Miyakogusa Predicted Gene
- Lj0g3v0308509.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0308509.1 Non Characterized Hit- tr|H3DF65|H3DF65_TETNG
Uncharacterized protein (Fragment) OS=Tetraodon
nigrov,52.56,4e-19,P-loop containing nucleoside triphosphate
hydrolases,NULL; no description,NULL; SUBFAMILY NOT
NAMED,,CUFF.20841.1
(111 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC | chr1:147422... 211 2e-55
Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC | chr7:365184... 92 7e-20
Medtr5g013820.2 | regulator of nonsense transcripts protein | HC... 70 6e-13
Medtr5g013820.1 | regulator of nonsense transcripts protein | HC... 70 6e-13
Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-l... 65 1e-11
Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-l... 65 1e-11
Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-l... 65 2e-11
Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase super... 64 2e-11
Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase super... 64 2e-11
Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase super... 64 3e-11
Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase super... 64 4e-11
Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase super... 63 6e-11
Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase super... 62 1e-10
Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase super... 62 1e-10
Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase super... 62 1e-10
Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase super... 61 2e-10
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 59 9e-10
Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase super... 59 1e-09
Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase super... 59 1e-09
Medtr5g006890.1 | RNA helicase SDE3-like protein | HC | chr5:112... 56 9e-09
Medtr5g006890.4 | RNA helicase SDE3-like protein | HC | chr5:112... 56 9e-09
Medtr5g006890.2 | RNA helicase SDE3-like protein | HC | chr5:112... 56 9e-09
Medtr5g006890.3 | RNA helicase SDE3-like protein | HC | chr5:112... 56 9e-09
Medtr2g049990.2 | RNA helicase SDE3-like protein | HC | chr2:229... 55 1e-08
Medtr2g049990.1 | RNA helicase SDE3-like protein | HC | chr2:229... 55 1e-08
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 54 3e-08
Medtr1g038815.1 | P-loop nucleoside triphosphate hydrolase super... 52 1e-07
Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | ... 51 2e-07
>Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC |
chr1:14742280-14736383 | 20130731
Length = 914
Score = 211 bits (536), Expect = 2e-55, Method: Composition-based stats.
Identities = 98/112 (87%), Positives = 106/112 (94%), Gaps = 1/112 (0%)
Query: 1 MLDEFPEAAGTEVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHL 60
MLD PEAAGTEVSTIDSFQGREAD VILSMVRSNTLGAVGFLGDSRRINVA+TRARKHL
Sbjct: 803 MLDGVPEAAGTEVSTIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHL 862
Query: 61 AVVCDSSTICHNTFLARLMRHIRRFGRIKHVEPGNF-GGYGLGMNPILPSIN 111
A+VCDSSTICHNTFLARLMRHIR FGR+KHVEP +F GG+GLGMNP+LPS++
Sbjct: 863 AIVCDSSTICHNTFLARLMRHIRHFGRVKHVEPDSFGGGFGLGMNPMLPSMD 914
>Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC |
chr7:36518499-36511162 | 20130731
Length = 645
Score = 92.4 bits (228), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 12 EVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICH 71
E+ST+D FQGRE + +I+SMVRSN+ VGFL D RR+NVAVTRAR+ +VCD+ T+
Sbjct: 560 EISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCIVCDTETVSS 619
