Miyakogusa Predicted Gene
- Lj0g3v0304469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0304469.1 Non Characterized Hit- tr|K4BVT3|K4BVT3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.3,3e-18,DUF295,Protein of unknown function
DUF295,CUFF.20485.1
(127 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g114990.1 | ubiquitin-protein ligase | HC | chr3:53705316-... 141 2e-34
Medtr3g114990.3 | ubiquitin-protein ligase | HC | chr3:53705316-... 141 2e-34
Medtr3g114990.2 | ubiquitin-protein ligase | HC | chr3:53705316-... 141 2e-34
Medtr3g114970.1 | ubiquitin-protein ligase | HC | chr3:53695038-... 108 1e-24
Medtr3g114970.2 | ubiquitin-protein ligase | HC | chr3:53695038-... 108 1e-24
Medtr3g030050.1 | F-box SKIP23-like protein | HC | chr3:9484905-... 61 3e-10
Medtr3g029640.1 | F-box SKIP23-like protein | LC | chr3:9337600-... 60 7e-10
Medtr3g029920.1 | F-box protein | LC | chr3:9433853-9432699 | 20... 59 2e-09
Medtr3g029620.1 | F-box SKIP23-like protein | LC | chr3:9330826-... 57 6e-09
Medtr3g037710.1 | F-box SKIP23-like protein | LC | chr3:13864923... 56 8e-09
Medtr5g082780.1 | DUF295 family protein | LC | chr5:35629399-356... 53 9e-08
Medtr3g092000.1 | F-box SKIP23-like protein | LC | chr3:41986657... 52 1e-07
Medtr1g064570.1 | ubiquitin-protein ligase | LC | chr1:28409366-... 52 2e-07
Medtr3g058460.1 | F-box SKIP23-like protein | LC | chr3:23206024... 51 3e-07
Medtr5g038230.1 | ubiquitin-protein ligase | LC | chr5:16723481-... 51 3e-07
Medtr5g038260.1 | ubiquitin-protein ligase | LC | chr5:16741864-... 50 5e-07
Medtr3g029650.1 | F-box SKIP23-like protein | LC | chr3:9344812-... 49 8e-07
Medtr2g047180.1 | F-box SKIP23-like protein | LC | chr2:20693466... 49 9e-07
Medtr6g018390.4 | F-box SKIP23-like protein | LC | chr6:7043251-... 49 1e-06
Medtr6g018390.2 | F-box SKIP23-like protein | LC | chr6:7043148-... 49 1e-06
Medtr6g018390.3 | F-box SKIP23-like protein | LC | chr6:7042761-... 49 1e-06
Medtr6g018390.1 | F-box SKIP23-like protein | LC | chr6:7043347-... 49 1e-06
Medtr4g022880.1 | F-box SKIP23-like protein | LC | chr4:7689027-... 49 1e-06
Medtr6g027100.1 | TIR domain protein | LC | chr6:9171789-9169385... 49 1e-06
Medtr3g091990.1 | F-box SKIP23-like protein | LC | chr3:41981844... 49 2e-06
Medtr6g027040.1 | F-box protein | LC | chr6:9158639-9159787 | 20... 49 2e-06
Medtr3g030560.1 | F-box SKIP28-like protein | HC | chr3:9688361-... 49 2e-06
Medtr3g029800.1 | F-box SKIP23-like protein | LC | chr3:9396174-... 47 5e-06
Medtr1g007260.1 | F-box protein | LC | chr1:250502-251671 | 2013... 46 8e-06
>Medtr3g114990.1 | ubiquitin-protein ligase | HC |
chr3:53705316-53703014 | 20130731
Length = 410
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 89/138 (64%), Gaps = 13/138 (9%)
Query: 1 MFSDNDLLVVTRALNKDAGGEENQ---VCRTVRFEVFKMDWKESKWDKIETLGDKVLFVG 57
+FS D+L+V R L +D E N V RTV F VFKMDW W++IE LGDK LFVG
