Miyakogusa Predicted Gene

Lj0g3v0308429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0308429.1 Non Characterized Hit- tr|I1MVD2|I1MVD2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52634 PE,72.97,2e-16,
,CUFF.20822.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g098710.1 | hypothetical protein | HC | chr4:40700683-4069...    87   3e-18

>Medtr4g098710.1 | hypothetical protein | HC |
          chr4:40700683-40698147 | 20130731
          Length = 81

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 2/68 (2%)

Query: 15 TRESLIAISSSYSPDKNLESNSVSENKKSDGVAKPKCNQDDDFRSELISISYAESPDVKV 74
           RESLIAIS++ SPDK L SNS SE KKSDG   P C+QD+ FRSELISISYAESPDVK+
Sbjct: 16 ARESLIAISNT-SPDKILNSNSASEGKKSDGAVLPNCDQDEQFRSELISISYAESPDVKI 74

Query: 75 SSPISMDV 82
           S I+M V
Sbjct: 75 GS-IAMGV 81