Miyakogusa Predicted Gene
- Lj0g3v0304089.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0304089.1 Non Characterized Hit- tr|I1JNR8|I1JNR8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,72.81,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.20452.1
(778 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g094550.1 | mediator of RNA polymerase II transcription su... 1092 0.0
Medtr2g105810.1 | mediator of RNA polymerase II transcription su... 1011 0.0
Medtr2g021400.1 | mediator of RNA polymerase II transcription su... 860 0.0
Medtr7g074290.2 | mediator of RNA polymerase II transcription su... 538 e-153
Medtr7g074290.1 | mediator of RNA polymerase II transcription su... 538 e-152
Medtr7g056330.1 | mediator of RNA polymerase II transcription su... 106 8e-23
Medtr8g069995.1 | mediator of RNA polymerase II transcription su... 87 8e-17
Medtr2g021470.1 | mediator of RNA polymerase II transcription su... 53 1e-06
>Medtr7g094550.1 | mediator of RNA polymerase II transcription subunit
33A | HC | chr7:37640277-37651980 | 20130731
Length = 1338
Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/782 (70%), Positives = 622/782 (79%), Gaps = 9/782 (1%)
Query: 1 MSGWASLMKGSQLTPELVNVLVATPACCLAEIEKIYEIAINGSDEEKISAATILCGASLI 60
+ GW+SLMKGS+LTP LV+VL ATPA LAEIEK+YEI I+GSDEEKISAATILCGASL
Sbjct: 554 VDGWSSLMKGSKLTPGLVDVLAATPASSLAEIEKVYEITIDGSDEEKISAATILCGASLA 613
Query: 61 RGWNIQEHAILFITKLLSPIVPPDHSGTESHLISQAPFLNVLLVGISYVACVRIFSLHGL 120
GWNIQEH I+FITKLLSPI P+H+GTE+HLISQA FLNVLLVGIS CV IFSLHGL
Sbjct: 614 SGWNIQEHTIIFITKLLSPICLPNHTGTENHLISQARFLNVLLVGISSADCVHIFSLHGL 673
Query: 121 VPVLAAGLMLITEVFGSCVPDISWTLATGEKLSPREVFSNAFTLLLRFWRFNLPPVEQVR 180
VP+LAAGLM I EVFGSCV D+SWT+ATG KLSP+EVFSNAFTLLLRFWRF+ +EQVR
Sbjct: 674 VPLLAAGLMQICEVFGSCVYDVSWTVATGGKLSPQEVFSNAFTLLLRFWRFDHLSIEQVR 733
Query: 181 RGAATPPFGSLLSPECLLLVRNCKLASFGSSAKDRQKLKRLSKFLSFPIESVYMDSFPKL 240
AATPP G+L SPE LLLVRN ++ASFG S KD KLKRLSK + FP ES+Y+DSFPKL
Sbjct: 734 GNAATPPLGNLFSPENLLLVRNSRVASFGRSTKDSLKLKRLSKIVRFPKESIYIDSFPKL 793
Query: 241 SFWYRQHQECIASTHSSLAPGGPDHQIVDALLSMMSTKVTNGAEPSTPTTLGSNSSP--G 298
+FW+RQHQE IASTHS L PGGP QIVDALL MM KV G EPSTPTTLGS SS G
Sbjct: 794 NFWHRQHQERIASTHSGLMPGGPVQQIVDALLRMMFRKVNVGFEPSTPTTLGSISSSRFG 853
