Miyakogusa Predicted Gene

Lj0g3v0304429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304429.1 Non Characterized Hit- tr|I3SB43|I3SB43_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.77,0,coiled-coil,NULL; Snf7,Snf7; seg,NULL; CHARGED
MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING P,CUFF.20481.1
         (224 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g041190.1 | charged multivesicular body protein | HC | chr...   313   8e-86
Medtr8g019700.1 | charged multivesicular body protein | HC | chr...   313   1e-85
Medtr7g097170.1 | charged multivesicular body protein | HC | chr...   129   2e-30
Medtr1g069715.1 | cytochrome P450 family protein | LC | chr1:303...   120   1e-27
Medtr2g047875.1 | charged multivesicular body protein | HC | chr...   119   2e-27
Medtr4g057565.1 | vacuolar sorting-associated-like protein | HC ...    64   1e-10
Medtr2g100420.1 | charged multivesicular body protein | HC | chr...    49   3e-06

>Medtr2g041190.1 | charged multivesicular body protein | HC |
           chr2:18065645-18070228 | 20130731
          Length = 223

 Score =  313 bits (802), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 165/224 (73%), Positives = 175/224 (78%), Gaps = 1/224 (0%)

Query: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVR 60
           MSF+FG RKTPAELLRENKRMLDKSIREI+RERQGLQ QEKKLI EIKK+AKQGQMGAVR
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVR 60

Query: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLP 120
           VMAKDL+RTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNR++NLP
Sbjct: 61  VMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 SLPKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSELL 180
           +L KIMQ+FERQNEKMEL  EVM                    VNQVLDEIGIDIN EL+
Sbjct: 121 NLQKIMQDFERQNEKMELTMEVMGDAIDDALEGDEEEEETDELVNQVLDEIGIDINQELV 180

Query: 181 HXXXXXXXXXXXXXXXXXQAEPTGNDDSGIDDDLQARLDNLRKM 224
           +                 QAE    DDSGID DLQARLDNLRKM
Sbjct: 181 N-APSSAVAAPAAKTKVPQAETAATDDSGIDSDLQARLDNLRKM 223


>Medtr8g019700.1 | charged multivesicular body protein | HC |
           chr8:7006345-7009232 | 20130731
          Length = 224

 Score =  313 bits (801), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 177/224 (79%), Positives = 184/224 (82%)

Query: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVR 60
           MSFLFGSRKTPAELLRENKRMLDKSIREI+RERQGLQ+QEKKLI EIKKNAKQGQMGAVR
Sbjct: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIGEIKKNAKQGQMGAVR 60

Query: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLP 120
           VMAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMG+AMKGVTKAMGQMNR++NLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGDAMKGVTKAMGQMNRQMNLP 120

Query: 121 SLPKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSELL 180
           SL KIMQEFERQNEKMELVSEVM                    VNQVLDEIGIDINSELL
Sbjct: 121 SLQKIMQEFERQNEKMELVSEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINSELL 180

Query: 181 HXXXXXXXXXXXXXXXXXQAEPTGNDDSGIDDDLQARLDNLRKM 224
           +                 QAEPTGNDD GIDDDLQARLDNLRKM
Sbjct: 181 NAPASTSAAAPAAKNRIAQAEPTGNDDGGIDDDLQARLDNLRKM 224


>Medtr7g097170.1 | charged multivesicular body protein | HC |
           chr7:39086171-39082366 | 20130731
          Length = 212

 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 116/219 (52%), Gaps = 11/219 (5%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +F  + T  E LRE+KR +  + R I+RE   LQ +EKKL+ EIK+ AK G  GA +V+A
Sbjct: 3   IFTKKPTAKEALRESKREMTNATRGIEREIGSLQLEEKKLVAEIKRTAKTGNEGATKVLA 62

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSLP 123
           + LIR R QI      ++Q++G++   Q + +  ++   MKG TKAM  MN+++      
Sbjct: 63  RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAMNKQMEPAKQA 122

