Miyakogusa Predicted Gene

Lj0g3v0307349.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307349.1 Non Characterized Hit- tr|G7L913|G7L913_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,37.35,0.00000005,DUF4283,Domain of unknown function
DUF4283,CUFF.20730.1
         (232 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g103960.1 | DUF4283 domain protein | LC | chr8:43764399-43...    63   2e-10
Medtr7g108760.1 | DUF4283 domain protein | LC | chr7:44356978-44...    56   2e-08
Medtr8g058470.1 | DUF4283 domain protein | LC | chr8:20135093-20...    56   2e-08
Medtr2g060030.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    55   5e-08
Medtr2g103400.1 | DUF4283 domain protein | LC | chr2:44519115-44...    54   1e-07
Medtr6g053340.1 | DUF4283 domain protein | LC | chr6:19165882-19...    54   1e-07
Medtr1148s0010.1 | DUF4283 domain protein | LC | scaffold1148:29...    53   2e-07
Medtr5g073130.1 | DUF4283 domain protein | LC | chr5:31119102-31...    53   2e-07
Medtr6g024400.1 | DUF4283 domain protein | LC | chr6:8739492-873...    53   2e-07
Medtr3g048390.1 | DUF4283 domain protein | LC | chr3:17919204-17...    52   5e-07
Medtr7g083690.1 | endonuclease/exonuclease/phosphatase family pr...    51   7e-07
Medtr5g053650.1 | DUF4283 domain protein | LC | chr5:22104331-22...    51   9e-07
Medtr5g054740.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    50   1e-06
Medtr4g005250.1 | DUF4283 domain protein | LC | chr4:141735-1402...    49   3e-06

>Medtr8g103960.1 | DUF4283 domain protein | LC |
          chr8:43764399-43764821 | 20130731
          Length = 140

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 7  WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKVT 66
          W R++ +PL  WN DFF L V   G L  VD+ T  + R+D+ARVL+S+P   I   +  
Sbjct: 15 WVRIYGIPLHAWNVDFFKLCVYDCGRLFKVDDFTVDKVRFDYARVLISTPSLEIINSEAK 74

Query: 67 IQVDDQIIN-VVMEGEGIMASED 88
          + VD ++++  ++E  G    ED
Sbjct: 75 VLVDGELLDFTIVEKWGFALGED 97


>Medtr7g108760.1 | DUF4283 domain protein | LC |
           chr7:44356978-44354950 | 20130731
          Length = 569

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKVT 66
           W RV+ VP+  WN DFF + V+ VG    +DE T  R R D+AR+L+  P   I      
Sbjct: 81  WLRVYGVPIHAWNDDFFRMCVNRVGRFIHLDECTADRARLDYARILILMPQIEIVNSTPE 140

Query: 67  IQVDDQ 72
             +DD+
Sbjct: 141 FLIDDR 146


>Medtr8g058470.1 | DUF4283 domain protein | LC |
           chr8:20135093-20137121 | 20130731
          Length = 567

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKVT 66
           W RV+ VP+  WN DFF + V+ VG    +DE T  R R D+AR+L+  P   I      
Sbjct: 81  WLRVYGVPIHAWNDDFFRMCVNRVGRFIHLDECTADRARLDYARILILMPQIEIVNSTPE 140

Query: 67  IQVDDQ 72
             +DD+
Sbjct: 141 FLIDDR 146


>Medtr2g060030.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           LC | chr2:24731568-24734132 | 20130731
          Length = 768

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPL 57
           W R++ VPL  WN +FF L V   G L  VD+ T  + R+D+ARVL+S+  
Sbjct: 418 WVRIYGVPLQAWNLEFFKLCVYDCGRLLKVDDYTVDKLRFDYARVLISTSF 468


>Medtr2g103400.1 | DUF4283 domain protein | LC |
           chr2:44519115-44517076 | 20130731
          Length = 526

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 7/136 (5%)

Query: 6   IWTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKV 65
           +W R + +PL VW    F  + S  GE    DEAT  RRR D AR+LVS+      +  V
Sbjct: 191 VWLRFYGIPLHVWEESTFKKLGSIFGEFLDFDEATIERRRLDLARILVSTNRMGFIQDVV 250

Query: 66  TIQVDDQIINVVMEGEG---IMASEDDPHQHVWSLENSSIANQEEHASIGTVVEESVARS 122
            I V   +  V +  EG   ++   +DP   VW +E+S    + E    G ++ E V   
Sbjct: 251 KINVMGAVFGVSVVEEGDVTVVDRVEDP--KVWEMESSGGVRKREGE--GKLLVEVVCAL 306

Query: 123 DEDEAAENSPESHALA 138
             +E   +S  S AL 
Sbjct: 307 VGEEGTLHSCTSLALG 322


>Medtr6g053340.1 | DUF4283 domain protein | LC |
           chr6:19165882-19167320 | 20130731
          Length = 274

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKVT 66
           W R++  P+  WN +FF L VS  G     DE T  R R DFAR+L+S+    +  + + 
Sbjct: 182 WVRIYGTPVHAWNINFFKLCVSKCGRFVREDECTLERGRIDFARILISTYSLEVLNKMMV 241

Query: 67  IQVDDQIINVVM 78
           + VD    N+ +
Sbjct: 242 LMVDGCNYNIKL 253


>Medtr1148s0010.1 | DUF4283 domain protein | LC |
           scaffold1148:292-2316 | 20130731
          Length = 604