Query: 299 SALDDTLMKLKVPAWDILAAIPFVLDASLTACAHGRLSTCDLATGLKALADFFPASLVTI 358
SALDD L+KLKVPAWDIL A+PFVLDASL ACA+G +ST +LATGLK LADF PASLV I
Sbjct: 854 SALDDALVKLKVPAWDILEAVPFVLDASLNACAYGTVSTRELATGLKRLADFIPASLVAI 913
Query: 359 ASYFSAEVTRGIWKPAFMNGSDWPSPAANLSLVEQQIKNILAATGVDVPSLAVDGDSPPT 418
ASYFSAEVTRGIWKP FMNG+DWPSPAANLSLVEQ IK ILAATGVDVPSLA+D + P T
Sbjct: 914 ASYFSAEVTRGIWKPVFMNGTDWPSPAANLSLVEQHIKKILAATGVDVPSLAIDEEYPAT 973
Query: 419 LPLPLAAFVSLTLTYRLEKATRRFLVLIAPALEALASSCAWPCMPIVASLWIQKAKRWND 478
LPLPLAAFVSL++TY+L+K RFL+LI P L A+AS C WPCMPI+ SLWIQK KRW D
Sbjct: 974 LPLPLAAFVSLSITYKLDKGKGRFLLLIGPTLNAVASVCVWPCMPILTSLWIQKVKRWRD 1033
Query: 479 YFLFSASSTIFHHNRDAVVQLLKCCFTSTLGLDSASVYNNSGVSALLGNGLGGTSPVSPG 538
YFL AS T+FHHN+DAVVQLLK CFTSTLGL S + NN GV ALLG+GL SPV+PG
Sbjct: 1034 YFLLRASGTVFHHNKDAVVQLLKSCFTSTLGLGSTCMNNNGGVGALLGHGLASHSPVAPG 1093
Query: 539 ILYFKVYRYIEDNSFLTEEILSTLMLSVRDIASSECELPKRGVKK-VNKTKHGRKHGLVS 597
ILY +VYR+I D FL + I+S L+LSVRDIASS+ ELPK VKK +NK K+G K G V
Sbjct: 1094 ILYLRVYRFIGDIMFLNKAIMSILLLSVRDIASSD-ELPKGDVKKQLNKIKYGMKRGQV- 1151
Query: 598 SLARSMARVKHAALLGASLVWISGGQKLVQSLIMETLPSWFLTA----QEGGEPGVVVGM 653
SL R MARVK AALLGASLVWISGGQKLVQSLI T+PSWFL+A QE GE GV+V M
Sbjct: 1152 SLVRYMARVKQAALLGASLVWISGGQKLVQSLIRGTVPSWFLSADTLEQEDGETGVLVAM 1211
Query: 654 LRGHVLAFFVMLSGAFAWGIDQCSPPPKRRAKVLGLHLEFLASTLEKNTSLRCHFTTWRT 713
L G+ LA+FVMLS AFAWGID S PP RRAKV+ +HL+FLA T+E+ T+L CH TW+
Sbjct: 1212 LSGYALAYFVMLSVAFAWGIDHSSVPPNRRAKVIAIHLDFLADTMERFTTLSCHHATWQA 1271
Query: 714 YVSGFVSLMVNCAPVWVREVDVIXXXXXXXXXXXXXXXXXXXXXXXXGGIGVMGAAAEMI 773
YVSGFVSL+V C P+W+REVD GGIGVMG AAEMI
Sbjct: 1272 YVSGFVSLIVCCTPMWIREVDAELLKRLSKGLRQLNEDELALRLLEIGGIGVMGTAAEMI 1331
Query: 774 IE 775
IE
Sbjct: 1332 IE 1333
>Medtr2g105810.1 | mediator of RNA polymerase II transcription subunit
33A | HC | chr2:45673309-45664907 | 20130731
Length = 1316
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/786 (66%), Positives = 602/786 (76%), Gaps = 12/786 (1%)
Query: 1 MSGWASLMKGSQLTPELVNVLVATPACCLAEIEKIYEIAINGSDEEKISAATILCGASLI 60
+ W+SLMKGS L P VNVLVATPA LAEIEKI+E AINGSDEEKISAATILCGASL+
Sbjct: 533 LPSWSSLMKGSLLNPPWVNVLVATPASSLAEIEKIFEFAINGSDEEKISAATILCGASLV 592
