Miyakogusa Predicted Gene
- Lj0g3v0304359.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0304359.1 Non Characterized Hit- tr|F6HZN0|F6HZN0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.05,3e-19,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related; mTER,CUFF.20476.1
(203 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g120380.2 | mTERF protein | LC | chr4:49903904-49906039 | ... 181 4e-46
Medtr4g120380.1 | mTERF protein | LC | chr4:49903904-49905982 | ... 181 6e-46
Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 | ... 172 1e-43
Medtr2g436460.1 | mTERF protein | HC | chr2:14169463-14167954 | ... 141 4e-34
Medtr4g119550.1 | mTERF protein | LC | chr4:49553010-49554617 | ... 137 5e-33
Medtr2g437260.1 | mTERF protein | LC | chr2:14574731-14576457 | ... 129 3e-30
Medtr2g436440.1 | mTERF protein | LC | chr2:14162648-14161479 | ... 125 2e-29
Medtr2g437120.1 | mTERF protein | LC | chr2:14519387-14522756 | ... 124 6e-29
Medtr2g437130.1 | transcription termination factor family protei... 124 7e-29
Medtr2g437030.1 | mTERF protein | LC | chr2:14481968-14480275 | ... 118 3e-27
Medtr2g437060.1 | mTERF protein | LC | chr2:14494126-14497351 | ... 118 4e-27
Medtr2g019810.1 | transcription termination factor family protei... 117 6e-27
Medtr2g437040.1 | mTERF protein | LC | chr2:14484903-14486054 | ... 116 1e-26
Medtr2g437080.1 | mTERF protein | LC | chr2:14501679-14504689 | ... 116 1e-26
Medtr2g437020.1 | mTERF protein | LC | chr2:14476696-14472093 | ... 114 9e-26
Medtr2g436400.1 | mTERF protein | LC | chr2:14152329-14153803 | ... 112 2e-25
Medtr2g019840.1 | transcription termination factor family protei... 112 3e-25
Medtr2g076320.1 | mTERF protein | LC | chr2:31968765-31969976 | ... 112 3e-25
Medtr2g437990.1 | mTERF protein | LC | chr2:15012789-15014994 | ... 110 1e-24
Medtr2g437160.1 | mTERF protein | LC | chr2:14533519-14536719 | ... 105 2e-23
Medtr2g437200.1 | mTERF protein | LC | chr2:14551849-14553616 | ... 104 6e-23
Medtr2g437150.1 | mTERF protein | LC | chr2:14528254-14531987 | ... 104 7e-23
Medtr2g437960.2 | mTERF protein | LC | chr2:15007345-15009700 | ... 103 9e-23
Medtr2g437960.1 | mTERF protein | LC | chr2:15007345-15008788 | ... 103 1e-22
Medtr2g437170.1 | mTERF protein | LC | chr2:14542528-14545713 | ... 103 1e-22
Medtr2g436370.1 | mTERF protein | LC | chr2:14144557-14145180 | ... 100 8e-22
Medtr2g437180.1 | mTERF protein | LC | chr2:14546717-14548665 | ... 100 2e-21
Medtr2g437100.1 | mTERF protein | LC | chr2:14511746-14513260 | ... 99 3e-21
Medtr2g438020.1 | mTERF protein | LC | chr2:15022188-15025546 | ... 94 8e-20
Medtr2g437240.1 | mTERF protein | LC | chr2:14566854-14568476 | ... 94 8e-20
Medtr2g438010.1 | mTERF protein | LC | chr2:15019280-15020559 | ... 93 2e-19
Medtr3g450500.1 | transcription termination factor family protei... 81 5e-16
Medtr4g007490.1 | transcription termination factor family protei... 80 1e-15
Medtr2g437940.1 | mTERF protein | LC | chr2:15004630-15003385 | ... 78 6e-15
Medtr4g119570.1 | transcription termination factor family protei... 65 5e-11
Medtr2g437160.2 | mTERF protein | LC | chr2:14533519-14534796 | ... 64 8e-11
Medtr3g085240.1 | mTERF protein | LC | chr3:38525501-38524531 | ... 64 8e-11
Medtr4g049400.1 | mTERF protein | LC | chr4:17357464-17356763 | ... 59 3e-09
Medtr8g081000.1 | transcription termination factor family protei... 53 2e-07
Medtr8g081000.3 | transcription termination factor family protei... 53 2e-07
Medtr8g081000.2 | transcription termination factor family protei... 52 3e-07
Medtr8g080990.1 | transcription termination factor family protei... 50 1e-06
>Medtr4g120380.2 | mTERF protein | LC | chr4:49903904-49906039 |
20130731
Length = 373
Score = 181 bits (459), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 130/196 (66%), Gaps = 11/196 (5%)
Query: 6 CLRAFLRRSIFSQPPPTSKCHHLLQLKPFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFS 65
CLR L + S+ P KC +LL L+P HS +TTS SD+ SFP+SY TN C S
Sbjct: 7 CLRTLLYLNNLSKTP---KCCYLLLLQPHHS----LNTTS-DSDQHSFPVSYLTNNCALS 58
Query: 66 SQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQ 125
Q ALKA+KR+RF+T +KPDSVIAFF HGFS Q +IIR++P +++++P +LPKFQ
Sbjct: 59 PQDALKASKRLRFNTPDKPDSVIAFFKTHGFSDHQIQTIIRKIPLLIVYNPIKTILPKFQ 118