Query: 72 NTFLARLMRHIRRFG 86
+ FL RL+ + G
Sbjct: 620 DGFLKRLIEYFEEHG 634
>Medtr5g013820.2 | regulator of nonsense transcripts protein | HC |
chr5:4548258-4534982 | 20130731
Length = 1275
Score = 69.7 bits (169), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 12 EVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICH 71
EV+++DSFQGRE D +ILS VRSN +GFL D RR+NVA+TRAR + ++ + +
Sbjct: 830 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 889
Query: 72 NTFLARLMRHIR 83
L+ H +
Sbjct: 890 QPLWNGLLTHYK 901
>Medtr5g013820.1 | regulator of nonsense transcripts protein | HC |
chr5:4548278-4534982 | 20130731
Length = 1253
Score = 69.7 bits (169), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 12 EVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICH 71
EV+++DSFQGRE D +ILS VRSN +GFL D RR+NVA+TRAR + ++ + +
Sbjct: 830 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 889
Query: 72 NTFLARLMRHIR 83
L+ H +
Sbjct: 890 QPLWNGLLTHYK 901
>Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 1156
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 4 EFPEAAGTE------VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRAR 57
EF E +E ++T+D+FQG+E DV+I+S VR++T G VGF+ D RR+NVA+TRAR
Sbjct: 957 EFEEVLNSEEGKDIYINTVDAFQGQERDVIIMSCVRASTHG-VGFVADIRRMNVALTRAR 1015
Query: 58 KHLAVVCDSSTICHNTFLARLMRHIR 83
+ L V+ +++ + + A L+ R
Sbjct: 1016 RALWVMGNANALIQSEDWAALIADAR 1041
>Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139957-7131293 | 20130731
Length = 1373
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 4 EFPEAAGTE------VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRAR 57
EF E +E ++T+D+FQG+E DV+I+S VR++T G VGF+ D RR+NVA+TRAR
Sbjct: 1174 EFEEVLNSEEGKDIYINTVDAFQGQERDVIIMSCVRASTHG-VGFVADIRRMNVALTRAR 1232
Query: 58 KHLAVVCDSSTICHNTFLARLMRHIR 83
+ L V+ +++ + + A L+ R
Sbjct: 1233 RALWVMGNANALIQSEDWAALIADAR 1258
>Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 868
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 4 EFPEAAGTE------VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRAR 57
EF E +E ++T+D+FQG+E DV+I+S VR++T G VGF+ D RR+NVA+TRAR
Sbjct: 669 EFEEVLNSEEGKDIYINTVDAFQGQERDVIIMSCVRASTHG-VGFVADIRRMNVALTRAR 727
Query: 58 KHLAVVCDSSTICHNTFLARLMRHIR 83
+ L V+ +++ + + A L+ R
Sbjct: 728 RALWVMGNANALIQSEDWAALIADAR 753
>Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32541203-32546485 |
20130731
Length = 898
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 13 VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICHN 72
V ++D FQG E D++I+S VRSN G VGFL + +R NVA+TRAR L +V +++T+ ++
Sbjct: 750 VRSVDGFQGGEEDIIIISTVRSNLSGKVGFLSNRQRANVAITRARYCLWIVGNATTLVNS 809
Query: 73 TFLAR 77
+ R
Sbjct: 810 NSVWR 814
>Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32566132-32571914 |
20130731
Length = 885
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 13 VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICHN 72
V ++D FQG E D++I+S VRSN G VGFL + +R+NVA+TRAR L ++ +++T+ ++
Sbjct: 754 VRSVDGFQGGEEDIIIISTVRSNESGKVGFLSNRQRVNVAITRARYCLWILGNAATLINS 813
Query: 73 TFLAR 77
+ R
Sbjct: 814 DSVWR 818
>Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28870689-28861592 |
20130731
Length = 1113
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 12 EVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTI 69
+VST+D FQG E DV+I+S VR N++G VGF+ + +R NV++TRAR L ++ + T+
Sbjct: 833 KVSTVDGFQGGEEDVIIISTVRHNSMGVVGFISNIQRTNVSLTRARYCLWIIGNGETL 890
>Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32616775-32612603 |