Query: 61 RGWNIQEHAILFITKLLSPIVPPDHSGTESHLISQAPFLNVLLVGISYVACVRIFSLHGL 120
RGWN+QEH + FI KLLSP VPP ++GTE+HLIS APFLNVLL+GIS V V+IFSLHG
Sbjct: 593 RGWNVQEHVVFFIIKLLSPAVPPKYAGTENHLISYAPFLNVLLIGISSVDSVQIFSLHGA 652
Query: 121 VPVLAAGLMLITEVFGSCVPDISWTLATGEKLSPREVFSNAFTLLLRFWRFNLPPVEQVR 180
VP+LAA LM I E FGSCVP +SWT ATGEKLS VFSNAF LLLR W+FN PPVE V
Sbjct: 653 VPLLAAALMPICEAFGSCVPSVSWTAATGEKLSCHVVFSNAFVLLLRLWQFNHPPVEHVM 712
Query: 181 RGAATPPFGSLLSPECLLLVRNCKLASFGSSAKDRQKLKRLSKFLSFPIESVYMDSFPKL 240
GAATP GS L PE LLLVRN LASFG S +DR K +R SK +SF E V+MDSFPKL
Sbjct: 713 GGAATPALGSQLGPEYLLLVRNSTLASFGKSPRDRIKSRRFSKMISFSTEPVFMDSFPKL 772
Query: 241 SFWYRQHQECIASTHSSLAPGGPDHQIVDALLSMMSTKVTNGAEPSTPTTLGSNSSPGSA 300
+ WY+QHQEC+AST +L PGGP +IVDALLSMM K+ A+ T TT GS++S GS+
Sbjct: 773 NTWYQQHQECLASTRCALVPGGPILRIVDALLSMMCRKINRSAQSLTSTTSGSSNSSGSS 832
Query: 301 LDDTLMKLKVPAWDILAAIPFVLDASLTACAHGRLSTCDLATGLKALADFFPASLVTIAS 360
LDD LMKLKVPAWDIL A PFVLDA+LTACAHGRLS +LATGLK +ADF PASL TI S
Sbjct: 833 LDDALMKLKVPAWDILEAAPFVLDAALTACAHGRLSPRELATGLKDIADFLPASLATIVS 892
Query: 361 YFSAEVTRGIWKPAFMNGSDWPSPAANLSLVEQQIKNILAATGVDVPSLAVDGDSPPTLP 420
Y SAEVTRG+WKPAFMNG+DWPSPAANLS+VEQQIK ILAATGVDVPSLA+DG++P TLP
Sbjct: 893 YLSAEVTRGVWKPAFMNGTDWPSPAANLSIVEQQIKKILAATGVDVPSLAIDGNAPATLP 952
Query: 421 LPLAAFVSLTLTYRLEKATRRFLVLIAPALEALASSCAWPCMPIVASLWIQKAKRWNDYF 480
LPLAAF+SLT+TY+L+K++ RFLVLI P++ L++ C WPCMPIV SLW QK KRW+D+F
Sbjct: 953 LPLAAFLSLTITYKLDKSSERFLVLIGPSMINLSAGCPWPCMPIVGSLWAQKVKRWSDFF 1012
Query: 481 LFSASSTIFHHNRDAVVQLLKCCFTSTLGLDSASVYNNSGVSALLGNG-----LGGTSPV 535
+FSAS T+FHH+RDAVVQLLK CFTSTLGL SA +YNN GV ALLG+G LGG SPV
Sbjct: 1013 VFSASRTVFHHSRDAVVQLLKSCFTSTLGLGSACIYNNGGVGALLGHGFGSHFLGGISPV 1072
Query: 536 SPGILYFKVYRYIEDNSFLTEEILSTLMLSVRDIASSECELPKRGVKKVNKTKHGRKHGL 595
+PGILY +VYR I D FLTEEI+S LMLSVRDIAS LP K TK+G ++G
Sbjct: 1073 APGILYLRVYRSIRDAMFLTEEIVSLLMLSVRDIASG--GLPNGEAHKPKMTKYGMRYGQ 1130
Query: 596 VSSLARSMARVKHAALLGASLVWISGGQKLVQSLIMETLPSWFLTA----QEGGEPGVVV 651
V SLA SM RVKHAALLGAS +WISGG L+QSLI ETLPSWFL+A QE GE GVVV
Sbjct: 1131 V-SLAASMTRVKHAALLGASFLWISGGSSLIQSLITETLPSWFLSAPGLEQEVGESGVVV 1189
Query: 652 GMLRGHVLAFFVMLSGAFAWGIDQCSPPPKRRAKVLGLHLEFLASTLEKNTSLRCHFTTW 711
