Miyakogusa Predicted Gene

Lj0g3v0303129.5

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0303129.5 Non Characterized Hit- tr|B9SVH8|B9SVH8_RICCO
Cystathionine gamma-synthase, putative (Fragment) OS=R,81.48,3e-18,no
description,Pyridoxal phosphate-dependent transferase, major region,
subdomain 1; CYSTATHIONINE G,CUFF.20376.5
         (81 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g011230.1 | cystathionine gamma-synthase | HC | chr7:29807...    94   2e-20
Medtr6g012730.1 | cystathionine gamma-synthase | HC | chr6:39348...    92   9e-20
Medtr6g012730.2 | cystathionine gamma-synthase | HC | chr6:39348...    91   3e-19

>Medtr7g011230.1 | cystathionine gamma-synthase | HC |
           chr7:2980799-2986173 | 20130731
          Length = 535

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 27  KVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           KV LFFTESPTNPFLRCVDIKLVSELCH+NGAL+ IDGTFA+ LNQK L L + L
Sbjct: 290 KVSLFFTESPTNPFLRCVDIKLVSELCHKNGALLVIDGTFATPLNQKALALGADL 344



 Score = 55.1 bits (131), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNP 39
           MK LHL VQQQNST +RMAKLLEAHPKV  +++   P++P
Sbjct: 397 MKTLHLRVQQQNSTGMRMAKLLEAHPKVKRVYYPGLPSHP 436


>Medtr6g012730.1 | cystathionine gamma-synthase | HC |
           chr6:3934895-3941223 | 20130731
          Length = 477

 Score = 92.4 bits (228), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 42/55 (76%), Positives = 47/55 (85%)

Query: 27  KVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           KV LFFTE+PTNPF RCVDIKLVSELCHR GALVCIDGTF++ +NQK L L + L
Sbjct: 232 KVSLFFTETPTNPFQRCVDIKLVSELCHRKGALVCIDGTFSTPINQKALSLGADL 286



 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 6/64 (9%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNPFLRCVDIKLVSELCHRNGAL 59
           MK LHL VQ QNSTA++MA+LLE HPKV  +++   P++P     +  L        G +
Sbjct: 339 MKTLHLRVQHQNSTAMKMAQLLETHPKVTRVYYPGLPSHP-----EYALAKRQMTGFGGV 393

Query: 60  VCID 63
           VC D
Sbjct: 394 VCFD 397


>Medtr6g012730.2 | cystathionine gamma-synthase | HC |
           chr6:3934895-3941223 | 20130731
          Length = 457

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/54 (75%), Positives = 46/54 (85%)

Query: 28  VPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           V LFFTE+PTNPF RCVDIKLVSELCHR GALVCIDGTF++ +NQK L L + L
Sbjct: 213 VSLFFTETPTNPFQRCVDIKLVSELCHRKGALVCIDGTFSTPINQKALSLGADL 266



 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 6/64 (9%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNPFLRCVDIKLVSELCHRNGAL 59
           MK LHL VQ QNSTA++MA+LLE HPKV  +++   P++P     +  L        G +
Sbjct: 319 MKTLHLRVQHQNSTAMKMAQLLETHPKVTRVYYPGLPSHP-----EYALAKRQMTGFGGV 373

Query: 60  VCID 63
           VC D
Sbjct: 374 VCFD 377