA---VVCIKENTSAEDIFLLVSILKLMSVTLLQAVKCLSNDGGDSGC 427
            L  II R FSQDA   V+ +K+NTSAEDI LL SILKLMSV+LL A+KCLSN G  S C
Sbjct: 387 FLHYIIHRTFSQDAAGDVLYVKQNTSAEDISLLASILKLMSVSLLLAIKCLSNSGV-SRC 445

Query: 428 LKTMGSSSLRDQYDFLISVLNDFQQCKFCLPFQTFLCDVMKSQQTDCKVSKSMLVHXXXX 487
           LKTMGSSS+ D+YDFLIS++N FQQ +FCLP QT L D+MK+ Q++ KVSKSMLVH    
Sbjct: 446 LKTMGSSSVCDEYDFLISIINPFQQLQFCLPIQTSLYDMMKNPQSNYKVSKSMLVHFSGL 505

Query: 488 XXXXXXXXXXXXAKGCISVIMALMCLFVFEEGDLVALGSLRVLPLQSCSSEISSDKNGED 547
                       A+GCISV+++LM +F+FEEGDLV LGSLR LPLQSCSSEIS  K+GE 
Sbjct: 506 LSLSFYNGFDVLARGCISVMISLMSMFIFEEGDLVDLGSLRGLPLQSCSSEISFYKSGEG 565

Query: 548 TVDKKSAYKIAAEFHRIQTCNLRTEFNLVEDRTEKTSSGEMFLNCILEDPKKLSDYDELA 607
              K S YKIAAEF+RI+T NLR +  +V D +E+  +GE++L+C L   K + DYDELA
Sbjct: 566 ARKKSSVYKIAAEFNRIRTRNLR-KGCIVADGSEEICNGELYLDCTLS--KNVPDYDELA 622

Query: 608 DFLECEPGKNYASWLKGRAKIRKWRYKKMLNLRKGKKEKIWRSLKRRKI 656
           DF+ C   K+Y+SWL  R   R+ ++ K+   +K KKE +W+SL+ RK+
Sbjct: 623 DFIVCREEKDYSSWLNKRQIYRRQKFHKIRGSKKFKKEGVWKSLRLRKL 671