Miyakogusa Predicted Gene

Lj0g3v0301709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0301709.1 tr|K0BV36|K0BV36_LOTJA SIE3 OS=Lotus japonicus
GN=SIE3 PE=2 SV=1,98.45,0,ZF_RING_2,Zinc finger, RING-type; CTLH,CTLH,
C-terminal LisH motif; seg,NULL; C-terminal to LisH mot,CUFF.20270.1
         (380 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g067470.1 | LisH/CRA/RING-U-box protein | HC | chr8:281722...   628   e-180
Medtr2g010210.1 | LisH/CRA/RING-U-box protein | HC | chr2:227076...   426   e-119
Medtr2g010210.2 | LisH/CRA/RING-U-box protein | HC | chr2:227076...   426   e-119
Medtr2g010210.3 | LisH/CRA/RING-U-box protein | HC | chr2:227054...   426   e-119
Medtr5g045140.1 | RING-type zinc-finger, LisH dimerization motif...   162   6e-40
Medtr1g116055.1 | macrophage erythroblast attacher-like protein ...   108   8e-24
Medtr1g116055.2 | macrophage erythroblast attacher-like protein ...    86   6e-17

>Medtr8g067470.1 | LisH/CRA/RING-U-box protein | HC |
           chr8:28172299-28173450 | 20130731
          Length = 383

 Score =  628 bits (1619), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 300/384 (78%), Positives = 335/384 (87%), Gaps = 5/384 (1%)

Query: 1   MELSTIKDAFDRVXXXXXXXXXXXXEVIDQIRQEIENVLDTMQSVNNTDHVLDHKTVLNE 60
           MELS++KDAFDRV            E+IDQI  EIE V++++QSVNNT  VLD KTVLNE
Sbjct: 1   MELSSVKDAFDRVTKKQKLSSSKAQEMIDQISHEIETVIESLQSVNNTVQVLDSKTVLNE 60

Query: 61  LKASLLQTAPLSQMEGTQKELNVALSKYGKLLEKNFNTDISKAYRNIDIDVHTLNQIIAN 120
           LKASLL+ +P+ QME TQKELNVALSKYGK LEK+F  DISKAYRN + D+HTLNQIIAN
Sbjct: 61  LKASLLKISPIGQMESTQKELNVALSKYGKHLEKSF-PDISKAYRNTNFDIHTLNQIIAN 119

Query: 121 HFYRQGLFEIGDHFLSVVGEPESAAVMKSPFLEMYQILEAMKNQDLEPALKWATSNSDKL 180
           HFYRQGLF++GDHFLS VGEPESAA MKSPFLEMYQILEAM+NQ+LEPAL WA +NSDKL
Sbjct: 120 HFYRQGLFDVGDHFLSAVGEPESAASMKSPFLEMYQILEAMQNQNLEPALNWAATNSDKL 179

Query: 181 AQSGSDIVLKLHSMQFVKILQN-GSRDEALHYARTYLSPFASSHIADIQKLMGSLLWTGK 239
           AQSGSDIVLKLHSMQFVK+LQN GSRDEALHYARTYLSPFA+SHIA++QKLM  LLW GK
Sbjct: 180 AQSGSDIVLKLHSMQFVKLLQNGGSRDEALHYARTYLSPFATSHIAEVQKLMACLLWPGK 239

Query: 240 LDSSPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVTISAGVQALPPLLKFMNVMV 299
           ++ SPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVT++AG+Q LP LLKFM VM 
Sbjct: 240 IEKSPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVTVAAGIQVLPALLKFMIVMK 299

Query: 300 GKKQ---QLPVPVELDSELQFHSIFVCPVSKEQATEDNPPMLMSCGHVLCKQSISKMSKN 356
            + Q   QLPVP+E+DSE QFHS+FVCPVSKEQATE+NPPMLMSCGHVLCKQSI KMSKN
Sbjct: 300 QEWQSMSQLPVPIEMDSEFQFHSVFVCPVSKEQATEENPPMLMSCGHVLCKQSILKMSKN 359

Query: 357 GSKLFKCPYCPFDVDAALCKQLYF 380
            +K+FKCPYCPFD+DAA CKQLY 
Sbjct: 360 STKVFKCPYCPFDIDAAQCKQLYL 383


>Medtr2g010210.1 | LisH/CRA/RING-U-box protein | HC |
           chr2:2270765-2267793 | 20130731
          Length = 387

 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/386 (51%), Positives = 276/386 (71%), Gaps = 11/386 (2%)