Sbjct: 273 VFSGEDMLLVNRVLEEDFSDEPNYDMLVYRTVGFTVFKMDWNAMAWNRIEALGDKALFVG 332
Query: 58 GNNSHSFSASDFGGCFEADCIYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEP-LPCFPQ 116
N+S FSA DF GC DCIYFT Y E NHDD+CGKHD GIFRL D I+P LP + +
Sbjct: 333 VNSSMCFSAGDFVGCC-GDCIYFTDDYSEDNHDDACGKHDFGIFRLYDGIIDPLLPSYSR 391
Query: 117 NS--------PIWITPNP 126
NS PIWI+PNP
Sbjct: 392 NSYSRLECPLPIWISPNP 409
>Medtr3g114990.3 | ubiquitin-protein ligase | HC |
chr3:53705316-53701730 | 20130731
Length = 410
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 89/138 (64%), Gaps = 13/138 (9%)
Query: 1 MFSDNDLLVVTRALNKDAGGEENQ---VCRTVRFEVFKMDWKESKWDKIETLGDKVLFVG 57
+FS D+L+V R L +D E N V RTV F VFKMDW W++IE LGDK LFVG
Sbjct: 273 VFSGEDMLLVNRVLEEDFSDEPNYDMLVYRTVGFTVFKMDWNAMAWNRIEALGDKALFVG 332
Query: 58 GNNSHSFSASDFGGCFEADCIYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEP-LPCFPQ 116
N+S FSA DF GC DCIYFT Y E NHDD+CGKHD GIFRL D I+P LP + +
Sbjct: 333 VNSSMCFSAGDFVGCC-GDCIYFTDDYSEDNHDDACGKHDFGIFRLYDGIIDPLLPSYSR 391
Query: 117 NS--------PIWITPNP 126
NS PIWI+PNP
Sbjct: 392 NSYSRLECPLPIWISPNP 409
>Medtr3g114990.2 | ubiquitin-protein ligase | HC |
chr3:53705316-53701195 | 20130731
Length = 410
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 89/138 (64%), Gaps = 13/138 (9%)
Query: 1 MFSDNDLLVVTRALNKDAGGEENQ---VCRTVRFEVFKMDWKESKWDKIETLGDKVLFVG 57
+FS D+L+V R L +D E N V RTV F VFKMDW W++IE LGDK LFVG
Sbjct: 273 VFSGEDMLLVNRVLEEDFSDEPNYDMLVYRTVGFTVFKMDWNAMAWNRIEALGDKALFVG 332
Query: 58 GNNSHSFSASDFGGCFEADCIYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEP-LPCFPQ 116
N+S FSA DF GC DCIYFT Y E NHDD+CGKHD GIFRL D I+P LP + +
Sbjct: 333 VNSSMCFSAGDFVGCC-GDCIYFTDDYSEDNHDDACGKHDFGIFRLYDGIIDPLLPSYSR 391
Query: 117 NS--------PIWITPNP 126
NS PIWI+PNP
Sbjct: 392 NSYSRLECPLPIWISPNP 409
>Medtr3g114970.1 | ubiquitin-protein ligase | HC |
chr3:53695038-53697439 | 20130731
Length = 354
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 16/133 (12%)
Query: 1 MFSDNDLLVVTRALNKDAGGEENQV---CRTVRFEVFKMDWKESKWDKIETLGDKVLFVG 57
+FS ++L++ R ++ + + TV+F ++KM+W KW++I+TLG+ LF+G
Sbjct: 231 VFSGEEMLLIQRCCTEEYEPRDFEPYPDMSTVKFWIYKMNWNMLKWEEIQTLGEHSLFIG 290
Query: 58 GNNSHSFSASDFGGCFEADCIYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEPLPCFPQN 117
N S SFSA+DF GC +CIYFT DD GKHD GI+ L D+SIE LPC PQN
Sbjct: 291 KNYSLSFSAADFAGCC-PNCIYFT--------DDIGGKHDHGIYSLSDESIELLPCDPQN 341
Query: 118 S----PIWITPNP 126
P+W+TPNP
Sbjct: 342 CGFGYPVWVTPNP 354
>Medtr3g114970.2 | ubiquitin-protein ligase | HC |
chr3:53695038-53697439 | 20130731
Length = 354
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 16/133 (12%)
Query: 1 MFSDNDLLVVTRALNKDAGGEENQV---CRTVRFEVFKMDWKESKWDKIETLGDKVLFVG 57
+FS ++L++ R ++ + + TV+F ++KM+W KW++I+TLG+ LF+G
Sbjct: 231 VFSGEEMLLIQRCCTEEYEPRDFEPYPDMSTVKFWIYKMNWNMLKWEEIQTLGEHSLFIG 290
Query: 58 GNNSHSFSASDFGGCFEADCIYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEPLPCFPQN 117
