Miyakogusa Predicted Gene

Lj0g3v0307519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307519.1 Non Characterized Hit- tr|K4ALI6|K4ALI6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si039767,51.76,1e-18,DUF2348,Uncharacterised protein family
UPF0405; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.20747.1
         (89 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g451710.1 | paxneb protein | HC | chr7:17603010-17596561 |...   163   3e-41
Medtr7g451610.1 | elongator complex-like protein | HC | chr7:174...   159   7e-40
Medtr7g047440.1 | elongator complex-like protein | HC | chr7:166...   158   1e-39

>Medtr7g451710.1 | paxneb protein | HC | chr7:17603010-17596561 |
           20130731
          Length = 317

 Score =  163 bits (413), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 76/89 (85%), Positives = 82/89 (92%)

Query: 1   MKFASTMIDDICFLEFAANGSSNDVLDFLHYCQTLTSEYGCTFIALDHKDIYLNGERPAI 60
           MKFA+ MIDDI FL+ AANGSSNDVLDFLHYC TLTSEYGC FIALDHKDIYLN E+PAI
Sbjct: 192 MKFATIMIDDISFLQVAANGSSNDVLDFLHYCYTLTSEYGCAFIALDHKDIYLNEEKPAI 251

Query: 61  ILEIEYLADILVKAEPLATGLAKDMHWQI 89
           ILE+EYLADILVKAEPLATGLAKD+H Q+
Sbjct: 252 ILEMEYLADILVKAEPLATGLAKDVHGQL 280


>Medtr7g451610.1 | elongator complex-like protein | HC |
           chr7:17454123-17456653 | 20130731
          Length = 180

 Score =  159 bits (401), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 76/89 (85%), Positives = 82/89 (92%)

Query: 1   MKFASTMIDDICFLEFAANGSSNDVLDFLHYCQTLTSEYGCTFIALDHKDIYLNGERPAI 60
           MKFA+ MIDDI FL+ AANGSSNDVLDFLHYC TLTSEYGC FIALDHKDIYLN E+PAI
Sbjct: 55  MKFATIMIDDISFLQVAANGSSNDVLDFLHYCYTLTSEYGCAFIALDHKDIYLNEEKPAI 114

Query: 61  ILEIEYLADILVKAEPLATGLAKDMHWQI 89
           ILE+EYLADILVKAEPLATGLAKD+H Q+
Sbjct: 115 ILEMEYLADILVKAEPLATGLAKDVHGQL 143


>Medtr7g047440.1 | elongator complex-like protein | HC |
           chr7:16642667-16638805 | 20130731
          Length = 320

 Score =  158 bits (399), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 76/89 (85%), Positives = 82/89 (92%)

Query: 1   MKFASTMIDDICFLEFAANGSSNDVLDFLHYCQTLTSEYGCTFIALDHKDIYLNGERPAI 60
           MKFA+ MIDDI FL+ AANGSSNDVLDFLHYC TLTSEYGC FIALDHKDIYLN E+PAI
Sbjct: 195 MKFATIMIDDISFLQVAANGSSNDVLDFLHYCYTLTSEYGCAFIALDHKDIYLNEEKPAI 254

Query: 61  ILEIEYLADILVKAEPLATGLAKDMHWQI 89
           ILE+EYLADILVKAEPLATGLAKD+H Q+
Sbjct: 255 ILEMEYLADILVKAEPLATGLAKDVHGQL 283