Miyakogusa Predicted Gene
- Lj0g3v0303209.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0303209.1 Non Characterized Hit- tr|G7JYA1|G7JYA1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,25.97,0.00000000003,seg,NULL; coiled-coil,NULL; Cysteine
proteinases,NULL,gene.g23600.t1.1
(484 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g471840.1 | Ulp1 protease family, carboxy-terminal domain ... 142 7e-34
Medtr5g023720.1 | Ulp1 protease family, carboxy-terminal domain ... 135 1e-31
Medtr1g070355.1 | FAR1 DNA-binding domain protein | LC | chr1:31... 111 1e-24
Medtr3g023970.1 | Ulp1 protease family, carboxy-terminal domain ... 100 3e-21
Medtr5g054010.1 | Ulp1 protease family, carboxy-terminal domain ... 73 5e-13
Medtr0268s0040.1 | Ulp1 protease family, carboxy-terminal domain... 70 4e-12
Medtr6g061910.1 | Ulp1 protease family, carboxy-terminal domain ... 70 7e-12
Medtr6g045620.1 | Ulp1 protease family, carboxy-terminal domain ... 63 7e-10
Medtr8g061150.1 | transmembrane protein, putative | LC | chr8:21... 55 2e-07
Medtr4g040020.1 | Ulp1 protease family, carboxy-terminal domain ... 53 6e-07
Medtr8g028665.1 | Ulp1 protease family, carboxy-terminal domain ... 52 2e-06
>Medtr6g471840.1 | Ulp1 protease family, carboxy-terminal domain
protein | LC | chr6:25819311-25816178 | 20130731
Length = 566
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 30/259 (11%)
Query: 248 RPSQDMLLTDDELRLSAYIFQLKGDPSEELLKIGSTIGTRQHFMTLCPDRVIDKKIIELM 307
+ + +M L ELR+ AY+F D + + K+GS TR F + P +I +II +M
Sbjct: 299 KTTANMNLDQVELRICAYVFHDSIDEMDTIFKVGSNEYTRVDFHCMLPGMLISSEIILMM 358
Query: 308 AVKLNWNQHNTDAQPAWILPPRFA-----------------------------IYVPIME 338
+K++W Q N Q W LPP F+ IYVPI +
Sbjct: 359 PLKVSWQQQNNVCQTLWCLPPSFSEDVARGNAIEDLHAYYGKDWLGHFERLRLIYVPIED 418
Query: 339 PNGHWYLMVASMDETVIYLVDCHLNSQQTAARKRSIRTIGKVIGRMMFSAYYPHNYLEGN 398
GHW LMV S+D++ IY +D HL R+++IR IG + +++ Y
Sbjct: 419 SRGHWSLMVISIDDSKIYQLDSHLTVDVREGRRKTIRDIGAALAKLIEIVYDGCMSFCAL 478
Query: 399 FELGTWDIEEARSCEDHSTSTQQSTICTLEWMQMDDVFMSNLLPRVEDKLVRMKAAMKLL 458
+ WDIE A + TS S + +EWM M+ F +NL+ +++ + RM M+LL
Sbjct: 479 PDFQYWDIELATGIPNCGTS-DNSALWVVEWMNMESSFTNNLMGVIDEDVSRMAVTMRLL 537
Query: 459 NGPHNENLEMVVEKAQKFW 477
G HNE +++ A+ +W
Sbjct: 538 TGNHNECNNDLIKNARDYW 556
>Medtr5g023720.1 | Ulp1 protease family, carboxy-terminal domain
protein | LC | chr5:9418774-9416359 | 20130731
Length = 497
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 237 TQPRQSMESNFRPSQDMLLTDDELRLSAYIFQLKGDPSEELLKIGSTIGTRQHFMTLCPD 296
T PR ++ F+P+ +M L+ E+++ AY+F D E L+ + + TR LCP
Sbjct: 224 TLPR-GIKWRFKPTPEMHLSPLEVQVCAYVFHPDQDADEPLMTTHNMVATRADIECLCPG 282
