Miyakogusa Predicted Gene
- Lj0g3v0308169.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0308169.2 Non Characterized Hit- tr|I1NB46|I1NB46_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,34.36,2e-18,DUF3493,Protein of unknown function DUF3493;
seg,NULL,CUFF.20797.2
(334 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g069240.1 | plant/F16A16-150 protein, putative | HC | chr1... 453 e-127
Medtr7g108590.1 | TPR repeat protein | HC | chr7:44238334-442423... 144 1e-34
Medtr7g108590.2 | TPR repeat protein | HC | chr7:44238334-442423... 100 2e-21
Medtr7g108590.3 | TPR repeat protein | HC | chr7:44238334-442423... 100 2e-21
>Medtr1g069240.1 | plant/F16A16-150 protein, putative | HC |
chr1:29822607-29820040 | 20130731
Length = 333
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/341 (72%), Positives = 272/341 (79%), Gaps = 15/341 (4%)
Query: 1 MALA-FGSVTPNSNNTFYLTLTLPKSPPRNLINNHR-NFFSGNKGVSYGHN--LFYTDPR 56
MALA FGS + NSN F LTLP +PP I+NHR NF + +SYGH L+Y+
Sbjct: 1 MALATFGSTSANSNTLF---LTLP-TPPPCFIHNHRTNFMFSSSRLSYGHTHTLYYSH-- 54
Query: 57 TRRASLATILCXXXXXXXXXXXXXXXXXXXXXEVLSPFRSLRMFFYVAFIASASLGAFIA 116
+R+S+ TI+C EVLSPFR++RMFFY AF+ASASLG IA
Sbjct: 55 -QRSSVPTIVCSASNKPSTSPQISSTARIRS-EVLSPFRAVRMFFYTAFVASASLGTLIA 112
Query: 117 ATQLIGALANSSRASQVPEILKGLGIDIGAVSIFAFLYFRDNKAKNAQEARLSREEFLSN 176
+QLIGAL+N SRAS+V EILKGLGIDIGAVS+F FLY+RDNKAKNAQEARLSREE LSN
Sbjct: 113 ISQLIGALSNPSRASEVSEILKGLGIDIGAVSLFGFLYYRDNKAKNAQEARLSREEILSN 172
Query: 177 LKLRVDEKKIIPVSSLRGIARLVICAGPESFITESFKRSEPFTEGLMDRGVLVVPFVTDG 236
LKLRV EK+IIPV+SLRGIARLVICAGP SFITESFKRSEPFTE L+DRGVLVVP VTDG
Sbjct: 173 LKLRVSEKRIIPVNSLRGIARLVICAGPASFITESFKRSEPFTENLLDRGVLVVPLVTDG 232
Query: 237 NSPDLEFEETEEM---KQLATRRKRLWQLTPVYITEWSNWLDEQKKLAGVSSESPVYLSL 293
NSP LEFEETEE KQLATRRKRLWQL PV +EWS WLDEQKK+AGVSS+SPVYLSL
Sbjct: 233 NSPALEFEETEETDEAKQLATRRKRLWQLAPVITSEWSEWLDEQKKMAGVSSDSPVYLSL 292
Query: 294 RLDGRVRGSGVGYPPWNAFVAQLPPVKGMWTGLLDGFDGRV 334
RLDGRVRGSGVGYPPWNAFVAQLPPVKG+WTGLLDG DGRV
Sbjct: 293 RLDGRVRGSGVGYPPWNAFVAQLPPVKGIWTGLLDGMDGRV 333
>Medtr7g108590.1 | TPR repeat protein | HC | chr7:44238334-44242357
| 20130731
Length = 446
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 23/261 (8%)