+LRG+ LA F +LSG FAWGID S KRR K++G+HLEFLA+ L+ SLRC TW
Sbjct: 1190 AILRGYALACFAVLSGTFAWGIDSLSAASKRRPKIIGIHLEFLANALDGKISLRCDCATW 1249
Query: 712 RTYVSGFVSLMVNCAPVWVREVDVIXXXXXXXXXXXXXXXXXXXXXXXXGGIGVMGAAAE 771
R YVSGF+SLMV+C P+W+ E+DV G +MG AE
Sbjct: 1250 RAYVSGFMSLMVSCTPLWIEELDVDMLKRVSKGLRQMNEDGLALQLLEIRGKSLMGEVAE 1309
Query: 772 MIIELE 777
MII+ E
Sbjct: 1310 MIIQNE 1315
>Medtr2g021400.1 | mediator of RNA polymerase II transcription subunit
33A | HC | chr2:7282174-7290385 | 20130731
Length = 1319
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/785 (59%), Positives = 561/785 (71%), Gaps = 19/785 (2%)
Query: 3 GWASLMKGSQLTPELVNVLVATPACCLAEIEKIYEIAINGSDEEKISAATILCGASLIRG 62
GW+S +KG+ LT +VN LV++PA LAE+EKI+EIAI GS++EKISAATILCGASLIRG
Sbjct: 543 GWSSFLKGAALTSGMVNALVSSPATSLAELEKIFEIAIAGSEDEKISAATILCGASLIRG 602
Query: 63 WNIQEHAILFITKLLSPIVPPDHSGTESHLISQAPFLNVLLVGISYVACVRIFSLHGLVP 122
WNIQEH + FI +LLSP VP ++ ++LI+ AP LNVL VGIS + C+++FSLHGLVP
Sbjct: 603 WNIQEHTVHFILRLLSPPVPIENMEGNNYLINYAPILNVLFVGISSIDCIQVFSLHGLVP 662
Query: 123 VLAAGLMLITEVFGSCVPDISWTLATGEKLSPREVFSNAFTLLLRFWRFNLPPVEQVRRG 182
LA LM I EVFGSC+P+ISW L +GE++S VFSN F LLL+ W+FN PP+E
Sbjct: 663 QLACSLMPICEVFGSCMPNISWKLTSGEEISAHAVFSNVFILLLKLWKFNCPPLEH--GI 720
Query: 183 AATPPFGSLLSPECLLLVRNCKLASFGSSAKDRQKLKRLSKF--LSFPIESVYMDSFPKL 240
TP GS L+PE LLLVRN +L S G+ KDR + +RLS+ LS P SV++DSFPKL
Sbjct: 721 GDTPSVGSQLTPEYLLLVRNSQLMSAGNIRKDRNR-RRLSEIASLSSP-NSVFVDSFPKL 778
Query: 241 SFWYRQHQECIASTHSSLAPGGPDHQIVDALLSMMSTKVTNGAEPSTPTTLGSNSSPGSA 300
WYRQHQ CIAST S L G P HQIV+ LL+MM K+ G +P+ T S+S G+
Sbjct: 779 KVWYRQHQACIASTLSGLVHGTPFHQIVEGLLNMMFRKINRGNQPTITTGSSSSSGLGN- 837
Query: 301 LDDTLMKLKVPAWDILAAIPFVLDASLTACAHGRLSTCDLATGLKALADFFPASLVTIAS 360
+D + K+PAWDIL AIPFV+DA+LTAC+HGRLS +LATGLK LADF PASL TI S
Sbjct: 838 -EDASIGPKLPAWDILEAIPFVVDAALTACSHGRLSPRELATGLKDLADFLPASLATIIS 896
Query: 361 YFSAEVTRGIWKPAFMNGSDWPSPAANLSLVEQQIKNILAATGVDVPSLAVDGDSPPTLP 420
YFSAEVTRG+WKPAFMNG+DWPSPAANL VE+QIK ILA TGVDVPSLA SP TLP
Sbjct: 897 YFSAEVTRGVWKPAFMNGTDWPSPAANLQNVEEQIKKILAETGVDVPSLASGDSSPATLP 956
Query: 421 LPLAAFVSLTLTYRLEKATRRFLVLIAPALEALASSCAWPCMPIVASLWIQKAKRWNDYF 480
LPLAAF SLT+TY++++++ RFL L LE LA+ C WPCMPIVASLW QKAKRW+D+