Query: 297 RVIDKKIIELMAVKLNWNQHNTDAQPAWILPPRF-------------------------- 330
+ I ++ +A K W Q N W++PP F
Sbjct: 283 KPIKDVVLSYVAGKTCWVQKNLSHNAVWVMPPTFHEDVFNGATLYELMDNYTRHWMVSFQ 342
Query: 331 ---AIYVPIMEP-NGHWYLMVASMDETVIYLVDCHLNSQQTAARKRSIRTIGKVIGRMMF 386
IY+P+ HWYLMV S+ + +Y +D +L ++ +R+ +I+T+ +V+ +M+
Sbjct: 343 TLKYIYIPVKNILINHWYLMVVSLKDETVYQLDSYLRAEDIESRRATIKTLAEVMSQMVN 402
Query: 387 SAYYPHNYLEGNFELGTWDIEEARSCEDHSTSTQQSTICTLEWMQMDDVFMSNLLPRVED 446
S+Y+ ++ + WDI+EAR + S S + LEW++M+ F N+ + +
Sbjct: 403 SSYFATVFMGCKLDFQNWDIKEARGIPNCGRS-NNSLVWLLEWLEMEHSFNHNVHGTINE 461
Query: 447 KLVRMKAAMKLLNGPHNENLEMVVEKAQKFWES 479
VRM+ M +L G HNE + K+ FWE+
Sbjct: 462 NAVRMRTCMSILLGLHNELRSHLEVKSMTFWET 494
>Medtr1g070355.1 | FAR1 DNA-binding domain protein | LC |
chr1:31110429-31113072 | 20130731
Length = 567
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 33/207 (15%)
Query: 236 KTQPRQSMESNFRPSQDMLLTDDELRLSAYIFQLKGDPSEELLKIGSTIGTRQHFMTLCP 295
K + +E+NF + M L E +S Y+F K D SEEL K+ + IG+R F TLCP
Sbjct: 352 KGSTSKFVETNFVTTSKMKLQPVEEHVSCYVFHSKNDLSEELFKVETLIGSRSEFQTLCP 411
Query: 296 DRVIDKKIIELMAVKLNWNQHNTDAQPAWILPPRFA------------------------ 331
R++ +I+E+M+ K+ W + N D W LPP F
Sbjct: 412 GRIVYTEILEMMSAKVTWIERNVDVPSIWSLPPSFVRDAFRRNTIEELIEKYGKNWMPPI 471
Query: 332 -----IYVPIMEPNGHWYLMVASMDETVIYLVDCHLNSQQTAARKRSIRTIGKVIGR--- 383
IY+PI + G+W+LMVAS+D ++Y +D + R+ I+ + ++I
Sbjct: 472 ENLKHIYLPIYDCVGNWFLMVASIDGQILYHLDPGFEKRNIIPRQDDIKKLWQIISEMVQ 531
Query: 384 -MMFSAYYPHNYLEGNFELGTWDIEEA 409
M+ S ++P ++L + WD+ E+
Sbjct: 532 TMVQSEHFPPHFLCEVQHIDNWDMAES 558
>Medtr3g023970.1 | Ulp1 protease family, carboxy-terminal domain
protein | LC | chr3:7352757-7355689 | 20130731
Length = 551
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 40/255 (15%)
Query: 246 NFRPSQDMLLTDDELRLSAYIFQ------LKGDPSEELLKIGSTIGTRQHFMTLCPDRVI 299
NFRP+ M L E + ++FQ +K DP L+K G T L P R I
Sbjct: 275 NFRPTLSMHLAPIEAQTCGFLFQKSATFKVKYDP---LVKTGEVTATMADLQCLRPPRQI 331
Query: 300 DKKIIELMAVKLNWNQHNTDAQPAWILPPRFA---------------------------- 331
I++L A +L + Q + W LPP F
Sbjct: 332 SPLIMQLNAERLRFEQEENNGDFVWHLPPSFEDDLLAGTKVQEMTAKYCSKWMPPSPNLK 391
Query: 332 -IYVPIMEPNGHWYLMVASMDETVIYLVDCHLNSQQTAARKRSIRTIGKVIGRMMFSAYY 390
IYVP+ +GHWYL++ M+ VIY +D L R+R IR I +I ++ Y
Sbjct: 392 FIYVPLRTIHGHWYLIIVDMEHGVIYHLDSFLTVDFMEVRRRRIRKIADMIHHLVLDPMY 451
Query: 391 PHNYLEGNFELGTWDIEEARSCEDHSTSTQQSTICTLEWMQMDDVF-MSNLLPRVEDKLV 449
++ + + I EAR + S S + L+W + + NL ++ + V
Sbjct: 452 SSSFGNKHIDFKNMSITEARGIPNMGCS-DNSGVWVLDWGESAHCIDLKNLPGKLNENEV 510
Query: 450 RMKAAMKLLNGPHNE 464
RM A KL+ G HNE
Sbjct: 511 RMTTAAKLMLGKHNE 525
>Medtr5g054010.1 | Ulp1 protease family, carboxy-terminal domain