Query: 89 EVLSPFRSLRMFFYVAFIASASLGAFIAATQLIGALANSSRASQVPEILKGLGIDIGAVS 148
EV +PFR +R FFYVAF A+A + F +++ A+ A V E ++IG +
Sbjct: 184 EVQAPFRGIRRFFYVAFTAAAGISLFFNVPRILRAIQGGDGAPDVLETAGNAAVNIGGIV 243
Query: 149 IFAFLYFRDNKAKNAQEARLSREEFLSNLKLRVDEKKIIPVSSLRGIARLVICAGPESFI 208
+F L+ DNK + Q A++SR E LS L LR+ +++ + LR R VI AG + +
Sbjct: 244 VFVALFLWDNKKEEEQIAQISRNETLSRLPLRLSTNRVVELVQLRDTVRPVIIAGKKETV 303
Query: 209 TESFKRSEPFTEGLMDRGVLVVPFV-TDGNSPDLEF-----------------EETEEMK 250
T + +++E F L+ RGVL+VP + +G +E E+ E+
Sbjct: 304 TLALRKAERFRTDLLRRGVLLVPVIWGEGRETKIEKKGFGLQPKAAEALPSIGEDFEKRT 363
Query: 251 QLATRRKRL-----WQLTPVYITEWSNWLDEQKKLAGVSSESPVYLSLRLDGRVRGSGVG 305
Q T + +L ++ V EW W+ +Q+K GV VY+ LRLDGRVR SG G
Sbjct: 364 QSVTAQSKLKAEVRFKAEAVSPAEWEWWIRDQQKSEGVPVGEDVYIILRLDGRVRRSGRG 423
Query: 306 YPPWNAFVAQLPPVKGMWTGL 326
P W+ +LPP++ + + L
Sbjct: 424 IPDWDQIAKELPPMEAILSKL 444
>Medtr7g108590.2 | TPR repeat protein | HC | chr7:44238334-44242350
| 20130731
Length = 364
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%)
Query: 89 EVLSPFRSLRMFFYVAFIASASLGAFIAATQLIGALANSSRASQVPEILKGLGIDIGAVS 148
EV +PFR +R FFYVAF A+A + F +++ A+ A V E ++IG +
Sbjct: 184 EVQAPFRGIRRFFYVAFTAAAGISLFFNVPRILRAIQGGDGAPDVLETAGNAAVNIGGIV 243
Query: 149 IFAFLYFRDNKAKNAQEARLSREEFLSNLKLRVDEKKIIPVSSLRGIARLVICAGPESFI 208
+F L+ DNK + Q A++SR E LS L LR+ +++ + LR R VI AG + +
Sbjct: 244 VFVALFLWDNKKEEEQIAQISRNETLSRLPLRLSTNRVVELVQLRDTVRPVIIAGKKETV 303
Query: 209 TESFKRSEPFTEGLMDRGVLVVPFV 233
T + +++E F L+ RGVL+VP +
Sbjct: 304 TLALRKAERFRTDLLRRGVLLVPVI 328
>Medtr7g108590.3 | TPR repeat protein | HC | chr7:44238334-44242339
| 20130731
Length = 389
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%)
Query: 89 EVLSPFRSLRMFFYVAFIASASLGAFIAATQLIGALANSSRASQVPEILKGLGIDIGAVS 148
EV +PFR +R FFYVAF A+A + F +++ A+ A V E ++IG +
Sbjct: 184 EVQAPFRGIRRFFYVAFTAAAGISLFFNVPRILRAIQGGDGAPDVLETAGNAAVNIGGIV 243
Query: 149 IFAFLYFRDNKAKNAQEARLSREEFLSNLKLRVDEKKIIPVSSLRGIARLVICAGPESFI 208
+F L+ DNK + Q A++SR E LS L LR+ +++ + LR R VI AG + +
Sbjct: 244 VFVALFLWDNKKEEEQIAQISRNETLSRLPLRLSTNRVVELVQLRDTVRPVIIAGKKETV 303
Query: 209 TESFKRSEPFTEGLMDRGVLVVPFV 233
T + +++E F L+ RGVL+VP +
Sbjct: 304 TLALRKAERFRTDLLRRGVLLVPVI 328