N S SFSA+DF GC +CIYFT DD GKHD GI+ L D+SIE LPC PQN
Sbjct: 291 KNYSLSFSAADFAGCC-PNCIYFT--------DDIGGKHDHGIYSLSDESIELLPCDPQN 341
Query: 118 S----PIWITPNP 126
P+W+TPNP
Sbjct: 342 CGFGYPVWVTPNP 354
>Medtr3g030050.1 | F-box SKIP23-like protein | HC |
chr3:9484905-9489315 | 20130731
Length = 423
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 27 RTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCF-EADCIYFTGHYP 85
R VRF+VF++D KE KW ++ LGD VLF+G + S SASD C +C+ F +
Sbjct: 323 RAVRFDVFRLDEKEKKWVEVRNLGDMVLFLGEECAFSASASDL--CIGNGNCVIFRDYVL 380
Query: 86 ESNHDDSCGKHDLGIFRLKDKSIEPLPCFPQNSPIWITP 124
H G +F L + I PL FP S ++ P
Sbjct: 381 NDFHSTEVGNR---VFHLDQRRISPLSDFPIYSKLFWPP 416
>Medtr3g029640.1 | F-box SKIP23-like protein | LC |
chr3:9337600-9334357 | 20130731
Length = 368
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 18/127 (14%)
Query: 3 SDNDLLVVTRALNKDAGGEENQVCRTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSH 62
S+ +LL+V R N C V +VF++D KE +W K+ LGDKVLF+G S
Sbjct: 250 SEFELLLVDRYEN---------YCVPVWIDVFRLDEKEKRWVKLTNLGDKVLFLGNGCSF 300
Query: 63 SFSASDFGGCFEADCIYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEPLPCFPQN----- 117
S SAS+ G +C+ ++ Y S H + K + +F L PL +P+
Sbjct: 301 SASASELGFA-NGNCVIYSTSY--SFHGLNIRKCKMSVFHLDQGQASPLSDYPEYFKLFW 357
Query: 118 -SPIWIT 123
P W+T
Sbjct: 358 PPPAWVT 364
>Medtr3g029920.1 | F-box protein | LC | chr3:9433853-9432699 |
20130731
Length = 384
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 32 EVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPESNHDD 91
+VF++D KE KW KI+ LGD+VLF+G S S SASD E +CI F +H D
Sbjct: 282 DVFRLDEKERKWVKIKNLGDRVLFIGLEYSFSASASDLCVS-EGNCIIFIDDVFFYDHTD 340
Query: 92 SCGKHDLGIFRL-KDKSIEPLPCFPQ 116
+ +H + IF + +D + PL +P+
Sbjct: 341 TDTEHIMTIFFMGQDGQLWPLSDYPE 366
>Medtr3g029620.1 | F-box SKIP23-like protein | LC |
chr3:9330826-9328864 | 20130731
Length = 377
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 3 SDNDLLVVTRALNKDAGGEENQVCRTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSH 62
S+ +LL+V R N V +VF++D KE +W K+ LGDKVLF+G S
Sbjct: 259 SEFELLLVDRYENYRV---------PVWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSF 309
Query: 63 SFSASDFGGCFEADCIYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEPLPCFPQ 116
S SAS+ G +C+ ++ Y HD + K + +F L PL +P+
Sbjct: 310 SASASELGFA-NGNCVIYSKSY--GFHDLNIRKCKMSVFHLDQGQASPLSDYPE 360
>Medtr3g037710.1 | F-box SKIP23-like protein | LC |
chr3:13864923-13860143 | 20130731
Length = 275
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 27 RTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCF-EADCIYFTGHYP 85
R VRF+VF++D +E KW ++ LGD+VLF+G + + S SA D C +C+ F
Sbjct: 165 RDVRFDVFRLDEREKKWVEVRNLGDRVLFLGEDCAFSASALDL--CIGNGNCVIFRDDVF 222
Query: 86 ESNHDDSCGKHDLGIFRLKDKSIEP 110
+ H + G +G+F L + I P
Sbjct: 223 HNFHSNEVG---IGVFHLDQRRISP 244
>Medtr5g082780.1 | DUF295 family protein | LC |
