Miyakogusa Predicted Gene

Lj0g3v0306839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0306839.1 tr|G7JCK0|G7JCK0_MEDTR Ketol-acid
reductoisomerase OS=Medicago truncatula GN=MTR_4g079780 PE=4
SV=1,88.92,0,GB DEF: KETOL-ACID REDUCTOISOMERASE, CHLOROPLAST
PRECURSOR (EC 1.1.1.86) (ACETOHYDROXY-A,NULL; FAMIL,CUFF.20833.1
         (410 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079780.1 | ketol-acid reductoisomerase | HC | chr4:308869...   655   0.0  
Medtr2g091205.1 | ketol-acid reductoisomerase | HC | chr2:393402...   534   e-152

>Medtr4g079780.1 | ketol-acid reductoisomerase | HC |
           chr4:30886994-30882510 | 20130731
          Length = 580

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/392 (82%), Positives = 342/392 (87%), Gaps = 1/392 (0%)

Query: 18  QTLAKPAAKCFAATNLSFSKPSLRPLRAQRCVAVGTGALGARMVSAAPVASPAKLDFDTA 77
           +TL KP    FAA NLSFSK   + ++A+RC+AVG GA+GARMVSA P   PAKLDF+T+
Sbjct: 17  KTLTKPTTTSFAAANLSFSKLYPQSVKARRCIAVG-GAVGARMVSAPPATLPAKLDFETS 75

Query: 78  IFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEA 137
           IFKKERVNLAGH+E+IVKGGRDLFHLLPD+FKGIKQIGVIGWGSQGPAQAQNLRDSLAEA
Sbjct: 76  IFKKERVNLAGHEEFIVKGGRDLFHLLPDSFKGIKQIGVIGWGSQGPAQAQNLRDSLAEA 135

Query: 138 KSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETISGSDLVLLLISDSAQADNYEK 197
           KSDIVVKIGLRKGS SFNEAR AGF+EE+GTLGDI+ETISGSDLVLLLISDSAQADNYEK
Sbjct: 136 KSDIVVKIGLRKGSRSFNEAREAGFTEESGTLGDIWETISGSDLVLLLISDSAQADNYEK 195

Query: 198 IFSSMKPNSIXXXXXXXXXXXXXXXXXDFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGA 257
           IFS MKPNSI                 DFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGA
Sbjct: 196 IFSHMKPNSILGLSHGFLLGHLQSVGLDFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGA 255

Query: 258 GINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIV 317
           GINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIV
Sbjct: 256 GINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIV 315

Query: 318 ESLFRRYTENGMAEDLAYKNTVEXXXXXXXXXXXXXXMLAVYNSFSEEGKREFEKAYSAS 377
           ESLFRR+TENGM+EDLAYKNTVE              MLAVYN+ SE+GKREFEKAYSAS
Sbjct: 316 ESLFRRFTENGMSEDLAYKNTVESITGVISKTISTKGMLAVYNALSEDGKREFEKAYSAS 375

Query: 378 FYPCMDILYECYEDVASGSEIRSVVLAGRRFY 409
           FYPCMDILYECYEDVASGSEIRSVVLAGRRFY
Sbjct: 376 FYPCMDILYECYEDVASGSEIRSVVLAGRRFY 407


>Medtr2g091205.1 | ketol-acid reductoisomerase | HC |
           chr2:39340271-39344622 | 20130731
          Length = 581

 Score =  534 bits (1375), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 270/371 (72%), Positives = 290/371 (78%), Gaps = 23/371 (6%)

Query: 40  LRPLRAQRCVAVGTGALGARMVSAAPVAS-PAKLDFDTAIFKKERVNLAGHDEYIVKGGR 98
            + L   R   + T +L ARMVSA P    PA LDFDT++FKKE+VNLAGH+E+IV+GGR
Sbjct: 59  FKTLSLHRRTGIITSSLAARMVSAPPATKLPASLDFDTSLFKKEKVNLAGHEEFIVRGGR 118

Query: 99  DLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEAR 158
           DLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEA SDIVVK+GLRKGSSSF EAR
Sbjct: 119 DLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEANSDIVVKVGLRKGSSSFAEAR 178

Query: 159 GAGFSEENGTLGDIYETISGSDLVLLLISDSAQADNYEKIFSSMKPNSIXXXXXXXXXXX 218
            AGFSEENGTLGDI+ETISGSDL LLLISDSAQADNYEKI S MKPNSI           
Sbjct: 179 DAGFSEENGTLGDIWETISGSDLALLLISDSAQADNYEKILSHMKPNSILGLSHGFLLGH 238

Query: 219 XXXXXXDFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVAL 278
                 DFPK+ SVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH+DVDGRATDVAL
Sbjct: 239 LQFLGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHRDVDGRATDVAL 298

Query: 279 GWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRYTENGMAEDLAYKNT 338
           GWSVAL                      GILLGAVHGIVESLFRRYTE+GMA+DL YKN 
Sbjct: 299 GWSVAL----------------------GILLGAVHGIVESLFRRYTESGMAKDLTYKNI 336

Query: 339 VEXXXXXXXXXXXXXXMLAVYNSFSEEGKREFEKAYSASFYPCMDILYECYEDVASGSEI 398
           VE              MLAVYN+ SE+GK+EFEKAYSASFYPCM+ILYECYEDVASGSEI
Sbjct: 337 VESITGVISRTISTKGMLAVYNALSEDGKKEFEKAYSASFYPCMEILYECYEDVASGSEI 396

Query: 399 RSVVLAGRRFY 409
           R+VVLAGR FY
Sbjct: 397 RNVVLAGRHFY 407