Sbjct: 957 LPLAAFTSLTITYKVDRSSERFLHLAGQTLEGLAAGCPWPCMPIVASLWTQKAKRWSDFL 1016
Query: 481 LFSASSTIFHHNRDAVVQLLKCCFTSTLGLDSASVYNNSGVSALLGNGL-----GGTSPV 535
+FSAS T+F HN DAVVQL+K CFT+TLG+ S+ + ++ GV ALLG+G GG PV
Sbjct: 1017 IFSASRTVFLHNSDAVVQLVKRCFTATLGMSSSPISSSGGVGALLGHGFKSNLCGGICPV 1076
Query: 536 SPGILYFKVYRYIEDNSFLTEEILSTLMLSVRDIASSECELPKRGVKKVNKTKHGRKHGL 595
+PGILY + YR + D FLTEEI+S LM SVR+I LPK+ +KK+ TK G K+G
Sbjct: 1077 APGILYLRAYRSVRDIVFLTEEIVSILMQSVREIVCG--VLPKQRLKKLKLTKDGIKYGQ 1134
Query: 596 VSSLARSMARVKHAALLGASLVWISGGQKLVQSLIMETLPSWFLTAQEGGEP---GVVVG 652
V S+A SM RVK AA LGASLVWISGG LVQ LI ETLPSWF++ Q + +V
Sbjct: 1135 V-SVAASMTRVKLAAALGASLVWISGGLTLVQLLINETLPSWFISVQRSDQEEKSNGMVA 1193
Query: 653 MLRGHVLAFFVMLSGAFAWGIDQCSPPPKRRAKVLGLHLEFLASTLEKNTSLRCHFTTWR 712
ML G+ LA+F +L GAFAWG+D S KRR KVLG H+EFLAS L+ SL C TWR
Sbjct: 1194 MLGGYGLAYFAVLCGAFAWGVDSSSSASKRRPKVLGTHMEFLASALDGKISLGCDPATWR 1253
Query: 713 TYVSGFVSLMVNCAPVWVREVDVIXXXXXXXXXXXXXXXXXXXXXXXXGGIGVMGAAAEM 772
YVSGFVSLMV C P WV EVDV GG+G MGAAAE+
Sbjct: 1254 AYVSGFVSLMVGCIPNWVLEVDVNVLKRLSNGLRQLNEEELALALLGVGGVGTMGAAAEL 1313
Query: 773 IIELE 777
II+ E
Sbjct: 1314 IIDTE 1318
>Medtr7g074290.2 | mediator of RNA polymerase II transcription
subunit 33A | HC | chr7:27762202-27771866 | 20130731
Length = 992
Score = 538 bits (1386), Expect = e-153, Method: Compositional matrix adjust.
Identities = 320/797 (40%), Positives = 464/797 (58%), Gaps = 46/797 (5%)
Query: 2 SGWASLMKGSQLTPELVNVLVATPACCLAEIEKIYEIAINGSDEEKISAATILCGASLIR 61
S W + M+G+ L L+N L ATPA +AEIEK+Y IA++GS+ E+ +AA ILCGASL R
Sbjct: 217 SPWLTFMEGTPLNNSLINALAATPASSIAEIEKLYYIALSGSEVERPTAAKILCGASLSR 276
Query: 62 GWNIQEHAILFITKLLSPIVPPDHSGTESHLISQAPFLNVLLVGISYVACVRIFSLHGLV 121
GW IQEH + ++ KLL+ VP +SGT + ++ +L G S V + I SLHG+V
Sbjct: 277 GWYIQEHVVHYVVKLLACPVPHSNSGTRGLFVDNMSMISAVLRGASSVDTLHILSLHGVV 336
Query: 122 PVLAAGLMLITEVFGSCVPDISWTLATGEKLSPR--EVFSNAFTLLLRFWRFNLPPVEQ- 178
P +AA L+ + E FGS P ++TG++ S FS AF L+R W+F PP++Q
Sbjct: 337 PTVAASLLPLCEAFGSISPT---PISTGDESSTSVYMAFSLAFLFLIRLWKFCRPPLDQC 393
Query: 179 -VRRGAATPPFGSLLSPECLLLVRNCKLASFGSSAKDRQKLKRLSKFLSFPIESVYMDSF 237
G A LLS L NC ++S +D+QK + + F S + VY+DSF