protein | HC | chr5:22266246-22268060 | 20130731
Length = 392
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 33/233 (14%)
Query: 262 LSAYIFQLKGDPS---EELLKIGSTIGTRQHFMTLCPDRVIDKKIIELMAVKLNWNQHNT 318
+ A++FQ + + E L+ S TR L PD I K +I L A ++ +T
Sbjct: 156 VCAFLFQKSSEVNLINETLVLTMSLTTTRSELQCLLPDVHITKLVIALAAARVTCR--HT 213
Query: 319 DAQPAWILPPRFA--------------------------IYVPIMEPNGHWYLMVASMDE 352
Q W LPP FA IY+P+ GHW+LMV +
Sbjct: 214 LRQSVWCLPPSFAFDFEDGLSLPHIRAKYRGDWMAPFAKIYIPLRGAEGHWFLMVVHVPS 273
Query: 353 TVIYLVDCHLNSQQTAARKR-SIRTIGKVIGRMMFSAYYPHNYLEGNFELGTWDIEEARS 411
+ Y +D + + T ++ IR +G ++ R++ Y + + + E ++I
Sbjct: 274 GITYHLDSNCPAGLTEEQQHYKIRRMGLLLHRLVDCDEYSTIFPKKSQEFEKFEIVRPNL 333
Query: 412 CEDHSTSTQQSTICTLEWMQMDDVFMSNLLPRVED-KLVRMKAAMKLLNGPHN 463
D +S++ S + L W+ M+ + R+ D K VR+ A++LL G N
Sbjct: 334 MIDGCSSSENSGVWVLHWLSMEHYYRPENFLRIMDVKSVRLNTAVELLIGDEN 386
>Medtr0268s0040.1 | Ulp1 protease family, carboxy-terminal domain
protein | HC | scaffold0268:9312-12408 | 20130731
Length = 602
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 262 LSAYIFQLKGDPS---EELLKIGSTIGTRQHFMTLCPDRVIDKKIIELMAVKLNWNQHNT 318
+ +++FQ + + E L+ TR L PD I + +I L A ++ +T
Sbjct: 341 VCSFLFQKSTEVNLINETLVLTMGLAATRSELQCLLPDVHITELVIALAAARVTC--RHT 398
Query: 319 DAQPAWILPPRFA-----------------------------IYVPIMEPNGHWYLMVAS 349
Q W LPP FA IY+P+ GHW+LMV
Sbjct: 399 LRQSVWCLPPSFAFDFEDGLSLPHIRAKYRGDWMTPFAKVQFIYIPLRGAEGHWFLMVVH 458
Query: 350 MDETVIYLVDCHLNSQQTAA-RKRSIRTIGKVIGRMMFSAYYPHNYLEGNFELGTWDIEE 408
+ + Y +D + + T R IR +G ++ R++ Y + + + E ++I
Sbjct: 459 VPSGITYHLDSNCPAGLTEEQRHYKIRRMGLLLHRLVDCDEYSTIFPKKSQEFEKFEIVR 518
Query: 409 ARSCEDHSTSTQQSTICTLEWMQMDDVFMSNLLPRVED-KLVRMKAAMKLLNGPHNENLE 467
D +S++ S + L W+ M+ + R+ D K VR+ A +LL G N
Sbjct: 519 PNLMIDDCSSSENSGVWVLHWLSMEHYYRPENFLRIMDVKSVRLNTAAELLIGDENSLRY 578
Query: 468 MVVEKAQKFWESQ 480
V +K +F +++
Sbjct: 579 EVQKKTDEFLKAR 591
>Medtr6g061910.1 | Ulp1 protease family, carboxy-terminal domain
protein | HC | chr6:24032822-24029783 | 20130731
Length = 604
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 262 LSAYIFQLKGDPS---EELLKIGSTIGTRQHFMTLCPDRVIDKKIIELMAVKLNWNQHNT 318
+ +++FQ + + E L+ S TR L PD I + +I L A ++ +T
Sbjct: 343 VCSFLFQKSSEVNLINETLVLTMSLASTRSELQCLLPDVHITELVIALAAARVTC--RHT 400
Query: 319 DAQPAWILPPRFA-----------------------------IYVPIMEPNGHWYLMVAS 349
Q W LPP FA IY+P+ GHW+ MV
Sbjct: 401 LRQSVWCLPPSFAFDFEDGLSLPHIRAKYRGDWMAPFAKVQFIYIPLRGAEGHWFSMVVH 460
Query: 350 MDETVIYLVDCHLNSQQTAA-RKRSIRTIGKVIGRMMFSAYYPHNYLEGNFELGTWDIEE 408
+ + Y +D + + T R IR +G ++ R++ Y + + + E ++I
Sbjct: 461 VPSGITYHLDSNCPAGLTEEQRHYKIRRMGLLLHRLVDCDEYSTIFPKKSQEFEKFEIVR 520