chr5:35629399-35628695 | 20130731
Length = 234
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 31 FEVFKMDW-----KESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYP 85
F+V+K+++ K + K+E+LGD VLF+G +S S SAS F GC + D IY+T
Sbjct: 154 FQVYKLEFDAQTRKFKQIKKLESLGDNVLFLGDTDSISVSASYFSGCLKKDSIYYTESIN 213
Query: 86 ESNHD-DSCGKHDLGIF 101
+ D +CG +GI+
Sbjct: 214 ANKLDCVTCGPFHIGIY 230
>Medtr3g092000.1 | F-box SKIP23-like protein | LC |
chr3:41986657-41985410 | 20130731
Length = 415
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 29 VRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPESN 88
++ +VF++D KE KW K+ +LGD+VLF+G S S SASD + +C+ F+
Sbjct: 303 LKLDVFRLDEKEKKWVKLASLGDRVLFLGNGCSFSASASDL-SVVKGNCVIFSDDAFYDF 361
Query: 89 HDDSCGKHDLGIFRLKDKSIEPLPCFPQNS------PIWIT 123
CG + +F L + PL +P+ S P WI
Sbjct: 362 DQMLCG---MCVFHLDQCWVSPLSDYPEYSTSFWPPPEWIV 399
>Medtr1g064570.1 | ubiquitin-protein ligase | LC |
chr1:28409366-28408164 | 20130731
Length = 400
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 26 CRTVRFEVFKM--DWKESKWD---KIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYF 80
C T RFEV+K+ D K K ++++LGD VLF+G ++S S SAS F + D IY+
Sbjct: 286 CGTERFEVYKLELDLKSGKLIHMLRLDSLGDNVLFLGDSDSISMSASYFANYLQKDSIYY 345
Query: 81 T-GHYPESNHDDSCGKHDLGIFRLKD 105
T Y E G D+ IF +KD
Sbjct: 346 TDDFYEEDPISYPNGPFDMKIFNVKD 371
>Medtr3g058460.1 | F-box SKIP23-like protein | LC |
chr3:23206024-23202653 | 20130731
Length = 378
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 29 VRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPESN 88
VRF+VF +D KE KW ++ LGD+VLF G + S SAS+ G +C+ F
Sbjct: 281 VRFQVFNLDEKEKKWVEVRNLGDRVLFWGEDGVFSASASEL-GVGNGNCVIF-------- 331
Query: 89 HDDSC----GKHDLGIFRLKDKSIEPLPCFPQNSPI-WITP 124
DD C + ++ L+ I PL FP S + W P
Sbjct: 332 RDDPCPYSNNRLADSVYCLQTDKISPLSDFPGYSKLFWPLP 372
>Medtr5g038230.1 | ubiquitin-protein ligase | LC |
chr5:16723481-16724618 | 20130731
Length = 355
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 4 DNDLLVVTRALNKDAGGEENQVCRTVRFEVFKMDW-----KESKWDKIETLGDKVLFVGG 58
D +L +V R +N+ +N T VFK++ K K+E+LGD VLFVG
Sbjct: 223 DGELWMVRRFINR----VKNINKGTNSLHVFKLELNDKGDKLMHLSKLESLGDNVLFVGD 278
Query: 59 NNSHSFSASDFGGCFEADCIYFT-GHYPESNHDDSCGKHDLGIFRLKDKSIE---PLPCF 114
+S S S S F + D IY++ +Y E G D+GI+ +K S P +
Sbjct: 279 GDSMSVSTSYFSSYLQKDSIYYSDNYYNEVPVPYPRGPFDMGIYNIKHGSFGVHCPYKSY 338
Query: 115 PQN--SPIWITPNPF 127
+ PIW+ P PF
Sbjct: 339 FKGMAPPIWVVP-PF 352
>Medtr5g038260.1 | ubiquitin-protein ligase | LC |
chr5:16741864-16743015 | 20130731
Length = 383
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 4 DNDLLVVTRALNKDAGGEENQVCRTVRFEVFKMDW-----KESKWDKIETLGDKVLFVGG 58
D +L +V R +N+ + T VFK++ K K+E+LGD VLFVG
Sbjct: 251 DGELWMVRRFINRVKNINKG----TNSLHVFKLELNDKGDKLMHLSKLESLGDNVLFVGD 306
Query: 59 NNSHSFSASDFGGCFEADCIYFT-GHYPESNHDDSCGKHDLGIFRLKDKSIE---PLPCF 114
+S S S S F + D IY++ +Y E G D+GI+ +K S P +
