Miyakogusa Predicted Gene

Lj0g3v0304679.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304679.1 Non Characterized Hit- tr|D7L9M0|D7L9M0_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,54.43,0.0000000000005,seg,NULL; TPX2,Xklp2 targeting
protein,CUFF.20497.1
         (117 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g022230.1 | TPX2 (targeting protein for Xklp2) family prot...   113   3e-26
Medtr1g012530.1 | TPX2 (targeting protein for Xklp2) family prot...    50   6e-07
Medtr3g107050.1 | TPX2 (targeting protein for Xklp2) family prot...    48   2e-06
Medtr3g107050.2 | TPX2 (targeting protein for Xklp2) family prot...    48   2e-06

>Medtr6g022230.1 | TPX2 (targeting protein for Xklp2) family
           protein, putative | HC | chr6:7750365-7745249 | 20130731
          Length = 572

 Score =  113 bits (283), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 69/106 (65%), Gaps = 2/106 (1%)

Query: 1   MRSPVITSPFNXXXXXXXXXXXXXXXXXFNANEPQKVQ-LHTKLKEKAGTEIR-KLSQSF 58
           MRSP+I+SPF+                 FNANE QKVQ LHTKLKEK G+EIR KL QSF
Sbjct: 407 MRSPIISSPFSLRTEERAARRKKKLEEKFNANEEQKVQQLHTKLKEKTGSEIRRKLRQSF 466

Query: 59  CFKARPLPDFYKERPASINETRKNPWPHSESPKEGRKPIPCMAEGK 104
           CF+ARPLPDFYKER AS  ETRK    H ES  EGR PI  M E K
Sbjct: 467 CFQARPLPDFYKERKASNIETRKVIQTHYESSNEGRHPILSMKECK 512


>Medtr1g012530.1 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr1:2520568-2514968 | 20130731
          Length = 459

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 29  FNANEPQKVQLHTKLKEKAGTEIRKLSQSFCFKARPLPDFYKERPASINETRKNPWPHSE 88
             A E +K  L  K KE    EI+KL +S  FKA PLP FY+E      E +K P   ++
Sbjct: 250 IQAKEEEKSSLQAKSKESQEAEIKKLRKSLTFKATPLPTFYQEPAPPKVELKKIPTTRAK 309

Query: 89  SPKEGRKPIPCMAE--GKNFFTSKQ 111
           SPK GRK     +E  G    +S+Q
Sbjct: 310 SPKLGRKKTSTNSESDGNGSCSSRQ 334


>Medtr3g107050.1 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr3:49471851-49476541 | 20130731
          Length = 453

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%)

Query: 29  FNANEPQKVQLHTKLKEKAGTEIRKLSQSFCFKARPLPDFYKERPASINETRKNPWPHSE 88
            +A E ++  +  K KE    EI++L +   FKA P+P FY+E   S  E +K P   ++
Sbjct: 233 IHAKEVEESNIQAKTKESQEAEIKRLRKKLAFKATPMPSFYQEPTPSRVELKKIPTTRAK 292

Query: 89  SPKEGRKPIPCMA 101
           SPK GRK    M+
Sbjct: 293 SPKLGRKKSSTMS 305


>Medtr3g107050.2 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr3:49472302-49476481 | 20130731
          Length = 453

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%)

Query: 29  FNANEPQKVQLHTKLKEKAGTEIRKLSQSFCFKARPLPDFYKERPASINETRKNPWPHSE 88
            +A E ++  +  K KE    EI++L +   FKA P+P FY+E   S  E +K P   ++
Sbjct: 233 IHAKEVEESNIQAKTKESQEAEIKRLRKKLAFKATPMPSFYQEPTPSRVELKKIPTTRAK 292

Query: 89  SPKEGRKPIPCMA 101
           SPK GRK    M+
Sbjct: 293 SPKLGRKKSSTMS 305