Miyakogusa Predicted Gene

Lj0g3v0303389.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0303389.2 Non Characterized Hit- tr|C5YBT5|C5YBT5_SORBI
Putative uncharacterized protein Sb06g001200
OS=Sorghu,27.93,4e-18,Transposase_24,Transposase, Ptta/En/Spm, plant;
coiled-coil,NULL; seg,NULL,CUFF.20402.2
         (734 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g092960.1 | Myb/SANT-like DNA-binding domain protein | LC ...    69   1e-11
Medtr8g040975.1 | hypothetical protein | LC | chr8:15422135-1542...    57   9e-08
Medtr5g048720.1 | hypothetical protein | LC | chr5:21302106-2130...    52   2e-06
Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain ...    51   4e-06
Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731          51   4e-06
Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain ...    51   4e-06

>Medtr2g092960.1 | Myb/SANT-like DNA-binding domain protein | LC |
           chr2:39569693-39563388 | 20130731
          Length = 1223

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 25/259 (9%)

Query: 449 DMPQGQRIVVPFDRQM-RACGEAAALLSGACGRISTKPDNIPIYFESWPKVPDSYKKECF 507
           D   GQRI + FD+   ++ GE         G +      I I  E W  V  + K E +
Sbjct: 551 DRADGQRIPIEFDQSTGKSIGENKTKFKSYLGFLGRS--KISILIEDWDSVDANVKDEIW 608

Query: 508 NALKNLFHFQASEVIAKRYCYLTMGRKYRNHKLNLWKLNFNPSYSREQLIEKVPNGIPED 567
             +  ++    S  + K++    +G ++R  K NL     +     +  +E   N + E+
Sbjct: 609 TEILKIWDVPNSGFLRKKWIAY-VGERWRAFKTNLTSRYIHGDLRGQSPLEAY-NFLDEE 666

Query: 568 QWPLFVDYHLKPEYMEMCQKNVEARKKQTIPH---TGGSKLLSRR--QQEMEEEAGHAVG 622
            W  FV   L P + E+ +K   +    T PH    GG +LL  +  Q++++++ G ++G
Sbjct: 667 TWQAFVQMRLDPAFQEIRKKAQMSSAHHTTPHRLSRGGYELLQEKIMQEKLKQKQG-SLG 725

Query: 623 -----------RGELYIATHKKKDGSYVNAEARSIVEKLEEQLGQLVNTSEI--ASNDAL 669
                      R E +    +K  G Y + ++R I EK++  + +    + +     D L
Sbjct: 726 DSVAAPPSPPARHEQWKRARQKPSGDYTSEDSRIIAEKIDSLVEKTAQGTFVPQGRKDIL 785

Query: 670 AKVLG-PDHAGRVRSLGLG 687
           A+ +G P+H+G VR +G G
Sbjct: 786 AEAIGKPEHSGFVRGVGRG 804


>Medtr8g040975.1 | hypothetical protein | LC |
           chr8:15422135-15424182 | 20130731
          Length = 278

 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 618 GHAVGRGELYIATHKKKDGSYVNAEARSIVEKLEEQLGQLVNTSEIASNDALAKVLGPDH 677
           G    RG++Y  +HK   G +VN  AR   E L+ ++    NT     N+A  KV G +H
Sbjct: 24  GREYSRGDMYAVSHKDAKGKFVNEYARQKAELLQVEMQ---NTQ--CENEAFFKVFGKEH 78

Query: 678 AGRVRSLGLG 687
           AG VRS+GLG
Sbjct: 79  AGYVRSMGLG 88


>Medtr5g048720.1 | hypothetical protein | LC |
           chr5:21302106-21300391 | 20130731
          Length = 194

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 9/115 (7%)

Query: 614 EEEAGHAVGRGELYIATHKKKDGSYVNAEARSIVEKLEEQLGQLVNTSEIASNDALAKVL 673
           E   G    RG++Y+ +HK   G +VN  A    E L+ ++    NT     N+A  KV 
Sbjct: 20  ELRYGREYSRGDMYVVSHKDAKGKFVNEYASQKAELLQVEMQ---NTQ--CENEAFFKVF 74

