Miyakogusa Predicted Gene
- Lj0g3v0305559.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0305559.1 tr|E4X3Y0|E4X3Y0_OIKDI Whole genome shotgun
assembly, reference scaffold set, scaffold scaffold_10
O,35.55,3e-18,PATTERN FORMATION PROTEIN,NULL; GUANYL-NUCLEOTIDE
EXCHANGE FACTOR,NULL; seg,NULL,CUFF.20573.1
(553 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g080650.1 | pattern formation protein GNOM protein | HC | ... 852 0.0
Medtr3g068130.1 | pattern formation protein GNOM protein | HC | ... 757 0.0
Medtr3g068140.1 | pattern formation protein GNOM protein | HC | ... 732 0.0
Medtr6g086260.1 | ARF guanine-nucleotide exchange factor GNOM pr... 198 1e-50
Medtr8g036080.1 | brefeldin A-inhibited guanine nucleotide-excha... 62 1e-09
Medtr7g075030.1 | brefeldin A-inhibited guanine nucleotide-excha... 53 8e-07
>Medtr5g080650.1 | pattern formation protein GNOM protein | HC |
chr5:34512394-34520250 | 20130731
Length = 1465
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/545 (78%), Positives = 456/545 (83%), Gaps = 3/545 (0%)
Query: 1 MANDAAEESELSSETGHGKRXXXXXXXXXXXXXXTPKRSLGLMSRFSQLLYLGTEESRSV 60
MANDAAEESE S+ETG+GKR TPKRS G +SRFSQLLYLG EE+RS
Sbjct: 915 MANDAAEESEPSTETGNGKRYANSLSSSQLLSVNTPKRSSGFISRFSQLLYLGAEETRSE 974
Query: 61 PSEEQHAAQQSAFETIQKCHIDSIFTESKFLQAESLLQLVKALNSAGVRPKKGHSTPEDE 120
PSEEQ AAQQ + +TIQKCHI+SIFTESKFLQAESLL LVKAL SAGVRPKKG+ T EDE
Sbjct: 975 PSEEQLAAQQCSLQTIQKCHIESIFTESKFLQAESLLHLVKALKSAGVRPKKGNGTSEDE 1034
Query: 121 DTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICHRL 180
DTSVFCLELLVAITLNNRDRIELLWQ VYEHISNIVQSTVMPC VEKAVFGLLRICHRL
Sbjct: 1035 DTSVFCLELLVAITLNNRDRIELLWQDVYEHISNIVQSTVMPCTQVEKAVFGLLRICHRL 1094
Query: 181 LPYKENMTDELLRSLQLVLKLDARVADTYYEQITQDVSHLVKANASHIRSQLGWRTITSL 240
LPYKENMTDELLRSLQLVLKLDARVADTYYEQITQ+VS+LVKANASHIRSQLGWRTITSL
Sbjct: 1095 LPYKENMTDELLRSLQLVLKLDARVADTYYEQITQEVSNLVKANASHIRSQLGWRTITSL 1154
Query: 241 LSITARHLESSEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVVALDL 300
LSITARHLESSEAGFDAL FIMSDGAH+LP+N+ LC+DAAKQFAESRVGQVERSVVALDL
Sbjct: 1155 LSITARHLESSEAGFDALFFIMSDGAHILPSNFALCVDAAKQFAESRVGQVERSVVALDL 1214
Query: 301 MAGSVNCLEKWANDAKQAMKEEEVAKMLQDIGDMWXXXXXXXXXXXXDQREEVRNHALLS 360
MAGS+NC EKWANDAKQA EE+AKMLQ+I DMW DQREEVRNHALLS
Sbjct: 1215 MAGSINCFEKWANDAKQATT-EEMAKMLQNIEDMWLRLVQGLKKLCMDQREEVRNHALLS 1273
Query: 361 LQNCLTGSVGIHLPHDLWLQCFDQVIFTVLDDLLEISQTLSPKDYRNMEGTXXXXXXXXX 420
LQNCLT SVGIHLPHDLWLQCFDQVIFTVLDDLLE SQT SPKDYRNMEGT