Sbjct: 307 GDSMSVSTSYFSSYLQKDSIYYSDNYYNEVPVPYPRGPFDMGIYNIKHGSFGVHCPYKSY 366
Query: 115 PQN--SPIWITPNPF 127
+ PIW+ P PF
Sbjct: 367 FKGMAPPIWVVP-PF 380
>Medtr3g029650.1 | F-box SKIP23-like protein | LC |
chr3:9344812-9340507 | 20130731
Length = 752
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 28 TVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCF-EADCIYFT 81
+R +VFK+D E KW K+ TLGD VLF+G S S SASD C +C+ FT
Sbjct: 263 AIRVDVFKLDEMEKKWVKLTTLGDSVLFLGNECSFSASASDL--CVPRGNCVVFT 315
>Medtr2g047180.1 | F-box SKIP23-like protein | LC |
chr2:20693466-20694584 | 20130731
Length = 372
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 28 TVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPES 87
+R VF++D KE KW + +LGD+VLF+G S S SASD + +C+ F +
Sbjct: 276 ALRIYVFRLDEKEKKWVSLTSLGDRVLFLGNGCSFSASASDLCVA-KGNCVIFIDYMKSG 334
Query: 88 NHDDSCGKHDLGIFRLKDKSIEPLPCFPQ 116
N +F L + PL +P+
Sbjct: 335 N----------CVFHLDQDRLSPLSDYPE 353
>Medtr6g018390.4 | F-box SKIP23-like protein | LC |
chr6:7043251-7040650 | 20130731
Length = 365
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 28 TVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPES 87
+V ++FK++ KE KW K+ +LGD+VLF+G S S SASD + +C+ F+ S
Sbjct: 272 SVWIDLFKLNEKEKKWVKLTSLGDRVLFLGEVCSFSVSASDLCVA-KGNCVIFSYSIICS 330
Query: 88 NHDDSCGKHDLGIFRLKDKSIEPLPCFPQNSPIWITP 124
+ +SC I L PL +P+ S ++ P
Sbjct: 331 SKSESC------ILDLDQGRHSPLSDYPEYSNLFWPP 361
>Medtr6g018390.2 | F-box SKIP23-like protein | LC |
chr6:7043148-7040687 | 20130731
Length = 365
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 28 TVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPES 87
+V ++FK++ KE KW K+ +LGD+VLF+G S S SASD + +C+ F+ S
Sbjct: 272 SVWIDLFKLNEKEKKWVKLTSLGDRVLFLGEVCSFSVSASDLCVA-KGNCVIFSYSIICS 330
Query: 88 NHDDSCGKHDLGIFRLKDKSIEPLPCFPQNSPIWITP 124
+ +SC I L PL +P+ S ++ P
Sbjct: 331 SKSESC------ILDLDQGRHSPLSDYPEYSNLFWPP 361
>Medtr6g018390.3 | F-box SKIP23-like protein | LC |
chr6:7042761-7040687 | 20130731
Length = 365
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 28 TVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPES 87
+V ++FK++ KE KW K+ +LGD+VLF+G S S SASD + +C+ F+ S
Sbjct: 272 SVWIDLFKLNEKEKKWVKLTSLGDRVLFLGEVCSFSVSASDLCVA-KGNCVIFSYSIICS 330
Query: 88 NHDDSCGKHDLGIFRLKDKSIEPLPCFPQNSPIWITP 124
+ +SC I L PL +P+ S ++ P
Sbjct: 331 SKSESC------ILDLDQGRHSPLSDYPEYSNLFWPP 361
>Medtr6g018390.1 | F-box SKIP23-like protein | LC |
chr6:7043347-7040650 | 20130731
Length = 365
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 28 TVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPES 87
+V ++FK++ KE KW K+ +LGD+VLF+G S S SASD + +C+ F+ S
Sbjct: 272 SVWIDLFKLNEKEKKWVKLTSLGDRVLFLGEVCSFSVSASDLCVA-KGNCVIFSYSIICS 330
Query: 88 NHDDSCGKHDLGIFRLKDKSIEPLPCFPQNSPIWITP 124
+ +SC I L PL +P+ S ++ P
Sbjct: 331 SKSESC------ILDLDQGRHSPLSDYPEYSNLFWPP 361
>Medtr4g022880.1 | F-box SKIP23-like protein | LC |