Query: 126 FLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHSIT 182
FLASKG DIV TV+R+P FL SL+ +IIP+FE VR+F PSD KAI + SI
Sbjct: 119 FLASKGASPKDIVATVTRSPNFLCSSLDKNIIPSFELVRSFCPSDHKAITSVIICPSSIC 178
Query: 183 IALMKSKVKLLLHMGV 198
+ K ++ LL GV
Sbjct: 179 DSRFKPNLQFLLDFGV 194
>Medtr4g120380.1 | mTERF protein | LC | chr4:49903904-49905982 |
20130731
Length = 420
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 130/196 (66%), Gaps = 11/196 (5%)
Query: 6 CLRAFLRRSIFSQPPPTSKCHHLLQLKPFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFS 65
CLR L + S+ P KC +LL L+P HS +TTS SD+ SFP+SY TN C S
Sbjct: 7 CLRTLLYLNNLSKTP---KCCYLLLLQPHHS----LNTTS-DSDQHSFPVSYLTNNCALS 58
Query: 66 SQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQ 125
Q ALKA+KR+RF+T +KPDSVIAFF HGFS Q +IIR++P +++++P +LPKFQ
Sbjct: 59 PQDALKASKRLRFNTPDKPDSVIAFFKTHGFSDHQIQTIIRKIPLLIVYNPIKTILPKFQ 118
Query: 126 FLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHSIT 182
FLASKG DIV TV+R+P FL SL+ +IIP+FE VR+F PSD KAI + SI
Sbjct: 119 FLASKGASPKDIVATVTRSPNFLCSSLDKNIIPSFELVRSFCPSDHKAITSVIICPSSIC 178
Query: 183 IALMKSKVKLLLHMGV 198
+ K ++ LL GV
Sbjct: 179 DSRFKPNLQFLLDFGV 194
>Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 |
20130731
Length = 377
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 126/202 (62%), Gaps = 10/202 (4%)
Query: 5 HCLRAFLRRSIFSQPPPTSKCHHLLQLKPFHSPLSLF-STTSHSSDKQSFPLSYFTNTCG 63
HC R R++ + P C +LL L P S +LF ST SD+ SF +SY TN G
Sbjct: 3 HCHRL---RALLNSP---KCCCYLLHLHPRRSLNNLFFSTAISDSDQPSFTVSYLTNNFG 56
Query: 64 FSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPK 123
SSQ ALKA+KR+RF+T +KPD+VIAFF HGFSI Q SIIRR P V + +P +LPK
Sbjct: 57 LSSQDALKASKRLRFNTPDKPDTVIAFFKTHGFSIDQIQSIIRRDPLVFVSNPIKSILPK 116
Query: 124 FQFLASKGFD---IVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHS 180
QFLASKG I+ TV+R P FL SL HIIP FE VR+F PSD+KAI C + +
Sbjct: 117 LQFLASKGVSPEHIIVTVARNPRFLRVSLNKHIIPTFELVRSFCPSDKKAIDCVIAFPAT 176
Query: 181 ITIALMKSKVKLLLHMGVPPSN 202
I+ MK +K LL GV S+
Sbjct: 177 ISDGRMKPNLKFLLDTGVTRSS 198
>Medtr2g436460.1 | mTERF protein | HC | chr2:14169463-14167954 |
20130731
Length = 379
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Query: 43 TTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTH 102
+S +S + F +SY GFSS+ A KA+K V+FDT+ KPDSVIA F N+GFS SQ
Sbjct: 39 NSSTTSQQTQFTVSYLITNFGFSSETASKASKLVQFDTSRKPDSVIAVFRNYGFSDSQIK 98
Query: 103 SIIRRVPEVLLFDPTIRVLPKFQFLASKG---FDIVTTVSRTPYFLLKSLENHIIPAFEF 159
+IIR+ P++L DP RVLPKF+FL SKG DIV V+R+P L SLEN IIP FE
Sbjct: 99 NIIRQAPDILKCDPYKRVLPKFEFLTSKGASNIDIVEIVTRSPRILGSSLENSIIPTFES 158
Query: 160 VRTFSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPPSN 202
VR F PS++K I L H VK+LL GV SN
Sbjct: 159 VRMFLPSNEKVIERILHCKHFFGHFHFIRNVKMLLDDGVIHSN 201
>Medtr4g119550.1 | mTERF protein | LC | chr4:49553010-49554617 |
20130731
Length = 392
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 103/165 (62%), Gaps = 9/165 (5%)
Query: 42 STTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQT 101
STTSHS F +SY N G S Q AL ++++ +KPDSVIA FT HGFS +Q
Sbjct: 47 STTSHS-----FTVSYLINNYGLSPQTALNVSRKLTLSDTQKPDSVIALFTTHGFSNTQI 101
Query: 102 HSIIRRVPEVLL-FDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAF 157
+II+R P +LL DP +LPKFQFL SKG DIV V+ P FLL+SL NHIIP +
Sbjct: 102 RNIIKREPCLLLCLDPNKILLPKFQFLLSKGASTSDIVRIVNANPKFLLRSLHNHIIPTY 161
Query: 158 EFVRTFSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPPSN 202
+F+R F SD++AI C + I+ + +++ VKLLL G SN
Sbjct: 162 DFIRGFLQSDKQAITCINRYASFISDSRVETNVKLLLDNGATHSN 206
>Medtr2g437260.1 | mTERF protein | LC | chr2:14574731-14576457 |
20130731
Length = 393
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 111/194 (57%), Gaps = 13/194 (6%)
Query: 8 RAFLRRSIFSQPPPTSKCHHLLQLKPFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQ 67
+ FL R+ F+ ++ + L+ F TT+ +SD SF +SY + GF+ +
Sbjct: 3 KTFLNRNAFAISKTSTALQYSLR----------FLTTAITSDSNSFAVSYLIHKFGFTPE 52
Query: 68 AALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFL 127
+ALKA+K++ F T++KPDSVI FF NHGF+ S +II+R P +L D R+LPKFQFL
Sbjct: 53 SALKASKQLYFKTSQKPDSVINFFKNHGFNDSDIQNIIKREPWLLSCDTHKRILPKFQFL 112
Query: 128 ASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHSITIA 184
SKG DI+ V P F+ SL+N +IP + + F S+QKA++ + I
Sbjct: 113 LSKGASTSDILRIVVGNPRFMKSSLKNRVIPNYNLITQFLKSNQKAMSSVILCPSLICCN 172
