Miyakogusa Predicted Gene

Lj0g3v0304169.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304169.1 tr|A8IMC1|A8IMC1_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14484,55.68,1e-18,Abi,CAAX amino terminal protease;
YHET-RELATED,NULL; ABHYDROLASE DOMAIN-CONTAINING
PROTEIN,NULL,CUFF.20460.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g467540.2 | CAAX amino terminal protease family protein | ...   175   9e-45
Medtr8g467540.1 | CAAX amino terminal protease family protein | ...   175   9e-45
Medtr8g467540.3 | CAAX amino terminal protease family protein | ...   123   4e-29
Medtr8g099085.1 | CAAX amino terminal protease family protein | ...    72   1e-13
Medtr1g099420.1 | CAAX amino terminal protease family protein | ...    64   4e-11
Medtr0096s0020.1 | CAAX protease self-immunity protein | HC | sc...    55   2e-08

>Medtr8g467540.2 | CAAX amino terminal protease family protein | HC
           | chr8:24295728-24287936 | 20130731
          Length = 338

 Score =  175 bits (443), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 108/129 (83%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +SFFN E+ E   R+TD LVRLLP +GSS + TAC++  TG+ APLLEETVFRGF M SL
Sbjct: 201 VSFFNGETPE---RETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFFMTSL 257

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTPVA+++SAAVF+L H TPG FP LFVLG+ LGISYAQTRNLLTPITIHAFWN G
Sbjct: 258 TKWVPTPVAIILSAAVFALAHLTPGEFPQLFVLGSALGISYAQTRNLLTPITIHAFWNSG 317

Query: 120 -LLVLTLLQ 127
            +L+LT+LQ
Sbjct: 318 VILLLTVLQ 326


>Medtr8g467540.1 | CAAX amino terminal protease family protein | HC
           | chr8:24295707-24281408 | 20130731
          Length = 338

 Score =  175 bits (443), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 108/129 (83%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +SFFN E+ E   R+TD LVRLLP +GSS + TAC++  TG+ APLLEETVFRGF M SL
Sbjct: 201 VSFFNGETPE---RETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFFMTSL 257

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTPVA+++SAAVF+L H TPG FP LFVLG+ LGISYAQTRNLLTPITIHAFWN G
Sbjct: 258 TKWVPTPVAIILSAAVFALAHLTPGEFPQLFVLGSALGISYAQTRNLLTPITIHAFWNSG 317

Query: 120 -LLVLTLLQ 127
            +L+LT+LQ
Sbjct: 318 VILLLTVLQ 326


>Medtr8g467540.3 | CAAX amino terminal protease family protein | HC
           | chr8:24295730-24289349 | 20130731
          Length = 293

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/94 (68%), Positives = 76/94 (80%), Gaps = 4/94 (4%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +SFFN E+ E   R+TD LVRLLP +GSS + TAC++  TG+ APLLEETVFRGF M SL
Sbjct: 201 VSFFNGETPE---RETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFFMTSL 257

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLG 93
           TKWVPTPVA+++SAAVF+L H TPG FP LFVLG
Sbjct: 258 TKWVPTPVAIILSAAVFALAHLTPGEFPQLFVLG 291


>Medtr8g099085.1 | CAAX amino terminal protease family protein | HC
           | chr8:41607888-41603432 | 20130731
          Length = 343

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 12/120 (10%)

Query: 8   SQETSTRKTDPLVRLLPVGSSYVRTACVLASTGLLAPLLEETVFRGFVMASLTKWVPTPV 67
           S E S +  DP+  LL    + V + C        AP+ EE VFRGF++ SLTK++P   
Sbjct: 236 SVEQSIKARDPVAMLL---YAIVVSVC--------APVWEEIVFRGFLLPSLTKYMPVWC 284

Query: 68  AVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIGLLVLTLLQ 127
           A+L+S+  F+L HF       L  LG  +G+ + ++RNLL  + +H+ WN G + L L++
Sbjct: 285 AILVSSVAFALAHFNIQRMLPLIFLGMVMGVIFTRSRNLLPSMLLHSLWN-GFVFLDLMK 343


>Medtr1g099420.1 | CAAX amino terminal protease family protein | HC
           | chr1:44897057-44901183 | 20130731
          Length = 342

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 10/110 (9%)

Query: 18  PLVRLLPVGSSYVRTACVLAS----------TGLLAPLLEETVFRGFVMASLTKWVPTPV 67
           P+++  PV  S V  + V               + AP+ EE VFRGF++ SLT+++P   
Sbjct: 224 PVLQYAPVTVSSVEQSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTRYMPVWS 283

Query: 68  AVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWN 117
           AVL+S+  F+  HF       L  LG  +G  + ++RNLL  + +H+ WN
Sbjct: 284 AVLVSSVAFAFAHFNIQRMLPLVFLGMVMGAVFVRSRNLLPSMLLHSLWN 333


>Medtr0096s0020.1 | CAAX protease self-immunity protein | HC |
           scaffold0096:4448-11755 | 20130731
          Length = 475

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 16  TDPLVRLLPVGSSYVRTACVLASTGLLAPLLEETVFRGFVMASLTKWVPTPVAVLISAAV 75
           ++P ++ + + +   R  CV A   ++ PLLEE V+RGF++ SL+  +    AV+IS+ V
Sbjct: 184 SNPTLKEILLHNDISRVCCVTAYC-IVTPLLEEVVYRGFLLTSLSSTMKWQQAVVISSVV 242

Query: 76  FSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIGLLVLT 124
           FS  HF+   F  LF++G    I   +  ++      H   + G  +LT
Sbjct: 243 FSAIHFSSENFVQLFIIGYTPTIHSKKHFDVFNHRHNHHIHDTGSHLLT 291