Miyakogusa Predicted Gene

Lj0g3v0308169.2
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0308169.2 Non Characterized Hit- tr|I1NB46|I1NB46_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,34.36,2e-18,DUF3493,Protein of unknown function DUF3493;
seg,NULL,CUFF.20797.2
         (334 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069240.1 | plant/F16A16-150 protein, putative | HC | chr1...   453   e-127
Medtr7g108590.1 | TPR repeat protein | HC | chr7:44238334-442423...   144   1e-34
Medtr7g108590.2 | TPR repeat protein | HC | chr7:44238334-442423...   100   2e-21
Medtr7g108590.3 | TPR repeat protein | HC | chr7:44238334-442423...   100   2e-21

>Medtr1g069240.1 | plant/F16A16-150 protein, putative | HC |
           chr1:29822607-29820040 | 20130731
          Length = 333

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/341 (72%), Positives = 272/341 (79%), Gaps = 15/341 (4%)

Query: 1   MALA-FGSVTPNSNNTFYLTLTLPKSPPRNLINNHR-NFFSGNKGVSYGHN--LFYTDPR 56
           MALA FGS + NSN  F   LTLP +PP   I+NHR NF   +  +SYGH   L+Y+   
Sbjct: 1   MALATFGSTSANSNTLF---LTLP-TPPPCFIHNHRTNFMFSSSRLSYGHTHTLYYSH-- 54

Query: 57  TRRASLATILCXXXXXXXXXXXXXXXXXXXXXEVLSPFRSLRMFFYVAFIASASLGAFIA 116
            +R+S+ TI+C                     EVLSPFR++RMFFY AF+ASASLG  IA
Sbjct: 55  -QRSSVPTIVCSASNKPSTSPQISSTARIRS-EVLSPFRAVRMFFYTAFVASASLGTLIA 112

Query: 117 ATQLIGALANSSRASQVPEILKGLGIDIGAVSIFAFLYFRDNKAKNAQEARLSREEFLSN 176
            +QLIGAL+N SRAS+V EILKGLGIDIGAVS+F FLY+RDNKAKNAQEARLSREE LSN
Sbjct: 113 ISQLIGALSNPSRASEVSEILKGLGIDIGAVSLFGFLYYRDNKAKNAQEARLSREEILSN 172

Query: 177 LKLRVDEKKIIPVSSLRGIARLVICAGPESFITESFKRSEPFTEGLMDRGVLVVPFVTDG 236
           LKLRV EK+IIPV+SLRGIARLVICAGP SFITESFKRSEPFTE L+DRGVLVVP VTDG
Sbjct: 173 LKLRVSEKRIIPVNSLRGIARLVICAGPASFITESFKRSEPFTENLLDRGVLVVPLVTDG 232

Query: 237 NSPDLEFEETEEM---KQLATRRKRLWQLTPVYITEWSNWLDEQKKLAGVSSESPVYLSL 293
           NSP LEFEETEE    KQLATRRKRLWQL PV  +EWS WLDEQKK+AGVSS+SPVYLSL
Sbjct: 233 NSPALEFEETEETDEAKQLATRRKRLWQLAPVITSEWSEWLDEQKKMAGVSSDSPVYLSL 292

Query: 294 RLDGRVRGSGVGYPPWNAFVAQLPPVKGMWTGLLDGFDGRV 334
           RLDGRVRGSGVGYPPWNAFVAQLPPVKG+WTGLLDG DGRV
Sbjct: 293 RLDGRVRGSGVGYPPWNAFVAQLPPVKGIWTGLLDGMDGRV 333


>Medtr7g108590.1 | TPR repeat protein | HC | chr7:44238334-44242357
           | 20130731
          Length = 446

 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 23/261 (8%)

Query: 89  EVLSPFRSLRMFFYVAFIASASLGAFIAATQLIGALANSSRASQVPEILKGLGIDIGAVS 148
           EV +PFR +R FFYVAF A+A +  F    +++ A+     A  V E      ++IG + 
Sbjct: 184 EVQAPFRGIRRFFYVAFTAAAGISLFFNVPRILRAIQGGDGAPDVLETAGNAAVNIGGIV 243