Sbjct: 1274 LQNCLTASVGIHLPHDLWLQCFDQVIFTVLDDLLESSQTHSPKDYRNMEGTLILALKLLS 1333
Query: 421 XXXXXXXXXXSQLPDFSKLWLSVLNRLEIYMKVKFRGRRSEKLQELVPELLKNTLLVMKA 480
SQ DFSKLWL+VLNR EI+MKVK RGRRSEK QELVPEL+KNTLLVMKA
Sbjct: 1334 KVFLLLLQDLSQSTDFSKLWLNVLNRFEIFMKVKIRGRRSEKFQELVPELMKNTLLVMKA 1393
Query: 481 GSVLARSSSEGN--SFWELTWLHINNIAPSLQSEVFPEQDSEHLQHKQTEQIGGSGPDGN 538
VL +SSS G+ S WELTW+HINNIAPSLQSEVFPEQ+++ L+ ++ EQ+G GP N
Sbjct: 1394 SHVLEQSSSSGDEKSLWELTWVHINNIAPSLQSEVFPEQEAKQLEQEKAEQVGDRGPAEN 1453
Query: 539 VSAPS 543
VSAPS
Sbjct: 1454 VSAPS 1458
>Medtr3g068130.1 | pattern formation protein GNOM protein | HC |
chr3:30759420-30752039 | 20130731
Length = 1474
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/546 (69%), Positives = 427/546 (78%), Gaps = 1/546 (0%)
Query: 1 MANDAAEESELSSETGHGKRXXXXXXXXXXXXXXTPKRSLGLMSRFSQLLYLGTEESRSV 60
+A+DAA+ESELS+ET HGK TP+RS GLM RFSQLL L TEE RS
Sbjct: 918 VASDAADESELSAETVHGKPIVNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQ 977
Query: 61 PSEEQHAAQQSAFETIQKCHIDSIFTESKFLQAESLLQLVKALNSAGVRPKKGHSTPEDE 120
P+E+Q AA Q +TIQKCHIDSIFTESKFLQA+SL QL KAL A RP+K +STPEDE
Sbjct: 978 PTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAKSLEQLAKALIWAAGRPQKVNSTPEDE 1037
Query: 121 DTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICHRL 180
DT+VFCLELL+AITLNNRDRI +LW GVY+HISNIVQSTVMPCALVEKAVFGLLRIC RL
Sbjct: 1038 DTAVFCLELLIAITLNNRDRIGILWPGVYDHISNIVQSTVMPCALVEKAVFGLLRICQRL 1097
Query: 181 LPYKENMTDELLRSLQLVLKLDARVADTYYEQITQDVSHLVKANASHIRSQLGWRTITSL 240
LPYKEN+ DELLRSLQLVLKLDARVAD Y EQITQ+VS LVKANASHIRSQLGWR ITSL
Sbjct: 1098 LPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRAITSL 1157
Query: 241 LSITARHLESSEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVVALDL 300
LSITARH+E+SEAGFDALLFIMSDGAHLLPANYVLC+D A+QFAESRVGQ ERSV ALDL
Sbjct: 1158 LSITARHIEASEAGFDALLFIMSDGAHLLPANYVLCVDTARQFAESRVGQAERSVRALDL 1217
Query: 301 MAGSVNCLEKWANDAKQAMKEEEVAKMLQDIGDMWXXXXXXXXXXXXDQREEVRNHALLS 360
M GSVNCL +W ++ K+AM++E++ K+ +DIGDMW DQREEVRNHAL S
Sbjct: 1218 MTGSVNCLAQWTSEGKEAMEDEQMTKLSKDIGDMWLILGQGLRKVCLDQREEVRNHALSS 1277
Query: 361 LQNCLTGSVGIHLPHDLWLQCFDQVIFTVLDDLLEISQTLSPKDYRNMEGTXXXXXXXXX 420
LQ CL G+ I+LP+ WL CFD VIFTVLDDLLEISQ S KDYRNMEGT
Sbjct: 1278 LQKCLIGADDIYLPYGKWLDCFDLVIFTVLDDLLEISQGHSQKDYRNMEGTLILAVKLLS 1337
Query: 421 XXXXXXXXXXSQLPDFSKLWLSVLNRLEIYMKVKFRGRRSEKLQELVPELLKNTLLVMKA 480
SQL F KLWL VL R+E YMKVK RG+RSEKLQE VP+LLKN+LL MK
Sbjct: 1338 KVFLQSLPVLSQLTTFCKLWLGVLTRMEKYMKVKVRGKRSEKLQETVPDLLKNSLLAMKM 1397
