Miyakogusa Predicted Gene

Lj0g3v0307159.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307159.1 Non Characterized Hit- tr|B9TC41|B9TC41_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,84.48,6e-19,seg,NULL; DUF1218,Protein of unknown function
DUF1218,CUFF.20714.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g089050.1 | transmembrane protein, putative | HC | chr2:37...   226   7e-60
Medtr4g045673.1 | transmembrane protein, putative | HC | chr4:15...   208   2e-54
Medtr4g092130.1 | transmembrane protein, putative | HC | chr4:36...   178   2e-45
Medtr2g010840.1 | transmembrane protein, putative | HC | chr2:25...   165   2e-41

>Medtr2g089050.1 | transmembrane protein, putative | HC |
           chr2:37567644-37566243 | 20130731
          Length = 158

 Score =  226 bits (576), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 113/158 (71%), Positives = 123/158 (77%), Gaps = 1/158 (0%)

Query: 1   MRGKASIFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXX 60
           M  +  IFLC LIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECR+PSH AFM       
Sbjct: 1   MAREVGIFLCLLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECRDPSHKAFMFGLAASI 60

Query: 61  XXXXXXXXXXXXGGCNCLC-SQELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNH 119
                       GGC C C  Q++QK+SPNRQLSMA LILTWIVLAVGLSMLVIGT +N+
Sbjct: 61  LLSLAHVIANLLGGCGCFCFQQDIQKSSPNRQLSMAILILTWIVLAVGLSMLVIGTKTNN 120

Query: 120 KSRGSCGFTHHHFLSIGGILCFVHGLFSVAYYASATAS 157
           +S G+CGFT HHFLSIGGILCFVHGLF V+YY SATAS
Sbjct: 121 RSSGTCGFTDHHFLSIGGILCFVHGLFCVSYYVSATAS 158


>Medtr4g045673.1 | transmembrane protein, putative | HC |
           chr4:15516756-15514692 | 20130731
          Length = 160

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 119/154 (77%), Gaps = 1/154 (0%)

Query: 7   IFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXXXXXXXX 66
           I +C LIVIMD+ AGILG EAEIAQNKVKHL++WIFECREPSH+AFM             
Sbjct: 7   IVVCLLIVIMDIAAGILGFEAEIAQNKVKHLKVWIFECREPSHDAFMLGLGAAVLLGLSH 66

Query: 67  XXXXXXGGCNCLCSQ-ELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNHKSRGSC 125
                 GGCNC+CSQ E +KAS +RQLS+ CLILTW+V+AVGLSMLVIG  SN++S+ SC
Sbjct: 67  VIANLLGGCNCVCSQQEFEKASSHRQLSVVCLILTWVVVAVGLSMLVIGAMSNNRSKDSC 126

Query: 126 GFTHHHFLSIGGILCFVHGLFSVAYYASATASIN 159
           GF+HHHFLSIGG+ CFVHGLFSV YY   TAS++
Sbjct: 127 GFSHHHFLSIGGMSCFVHGLFSVIYYIVTTASMD 160


>Medtr4g092130.1 | transmembrane protein, putative | HC |
           chr4:36573376-36574588 | 20130731
          Length = 164

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/151 (55%), Positives = 109/151 (72%), Gaps = 1/151 (0%)

Query: 8   FLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXXXXXXXXX 67
            +C ++++MDV AGILGI+AEIAQNKVK L++W+ ECR+PS+ AF               
Sbjct: 8   LVCIVVILMDVVAGILGIQAEIAQNKVKDLKIWVLECRDPSYQAFKLGLSASILLVLAHA 67

Query: 68  XXXXXGGCNCLCS-QELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNHKSRGSCG 126
                GGC C+ S +E ++A+ NRQL+MA LI +WIVL V  SML+IGT +N KSR SCG
Sbjct: 68  IAHVLGGCICIKSKEEYKRATSNRQLAMAFLIFSWIVLGVAFSMLIIGTLANSKSRESCG 127

Query: 127 FTHHHFLSIGGILCFVHGLFSVAYYASATAS 157
            ++H FLSIGGILCF+HGLF+VAYY SATA+
Sbjct: 128 ISNHRFLSIGGILCFIHGLFTVAYYVSATAT 158


>Medtr2g010840.1 | transmembrane protein, putative | HC |
           chr2:2549420-2547747 | 20130731
          Length = 176

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/150 (52%), Positives = 104/150 (69%), Gaps = 1/150 (0%)

Query: 9   LCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXXXXXXXXXX 68
           +C L+++MD+ AGILGI+AEI QNK K +++WIF+CR PSH AF                
Sbjct: 9   ICILVMVMDIVAGILGIQAEITQNKEKPMKMWIFDCRYPSHQAFQLGLAALILLSLAHII 68

Query: 69  XXXXGGCNCLCSQE-LQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNHKSRGSCGF 127
               GGC C+ S++  + A+ N+QLSMA LI +W+V+AV  SML+IGT +N +SR SCG 
Sbjct: 69  ANLLGGCVCVWSKDQYRSATANKQLSMAFLIFSWLVMAVAFSMLIIGTLANSRSRKSCGI 128

Query: 128 THHHFLSIGGILCFVHGLFSVAYYASATAS 157
            +H FL IGGILCF+HGLF+V YY SATA+
Sbjct: 129 FNHRFLFIGGILCFIHGLFTVPYYVSATAT 158