Miyakogusa Predicted Gene

Lj0g3v0304609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304609.1 tr|E3V0H9|E3V0H9_CARPA Eukaryotic translation
initiation factor 4G OS=Carica papaya GN=eIF4G PE=2
SV,55.65,0.00000000000003,seg,NULL,
NODE_65318_length_619_cov_74.594505.path1.1
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g008680.3 | eukaryotic translation initiation factor 4G-li...    97   3e-21
Medtr8g008680.1 | eukaryotic translation initiation factor 4G-li...    97   3e-21
Medtr8g008680.5 | eukaryotic translation initiation factor 4G-li...    97   3e-21
Medtr8g008680.4 | eukaryotic translation initiation factor 4G-li...    97   3e-21
Medtr8g008755.1 | eukaryotic translation initiation factor 4G, p...    97   4e-21
Medtr8g008680.2 | eukaryotic translation initiation factor 4G-li...    75   1e-14
Medtr7g451340.2 | eukaryotic translation initiation factor 4G-li...    75   1e-14
Medtr7g451340.3 | eukaryotic translation initiation factor 4G-li...    75   1e-14
Medtr7g451340.1 | eukaryotic translation initiation factor 4G-li...    75   1e-14

>Medtr8g008680.3 | eukaryotic translation initiation factor 4G-like
           protein | HC | chr8:1821431-1811144 | 20130731
          Length = 1682

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 69/124 (55%), Gaps = 11/124 (8%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SK+++ND A YRK+GRS+SFNQQ                                
Sbjct: 1   MSYNQSKTEKND-AFYRKSGRSSSFNQQ----------RGPSGGHGRGSGGQAPASSLNS 49

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHGASDGPVTKSSE 120
                      QGGQ RVNPSPVNSTE N   AAR   NGTHVQPQ+HGASDGPV K+SE
Sbjct: 50  NRSFSKKSNNAQGGQYRVNPSPVNSTEPNSTYAARTIHNGTHVQPQMHGASDGPVAKASE 109

Query: 121 SSAA 124
           S+AA
Sbjct: 110 STAA 113


>Medtr8g008680.1 | eukaryotic translation initiation factor 4G-like
           protein | HC | chr8:1821416-1811144 | 20130731
          Length = 1684

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 69/124 (55%), Gaps = 11/124 (8%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SK+++ND A YRK+GRS+SFNQQ                                
Sbjct: 1   MSYNQSKTEKND-AFYRKSGRSSSFNQQ----------RGPSGGHGRGSGGQAPASSLNS 49

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHGASDGPVTKSSE 120
                      QGGQ RVNPSPVNSTE N   AAR   NGTHVQPQ+HGASDGPV K+SE
Sbjct: 50  NRSFSKKSNNAQGGQYRVNPSPVNSTEPNSTYAARTIHNGTHVQPQMHGASDGPVAKASE 109

Query: 121 SSAA 124
           S+AA
Sbjct: 110 STAA 113


>Medtr8g008680.5 | eukaryotic translation initiation factor 4G-like
           protein | HC | chr8:1821416-1811144 | 20130731
          Length = 1693

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 69/124 (55%), Gaps = 11/124 (8%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SK+++ND A YRK+GRS+SFNQQ                                
Sbjct: 1   MSYNQSKTEKND-AFYRKSGRSSSFNQQ----------RGPSGGHGRGSGGQAPASSLNS 49

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHGASDGPVTKSSE 120
                      QGGQ RVNPSPVNSTE N   AAR   NGTHVQPQ+HGASDGPV K+SE
Sbjct: 50  NRSFSKKSNNAQGGQYRVNPSPVNSTEPNSTYAARTIHNGTHVQPQMHGASDGPVAKASE 109

Query: 121 SSAA 124
           S+AA
Sbjct: 110 STAA 113


>Medtr8g008680.4 | eukaryotic translation initiation factor 4G-like
           protein | HC | chr8:1821416-1812357 | 20130731
          Length = 1515

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 69/124 (55%), Gaps = 11/124 (8%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SK+++ND A YRK+GRS+SFNQQ                                
Sbjct: 1   MSYNQSKTEKND-AFYRKSGRSSSFNQQ----------RGPSGGHGRGSGGQAPASSLNS 49

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHGASDGPVTKSSE 120
                      QGGQ RVNPSPVNSTE N   AAR   NGTHVQPQ+HGASDGPV K+SE
Sbjct: 50  NRSFSKKSNNAQGGQYRVNPSPVNSTEPNSTYAARTIHNGTHVQPQMHGASDGPVAKASE 109