Query: 185 LMKSKVKLLLHMGV 198
M S + L++ GV
Sbjct: 173 YMISNINLMIDNGV 186
>Medtr2g436440.1 | mTERF protein | LC | chr2:14162648-14161479 |
20130731
Length = 389
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
Query: 45 SHSSDKQSFPLSYFTNTCGFSSQAALK--AAKRVRFDTAEKPDSVIAFFTNHGFSISQTH 102
+ +SD SF +SY + GF+ Q A K ++ VRF+TA+KPDSV++FF +HGFS SQ
Sbjct: 40 TKTSDSPSFVVSYLIHNFGFTPQFASKLFSSYNVRFNTAQKPDSVLSFFRSHGFSDSQLC 99
Query: 103 SIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEF 159
+I + P +L DP+ RVLPKFQF SKG DIV VS++P L SLEN ++P +E
Sbjct: 100 HMIIKAPWLLSCDPSKRVLPKFQFFLSKGASNSDIVNLVSKSPLVLAGSLENVLVPTYEL 159
Query: 160 VRTFSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPPSN 202
V F S IAC + SH + + S ++LL+ GV SN
Sbjct: 160 VYRFLQSHHDTIACVIRNSHLFRQSNVSSNIRLLIENGVTDSN 202
>Medtr2g437120.1 | mTERF protein | LC | chr2:14519387-14522756 |
20130731
Length = 418
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 37 PLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAFFTNH 94
P+SL S + SD Q F +SY N GFS ++ALKA ++VRF+T + PDSVI FF NH
Sbjct: 37 PISLRSFCTSESDTQPFAVSYLVNKFGFSHESALKAFNNRQVRFNTPDNPDSVITFFQNH 96
Query: 95 GFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLEN 151
GFS II + P +L P VLPKFQFL SKG DI+ ++ P L SLE
Sbjct: 97 GFSHDNIRIIITKAPWLLSSQPHKMVLPKFQFLLSKGASSSDIIRLLTANPKILQSSLEK 156
Query: 152 HIIPAFEFVRTFSPSDQKAIACALFGSHSITIA---LMKSKVKLLLHMGVPPSN 202
IIP F+ + FS +++ I C + S S I ++++ + L++ GV SN
Sbjct: 157 RIIPLFQLLNRFSKTNKDTIVCLIRNSLSFIIYPYHVLEANINLMIEFGVSDSN 210
>Medtr2g437130.1 | transcription termination factor family protein |
HC | chr2:14524445-14525993 | 20130731
Length = 387
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 26 HHLLQLKPFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPD 85
H + L PF FS +S SF +SY NT GF +AALKA+KR+RF++ +KP+
Sbjct: 23 HKSIPLFPFQ-----FSHNFTTSQSDSFTVSYLINTIGFPREAALKASKRLRFNSPQKPN 77
Query: 86 SVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTP 142
SV FFTN GFS S SII + P +L D +LPKFQF SKG +I ++ P
Sbjct: 78 SVFNFFTNLGFSDSNIRSIIIKQPRLLSSDTHNSILPKFQFFLSKGASSSEIACLLAANP 137
Query: 143 YFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPPS 201
L SLEN IIP FEF + F SD+ I C + S+ L VKLL+ GV S
Sbjct: 138 RILQNSLENRIIPLFEFYKRFFKSDKATICCIIRNLISLPYNLTTVNVKLLIDYGVCDS 196
>Medtr2g437030.1 | mTERF protein | LC | chr2:14481968-14480275 |
20130731
Length = 469
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 100/181 (55%), Gaps = 10/181 (5%)
Query: 27 HLLQLKPFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALK--AAKRVRFDTAEKP 84
H QL F P +++SD SF +SY N GFS Q A K + +V F T +KP
Sbjct: 107 HRYQLPTFSLPFC-----TNTSDSTSFAVSYLINNFGFSPQFASKLCSTYKVCFKTNQKP 161
Query: 85 DSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRT 141
DSV+ FF NHGFS +Q II + P +L P +LPKFQF SKG DI+ V ++
Sbjct: 162 DSVVNFFRNHGFSDTQLCHIIIKEPRLLSCKPCKTLLPKFQFCLSKGASTSDIIKIVCKS 221
Query: 142 PYFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPPS 201
P+FL SLEN I+P +E V F SD IAC++ ++ L+ ++ L+ GV S
Sbjct: 222 PHFLYSSLENQIVPTYELVYRFLQSDNDIIACSIQNPALLSHRLVPHNIQFLIDNGVTHS 281
Query: 202 N 202
N
Sbjct: 282 N 282
>Medtr2g437060.1 | mTERF protein | LC | chr2:14494126-14497351 |
20130731
Length = 395
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 28 LLQLKPFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALK--AAKRVRFDTAEKPD 85
L Q PF P SL T ++SD SF +SY + GF Q+A K + ++ F A+KPD
Sbjct: 35 LFQHYPF--PFSLHLCT-NASDSTSFAVSYLIHKFGFDPQSASKLCSTYKLCFKNAQKPD 91
Query: 86 SVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTP 142
SV+ FF NHGFS SQ H I ++P +L +P+ RVLPKFQF SKG DIV V + P
Sbjct: 92 SVLNFFRNHGFSDSQLHDTIAKMPGLLSCNPSKRVLPKFQFFLSKGASTSDIVNLVCKNP 151
Query: 143 YFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPPSN 202
L SL+N I+P +E V F SD++ +A + S+ +++ + +L+ GV SN
Sbjct: 152 RVLSVSLKNQIVPTYELVYRFLQSDKEILALLNYNSNLFCDPSVQNNITMLIENGVSDSN 211
>Medtr2g019810.1 | transcription termination factor family protein |
LC | chr2:6533149-6534908 | 20130731
Length = 366
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 102/173 (58%), Gaps = 21/173 (12%)
Query: 41 FSTTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQ 100
FS++S SS SF ++Y CGFS + A K +KRV + ++KPDSV+A F ++GFS SQ