Query: 149 IFAFLYFRDNKAKNAQEARLSREEFLSNLKLRVDEKKIIPVSSLRGIARLVICAGPESFI 208
           +F  L+  DNK +  Q A++SR E LS L LR+   +++ +  LR   R VI AG +  +
Sbjct: 244 VFVALFLWDNKKEEEQIAQISRNETLSRLPLRLSTNRVVELVQLRDTVRPVIIAGKKETV 303

Query: 209 TESFKRSEPFTEGLMDRGVLVVPFV-TDGNSPDLEF-----------------EETEEMK 250
           T + +++E F   L+ RGVL+VP +  +G    +E                  E+ E+  
Sbjct: 304 TLALRKAERFRTDLLRRGVLLVPVIWGEGRETKIEKKGFGLQPKAAEALPSIGEDFEKRT 363

Query: 251 QLATRRKRL-----WQLTPVYITEWSNWLDEQKKLAGVSSESPVYLSLRLDGRVRGSGVG 305
           Q  T + +L     ++   V   EW  W+ +Q+K  GV     VY+ LRLDGRVR SG G
Sbjct: 364 QSVTAQSKLKAEVRFKAEAVSPAEWEWWIRDQQKSEGVPVGEDVYIILRLDGRVRRSGRG 423

Query: 306 YPPWNAFVAQLPPVKGMWTGL 326
            P W+    +LPP++ + + L
Sbjct: 424 IPDWDQIAKELPPMEAILSKL 444


>Medtr7g108590.2 | TPR repeat protein | HC | chr7:44238334-44242350
           | 20130731
          Length = 364

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 83/145 (57%)

Query: 89  EVLSPFRSLRMFFYVAFIASASLGAFIAATQLIGALANSSRASQVPEILKGLGIDIGAVS 148
           EV +PFR +R FFYVAF A+A +  F    +++ A+     A  V E      ++IG + 
Sbjct: 184 EVQAPFRGIRRFFYVAFTAAAGISLFFNVPRILRAIQGGDGAPDVLETAGNAAVNIGGIV 243

Query: 149 IFAFLYFRDNKAKNAQEARLSREEFLSNLKLRVDEKKIIPVSSLRGIARLVICAGPESFI 208
           +F  L+  DNK +  Q A++SR E LS L LR+   +++ +  LR   R VI AG +  +
Sbjct: 244 VFVALFLWDNKKEEEQIAQISRNETLSRLPLRLSTNRVVELVQLRDTVRPVIIAGKKETV 303

Query: 209 TESFKRSEPFTEGLMDRGVLVVPFV 233
           T + +++E F   L+ RGVL+VP +
Sbjct: 304 TLALRKAERFRTDLLRRGVLLVPVI 328


>Medtr7g108590.3 | TPR repeat protein | HC | chr7:44238334-44242339
           | 20130731
          Length = 389

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 83/145 (57%)

Query: 89  EVLSPFRSLRMFFYVAFIASASLGAFIAATQLIGALANSSRASQVPEILKGLGIDIGAVS 148
           EV +PFR +R FFYVAF A+A +  F    +++ A+     A  V E      ++IG + 
Sbjct: 184 EVQAPFRGIRRFFYVAFTAAAGISLFFNVPRILRAIQGGDGAPDVLETAGNAAVNIGGIV 243

Query: 149 IFAFLYFRDNKAKNAQEARLSREEFLSNLKLRVDEKKIIPVSSLRGIARLVICAGPESFI 208
           +F  L+  DNK +  Q A++SR E LS L LR+   +++ +  LR   R VI AG +  +
Sbjct: 244 VFVALFLWDNKKEEEQIAQISRNETLSRLPLRLSTNRVVELVQLRDTVRPVIIAGKKETV 303

Query: 209 TESFKRSEPFTEGLMDRGVLVVPFV 233
           T + +++E F   L+ RGVL+VP +
Sbjct: 304 TLALRKAERFRTDLLRRGVLLVPVI 328