Query: 409 ARSCEDHSTSTQQSTICTLEWMQMDDVFMSNLLPRVED-KLVRMKAAMKLLNGPHNENLE 467
D +S++ S + L W+ M+ + R+ D K VR+ A +LL G N
Sbjct: 521 PNLMIDGCSSSENSGVWVLHWLSMEHYYRPENFLRIMDVKSVRLNTAAELLIGDENSLRY 580
Query: 468 MVVEKAQKFWESQ 480
V +K +F +++
Sbjct: 581 EVQKKTDEFLKAR 593
>Medtr6g045620.1 | Ulp1 protease family, carboxy-terminal domain
protein | HC | chr6:11413106-11411189 | 20130731
Length = 285
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 243 MESNFRPSQDMLLTDDELRLSAYIF----QLKGDPSEELLKIGSTIGTRQHFMTLCPDRV 298
++ FRP+ DM LT +E L AYIF Q K +P + +G T+ R F +L V
Sbjct: 114 VKCTFRPTVDMRLTAEEAILCAYIFRDDFQSKNEP---VFSMGDTVFIRFEFQSL----V 166
Query: 299 IDKKIIELMAVKLNWNQHNTDAQPAWILPPRFA----IYVPIMEPNGHWYLMVASMDETV 354
+ + V+ +N P F IYVPI++ GHW LMV + E
Sbjct: 167 LGGYVGRQTDVQSGFNAEKLVVIYMHDWMPAFKKLKLIYVPIVDEVGHWCLMVVHIVERK 226
Query: 355 IYLVDCHLNSQQTAARKRSIRTI 377
IYL+D HL + R R ++ I
Sbjct: 227 IYLLDYHLVVDKVEERHRLLKQI 249
>Medtr8g061150.1 | transmembrane protein, putative | LC |
chr8:21199978-21200901 | 20130731
Length = 118
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 332 IYVPIMEPNGHWYLMVASMDETVIYLVDCHLNSQQTAARKRSIRTIGKVIGRMMFSAYYP 391
IYVPI + G WYLMVAS++E V+Y +D + R+ +I+ + + I +M S +P
Sbjct: 37 IYVPIQDCCGLWYLMVASIEEKVLYHIDPYFEKPDIHPRQDTIQNMWQAITQMAQSRDFP 96
Query: 392 HNYLEGN-FELGTWDI 406
N+L + TW I
Sbjct: 97 ANFLVADKLNEDTWSI 112
>Medtr4g040020.1 | Ulp1 protease family, carboxy-terminal domain
protein | LC | chr4:14241904-14242939 | 20130731
Length = 206
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 332 IYVPIMEPNGHWYLMVASMDETVIYLVDCHLNSQQTAARKRSIRTIGKVIGRMMFSAYYP 391
I++P+ + HWYLMV + E + L+D ++ R+R + +G I M+ + Y
Sbjct: 50 IFIPVNDQGVHWYLMVVDVMERKMVLLDSLPCPERNYLRRREVLKLGIFIEEMLSNDYVV 109
Query: 392 HNYLEGNFELGTWDIEEARSCEDHSTSTQQSTICTLEWMQMDDVFMSNLLPRVEDKLVRM 451
H ++ + + + I + RS + + +WM ++ S+ RM
Sbjct: 110 HG-VDSSISISNFCIIQPRSLPTQRIGSNDCGVWVAKWM-IECALKSDYQNINVVTATRM 167
Query: 452 KAAMKLLNGPHNENLEMVVEKAQKFWESQ 480
K A+ L+N +N V+ KA +W+ Q
Sbjct: 168 KLALHLVNSSNNILFMEVLPKAANYWKVQ 196
>Medtr8g028665.1 | Ulp1 protease family, carboxy-terminal domain
protein | LC | chr8:11014963-11013286 | 20130731
Length = 138
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 26/121 (21%)
Query: 280 IGSTIGTRQHFMTLCPDRVIDKKIIELMAVKLNWNQHNTDAQPAWILPPRFAIYVPIMEP 339
+G T+ R F L P + ++ TD Q + +F IYVPI++
Sbjct: 1 MGDTVFIRSKFQCLVPRGYVGRQ---------------TDVQSGFS-AEKFVIYVPIVDE 44
Query: 340 NGHWYLMVASMDETVIYLVDCHLNSQQTAARKRSIRTI-------GKVIGRMMFSAYYPH 392
GHW LMV + + IYL+D HL + + R R ++ I K+I R++ PH
Sbjct: 45 AGHWCLMVVHIVDRKIYLLDSHLVADKVEERHRVLKQIMDERQVRMKLIMRLLLG---PH 101
Query: 393 N 393
N
Sbjct: 102 N 102