20130731
Length = 917
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 13 VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICHN 72
V +ID FQG E D++I+S VRSN G VGFL + +R NVA+TRAR L ++ ++ST+ ++
Sbjct: 765 VRSIDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWILGNASTLANS 824
Query: 73 TFLAR 77
+ R
Sbjct: 825 DSIWR 829
>Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32517067-32511573 |
20130731
Length = 897
Score = 62.8 bits (151), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 13 VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICHN 72
V ++D FQG E D++I+S VRSN G VGFL + +R NVA+TRAR L +V +++T+ ++
Sbjct: 775 VRSVDGFQGGEEDLIIISTVRSNFGGKVGFLSNRQRTNVAITRARYCLWIVGNATTLINS 834
Query: 73 TFLAR 77
+ R
Sbjct: 835 NSVWR 839
>Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 12 EVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTI 69
++ T+D QGRE DV I S VR++ G +GFL D RR+NV +TRA+ + VV +ST+
Sbjct: 672 DICTVDGCQGREKDVAIFSCVRASKEGGIGFLDDIRRMNVGITRAKSAVLVVGSASTL 729
>Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 12 EVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTI 69
++ T+D QGRE DV I S VR++ G +GFL D RR+NV +TRA+ + VV +ST+
Sbjct: 672 DICTVDGCQGREKDVAIFSCVRASKEGGIGFLDDIRRMNVGITRAKSAVLVVGSASTL 729
>Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:21642650-21636231 |
20130731
Length = 336
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 12 EVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTI 69
++ T+D QGRE DV I S VR++ G +GF+ D RR+NV +TRA+ + VV +ST+
Sbjct: 226 DICTVDGCQGREKDVAIFSCVRASKEGGIGFVDDKRRMNVGITRAKSAVLVVGSASTL 283
>Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32527815-32524102 |
20130731
Length = 860
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 13 VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICHN 72
V ++D FQG E D++I+S VRSN G VGFL + +R NVA+TRAR L ++ +++T+ ++
Sbjct: 732 VRSVDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWILGNAATLINS 791
Query: 73 TFLAR 77
+ R
Sbjct: 792 DSVWR 796
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 43/63 (68%)
Query: 7 EAAGTEVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDS 66
E +V TID FQG E D++ILS VR++ ++GF+ +++R NVA+TRAR L ++ +
Sbjct: 739 EGFSVKVKTIDGFQGGEQDIIILSTVRTDCSTSLGFISNNQRTNVALTRARHCLWILGNE 798
Query: 67 STI 69
T+
Sbjct: 799 RTL 801
>Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr2:45654495-45634088 |
20130731
Length = 2328
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Query: 9 AGTEVSTIDSFQGREADVVILSMVRSNTLG---------AVGFLGDSRRINVAVTRARKH 59
A E +T+D FQGRE D+++LS VR+ G ++GF+ D RR+NVA+TRA+
Sbjct: 1981 ADIEFNTVDGFQGREVDILLLSTVRAGHSGTAASEINSSSIGFVADIRRMNVALTRAKLS 2040
Query: 60 LAVVCDSSTICHNTFLARLMR 80
L ++ ++ T+ N A L++
Sbjct: 2041 LWILGNARTLQTNHNWAALVK 2061
>Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28858780-28854927 |
20130731
Length = 906
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 13 VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTI 69
V ++D FQG E D++I+S VRSN +GFL + +R NVA+TRAR L ++ + +T+
Sbjct: 755 VRSVDGFQGGEEDIIIISTVRSNEDAKIGFLSNRQRANVALTRARHCLWILGNETTL 811
>Medtr5g006890.1 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 7 EAAGTEVSTIDSFQGREADVVILSMVRS-------NTLGAVGFLGDSRRINVAVTRARKH 59
E +V +++ FQG+E +V+I+S VRS + + +GFL + RR NVA+TRA
Sbjct: 728 EMPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRAISL 787
Query: 60 LAVVCDSSTICHNTFLARLMRHIRRFG---------RIKHVEP--GNFGGYGLGMNPILP 108