Sbjct: 21 FSSSSSSSQNHSFTVNYLIQNCGFSPETASKLSKRVLLNNSQKPDSVLALFKSYGFSNSQ 80
Query: 101 THSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAF 157
S+I+ ++L +DP +LPKF FL SKG D+V ++R P L +SL+N I P +
Sbjct: 81 LSSLIKTRTDILSYDPNKTILPKFNFLLSKGASNSDLVHIITRNPLMLSQSLQNTITPCY 140
Query: 158 EFVRTFSPSDQKAIA------CALFG---SHSITIALMKSKVKLLLHMGVPPS 201
+F++ F SDQ IA C L+ SH+I +LLL GVP S
Sbjct: 141 DFIKRFLLSDQSTIASLKHCSCFLYSKYPSHNI---------QLLLQYGVPES 184
>Medtr2g437040.1 | mTERF protein | LC | chr2:14484903-14486054 |
20130731
Length = 383
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 94/169 (55%), Gaps = 15/169 (8%)
Query: 44 TSHSSDKQSFPLSYFTNTCGFSSQAA--LKAAKRVRFDTAEKPDSVIAFFTNHGFSISQT 101
++++SD F +SY N GFS Q A L + V F TA KPDSV+ FF NHGFS SQ
Sbjct: 33 STNTSDSTFFAVSYLINNFGFSPQFASKLSSTYNVHFKTARKPDSVLNFFRNHGFSDSQI 92
Query: 102 HSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFE 158
++I + P +L DP RVLPKFQF SKG DIV VS+ P FL SL+ I+P +E
Sbjct: 93 RTVIAKEPRLLSCDPLKRVLPKFQFFLSKGASNSDIVNIVSKNPMFLTASLDKKIVPTYE 152
Query: 159 FVRTFSPSDQKAIAC-----ALFGSHSITIALMKSKVKLLLHMGVPPSN 202
V + SD+ +A FG S+ + ++LL+ GV N
Sbjct: 153 LVYKYLQSDKHILALLNCNPTFFGRSSV-----EHNIRLLIQSGVTDIN 196
>Medtr2g437080.1 | mTERF protein | LC | chr2:14501679-14504689 |
20130731
Length = 382
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 106/195 (54%), Gaps = 11/195 (5%)
Query: 13 RSIFSQPPPTSKCHHLLQLKPFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALK- 71
RSIF+ P T + + L P SL T ++SD SF +SY N GF Q A K
Sbjct: 8 RSIFNLKPLTFSPNPITPL-----PFSLHFCT-NTSDSTSFSVSYLINNFGFDPQFASKL 61
Query: 72 -AAKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASK 130
+ ++RF T + PDSV+ FF N+GFS SQ II + P +L DP+ RVLPKFQF SK
Sbjct: 62 CSTYKLRFKTDQNPDSVLKFFRNYGFSNSQLRRIIPKAPWLLSCDPSKRVLPKFQFFLSK 121
Query: 131 GF---DIVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHSITIALMK 187
G DIV +S+ P L SL+N I+P +E V F S + IAC + + L+
Sbjct: 122 GASTSDIVNFMSKNPRILSVSLKNRIVPIYELVYRFLQSHKDTIACVISNPVLFSDHLVA 181
Query: 188 SKVKLLLHMGVPPSN 202
+ LLL G+ SN
Sbjct: 182 HNIALLLENGLSDSN 196
>Medtr2g437020.1 | mTERF protein | LC | chr2:14476696-14472093 |
20130731
Length = 383
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 92/163 (56%), Gaps = 5/163 (3%)
Query: 45 SHSSDKQSFPLSYFTNTCGFSSQAA--LKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTH 102
+++SD SF +SY N GF Q+A L + V F A+KPDSV+ FF N+GFS SQ
Sbjct: 33 TNTSDSTSFAVSYLINNFGFDPQSASKLSSTYNVTFKNAQKPDSVLTFFRNYGFSDSQLR 92
Query: 103 SIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEF 159
I + P +L +P+ RVLPKFQF SKG DIV +++ P L SL+N II A++
Sbjct: 93 HTISKEPWLLSCNPSKRVLPKFQFFLSKGASTSDIVNIITKNPNILKASLDNKIIQAYQL 152
Query: 160 VRTFSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPPSN 202
+ F SD+ I C + A + S ++LL+ GV N
Sbjct: 153 IYRFLQSDKVIIDCVIRNPSFFGDARVVSNIRLLIANGVADLN 195
>Medtr2g436400.1 | mTERF protein | LC | chr2:14152329-14153803 |
20130731
Length = 381
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 45 SHSSDKQSFPLSYFTNTCGFSSQAALK--AAKRVRFDTAEKPDSVIAFFTNHGFSISQTH 102
+++SD S +SY N GF Q+A K + +RF T +KP+S + FF N+GFS SQ
Sbjct: 41 TNTSDSTSLAVSYLINNFGFDPQSASKLCSTYHLRFKTTQKPESFLTFFRNYGFSNSQLR 100
Query: 103 SIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEF 159
+I ++PE+L P+ VLPKFQF S+G DIV V+++P L SL N I+PA+E
Sbjct: 101 HMIAKMPELLTCKPSKTVLPKFQFFLSRGASTSDIVNIVTKSPRVLYVSLNNQIVPAYEL 160
Query: 160 VRTFSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPPSN 202
V F SD++ + + ++ + +++ + +L+ GV SN
Sbjct: 161 VYRFLQSDKEILEKLNYSANLLCDCTVQNNITMLIENGVSDSN 203
>Medtr2g019840.1 | transcription termination factor family protein |
LC | chr2:6541919-6543690 | 20130731
Length = 385
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 21/171 (12%)
Query: 43 TTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTH 102
++S + SF ++Y GFS Q A K +KR++ + ++KPDSV+ F ++GFS SQ
Sbjct: 35 SSSTKQQQHSFTVNYLIQNLGFSPQTASKLSKRLQLNNSQKPDSVLLLFKSYGFSNSQLS 94
Query: 103 SIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEF 159
++I+ P +L +P +LPKF FL SKG D+V +S+ P+ L +SLEN I P + F
Sbjct: 95 TLIKTYPNLLSVNPNKTILPKFNFLLSKGASNSDLVYIISKNPFILCRSLENTITPCYHF 154
Query: 160 VRTFSPSDQKAI------ACALFG---SHSITIALMKSKVKLLLHMGVPPS 201
++ F SDQ I AC L+ SH+I + LL GVP S
Sbjct: 155 IKRFLLSDQSIIASLKHCACLLYSKIPSHNI---------QFLLQNGVPES 196