Query: 3   LSTIKDAFDRVXXXXXXXXXXXXEVIDQIRQEIENVLDTMQSVNNTDHVLDHKTVLNELK 62
           LS+IKDAFDRV            E +DQ+ +EIE  L T+QS  +   + D K++L ELK
Sbjct: 5   LSSIKDAFDRVAKKQKTCSSKSQETVDQVGREIEQALATLQSPQDPLTLADQKSILTELK 64

Query: 63  ASLLQTAPLSQMEGTQKELNVALSKYGKLLEKNFNTDISKAYRNIDIDVHTLNQIIANHF 122
           + L     L  +EG  KELN +++KY KL EK  N DISKAYRN++ D H +NQIIA+HF
Sbjct: 65  SKLNAIGSLQHLEGPTKELNSSIAKYQKLTEKLLNPDISKAYRNVEFDSHIINQIIASHF 124

Query: 123 YRQGLFEIGDHFLSVVGEPE--SAAVMKSPFLEMYQILEAMKNQDLEPALKWATSNSDKL 180
           YRQGLF++GD   S++ E E  +A  ++S FLEM+ ++EAM+ ++L+PAL W ++N +KL
Sbjct: 125 YRQGLFDLGD---SIINEAEESNATAIRSNFLEMHHVIEAMRVRNLQPALTWVSANREKL 181

Query: 181 AQSGSDIVLKLHSMQFVKILQNGSRDEALHYARTYLSPFASSHIADIQKLMGSLLWTGKL 240
            Q GS++ LK+H++Q+V+++QNG++ +AL Y+RT L+PFA  +  +  KLMG L++ G+L
Sbjct: 182 VQIGSNLELKIHTLQYVEVVQNGTQADALKYSRTCLAPFAKLYKDEFHKLMGCLMYVGRL 241

Query: 241 DSSPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVTISAGVQALPPLLKFMNVMVG 300
            +SPY  LLSP +W+   EEL RQFC L+GQSY +PL+V  +AG++ LP LLK +NVM  
Sbjct: 242 QNSPYAELLSPVHWEMTTEELARQFCYLMGQSYENPLNVVFAAGIEGLPTLLKLVNVMAA 301

Query: 301 KKQ------QLPVPVELDSELQFHSIFVCPVSKEQATEDNPPMLMSCGHVLCKQSISKMS 354
           KKQ      QLPVPVEL  E QFHSIFVCPVS++Q +E+NPPML+ C HVLCKQSI K+S
Sbjct: 302 KKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLS 361

Query: 355 KNGSKLFKCPYCPFDVDAALCKQLYF 380
           KN ++ FKCPYCP +   A C+Q++F
Sbjct: 362 KNSTRTFKCPYCPAEATVAHCRQVFF 387


>Medtr2g010210.2 | LisH/CRA/RING-U-box protein | HC |
           chr2:2270765-2267793 | 20130731
          Length = 387

 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/386 (51%), Positives = 276/386 (71%), Gaps = 11/386 (2%)

Query: 3   LSTIKDAFDRVXXXXXXXXXXXXEVIDQIRQEIENVLDTMQSVNNTDHVLDHKTVLNELK 62
           LS+IKDAFDRV            E +DQ+ +EIE  L T+QS  +   + D K++L ELK
Sbjct: 5   LSSIKDAFDRVAKKQKTCSSKSQETVDQVGREIEQALATLQSPQDPLTLADQKSILTELK 64

Query: 63  ASLLQTAPLSQMEGTQKELNVALSKYGKLLEKNFNTDISKAYRNIDIDVHTLNQIIANHF 122
           + L     L  +EG  KELN +++KY KL EK  N DISKAYRN++ D H +NQIIA+HF
Sbjct: 65  SKLNAIGSLQHLEGPTKELNSSIAKYQKLTEKLLNPDISKAYRNVEFDSHIINQIIASHF 124

Query: 123 YRQGLFEIGDHFLSVVGEPE--SAAVMKSPFLEMYQILEAMKNQDLEPALKWATSNSDKL 180
           YRQGLF++GD   S++ E E  +A  ++S FLEM+ ++EAM+ ++L+PAL W ++N +KL
Sbjct: 125 YRQGLFDLGD---SIINEAEESNATAIRSNFLEMHHVIEAMRVRNLQPALTWVSANREKL 181

Query: 181 AQSGSDIVLKLHSMQFVKILQNGSRDEALHYARTYLSPFASSHIADIQKLMGSLLWTGKL 240
            Q GS++ LK+H++Q+V+++QNG++ +AL Y+RT L+PFA  +  +  KLMG L++ G+L
Sbjct: 182 VQIGSNLELKIHTLQYVEVVQNGTQADALKYSRTCLAPFAKLYKDEFHKLMGCLMYVGRL 241