L ++ + IC + ++++ H RI+H + G G+G P
Sbjct: 788 LVIIGNPHIICKDDHWSQMLWHCVDHSSYLGCSLPERIEHYDEGVGENSGFGYDEGNTWP 847
Query: 109 SIN 111
S N
Sbjct: 848 SNN 850
>Medtr5g006890.4 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 7 EAAGTEVSTIDSFQGREADVVILSMVRS-------NTLGAVGFLGDSRRINVAVTRARKH 59
E +V +++ FQG+E +V+I+S VRS + + +GFL + RR NVA+TRA
Sbjct: 469 EMPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRAISL 528
Query: 60 LAVVCDSSTICHNTFLARLMRHIRRFG---------RIKHVEP--GNFGGYGLGMNPILP 108
L ++ + IC + ++++ H RI+H + G G+G P
Sbjct: 529 LVIIGNPHIICKDDHWSQMLWHCVDHSSYLGCSLPERIEHYDEGVGENSGFGYDEGNTWP 588
Query: 109 SIN 111
S N
Sbjct: 589 SNN 591
>Medtr5g006890.2 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 7 EAAGTEVSTIDSFQGREADVVILSMVRS-------NTLGAVGFLGDSRRINVAVTRARKH 59
E +V +++ FQG+E +V+I+S VRS + + +GFL + RR NVA+TRA
Sbjct: 728 EMPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRAISL 787
Query: 60 LAVVCDSSTICHNTFLARLMRHIRRFG---------RIKHVEP--GNFGGYGLGMNPILP 108
L ++ + IC + ++++ H RI+H + G G+G P
Sbjct: 788 LVIIGNPHIICKDDHWSQMLWHCVDHSSYLGCSLPERIEHYDEGVGENSGFGYDEGNTWP 847
Query: 109 SIN 111
S N
Sbjct: 848 SNN 850
>Medtr5g006890.3 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 7 EAAGTEVSTIDSFQGREADVVILSMVRS-------NTLGAVGFLGDSRRINVAVTRARKH 59
E +V +++ FQG+E +V+I+S VRS + + +GFL + RR NVA+TRA
Sbjct: 469 EMPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRAISL 528
Query: 60 LAVVCDSSTICHNTFLARLMRHIRRFG---------RIKHVEP--GNFGGYGLGMNPILP 108
L ++ + IC + ++++ H RI+H + G G+G P
Sbjct: 529 LVIIGNPHIICKDDHWSQMLWHCVDHSSYLGCSLPERIEHYDEGVGENSGFGYDEGNTWP 588
Query: 109 SIN 111
S N
Sbjct: 589 SNN 591
>Medtr2g049990.2 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 681
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 7 EAAGTEVSTIDSFQGREADVVILSMVRS-------NTLGAVGFLGDSRRINVAVTRARKH 59
E +V +++ FQG+E +V+I+S VRS + + +GFL + RR NVA+TRA
Sbjct: 469 EMPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRAISL 528
Query: 60 LAVVCDSSTICHNTFLARLMRH 81
L ++ + IC + ++++ H
Sbjct: 529 LVIIGNPHIICKDDHWSQMLWH 550
>Medtr2g049990.1 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 940
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 7 EAAGTEVSTIDSFQGREADVVILSMVRS-------NTLGAVGFLGDSRRINVAVTRARKH 59
E +V +++ FQG+E +V+I+S VRS + + +GFL + RR NVA+TRA
Sbjct: 728 EMPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRAISL 787
Query: 60 LAVVCDSSTICHNTFLARLMRH 81
L ++ + IC + ++++ H
Sbjct: 788 LVIIGNPHIICKDDHWSQMLWH 809
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 13 VSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSSTICHN 72
V +ID FQG E D++ILS VR+N ++ F+ +R NVA+TRAR L ++ + + +N
Sbjct: 766 VKSIDGFQGGEQDIIILSTVRTNYRTSLQFISSPQRTNVALTRARYCLWILGNERALVNN 825
Query: 73 TFLARLM 79
+ R +
Sbjct: 826 NNVWRAL 832
>Medtr1g038815.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:14386619-14375144 |
20130731
Length = 1545
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 8 AAGTEVSTIDSFQGREADVVILSMVRSNTLGAVGFLGDSRRINVAVTRARKHLAVVCDSS 67
A ++V+T+D FQG++ D ++LS+VR+ VG L D RR+ VA++RAR L V C S
Sbjct: 1323 GAPSKVATVDKFQGQQNDFILLSLVRTRF---VGHLRDVRRLVVAMSRARLGLYVFCRRS 1379
>Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | HC |
chr7:13072986-13090873 | 20130731
Length = 1335
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 12 EVSTIDSFQGREADVVILSMVRS---NTLGAVGFLGDSRRINVAVTRARKHLAVV 63
E+ TID +QGR+ D +++S VRS T LGD RINVA+TRA++ L +V
Sbjct: 1225 EIHTIDKYQGRDKDCILVSFVRSCENPTSCVASLLGDWHRINVALTRAKRKLIMV 1279