>Medtr2g076320.1 | mTERF protein | LC | chr2:31968765-31969976 |
20130731
Length = 403
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 8/177 (4%)
Query: 33 PFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAF 90
PF S +T+ S Q F +SY N FS+++ALKA K+VRF+T++ PDSVI F
Sbjct: 32 PFSLKCSSITTSQSESITQPFAVSYLINNFDFSTESALKAFNLKQVRFNTSDNPDSVITF 91
Query: 91 FTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLK 147
F NHGFS S I++ P +L P R+LPKFQF S G DIV ++ P+ L
Sbjct: 92 FQNHGFSNSDIRIFIKKAPWLLSSQPHKRLLPKFQFFISNGASLSDIVPLLTANPHILQS 151
Query: 148 SLENHIIPAFEFVRTFSPSDQKAIACALFGSHSITI---ALMKSKVKLLLHMGVPPS 201
SL+ IIP F+ + FS +++ I + S S + L+++ + L++ GV S
Sbjct: 152 SLDKRIIPLFQLLNRFSKTNKDTIVYLIRHSRSFIVYPLNLLEANINLMVDFGVYDS 208
>Medtr2g437990.1 | mTERF protein | LC | chr2:15012789-15014994 |
20130731
Length = 430
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 7/176 (3%)
Query: 33 PFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAF 90
PF S +T+ S Q F +SY N FS+++ALKA ++VRF+T + PDSVI F
Sbjct: 32 PFSLKCSSITTSQSESITQPFAVSYLINNFDFSTESALKAFNLRQVRFNTPDNPDSVINF 91
Query: 91 FTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLK 147
F NHGFS S II++ P +L P R+LPKFQF S G DIV ++ P+ L
Sbjct: 92 FQNHGFSHSDIRIIIKKAPWLLSSQPHKRLLPKFQFFISNGASLSDIVPLLTANPHILQS 151
Query: 148 SLENHIIPAFEFVRTFSPSDQKAIACALFGSHSIT--IALMKSKVKLLLHMGVPPS 201
SL+ IIP F+ + F +++ I + S S + L+++ + L++ GV S
Sbjct: 152 SLDKRIIPLFQLLNRFLKTNKDTIVYLILNSRSFITPLHLLEANINLMVDFGVCDS 207
>Medtr2g437160.1 | mTERF protein | LC | chr2:14533519-14536719 |
20130731
Length = 411
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 43 TTSHSSDKQSFPLSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAFFTNHGFSISQ 100
T + S+ F +SY N GFS ++ALKA K+VRF+T + DSVI FF NHGF S
Sbjct: 55 TATSESNTHPFSVSYLINNFGFSHESALKAFNNKQVRFNTPDNADSVITFFQNHGFPNSN 114
Query: 101 THSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAF 157
II++ P +L P R+LPKFQF S G DIV ++ P L SLE IIP F
Sbjct: 115 IRIIIQKAPWLLSSQPHKRLLPKFQFFLSNGASLSDIVPLLTTNPRILRSSLEKQIIPLF 174
Query: 158 EFVRTFSPSDQKAIACAL--FGSHSITIALMKSKVKLLLHMGVPPS 201
+ + +++ AI C + + + +I L+ + + L+ G+P S
Sbjct: 175 QLLSRCLKTNRDAIICLIKHWTTFTIYYHLIVANINLMTDFGIPHS 220
>Medtr2g437200.1 | mTERF protein | LC | chr2:14551849-14553616 |
20130731
Length = 398
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 45/204 (22%)
Query: 41 FSTTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQ 100
F TT+ +SD SF +SY + GFS + ALKA+K++ F T++KPDSV+ FF NHGF+ S
Sbjct: 22 FLTTTITSDSNSFTVSYLIHKFGFSHEFALKASKQLYFKTSQKPDSVLNFFKNHGFTDSH 81
Query: 101 THSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENH----- 152
++I+R P +L D R+LPKFQFL S G DIV V P FL SL+N+
Sbjct: 82 IRNVIKREPWLLSCDTQKRILPKFQFLLSIGASSSDIVHMVRCNPKFLELSLKNNQIKFE 141
Query: 153 ------------------------------IIPAFEFVRTFSPSDQKAIACALFGSHSIT 182
IIP FE +R F +++ I C + HS
Sbjct: 142 YFLSKGASSSHIISLLTSNPQILQSSLDKRIIPLFELLRMFFKTNKDTIVCLI--RHSKW 199
Query: 183 IA-----LMKSKVKLLLHMGVPPS 201
+A L+ + + L+ GV S
Sbjct: 200 VASYPHHLIVANINLMSDFGVSHS 223
>Medtr2g437150.1 | mTERF protein | LC | chr2:14528254-14531987 |
20130731
Length = 406
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 93/165 (56%), Gaps = 11/165 (6%)
Query: 22 TSKCHHLLQLKPFHSPLSL--FSTTSHSSDKQSFPL--SYFTNTCGFSSQAALKA--AKR 75
TSK ++ L + F P SL F TT+ S+ + P SY N GFS ++ALKA K+
Sbjct: 22 TSKFNNPLFNQHFSFPFSLTRFCTTTSQSESVTHPFAASYLINNFGFSHESALKAFNLKQ 81
Query: 76 VRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFL---ASKGF 132
VRF+TA+KPDSVI FF NHGFS +IRR P +L P R LPKFQF A+
Sbjct: 82 VRFNTADKPDSVITFFQNHGFSHDNIRIMIRRAPWLLSSQPHKRFLPKFQFFLSNAASSS 141
Query: 133 DIVTTVSRTPYFLLKS--LENHIIPAFEFVRTFSPSDQKAIACAL 175
DIV ++ P L S LE IIP FE + F +++ I C +
Sbjct: 142 DIVPLLTTNPRILRSSLDLEKQIIPLFELLSRFLKTNKDIILCLI 186
>Medtr2g437960.2 | mTERF protein | LC | chr2:15007345-15009700 |
20130731
Length = 429
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 53 FPLSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPE 110
F SY + GFS Q+ALKA K+VRF+T EKP+SV+ FF NHGFS IIR+ P
Sbjct: 55 FAASYLIDNFGFSPQSALKAFNNKQVRFNTLEKPNSVLTFFQNHGFSHENIRIIIRKEPW 114
Query: 111 VLLFDPTIRVLPKFQFLASKG---FDIVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSD 167
+L P +LPKF++ SKG DIV+ ++ P L SL IIP FE + F ++
