Miyakogusa Predicted Gene

Lj0g3v0304929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304929.1 Non Characterized Hit- tr|E3L555|E3L555_PUCGT
Putative uncharacterized protein OS=Puccinia graminis
,46.94,2e-17,Got1,Vesicle transport protein, Got1/SFT2-like;
UNCHARACTERIZED,Vesicle transport protein, SFT2-like,CUFF.20515.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g026920.1 | Got1/SFT2-like vescicle transporter family pro...   176   4e-45
Medtr1g026920.2 | Got1/SFT2-like vescicle transporter family pro...   119   7e-28
Medtr6g064950.1 | Got1/SFT2-like vescicle transporter family pro...    95   1e-20

>Medtr1g026920.1 | Got1/SFT2-like vescicle transporter family
           protein | HC | chr1:8852447-8858166 | 20130731
          Length = 162

 Score =  176 bits (446), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/112 (77%), Positives = 94/112 (83%)

Query: 1   MLLSLIVFAKPIKFALLFTFGHLLAVGSTAFLLGPAQQLQMMLDPVRVFATAIFLGCVVV 60
           MLLS+IVFAKPIKFA+LFTFG+L AVGSTAFLLGPAQQ++MM DPVRVFATAI+LGCVV+
Sbjct: 51  MLLSMIVFAKPIKFAVLFTFGNLSAVGSTAFLLGPAQQMEMMFDPVRVFATAIYLGCVVI 110

Query: 61  ALICALWIHSKXXXXXXXXXXXXXXXWYSLSYIPFARRMVSELMIRLCDTEL 112
           ALICAL IHSK               WYSLSYIPFARRMVSELMIRLCDTEL
Sbjct: 111 ALICALLIHSKVLTLLAIIIEICALMWYSLSYIPFARRMVSELMIRLCDTEL 162


>Medtr1g026920.2 | Got1/SFT2-like vescicle transporter family
           protein | HC | chr1:8852374-8858380 | 20130731
          Length = 149

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 66/69 (95%)

Query: 1   MLLSLIVFAKPIKFALLFTFGHLLAVGSTAFLLGPAQQLQMMLDPVRVFATAIFLGCVVV 60
           MLLS+IVFAKPIKFA+LFTFG+L AVGSTAFLLGPAQQ++MM DPVRVFATAI+LGCVV+
Sbjct: 51  MLLSMIVFAKPIKFAVLFTFGNLSAVGSTAFLLGPAQQMEMMFDPVRVFATAIYLGCVVI 110

Query: 61  ALICALWIH 69
           ALICAL ++
Sbjct: 111 ALICALLVN 119


>Medtr6g064950.1 | Got1/SFT2-like vescicle transporter family
           protein | HC | chr6:24054776-24057625 | 20130731
          Length = 123

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 59/85 (69%)

Query: 27  GSTAFLLGPAQQLQMMLDPVRVFATAIFLGCVVVALICALWIHSKXXXXXXXXXXXXXXX 86
            + AFL+GP +Q+ MMLDPVR++ATAI++  +++AL CAL++H+K               
Sbjct: 38  STQAFLIGPKRQVSMMLDPVRIYATAIYIASMIIALFCALYVHNKLLTFLAIILEFGALV 97

Query: 87  WYSLSYIPFARRMVSELMIRLCDTE 111
           WYSLSYIPFAR MVS++M+   DTE
Sbjct: 98  WYSLSYIPFARSMVSKIMVSCFDTE 122