Query: 121 SSAA 124
           S+AA
Sbjct: 110 STAA 113


>Medtr8g008755.1 | eukaryotic translation initiation factor 4G,
           putative | HC | chr8:1855340-1852560 | 20130731
          Length = 282

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 69/124 (55%), Gaps = 11/124 (8%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SK+++ND A YRK+GRS+SFNQQ                                
Sbjct: 1   MSYNQSKTEKND-AFYRKSGRSSSFNQQ----------RGPSGGHGRGSGGQAPASSLNS 49

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHGASDGPVTKSSE 120
                      QGGQ RVNPSPVNSTE N   AAR   NGTHVQPQ+HGASDGPV K+SE
Sbjct: 50  NRSFSKKSNNAQGGQYRVNPSPVNSTEPNSTYAARTIHNGTHVQPQMHGASDGPVAKASE 109

Query: 121 SSAA 124
           S+AA
Sbjct: 110 STAA 113


>Medtr8g008680.2 | eukaryotic translation initiation factor 4G-like
           protein | HC | chr8:1821416-1811144 | 20130731
          Length = 1638

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 55/109 (50%), Gaps = 11/109 (10%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SK+++ND A YRK+GRS+SFNQQ                                
Sbjct: 1   MSYNQSKTEKND-AFYRKSGRSSSFNQQ----------RGPSGGHGRGSGGQAPASSLNS 49

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHG 109
                      QGGQ RVNPSPVNSTE N   AAR   NGTHVQPQ+HG
Sbjct: 50  NRSFSKKSNNAQGGQYRVNPSPVNSTEPNSTYAARTIHNGTHVQPQMHG 98


>Medtr7g451340.2 | eukaryotic translation initiation factor 4G-like
           protein | HC | chr7:17247377-17256806 | 20130731
          Length = 1622

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 59/128 (46%), Gaps = 12/128 (9%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SKSD++D    R TGRS SFNQ R                               
Sbjct: 1   MSYNQSKSDKSDATYRRTTGRSASFNQHRGNTGGASYVKAGTGAAAPSLSSSRSFNKKPN 60

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHGASDGPVT---- 116
                      QGG  RVNP+  NS E NYASA R T NG+HVQPQ HG S   VT    
Sbjct: 61  NHA--------QGGPSRVNPTQANSAESNYASAVRATPNGSHVQPQFHGGSGASVTNATA 112

Query: 117 KSSESSAA 124
           K SESSAA
Sbjct: 113 KPSESSAA 120


>Medtr7g451340.3 | eukaryotic translation initiation factor 4G-like
           protein | HC | chr7:17247491-17256808 | 20130731
          Length = 1779

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 59/128 (46%), Gaps = 12/128 (9%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SKSD++D    R TGRS SFNQ R                               
Sbjct: 1   MSYNQSKSDKSDATYRRTTGRSASFNQHRGNTGGASYVKAGTGAAAPSLSSSRSFNKKPN 60

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHGASDGPVT---- 116
                      QGG  RVNP+  NS E NYASA R T NG+HVQPQ HG S   VT    
Sbjct: 61  NHA--------QGGPSRVNPTQANSAESNYASAVRATPNGSHVQPQFHGGSGASVTNATA 112

Query: 117 KSSESSAA 124
           K SESSAA
Sbjct: 113 KPSESSAA 120


>Medtr7g451340.1 | eukaryotic translation initiation factor 4G-like
           protein | HC | chr7:17247361-17256808 | 20130731
          Length = 1779

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 59/128 (46%), Gaps = 12/128 (9%)

Query: 1   MSFNHSKSDRNDPAAYRKTGRSTSFNQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MS+N SKSD++D    R TGRS SFNQ R                               
Sbjct: 1   MSYNQSKSDKSDATYRRTTGRSASFNQHRGNTGGASYVKAGTGAAAPSLSSSRSFNKKPN 60

Query: 61  XXXXXXXXXXXQGGQPRVNPSPVNSTEFNYASAARITSNGTHVQPQVHGASDGPVT---- 116
                      QGG  RVNP+  NS E NYASA R T NG+HVQPQ HG S   VT    
Sbjct: 61  NHA--------QGGPSRVNPTQANSAESNYASAVRATPNGSHVQPQFHGGSGASVTNATA 112

Query: 117 KSSESSAA 124
           K SESSAA
Sbjct: 113 KPSESSAA 120