Sbjct: 115 LLSSQPHKMLLPKFEYFLSKGASSADIVSLLTANPTILRSSLGKRIIPLFELLSRFFKTN 174
Query: 168 QKAIACALFGSHSITIA---LMKSKVKLLLHMGVPPS 201
+ I C L S S I+ L+ + + L+ GV S
Sbjct: 175 KDIIVCLLRHSMSFIISPYHLIVANINLITGFGVSDS 211
>Medtr2g437960.1 | mTERF protein | LC | chr2:15007345-15008788 |
20130731
Length = 406
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 53 FPLSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPE 110
F SY + GFS Q+ALKA K+VRF+T EKP+SV+ FF NHGFS IIR+ P
Sbjct: 55 FAASYLIDNFGFSPQSALKAFNNKQVRFNTLEKPNSVLTFFQNHGFSHENIRIIIRKEPW 114
Query: 111 VLLFDPTIRVLPKFQFLASKG---FDIVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSD 167
+L P +LPKF++ SKG DIV+ ++ P L SL IIP FE + F ++
Sbjct: 115 LLSSQPHKMLLPKFEYFLSKGASSADIVSLLTANPTILRSSLGKRIIPLFELLSRFFKTN 174
Query: 168 QKAIACALFGSHSITIA---LMKSKVKLLLHMGVPPS 201
+ I C L S S I+ L+ + + L+ GV S
Sbjct: 175 KDIIVCLLRHSMSFIISPYHLIVANINLITGFGVSDS 211
>Medtr2g437170.1 | mTERF protein | LC | chr2:14542528-14545713 |
20130731
Length = 412
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 34 FHSPLSLFSTTSHSSDKQSFPL--SYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIA 89
F L+ F TT+ S+ + P SY N GFS ++ALKA K+VRF+TA+KPDSVI
Sbjct: 36 FQISLTRFCTTTSQSESVTHPFAASYLINNFGFSHESALKAFNLKQVRFNTADKPDSVIT 95
Query: 90 FFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFL---ASKGFDIVTTVSRTPYFLL 146
FF NHGFS +IRR P +L P R LPKFQF A+ DIV ++ P L
Sbjct: 96 FFQNHGFSHDNIRIMIRRAPWLLSSQPHKRFLPKFQFFLSNAASSSDIVPLLTTNPRILR 155
Query: 147 KS--LENHIIPAFEFVRTFSPSDQKAIACAL 175
S LE IIP FE + F +++ I C +
Sbjct: 156 SSLDLEKQIIPLFELLSRFLKTNKDIILCLI 186
>Medtr2g436370.1 | mTERF protein | LC | chr2:14144557-14145180 |
20130731
Length = 207
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 48 SDKQSFPLSYFTNTCGFSSQAALK--AAKRVRFDTAEKPDSVIAFFTNHGFSISQTHSII 105
SD SF SY + GF Q A K + R+RF++ +KP+SV+ FF N+GFS SQ +I
Sbjct: 43 SDSTSFAASYLIHNFGFDPQFASKLCSTHRLRFNSTQKPESVVTFFRNYGFSDSQLRDLI 102
Query: 106 RRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEFVRT 162
++P +L P VLPKFQF SKG DIV V + P FL SL+ I+ +E V
Sbjct: 103 AKMPGLLSCKPFKTVLPKFQFFLSKGASNSDIVNLVCKNPVFLTASLDKKIVQTYELVCR 162
Query: 163 FSPSDQKAIACALFGSHSITIALMKSKVKLLLHMGVPP 200
F SD++ +A + ++ + +++ + +L+ P
Sbjct: 163 FLQSDKETLALLNYNANLLCDPYVRNNITMLIEKWSVP 200
>Medtr2g437180.1 | mTERF protein | LC | chr2:14546717-14548665 |
20130731
Length = 396
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 108/212 (50%), Gaps = 16/212 (7%)
Query: 1 MLRGHCLRAFLRRSIFSQPPPTSKCHHLLQLKPFHSPLSLF---STTSHSSDKQSFPLSY 57
ML+ L + I + T K ++ L + F P+SL +TT+H F +SY
Sbjct: 1 MLKKLFLSQNVALGIITTKSTTPKFNNSLLHQYFSFPISLTRFCTTTTHP-----FAVSY 55
Query: 58 FTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFD 115
N GFS +ALKA +V F +AE P+SVI FF N FS S IIR+ P +L
Sbjct: 56 LINNFGFSPLSALKAFNNNQVLFKSAENPNSVINFFKNRDFSHSDIRIIIRKAPWLLSLQ 115
Query: 116 PTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSDQKAIA 172
P +LPKF+F SKG DIV+ ++ P L SLE IIP F+ + +F +++ I
Sbjct: 116 PHNIILPKFEFFLSKGATSSDIVSFITENPRILRSSLEKRIIPLFQLLSSFLKTNKDVIL 175
Query: 173 CALFGSHSITIA---LMKSKVKLLLHMGVPPS 201
C L S +T L+ + + L+ GV S
Sbjct: 176 CLLRHSTYVTFNSYHLVAANINLMTDFGVSDS 207
>Medtr2g437100.1 | mTERF protein | LC | chr2:14511746-14513260 |
20130731
Length = 410
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 19/188 (10%)
Query: 7 LRAFLRRSIFSQPPP----TSKCHHLLQLKPFHSPLSL--FSTTSHSSDKQS------FP 54
L+A L++ SQ T+K ++ L + F P SL FSTT+ +S+ S F
Sbjct: 4 LQAILKKRFLSQNVVLDIITAKSNNPLFHQHFSFPFSLTRFSTTTSASESVSESVTHPFA 63
Query: 55 LSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVL 112
SY N GF+ ++ALK+ K VRF+TA+KPDSVI FF NHGFS +IRR P +L
Sbjct: 64 ASYLINNFGFTHESALKSFNYKHVRFNTADKPDSVITFFQNHGFSHDNIRIMIRRAPWLL 123
Query: 113 LFDPTIRVLPKFQFL---ASKGFDIVTTVSRTPYFLLKS--LENHIIPAFEFVRTFSPSD 167
P R LPKFQF A+ DIV ++ P L S LE IIP FE + F ++
Sbjct: 124 SSQPHKRFLPKFQFFLSNAASSSDIVPLLTTNPRILRSSLDLEKQIIPLFELLSRFLKTN 183
Query: 168 QKAIACAL 175
+ I C +
Sbjct: 184 KDIILCLI 191
>Medtr2g438020.1 | mTERF protein | LC | chr2:15022188-15025546 |
20130731
Length = 496
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 53 FPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVL 112
F +SY + GFS ALKA+K + F T++KPDSV+ FF NH F+ S SII+RVP +L
Sbjct: 73 FIVSYLIDKFGFSHGFALKASKELYFKTSQKPDSVLYFFKNHSFTDSDLRSIIKRVPWIL 132