Sbjct: 394 ITEGGIAVGGLEYLLS-----LHNNCVMSS-----QDKQKSNQ-NLFDSASFKPVYIDSF 442
Query: 238 PKLSFWYRQHQECIASTHSSLAPGGPDHQIVDALLSMMSTKVTNGAEPSTPTTLGSNSSP 297
PKL Y Q++ C+AST S ++ G HQ +LSM+ K++ G S+ ++ ++S+
Sbjct: 443 PKLRALYCQYKSCVASTLSGISTGNSIHQTASVILSMIYQKMSKGGISSSNSSSPNSSNA 502
Query: 298 GSAL----DDTLMKLKVPAWDILAAIPFVLDASLTACAHGRLSTCDLATGLKALADFFPA 353
SAL +D L + +PAW++L A+PFVL+A LTAC HGRLS+ DL TGL+ L DF PA
Sbjct: 503 CSALINSGEDALQRPVLPAWEVLEALPFVLEAILTACVHGRLSSRDLTTGLRDLVDFLPA 562
Query: 354 SLVTIASYFSAEVTRGIWKPAFMNGSDWPSPAANLSLVEQQIKNILAATGVDVPSLAVDG 413
S+ I YFS+EVTRG+WK MNG+DWPSPAA L VE +IK IL GV+VP+ + G
Sbjct: 563 SIAAIIDYFSSEVTRGVWKQVPMNGTDWPSPAAVLQSVESEIKAILTHVGVEVPNCS-SG 621
Query: 414 DSPPTLPLPLAAFVSLTLTYRLEKATRRFLVLIAPALEALASSCAWPCMPIVASLWIQKA 473
SP TLPLP+AA VSL++T++L+K+ + ALE AS C WP MP++ SLW QK
Sbjct: 622 GSPVTLPLPMAALVSLSITFKLDKSLEYIHAITGAALENCASGCPWPSMPVIGSLWAQKV 681
Query: 474 KRWNDYFLFSASSTIFHHNRDAVVQLLKCCFTSTLGLDSAS---VYNNSGVSALLGNGL- 529
+RW+++ + S S ++F HN ++V QL++ CFTS LG+ S S + V+ LLG+ +
Sbjct: 682 RRWHNFIVVSGSRSVFRHNNESVAQLVRSCFTSFLGVLSGSNSKLTAECSVNGLLGSSIT 741
Query: 530 --GGTSPVSPGILYFKVYRYIEDNSFLTEEILSTLMLSVRDIASSECELPKRGVKKVNKT 587
G V+PG LY + R I + +L + I+ + ++A G++ + +
Sbjct: 742 APGAFPFVAPGFLYLRSCRDIHNVQYLNDVIVGLVTEYSNELA---------GIRASSGS 792
Query: 588 KHGRKHGLVSSLARSMARVKHAALLGASLVWISGGQKLVQSLIMETLPSWFLTAQE--GG 645
+ + SSL + K A LGASL+ +GG +LVQ L ET+P+W L++++
Sbjct: 793 SRLKSNE--SSLFLAAQSAKEMATLGASLLCSAGGIQLVQELYKETIPTWLLSSRDVKRK 850
Query: 646 EPGVVVGMLRGHVLAFFVMLSGAFAWGIDQCSPPPK--RRAKVLGLHLEFLASTLEKNTS 703
V+ +L G+ +A+ + SG+ WG+ P PK RR +G+HL+FLA +E+ S
Sbjct: 851 NDNVMSYILEGYAIAYLLTFSGSILWGVGTKLPSPKLSRRNHTIGVHLDFLAEVMERKIS 910
Query: 704 LRCHFTTWRTYVSGFVSLMVNCAPVWVREVDVIXXXXXXXXXXXXXXXXXXXXXXXXGGI 763
L C+ TW+TYV V LMV+ AP W++E+ V GG
Sbjct: 911 LSCNPITWKTYVCCLVGLMVSFAPAWLQEMKVDSLRKLAHGLSRWNEHELALSLLQRGGT 970
Query: 764 GVMGAAAEMI--IELEQ 778
MGA AE+I IE E
Sbjct: 971 AAMGALAELINVIEFEH 987
>Medtr7g074290.1 | mediator of RNA polymerase II transcription subunit
33A | HC | chr7:27762202-27771907 | 20130731
Length = 1320
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 320/797 (40%), Positives = 464/797 (58%), Gaps = 46/797 (5%)