chr4:7689027-7688415 | 20130731
Length = 184
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 4 DNDLLVVTRALNK----DAGGEENQVCRTVRFEVFKMDWKESKWDKIETLGDKVLFVGGN 59
D DLL+V + L+K + GEE VRF+VFK+D K W ++ LGD+VLF+G +
Sbjct: 48 DGDLLLVVQYLSKLYVSNVDGEE-IYNGAVRFKVFKLDEKMKMWVEMRNLGDRVLFLGED 106
Query: 60 NSHSFSASDFGGCFE-ADCIYFTGHYPESNHDDSCGKHDLGI--FRLKDKSIEPLPCFPQ 116
++ AS+ C +C+ F + DLGI F L PL FP
Sbjct: 107 SAFPVLASNL--CIANGNCVIFRDDILRNVR-----PTDLGISFFHLDQCRTLPLSDFPS 159
Query: 117 NSPIWITP 124
+ ++ P
Sbjct: 160 YAKLFWPP 167
>Medtr6g027100.1 | TIR domain protein | LC | chr6:9171789-9169385 |
20130731
Length = 433
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 29 VRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCF-EADCIYFTGHYPE 86
VR ++FK++ KE KW K+ +LGD+VLF+G +SFS S C + +CI F E
Sbjct: 284 VRIDLFKLNEKEKKWVKLTSLGDRVLFLGLGLVYSFSVSASDLCVSQGNCIIFESMSSE 342
>Medtr3g091990.1 | F-box SKIP23-like protein | LC |
chr3:41981844-41980588 | 20130731
Length = 418
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 31 FEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPESNHD 90
+VF++ KE KW K+ +LGD+VLF+G S SAS+ + +CI F G +
Sbjct: 292 LDVFRLAKKEKKWVKLTSLGDRVLFLGNGCSFFASASNL-SVVKGNCIIFVGDAFLPFNK 350
Query: 91 DSCGKHDLGIFRLKDKSIEPLPCFPQ 116
CG + IF L + PL +P+
Sbjct: 351 MLCG---MCIFHLDQGRVSPLSDYPE 373
>Medtr6g027040.1 | F-box protein | LC | chr6:9158639-9159787 |
20130731
Length = 382
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 29 VRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCF-EADCIYFTGHYPE 86
VR ++FK++ KE KW K+ +LGD+VLF+G +SFS S C + +CI F E
Sbjct: 284 VRIDLFKLNEKEKKWVKLTSLGDRVLFLGLGLVYSFSVSASDLCVSKGNCIIFESMSSE 342
>Medtr3g030560.1 | F-box SKIP28-like protein | HC |
chr3:9688361-9684998 | 20130731
Length = 381
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 19 GGEENQVCRTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDF 69
G + + + +RF+VF++D E KW K+ +GD VLFVGG+ S S ASD
Sbjct: 266 GIDTSNADKDIRFDVFRLDENEKKWVKLANIGDIVLFVGGDCSFSAKASDL 316
>Medtr3g029800.1 | F-box SKIP23-like protein | LC |
chr3:9396174-9395092 | 20130731
Length = 360
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 28 TVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPES 87
VR +VF++D K+ KW K+ LGD VLF+ + S S ASD G IY G +
Sbjct: 264 IVRIDVFRLDEKQKKWVKLTNLGDLVLFLESDYSFSACASDLGLGSGNCVIYNNGITLDF 323
Query: 88 NHDDSCGKHDLGIFRLKDKSIEPLPCFPQNSPIWITP 124
N + +F L I PL +P + ++ P
Sbjct: 324 N---------MSVFHLDQGRISPLSDYPDHLKMFGPP 351
>Medtr1g007260.1 | F-box protein | LC | chr1:250502-251671 |
20130731
Length = 389
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 SDNDLLVVTRALNKDAGGEENQVCRTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSH 62
SD+DLL+ + +E+ +R VFK++ KE KW K+ +GD+VLF+G S
Sbjct: 275 SDSDLLLADVYQRRFDAPDEH-----IRINVFKLNEKEKKWVKLANIGDRVLFLGWLCSF 329
Query: 63 SFSASDF 69
S SASD
Sbjct: 330 SVSASDL 336