Query: 113 LFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIPAFEF 159
+ +LPKFQFL SKG DIV V P FL SL+NH I FEF
Sbjct: 133 SCNTHKTILPKFQFLLSKGASTSDIVHMVRGNPRFLELSLKNHQIK-FEF 181
>Medtr2g437240.1 | mTERF protein | LC | chr2:14566854-14568476 |
20130731
Length = 417
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 92/189 (48%), Gaps = 41/189 (21%)
Query: 51 QSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPE 110
QSF +SY + GFS + ALKA+K + F T+ KPDSV+ FF N+GF+ S H+II+R P
Sbjct: 32 QSFTVSYLIHKFGFSHEFALKASKPLYFKTSLKPDSVLNFFKNYGFNDSDIHNIIKREPW 91
Query: 111 VLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENH--------------- 152
+L D +LPKFQFL +KG DIV V P F+ SL+NH
Sbjct: 92 LLSCDTHKTILPKFQFLLAKGASQSDIVRMVVVNPKFVKSSLKNHEIMFHFFLSKGASSS 151
Query: 153 --------------------IIPAFEFVRTFSPSDQKAIACALFGSHSITIA---LMKSK 189
IIP FE + F +++ I C + S + ++ L+
Sbjct: 152 EIVSLLTSNPIILHISLEKRIIPLFELLSKFLKTNKDIIICLIRHSTAFSMNSYHLIMDN 211
Query: 190 VKLLLHMGV 198
V L+ GV
Sbjct: 212 VNLMSDFGV 220
>Medtr2g438010.1 | mTERF protein | LC | chr2:15019280-15020559 |
20130731
Length = 423
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 9/151 (5%)
Query: 34 FHSPLSL----FSTTSHSSDKQSFPLSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSV 87
F PLSL +T+ S Q F +SY N FS+++ALKA + VRF+T ++PDSV
Sbjct: 49 FSFPLSLKCSSITTSQSESITQPFAVSYLINNFDFSTESALKAFNLRHVRFNTPDRPDSV 108
Query: 88 IAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFL---ASKGFDIVTTVSRTPYF 144
I F ++GFS S II++ P +L P +LPKFQF AS DI+ ++ P
Sbjct: 109 INFLKSYGFSNSNIRIIIKKAPWLLSSQPHKMLLPKFQFFLSDASYSSDIIPLLTAHPRI 168
Query: 145 LLKSLENHIIPAFEFVRTFSPSDQKAIACAL 175
L SLE IIP FE + + +++ I C +
Sbjct: 169 LQGSLERRIIPFFELLSRYLKTNKDIIVCLI 199
>Medtr3g450500.1 | transcription termination factor family protein |
HC | chr3:17378033-17376559 | 20130731
Length = 375
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 39 SLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSI 98
S FS H +F +S N+C S + ALK R++ P++VI N+GFS
Sbjct: 27 SSFSVEKHHKG-DTFTVSNLVNSCELSPETALKLLNRLKPKNPNAPNAVIQLLRNYGFSD 85
Query: 99 SQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGF---DIVTTVSRTPYFLLKSLENHIIP 155
SQ +++ P VLL +LPK FL S G D+ + R YFL SLE IIP
Sbjct: 86 SQLCIYVKKHPFVLLCKIEKTLLPKLDFLRSIGVSNTDLPKILIRNTYFLTSSLEKSIIP 145
Query: 156 AFEFVRTFSPSDQKAIAC---ALFGSHSITIA 184
+E +R+F +D++ ++ +G+H+ I
Sbjct: 146 RYEVIRSFVRNDKEVVSTLKRGTWGTHNAWIV 177
>Medtr4g007490.1 | transcription termination factor family protein |
LC | chr4:1113860-1115643 | 20130731
Length = 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 12/178 (6%)
Query: 35 HSPLSLFS----TTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSVIAF 90
H+ SLFS T H D +F L N+CG S + ALK + R++ P++VI
Sbjct: 19 HNTFSLFSVVCNTDQHKGD--TFTLLSLINSCGLSPEKALKLSTRLQLINPNGPNAVIQL 76
Query: 91 FTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGFDIVT--TVSRTPYFLLKS 148
F ++GFS SQ S++++ P VLL +LPK +FL S G + + FL S
Sbjct: 77 FRSYGFSDSQLSSLVKKHPFVLLSKSDKTLLPKLKFLQSIGASTIDFPKILIGDKFLTAS 136
Query: 149 LENHIIPAFEFVRTFSPSDQKAIACALFGSHSITIALMKS----KVKLLLHMGVPPSN 202
LE IIP ++ +++ D+K + GS + M + +++L +GVP S+
Sbjct: 137 LEKTIIPRYKILKSLVCDDKKVVLALRRGSWNFYNDSMVNDSVPNIEVLRKLGVPQSS 194
>Medtr2g437940.1 | mTERF protein | LC | chr2:15004630-15003385 |
20130731
Length = 374
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 14 SIFSQPPPTSKCHHLLQLKPFHSPLSL---FSTTSHSSDKQSFPLSYFTNTCGFSSQAAL 70
I + T K ++ L + F P+SL +TT+H F +SY N GFS+++ L
Sbjct: 14 GIITTKSTTPKFNNPLLHQYFSFPISLTRFCTTTTHP-----FAVSYLVNNFGFSTESTL 68
Query: 71 KA--AKRVRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLA 128
KA K+VRF+T + PDSVI FF NHGFS+ II + P +L P +L KFQF
Sbjct: 69 KAFNNKQVRFNTPDNPDSVITFFQNHGFSLDNIRIIITKAPWLLSSQPHKGLLSKFQFFL 128
Query: 129 SKG 131
SKG
Sbjct: 129 SKG 131
>Medtr4g119570.1 | transcription termination factor family protein |
LC | chr4:49559318-49558150 | 20130731
Length = 232
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 133 DIVTTVSRTPYFLLKSLENHIIPAFEFVRTFSPSDQKAIACALFGSHSITIALMKSKVKL 192
DIV ++R+P F+ SL+ HIIPAFE VR+F PSD+KAI + SI+ MK VK
Sbjct: 21 DIVAAITRSPRFVRVSLDKHIIPAFELVRSFCPSDKKAIHSIIACPTSISDPRMKPNVKF 80
Query: 193 LLHMGVPPSN 202
LL G+ S+
Sbjct: 81 LLDFGLTASS 90