Query: 2 SGWASLMKGSQLTPELVNVLVATPACCLAEIEKIYEIAINGSDEEKISAATILCGASLIR 61
S W + M+G+ L L+N L ATPA +AEIEK+Y IA++GS+ E+ +AA ILCGASL R
Sbjct: 545 SPWLTFMEGTPLNNSLINALAATPASSIAEIEKLYYIALSGSEVERPTAAKILCGASLSR 604
Query: 62 GWNIQEHAILFITKLLSPIVPPDHSGTESHLISQAPFLNVLLVGISYVACVRIFSLHGLV 121
GW IQEH + ++ KLL+ VP +SGT + ++ +L G S V + I SLHG+V
Sbjct: 605 GWYIQEHVVHYVVKLLACPVPHSNSGTRGLFVDNMSMISAVLRGASSVDTLHILSLHGVV 664
Query: 122 PVLAAGLMLITEVFGSCVPDISWTLATGEKLSPR--EVFSNAFTLLLRFWRFNLPPVEQ- 178
P +AA L+ + E FGS P ++TG++ S FS AF L+R W+F PP++Q
Sbjct: 665 PTVAASLLPLCEAFGSISPT---PISTGDESSTSVYMAFSLAFLFLIRLWKFCRPPLDQC 721
Query: 179 -VRRGAATPPFGSLLSPECLLLVRNCKLASFGSSAKDRQKLKRLSKFLSFPIESVYMDSF 237
G A LLS L NC ++S +D+QK + + F S + VY+DSF
Sbjct: 722 ITEGGIAVGGLEYLLS-----LHNNCVMSS-----QDKQKSNQ-NLFDSASFKPVYIDSF 770
Query: 238 PKLSFWYRQHQECIASTHSSLAPGGPDHQIVDALLSMMSTKVTNGAEPSTPTTLGSNSSP 297
PKL Y Q++ C+AST S ++ G HQ +LSM+ K++ G S+ ++ ++S+
Sbjct: 771 PKLRALYCQYKSCVASTLSGISTGNSIHQTASVILSMIYQKMSKGGISSSNSSSPNSSNA 830
Query: 298 GSAL----DDTLMKLKVPAWDILAAIPFVLDASLTACAHGRLSTCDLATGLKALADFFPA 353
SAL +D L + +PAW++L A+PFVL+A LTAC HGRLS+ DL TGL+ L DF PA
Sbjct: 831 CSALINSGEDALQRPVLPAWEVLEALPFVLEAILTACVHGRLSSRDLTTGLRDLVDFLPA 890
Query: 354 SLVTIASYFSAEVTRGIWKPAFMNGSDWPSPAANLSLVEQQIKNILAATGVDVPSLAVDG 413
S+ I YFS+EVTRG+WK MNG+DWPSPAA L VE +IK IL GV+VP+ + G
Sbjct: 891 SIAAIIDYFSSEVTRGVWKQVPMNGTDWPSPAAVLQSVESEIKAILTHVGVEVPNCS-SG 949
Query: 414 DSPPTLPLPLAAFVSLTLTYRLEKATRRFLVLIAPALEALASSCAWPCMPIVASLWIQKA 473
SP TLPLP+AA VSL++T++L+K+ + ALE AS C WP MP++ SLW QK
Sbjct: 950 GSPVTLPLPMAALVSLSITFKLDKSLEYIHAITGAALENCASGCPWPSMPVIGSLWAQKV 1009
Query: 474 KRWNDYFLFSASSTIFHHNRDAVVQLLKCCFTSTLGLDSAS---VYNNSGVSALLGNGL- 529
+RW+++ + S S ++F HN ++V QL++ CFTS LG+ S S + V+ LLG+ +
Sbjct: 1010 RRWHNFIVVSGSRSVFRHNNESVAQLVRSCFTSFLGVLSGSNSKLTAECSVNGLLGSSIT 1069
Query: 530 --GGTSPVSPGILYFKVYRYIEDNSFLTEEILSTLMLSVRDIASSECELPKRGVKKVNKT 587
G V+PG LY + R I + +L + I+ + ++A G++ + +
Sbjct: 1070 APGAFPFVAPGFLYLRSCRDIHNVQYLNDVIVGLVTEYSNELA---------GIRASSGS 1120
Query: 588 KHGRKHGLVSSLARSMARVKHAALLGASLVWISGGQKLVQSLIMETLPSWFLTAQE--GG 645
+ + SSL + K A LGASL+ +GG +LVQ L ET+P+W L++++
Sbjct: 1121 SRLKSNE--SSLFLAAQSAKEMATLGASLLCSAGGIQLVQELYKETIPTWLLSSRDVKRK 1178
