Miyakogusa Predicted Gene

Lj0g3v0304719.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304719.1 Non Characterized Hit- tr|C6T8K1|C6T8K1_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,86.27,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; GLYCOSYL
TRANSFERASE-RELATED,Oligosaccharide biosynthesis protei,CUFF.20499.1
         (233 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103770.1 | UDP-N-acetylglucosamine transferase subunit AL...   338   3e-93
Medtr5g029710.1 | ALG14-like oligosaccharide biosynthesis protei...    91   1e-18

>Medtr2g103770.1 | UDP-N-acetylglucosamine transferase subunit ALG14
           | HC | chr2:44670465-44672174 | 20130731
          Length = 233

 Score =  338 bits (866), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 173/233 (74%), Positives = 188/233 (80%)

Query: 1   MDKGXXXXXXXXXXXXXXXXVIFTVSLIVVRVLYVLYCSSRPLSKRALKPVSTLIILGSG 60
           M+KG                V F V LI+VRV++V+Y S RPLSKRA KPVSTLIILGSG
Sbjct: 1   MEKGNGCCFSSLSSIATLSSVAFVVILILVRVVHVIYSSGRPLSKRASKPVSTLIILGSG 60

Query: 61  GHTAEMLNLLAVLQKDRFNPRFYIAAATDNMSLQKAQLLENSLEAENGSSVTGAAQFMKI 120
           GHTAEMLNLLAVLQKDRF PRFYIAAATDNMSLQKA LLENSL +E+G++V   AQFMKI
Sbjct: 61  GHTAEMLNLLAVLQKDRFKPRFYIAAATDNMSLQKAILLENSLASESGTAVADTAQFMKI 120

Query: 121 YRSREVGQSYITSVWTTLIAMVHALWLMIKIRPEVILCNGPGTCIPLCAIAFIFKVMGIR 180
           YRSREVGQSYITS+WTTLIA+VHALWLMIKIRPEVILCNGPGTCIPLC IAFIFKV+GIR
Sbjct: 121 YRSREVGQSYITSIWTTLIAIVHALWLMIKIRPEVILCNGPGTCIPLCVIAFIFKVLGIR 180

Query: 181 WSSIFYVESIAXXXXXXXXXXXXXXXXMADQLFVQWPQLQRQYPRATYVGRLM 233
           WSSIFYVESIA                +ADQ+FVQWPQLQ+QYPRATYVGRLM
Sbjct: 181 WSSIFYVESIARVRRLSLSGLLLYKLWLADQIFVQWPQLQQQYPRATYVGRLM 233


>Medtr5g029710.1 | ALG14-like oligosaccharide biosynthesis protein
          | HC | chr5:12497325-12497680 | 20130731
          Length = 90

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/56 (78%), Positives = 50/56 (89%)

Query: 23 FTVSLIVVRVLYVLYCSSRPLSKRALKPVSTLIILGSGGHTAEMLNLLAVLQKDRF 78
          F V LI+VR ++V+Y S +PLSKRALKPVSTLIILGSGGHTAEMLNLL VL+KDRF
Sbjct: 23 FVVILILVRAIHVIYRSGKPLSKRALKPVSTLIILGSGGHTAEMLNLLTVLEKDRF 78