>Medtr2g437160.2 | mTERF protein | LC | chr2:14533519-14534796 |
20130731
Length = 320
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 43 TTSHSSDKQSFPLSYFTNTCGFSSQAALKA--AKRVRFDTAEKPDSVIAFFTNHGFSISQ 100
T + S+ F +SY N GFS ++ALKA K+VRF+T + DSVI FF NHGF S
Sbjct: 55 TATSESNTHPFSVSYLINNFGFSHESALKAFNNKQVRFNTPDNADSVITFFQNHGFPNSN 114
Query: 101 THSIIRRVPEVLLFDPTIRVLPKFQFL 127
II++ P +L P R++ FL
Sbjct: 115 IRIIIQKAPWLLSSQPHKRLIRSRPFL 141
>Medtr3g085240.1 | mTERF protein | LC | chr3:38525501-38524531 |
20130731
Length = 255
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 29/127 (22%)
Query: 28 LLQLKPFHSPLSLFSTTSHSSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTAEKPDSV 87
L L PF + F+T + QSF +SY + FS + A+KA++ RF T++KPDSV
Sbjct: 38 LYHLSPFQFSIRFFNT----APSQSFTVSYLIHKFSFSHEFAIKASEPFRFKTSQKPDSV 93
Query: 88 IAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVLPKFQFLASKGFDIVTTVSRTPYFLLK 147
I FF NHGF+ S H + DIV V P F+
Sbjct: 94 INFFKNHGFTYSDIHRVFTS-------------------------DIVRMVVGNPKFVKS 128
Query: 148 SLENHII 154
SL+NH I
Sbjct: 129 SLKNHEI 135
>Medtr4g049400.1 | mTERF protein | LC | chr4:17357464-17356763 |
20130731
Length = 233
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 8 RAFLRRSIFSQPPPTSKCHHLLQLKPFHSPLSL--FSTTSHSSDKQS--FPLSYFTNTCG 63
+ FL +++ Q T+K +H L + F P+SL FSTT+ S+ + F +SY + G
Sbjct: 4 KWFLSQNVV-QGIITAKSNHPLLHQYFSFPISLTRFSTTTSESELVTPPFAVSYLIDNFG 62
Query: 64 FSSQAALKAAKR--VRFDTAEKPDSVIAFFTNHGFSISQTHSIIRRVPEVLLFDPTIRVL 121
F+ + ++ ++ F KP+SVI FF N F+ S I R+ P + +L
Sbjct: 63 FTPEICFQSFQQQTCSFQICRKPNSVINFFKNRDFAHSDIRIINRKAPWFVSLQSHNIIL 122
Query: 122 PKFQFLASKGF---DIVTTVSRTPYFL 145
PKF+F SKG DIV+ V+ P L
Sbjct: 123 PKFEFFLSKGATSSDIVSFVTANPTIL 149
>Medtr8g081000.1 | transcription termination factor family protein |
LC | chr8:34984986-34983259 | 20130731
Length = 391
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 47 SSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTA-EKPDSVIAFFTNHGFSISQTHSII 105
S+++ +F + + ++ +K V T+ EKP SVI FF GFS +Q HSII
Sbjct: 51 SNEETTFLFNLLNSNSKLHKSESIYVSKLVLGITSPEKPLSVINFFKQIGFSQTQIHSII 110
Query: 106 RRVPEVLL--FDPTIRVLPK---FQFLASKGFDIVTTVSRTPYFLLKSLENHIIPAFEFV 160
+ +VL D T++ PK FQ L +G + +S+ P L+ SL ++P+ E +
Sbjct: 111 HQRTQVLFSKVDKTLK--PKVELFQQLGFQGSQLGHFLSKNPNILIASLNKTLVPSVEVI 168
Query: 161 RTFSPSDQ 168
+ F +++
Sbjct: 169 KKFVRNEK 176
>Medtr8g081000.3 | transcription termination factor family protein |
LC | chr8:34984986-34982260 | 20130731
Length = 410
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 47 SSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTA-EKPDSVIAFFTNHGFSISQTHSII 105
S+++ +F + + ++ +K V T+ EKP SVI FF GFS +Q HSII
Sbjct: 51 SNEETTFLFNLLNSNSKLHKSESIYVSKLVLGITSPEKPLSVINFFKQIGFSQTQIHSII 110
Query: 106 RRVPEVLL--FDPTIRVLPK---FQFLASKGFDIVTTVSRTPYFLLKSLENHIIPAFEFV 160
+ +VL D T++ PK FQ L +G + +S+ P L+ SL ++P+ E +
Sbjct: 111 HQRTQVLFSKVDKTLK--PKVELFQQLGFQGSQLGHFLSKNPNILIASLNKTLVPSVEVI 168
Query: 161 RTFSPSDQ 168
+ F +++
Sbjct: 169 KKFVRNEK 176
>Medtr8g081000.2 | transcription termination factor family protein |
LC | chr8:34984986-34982125 | 20130731
Length = 400
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 47 SSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDTA-EKPDSVIAFFTNHGFSISQTHSII 105
S+++ +F + + ++ +K V T+ EKP SVI FF GFS +Q HSII
Sbjct: 51 SNEETTFLFNLLNSNSKLHKSESIYVSKLVLGITSPEKPLSVINFFKQIGFSQTQIHSII 110
Query: 106 RRVPEVLL--FDPTIRVLPK---FQFLASKGFDIVTTVSRTPYFLLKSLENHIIPAFEFV 160
+ +VL D T++ PK FQ L +G + +S+ P L+ SL ++P+ E +
Sbjct: 111 HQRTQVLFSKVDKTLK--PKVELFQQLGFQGSQLGHFLSKNPNILIASLNKTLVPSVEVI 168
Query: 161 RTFSPSDQ 168
+ F +++
Sbjct: 169 KKFVRNEK 176
>Medtr8g080990.1 | transcription termination factor family protein |
LC | chr8:34980913-34978858 | 20130731
Length = 378
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 47 SSDKQSFPLSYFTNTCGFSSQAALKAAKRVRFDT-AEKPDSVIAFFTNHGFSISQTHSII 105
S+++ +F + + ++ +KR T ++P SV+ +F GFS +Q HSII
Sbjct: 38 STEETTFLFNLLNSNSNLPKYQSIYISKRASGATFPQRPLSVLNYFKQVGFSQAQIHSII 97
Query: 106 R-RVPEVLLF---DPTIRVLPKFQFLASKGFD---IVTTVSRTPYFLLKSLENHIIPAFE 158
R R+P LLF D T+R PK +F GF + +S+ P L SL +IP+ E
Sbjct: 98 RQRLP--LLFSDVDKTLR--PKVEFFQQLGFQGSHLRDFISKNPTILTASLNKKLIPSVE 153
Query: 159 FVRTFSPSDQKAI 171
++ + +++ I
Sbjct: 154 AIKKIAQNEKDFI 166