Query: 481 GSVLA-RSSSEGNSFWELTWLHINNIAPSLQSEVFPEQDSEHLQHKQTEQIGGSGPDGNV 539
+LA RS+ G+S WELTWLH+NNI+PSLQ EVFPEQDSEH Q+KQ E +GG PD V
Sbjct: 1398 RGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPEQDSEHSQYKQGESVGGLLPDEKV 1457
Query: 540 SAPSNE 545
S PS+E
Sbjct: 1458 SVPSSE 1463
>Medtr3g068140.1 | pattern formation protein GNOM protein | HC |
chr3:30775252-30768570 | 20130731
Length = 1473
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/555 (67%), Positives = 425/555 (76%), Gaps = 2/555 (0%)
Query: 1 MANDAAEESELSSETGHGKRXXXXXXXXXXXXXXTPKRSLGLMSRFSQLLYLGTEESRSV 60
+A+DA +ESE S++TG GK TPKRS GL+SRFSQLL L T+E R++
Sbjct: 917 LASDAVDESEPSTKTGRGKLNSNSFSSTHLQSISTPKRSSGLLSRFSQLLSLATDEPRAI 976
Query: 61 PSEEQHAAQQSAFETIQKCHIDSIFTESKFLQAESLLQLVKALNSAGVRPKKGHSTPEDE 120
P+EEQ AA A +TIQKCHIDSIFTESKFLQAESLLQLV++L +AG + +KG ++E
Sbjct: 977 PTEEQLAAHHQAVQTIQKCHIDSIFTESKFLQAESLLQLVRSLINAGAQSQKGSKKSQNE 1036
Query: 121 DTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICHRL 180
DTSVFCLELLVAITLNNRDRI L+W+GVYEHISNIV+STVMPCALVEKAVFGLLRICHRL
Sbjct: 1037 DTSVFCLELLVAITLNNRDRIGLIWKGVYEHISNIVKSTVMPCALVEKAVFGLLRICHRL 1096
Query: 181 LPYKENMTDELLRSLQLVLKLDARVADTYYEQITQDVSHLVKANASHIRSQLGWRTITSL 240
LPYKENM DELL+SLQL+LKLDA VAD YY+QITQ+VS LVKANAS IRS +GWRTITSL
Sbjct: 1097 LPYKENMADELLKSLQLILKLDALVADVYYDQITQEVSRLVKANASRIRSHIGWRTITSL 1156
Query: 241 LSITARHLESSEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVVALDL 300
LS+TARHLE+SE GFD L FIMSDG +LLPANY+LCIDAA+QFAESRVG V+RS+ +LDL
Sbjct: 1157 LSVTARHLEASEVGFDTLSFIMSDGNYLLPANYILCIDAARQFAESRVGLVDRSIGSLDL 1216
Query: 301 MAGSVNCLEKWANDAKQAMKEEEVAKMLQDIGDMWXXXXXXXXXXXXDQREEVRNHALLS 360
M GS NCL+KW +DAKQA KEEEVAKMLQDIG+MW DQREEVRNHALLS
Sbjct: 1217 MVGSFNCLQKWTSDAKQAAKEEEVAKMLQDIGEMWLRLVQGLRKVCLDQREEVRNHALLS 1276
Query: 361 LQNCLTGSVGIHLPHDLWLQCFDQVIFTVLDDLLEISQTLSPKDYRNMEGTXXXXXXXXX 420
LQ C+T + HLP DLWLQCFDQVIFT+LDDLL+ISQ S KDYRN+E T
Sbjct: 1277 LQKCMTEAGKTHLPGDLWLQCFDQVIFTLLDDLLDISQERSQKDYRNIEETLTLALKLLF 1336
Query: 421 XXXXXXXXXXSQLPD-FSKLWLSVLNRLEIYMKVKFRGRRSEKLQELVPELLKNTLLVMK 479
SQL + F KLW+ VL+ E YMKVK RG+RSE LQ VPELLKN L+VMK
Sbjct: 1337 KVFLLLLQELSQLEEAFCKLWVGVLSHAEKYMKVKVRGKRSEMLQLPVPELLKNALVVMK 1396
Query: 480 AGSVLARSSSEGNS-FWELTWLHINNIAPSLQSEVFPEQDSEHLQHKQTEQIGGSGPDGN 538
+G +L SS S WELTWLH+ NIAPSLQSEVF E D+E LQ KQ E +G D
Sbjct: 1397 SGGILVESSGLAESNLWELTWLHMKNIAPSLQSEVFQEHDAEQLQQKQIETVGDLESDAK 1456
Query: 539 VSAPSNETTGQDVPG 553
+S PSNET GQD G