Query: 124 KIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSELLHXX 183
           K+MQEF++Q+ +M++ +E+M                     NQVLDEIGIDI S+L    
Sbjct: 123 KVMQEFQKQSAQMDMTTEMMSDVIDDALDDDEAEEETEELTNQVLDEIGIDIASQL---- 178

Query: 184 XXXXXXXXXXXXXXXQAEPTGNDDSGIDDDLQARLDNLR 222
                           A+ T N  S   DDL+ RL  LR
Sbjct: 179 -------SSAPKGRIAAKNTENVGSSGVDDLEKRLAALR 210


>Medtr1g069715.1 | cytochrome P450 family protein | LC |
           chr1:30367208-30373894 | 20130731
          Length = 677

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 11/219 (5%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +F  +  P E+LRE+KR +  + R I++E   LQ +EKKL+ EIKK AK G   A +++A
Sbjct: 468 IFSKKPKPKEVLRESKREMANATRGIEKEIGALQLEEKKLVAEIKKTAKTGNEAATKILA 527

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSLP 123
           + L+R R QI      ++Q++G++   Q L +  ++   MKG +KAM  MN+++      
Sbjct: 528 RQLVRLRQQIANLQGSRAQMRGIATHTQALYAQSSISAGMKGASKAMEAMNKQMAPTKQA 587

Query: 124 KIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSELLHXX 183
           KI+QEF++Q+ +M++ +E+M                     NQVLDEIG+D+ S+L    
Sbjct: 588 KIIQEFQKQSAQMDITTEMMADAIDDVLDNDEAEDETEDLTNQVLDEIGVDVASQL---- 643

Query: 184 XXXXXXXXXXXXXXXQAEPTGNDDSGIDDDLQARLDNLR 222
                          + + T N  S   DD++ RL  LR
Sbjct: 644 -------SAAPKGSIKTKNTENVSSSEIDDIEKRLAALR 675


>Medtr2g047875.1 | charged multivesicular body protein | HC |
           chr2:20962877-20956118 | 20130731
          Length = 216

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 103/176 (58%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +F  + TP E LR++KR +  + R I+RE   LQ +EKKL+ EIK+ AK G   + +++A
Sbjct: 3   IFKKKTTPKEALRQSKREMSVATRGIEREIASLQMEEKKLVAEIKREAKTGNEASTKILA 62

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSLP 123
           + L+R R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+++      
Sbjct: 63  RQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQA 122

Query: 124 KIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSEL 179
           K++QEF++Q+ ++++  E+M                     NQVLDEIG+DI S+L
Sbjct: 123 KVIQEFQKQSAQLDMTIEMMSESIDETLDKDEAEEESEELTNQVLDEIGVDIASQL 178


>Medtr4g057565.1 | vacuolar sorting-associated-like protein | HC |
           chr4:21106196-21110863 | 20130731
          Length = 227

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 80/141 (56%), Gaps = 2/141 (1%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +   +  P +LLR+ +R L +  R I+R+ + +Q +EK +   IK+ AK+  +G+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKEAAKRNDIGSAKALA 66

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSL 122
            +L+R+R  + + Y+ K+QL  +S+ + +++   + +G   K   + M  +N  +  P +
Sbjct: 67  TELVRSRKTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEM 125

Query: 123 PKIMQEFERQNEKMELVSEVM 143
              MQEF ++  K  ++ E++
Sbjct: 126 AVAMQEFSKEMTKAGVIEEIV 146


>Medtr2g100420.1 | charged multivesicular body protein | HC |
           chr2:43153549-43152380 | 20130731
          Length = 205

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 59/128 (46%)

Query: 52  KQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMG 111
           ++G M   R+ A++ IR R +   + +L S+L  VS R+ T      + ++M  + K++ 
Sbjct: 44  EKGNMDGARIYAENAIRKRTEQMNYLRLSSRLDAVSARLDTQAKMSTISKSMGNIVKSLE 103

Query: 112 QMNRRLNLPSLPKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEI 171
                 NL  + + M +FE+Q   ME+ +E M                    + QV D+ 
Sbjct: 104 SSLATGNLQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDY 163

Query: 172 GIDINSEL 179
           G++++  L
Sbjct: 164 GLEVSVNL 171