Query: 646 EPGVVVGMLRGHVLAFFVMLSGAFAWGIDQCSPPPK--RRAKVLGLHLEFLASTLEKNTS 703
V+ +L G+ +A+ + SG+ WG+ P PK RR +G+HL+FLA +E+ S
Sbjct: 1179 NDNVMSYILEGYAIAYLLTFSGSILWGVGTKLPSPKLSRRNHTIGVHLDFLAEVMERKIS 1238
Query: 704 LRCHFTTWRTYVSGFVSLMVNCAPVWVREVDVIXXXXXXXXXXXXXXXXXXXXXXXXGGI 763
L C+ TW+TYV V LMV+ AP W++E+ V GG
Sbjct: 1239 LSCNPITWKTYVCCLVGLMVSFAPAWLQEMKVDSLRKLAHGLSRWNEHELALSLLQRGGT 1298
Query: 764 GVMGAAAEMI--IELEQ 778
MGA AE+I IE E
Sbjct: 1299 AAMGALAELINVIEFEH 1315
>Medtr7g056330.1 | mediator of RNA polymerase II transcription
subunit 33A | HC | chr7:19823945-19827848 | 20130731
Length = 372
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 56/66 (84%)
Query: 1 MSGWASLMKGSQLTPELVNVLVATPACCLAEIEKIYEIAINGSDEEKISAATILCGASLI 60
+ GW+SLMKGS+LTP L + L ATPA LAEIEKIYEIAI GSDEEKISAATI+CGASL
Sbjct: 305 VDGWSSLMKGSKLTPTLADFLAATPASSLAEIEKIYEIAIYGSDEEKISAATIMCGASLA 364
Query: 61 RGWNIQ 66
RGWN Q
Sbjct: 365 RGWNAQ 370
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 26/27 (96%)
Query: 28 CLAEIEKIYEIAINGSDEEKISAATIL 54
CLAEIEKIYEIAI GSDEEKISAATIL
Sbjct: 39 CLAEIEKIYEIAIYGSDEEKISAATIL 65
>Medtr8g069995.1 | mediator of RNA polymerase II transcription
subunit 33B, putative | LC | chr8:29687566-29685887 |
20130731
Length = 134
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Query: 260 PGGPDHQIVDALLSMMSTKVTNGAEPSTPTTLGSNSSPGSA--LDDTLMKLKVPAWDILA 317
PGGP QIVDALL MM KV +EP TP TLGS S S LD+ L+KLKV A DIL
Sbjct: 2 PGGPVQQIVDALLRMMFRKVNVASEPLTPMTLGSIISSSSGSRLDNALVKLKVSALDILE 61
Query: 318 AIPFVLDASLTACAHGRLSTCDLAT 342
+PF+LDASL ACA+GR+ST +A+
Sbjct: 62 GVPFMLDASLNACAYGRVSTQRIAS 86
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 32/49 (65%)
Query: 243 WYRQHQECIASTHSSLAPGGPDHQIVDALLSMMSTKVTNGAEPSTPTTL 291
+ R + IASTHS L PGGP QIVDALL MM KV +EP TP TL
Sbjct: 76 YGRVSTQRIASTHSGLMPGGPVQQIVDALLRMMFRKVNVASEPLTPMTL 124
>Medtr2g021470.1 | mediator of RNA polymerase II transcription
subunit 33A-like protein, putative | LC |
chr2:7306984-7307220 | 20130731
Length = 59
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 242 FWYRQHQECIASTHSSLAPGGPDHQIVDALLSMMSTKVTNG 282
FWYRQHQ CIA T S L G HQIVD LL+MM K+ NG
Sbjct: 6 FWYRQHQACIALTLSGLVHGTHFHQIVDGLLNMMFRKI-NG 45