Sbjct: 1457 ISVPSNETLGQDGAG 1471
>Medtr6g086260.1 | ARF guanine-nucleotide exchange factor GNOM protein
| HC | chr6:32377569-32372832 | 20130731
Length = 1372
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 236/496 (47%), Gaps = 23/496 (4%)
Query: 35 TPKRSLGLMSRFSQLLYLGTEESRSVPSE-EQHAAQQSAFETIQKCHIDSIFTESKFLQA 93
T R +M+R S L +E+ ++ SE EQ+ + I+ C I SIF S +
Sbjct: 884 THHRFPSVMTRLSLLSQENSEDGLTLGSEFEQN------LKMIKLCRIGSIFGSSSNIPK 937
Query: 94 ESLLQLVKALNSAGVRPKKGHSTP-EDEDTSVFCLELLVAITLNNRDRIELLWQGVYEHI 152
E L L ++L A + STP E+E+T FC +L+ A++L N R + W +E++
Sbjct: 938 ECLQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLITALSLANVHRFHIFWPNFHEYL 997
Query: 153 SNIVQSTVM-PCALVEKAVFGLLRICHRLL--PYKENMTDELL-RSLQLVLKLDARVADT 208
+ Q + P EKA+ LL++C +L P ++ + +EL+ +S+ L+ KLD + D
Sbjct: 998 LTVAQFPMFSPIPFAEKALLALLKVCLKLFSTPREDKLAEELIFKSITLMWKLDKEILDM 1057
Query: 209 YYEQITQDVSHLVKANASHIRSQLGWRTITSLLSITARHLESSEAGFDALLFIMSDGAHL 268
YE I Q +S +V +++++Q+GW+++ +LLS+ RH E+ + +AL+ + SD ++
Sbjct: 1058 CYEIIAQLMSKIVIQYPANLQTQVGWKSVLNLLSVAWRHPETYDLAIEALISLFSDATNV 1117
Query: 269 LPANYVLCIDAAKQFAESRVGQVERSVVALDLMAGSVNCLEKW----ANDAKQAMKEEEV 324
NY ID A ++ +E+ LDL+A S N L +W D +
Sbjct: 1118 TRTNYAYLIDCAFGCFLAKNSPIEKKKKILDLLADSTNLLVQWQRTQYTDPGSNVSVVSN 1177
Query: 325 AKMLQDIGDMWXXXXXXXXXXXXDQREEVRNHALLSLQNCLTGSVGIHLPHDLWLQCFDQ 384
+ ++EE+RNHA+ SL + + + F+
Sbjct: 1178 TSSSSAEDNFRGPSSANYNMNFLSRQEEIRNHAVYSLHKSFNLAEEMLYTSSNCISYFNL 1237
Query: 385 VIFTVLDDLLEISQTLSPKD-----YRNMEGTXXXXXXXXXXXXXXXXXXXSQLPDFSKL 439
VIF ++D+L E S +D R+MEGT ++ P F
Sbjct: 1238 VIFAMVDELHEKMLEYSRRDNAEREMRSMEGTLKLAMELLSAMYLQSLRQITESPGFRAF 1297
Query: 440 WLSVLNRLEIYMKVKFRGRRSEKLQELVPELLKNTLLVMKAGSVLARSSSEGNSFWELTW 499
WL VL R++ MK + L E++P+LLK + MK +L E + WE+T+
Sbjct: 1298 WLGVLRRMDTCMKAELGHYGPSSLSEIIPDLLKKIITQMKDEGIL--EPKEDDDMWEITY 1355
Query: 500 LHINNIAPSLQSEVFP 515
+ I I P L+ E+FP
Sbjct: 1356 IQIQWICPRLKDELFP 1371
>Medtr8g036080.1 | brefeldin A-inhibited guanine nucleotide-exchange
protein | HC | chr8:13263130-13249409 | 20130731
Length = 1784
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 155/376 (41%), Gaps = 48/376 (12%)
Query: 52 LGTEESRSVPSEEQH--AAQQSAFETIQKCHIDSIFTESKFLQAESLLQLVKALNSAGVR 109
+G SR+V SE+ + + + E + ++ IFT S+ L +E+++ VKAL +
Sbjct: 1043 IGGNASRAVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKLSMD 1102
Query: 110 PKKGHSTPEDEDTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKA 169
+ S P VF L +V I N +RI L+W ++ +S+ T+ A + A