Query: 674 GPDHAGRVRSLGLGGLHSVAFASTTTRFSVLGNLSNTDTAEPSQLKEEVDSLRLK 728
             +HAG VRS+GL G+     +S +TR +     SN       +++ E+DSL+ K
Sbjct: 75  EKEHAGYVRSMGL-GITPSRISSPSTRLASSSIESNEKML---KMQAEIDSLKEK 125


>Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr2:16185805-16182137 | 20130731
          Length = 694

 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)

Query: 490 IYFESWPKVPDSYKKECFNALKNLFHFQASEVIAKRYCYLTMGRKYRNHKLNLWKLNFNP 549
           I    W  VPD+ K E + ++   +     +++ K+         Y   +   +K +   
Sbjct: 72  ILISDWNSVPDATKDEIWKSITAKWDMPNDKIVKKKTI------SYAGERWKAFKYSLTS 125

Query: 550 SYSRE-QLIEKVP----NGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQT---IPH-- 599
            Y  + + I+K P    + I ED W  F+    +P ++E   K + A++ Q     PH  
Sbjct: 126 RYLFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLE---KRLNAQQTQAHNKYPHRL 182

Query: 600 -TGGSKLLSRRQQEME-EEAGHAVG-----------RGELYIATHKKKDGSYVNAEARSI 646
             GG +LL ++  E + +E   A G           R E +     K  G Y + + R +
Sbjct: 183 SQGGYELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSGEYTSEDTRVV 242

Query: 647 VEKLEEQL--GQLVNTSEIASNDALAKVLGPD-HAGRVRSLGLG 687
            E ++  +  G + N  E    D L K LG D H GRVR++G G
Sbjct: 243 AETIDSLVSDGFVQNGRE----DILVKALGQDEHPGRVRAVGRG 282


>Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731
          Length = 681

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)

Query: 490 IYFESWPKVPDSYKKECFNALKNLFHFQASEVIAKRYCYLTMGRKYRNHKLNLWKLNFNP 549
           I    W  VPD+ K E + ++   +     +++ K+         Y   +   +K +   
Sbjct: 72  ILISDWNSVPDATKDEIWKSITAKWDMPNDKIVKKKTI------SYAGERWKAFKYSLTS 125

Query: 550 SYSRE-QLIEKVP----NGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQT---IPH-- 599
            Y  + + I+K P    + I ED W  F+    +P ++E   K + A++ Q     PH  
Sbjct: 126 RYLFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLE---KRLNAQQTQAHNKYPHRL 182

Query: 600 -TGGSKLLSRRQQEME-EEAGHAVG-----------RGELYIATHKKKDGSYVNAEARSI 646
             GG +LL ++  E + +E   A G           R E +     K  G Y + + R +
Sbjct: 183 SQGGYELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSGEYTSEDTRVV 242

Query: 647 VEKLEEQL--GQLVNTSEIASNDALAKVLGPD-HAGRVRSLGLG 687
            E ++  +  G + N  E    D L K LG D H GRVR++G G
Sbjct: 243 AETIDSLVSDGFVQNGRE----DILVKALGQDEHPGRVRAVGRG 282


>Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr8:5709180-5705508 | 20130731
          Length = 694

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)

Query: 490 IYFESWPKVPDSYKKECFNALKNLFHFQASEVIAKRYCYLTMGRKYRNHKLNLWKLNFNP 549
           I    W  VPD+ K E + ++   +     +++ K+         Y   +   +K +   
Sbjct: 72  ILISDWNSVPDATKDEIWKSITAKWDMPNDKIVKKKTI------SYAGERWKAFKYSLTS 125

Query: 550 SYSRE-QLIEKVP----NGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQT---IPH-- 599
            Y  + + I+K P    + I ED W  F+    +P ++E   K + A++ Q     PH  
Sbjct: 126 RYLFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLE---KRLNAQQTQAHNKYPHRL 182

Query: 600 -TGGSKLLSRRQQEME-EEAGHAVG-----------RGELYIATHKKKDGSYVNAEARSI 646
             GG +LL ++  E + +E   A G           R E +     K  G Y + + R +
Sbjct: 183 SQGGYELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSGEYTSEDTRVV 242

Query: 647 VEKLEEQL--GQLVNTSEIASNDALAKVLGPD-HAGRVRSLGLG 687
            E ++  +  G + N  E    D L K LG D H GRVR++G G
Sbjct: 243 AETIDSLVSDGFVQNGRE----DILVKALGQDEHPGRVRAVGRG 282