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKVT 66
           W R++ +PL  WN + F L V   G     D+ +  + R+D+A VL+S+P   I  R   
Sbjct: 228 WLRLYGIPLHAWNENLFKLCVMECGSFLHTDDMSLDKGRFDYASVLISTPSLNIVSRVEG 287

Query: 67  IQVDDQIINV-VMEGEGIMASED 88
           + +D Q++++ ++E  G+   ED
Sbjct: 288 LSIDGQMVDIKIIEEWGLNIGED 310


>Medtr5g073130.1 | DUF4283 domain protein | LC |
           chr5:31119102-31120734 | 20130731
          Length = 401

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKVT 66
           W R++  PL  WN  FF L V   G L   DE T  ++R D+ARVLV++    +      
Sbjct: 241 WVRIYGTPLYAWNIKFFKLCVLDSGRLLQADEFTFEKQRLDYARVLVATSTLEVINSMSK 300

Query: 67  IQVDDQIINV-VMEGEGIMASED 88
           I VD+ II + ++E  G    ED
Sbjct: 301 IVVDEAIIELKIIEEWGFSLGED 323


>Medtr6g024400.1 | DUF4283 domain protein | LC |
           chr6:8739492-8737037 | 20130731
          Length = 680

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKVT 66
           W R++ +PL  WN +FF L V   G    VD  +  R R+D+ARVLV+     I ++K +
Sbjct: 331 WLRLYGIPLHTWNENFFKLCVLDYGRYLRVDSGSVDRDRFDYARVLVAFSSFEIIQKKES 390

Query: 67  IQVDDQIINV 76
           I +D   + V
Sbjct: 391 ILIDGVTVEV 400


>Medtr3g048390.1 | DUF4283 domain protein | LC |
           chr3:17919204-17917831 | 20130731
          Length = 457

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 6   IWTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSS 55
           +W R++ VPL VW+  F   + SS G +  +D  T    R DFAR+LVS+
Sbjct: 267 VWLRIYGVPLHVWHIKFLEFISSSCGRMLKIDPCTTNLERLDFARILVST 316


>Medtr7g083690.1 | endonuclease/exonuclease/phosphatase family
           protein | LC | chr7:32221247-32217435 | 20130731
          Length = 1124

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 12/111 (10%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEA-RRRYDFARVLVSSPLPFIERRKV 65
           W  ++ +P+  WN DF+ + VS  G     D+ T   R R DFARVL+S+   F+E    
Sbjct: 264 WIIIYGIPVHAWNEDFYKICVSGSGRFIRSDDCTAVDRARLDFARVLIST--TFLEVVNY 321

Query: 66  TIQVDDQIINVVME---------GEGIMASEDDPHQHVWSLENSSIANQEE 107
           T +V     N +++         GE    SE++P   + SL     A+ E+
Sbjct: 322 TFEVVIDGCNYLLKLVEEWDCNLGEDAFLSEEEPDSRLESLTFKDYASLED 372


>Medtr5g053650.1 | DUF4283 domain protein | LC |
           chr5:22104331-22105538 | 20130731
          Length = 385

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 26/186 (13%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSP----LPFIER 62
           W R + VPL VWN  FF  + ++ G L  +D+ T  + R D+A +L+S+P    +  IE+
Sbjct: 93  WVRCYGVPLHVWNDIFFLELAATQGRLLKIDDCTTNKDRLDYACLLISTPSLKEINVIEK 152

Query: 63  RKVTIQVDDQIINV-VMEGEGIMASEDDPHQHVWSLENSSIANQEEHASIGTVVEES--- 118
               + +D ++  + ++E      +EDD +       + S   QEE   + T+V++    
Sbjct: 153 ----VWIDGRMFPIRIIEDFEFGFAEDDNNSQC----SVSEGFQEEDPIVDTLVQQLQDD 204

Query: 119 -VARSDEDEAAENSPESHALAMVVCQEVGDE-EISTEVSKGVTEKEHLLGKFFENRKGTC 176
            V ++ ED+ A NS   H  +   CQ V  E E+    S  + +    + K  E   GT 
Sbjct: 205 WVTKAKEDQKA-NSVTVHQHSS-SCQPVSFEREVKENSSNPIVQH---VAKCIE---GTT 256

Query: 177 EADWCN 182
           +++ CN
Sbjct: 257 KSNPCN 262


>Medtr5g054740.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           LC | chr5:22555269-22559169 | 20130731
          Length = 878

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 30/49 (61%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSS 55
           W R++ VPL  WN   F L V   G L  +DE T  + R+D+ARVL+++
Sbjct: 500 WVRIYGVPLHAWNSKKFKLCVFDCGRLLRMDEVTVEKERFDYARVLIAT 548


>Medtr4g005250.1 | DUF4283 domain protein | LC | chr4:141735-140284
           | 20130731
          Length = 360

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 9/74 (12%)

Query: 7   WTRVWQVPLGVWNRDFFALVVSSVGELTTVDEATEARRRYDFARVLVSSPLPFIERRKVT 66
           W R++  P   WN  FF + VS  G     D+ T  R R  FARVL+S+          +
Sbjct: 286 WIRIYGTPAHAWNESFFKICVSKCGRFIRSDKCTIDRARLHFARVLIST---------TS 336

Query: 67  IQVDDQIINVVMEG 80
           I+V + I  VV++G
Sbjct: 337 IEVINSITEVVVDG 350