Sbjct: 1103 ELRSPSDPR-----VFSLTKMVEIAHYNMNRIRLVWSSIWHVLSDFF-VTIGCSANLSIA 1156
Query: 170 VFG---LLRICHRLLPYKE----NMTDELLRSLQLVLKLDARVADTYYEQITQDVSHLVK 222
+F L ++ + L +E N +E ++ +V++ V E I + VS +V
Sbjct: 1157 IFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAV--EIRELIIRCVSQMVL 1214
Query: 223 ANASHIRSQLGWRTITSLLSITAR--HLESSEAGFDALLFIMSDGAHLLPANYVL----C 276
+ ++++S GW+++ + + A H F+ + I+ D + C
Sbjct: 1215 SRVNNVKS--GWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDC 1272
Query: 277 IDAAKQFAESRVGQVERSVVALDLMAGSVNCLEKWANDAKQAMKEEEVAKML-------- 328
++ F SR Q E S+ A+ + L + + K++EV+ +
Sbjct: 1273 VNCLIAFTNSRFNQ-EISLNAIGFLRFCATKLAEGDLGSSSRNKDKEVSGNISILSPQEG 1331
Query: 329 ----QDIGDM---------WXXXXXXXXXXXXDQREEVRNHALLSLQNCLTGSVGIHLPH 375
QD G++ W D R EVR AL L L G
Sbjct: 1332 KDGNQDSGEVTNKGYHVNFWFPLLAGLSELSFDPRPEVRKSALDVLFETLRNH-GHLFSL 1390
Query: 376 DLWLQCFDQVIFTVLD 391
LW + F+ V+F + D
Sbjct: 1391 PLWERIFESVLFPIFD 1406
>Medtr7g075030.1 | brefeldin A-inhibited guanine nucleotide-exchange
protein | HC | chr7:28133137-28145031 | 20130731
Length = 1789
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 153/376 (40%), Gaps = 48/376 (12%)
Query: 52 LGTEESRSVPSEEQHA--AQQSAFETIQKCHIDSIFTESKFLQAESLLQLVKALNSAGVR 109
+G+ + ++ SE+ ++ + + E + ++ IFT S+ L +E+++ VKAL +
Sbjct: 1042 IGSNAAGAITSEQVNSLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSME 1101
Query: 110 PKKGHSTPEDEDTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKA 169
+ S P VF L +V I N +RI L+W ++ +S+ T+ + A
Sbjct: 1102 ELRSPSDPR-----VFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFF-VTIGCSGNLSIA 1155
Query: 170 VFG---LLRICHRLLPYKE----NMTDELLRSLQLVLKLDARVADTYYEQITQDVSHLVK 222
+F L ++ + L +E N +E ++ +V++ + V E I + VS +V
Sbjct: 1156 IFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAV--EIRELIIRCVSQMVL 1213
Query: 223 ANASHIRSQLGWRTITSLLSITAR--HLESSEAGFDALLFIMSDGAHLLPANYVL----C 276
+ ++++S GW+++ + + A H F+ + I+ D + C
Sbjct: 1214 SRVNNVKS--GWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDC 1271
Query: 277 IDAAKQFAESRVGQVERSVVALDLMAGSVNCLEKWANDAKQAMKEEEVAKML-------- 328
++ F SR + E S+ A+ + L + + K +E + +
Sbjct: 1272 VNCLIAFTNSRFNK-EISLNAITFLRFCATKLAEGDLGSSSRNKGKETSGKISTASPRTG 1330
Query: 329 ----QDIGDM---------WXXXXXXXXXXXXDQREEVRNHALLSLQNCLTGSVGIHLPH 375
D G++ W D R E+R AL L L G
Sbjct: 1331 KEGRHDNGEVTDKDDHLYFWFPLLAGLSELSFDPRSEIRQSALQVLFETLRNH-GHLFSL 1389
Query: 376 DLWLQCFDQVIFTVLD 391
LW + F+ V+F + D
Sbjct: 1390 PLWERVFESVLFPIFD 1405