Query: 241 DSSPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVTISAGVQALPPLLKFMNVMVG 300
            +SPY  LLSP +W+   EEL RQFC L+GQSY +PL+V  +AG++ LP LLK +NVM  
Sbjct: 242 QNSPYAELLSPVHWEMTTEELARQFCYLMGQSYENPLNVVFAAGIEGLPTLLKLVNVMAA 301

Query: 301 KKQ------QLPVPVELDSELQFHSIFVCPVSKEQATEDNPPMLMSCGHVLCKQSISKMS 354
           KKQ      QLPVPVEL  E QFHSIFVCPVS++Q +E+NPPML+ C HVLCKQSI K+S
Sbjct: 302 KKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLS 361

Query: 355 KNGSKLFKCPYCPFDVDAALCKQLYF 380
           KN ++ FKCPYCP +   A C+Q++F
Sbjct: 362 KNSTRTFKCPYCPAEATVAHCRQVFF 387


>Medtr2g010210.3 | LisH/CRA/RING-U-box protein | HC |
           chr2:2270540-2267793 | 20130731
          Length = 387

 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/386 (51%), Positives = 276/386 (71%), Gaps = 11/386 (2%)

Query: 3   LSTIKDAFDRVXXXXXXXXXXXXEVIDQIRQEIENVLDTMQSVNNTDHVLDHKTVLNELK 62
           LS+IKDAFDRV            E +DQ+ +EIE  L T+QS  +   + D K++L ELK
Sbjct: 5   LSSIKDAFDRVAKKQKTCSSKSQETVDQVGREIEQALATLQSPQDPLTLADQKSILTELK 64

Query: 63  ASLLQTAPLSQMEGTQKELNVALSKYGKLLEKNFNTDISKAYRNIDIDVHTLNQIIANHF 122
           + L     L  +EG  KELN +++KY KL EK  N DISKAYRN++ D H +NQIIA+HF
Sbjct: 65  SKLNAIGSLQHLEGPTKELNSSIAKYQKLTEKLLNPDISKAYRNVEFDSHIINQIIASHF 124

Query: 123 YRQGLFEIGDHFLSVVGEPE--SAAVMKSPFLEMYQILEAMKNQDLEPALKWATSNSDKL 180
           YRQGLF++GD   S++ E E  +A  ++S FLEM+ ++EAM+ ++L+PAL W ++N +KL
Sbjct: 125 YRQGLFDLGD---SIINEAEESNATAIRSNFLEMHHVIEAMRVRNLQPALTWVSANREKL 181

Query: 181 AQSGSDIVLKLHSMQFVKILQNGSRDEALHYARTYLSPFASSHIADIQKLMGSLLWTGKL 240
            Q GS++ LK+H++Q+V+++QNG++ +AL Y+RT L+PFA  +  +  KLMG L++ G+L
Sbjct: 182 VQIGSNLELKIHTLQYVEVVQNGTQADALKYSRTCLAPFAKLYKDEFHKLMGCLMYVGRL 241

Query: 241 DSSPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVTISAGVQALPPLLKFMNVMVG 300
            +SPY  LLSP +W+   EEL RQFC L+GQSY +PL+V  +AG++ LP LLK +NVM  
Sbjct: 242 QNSPYAELLSPVHWEMTTEELARQFCYLMGQSYENPLNVVFAAGIEGLPTLLKLVNVMAA 301

Query: 301 KKQ------QLPVPVELDSELQFHSIFVCPVSKEQATEDNPPMLMSCGHVLCKQSISKMS 354
           KKQ      QLPVPVEL  E QFHSIFVCPVS++Q +E+NPPML+ C HVLCKQSI K+S
Sbjct: 302 KKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLS 361

Query: 355 KNGSKLFKCPYCPFDVDAALCKQLYF 380
           KN ++ FKCPYCP +   A C+Q++F
Sbjct: 362 KNSTRTFKCPYCPAEATVAHCRQVFF 387


>Medtr5g045140.1 | RING-type zinc-finger, LisH dimerization motif
           protein | LC | chr5:19788373-19789064 | 20130731
          Length = 173

 Score =  162 bits (409), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 94/124 (75%), Gaps = 10/124 (8%)

Query: 255 DRLAEELKRQFCNLLGQSYNSPLSVTISAGVQALPPLLKFMNVMVGKKQQLPVPVELDSE 314
           DRL EELKRQFC+LLGQSYNSPLS+T++AGV  LP LLKFMN+M GK  +       +S 
Sbjct: 58  DRLDEELKRQFCDLLGQSYNSPLSLTVAAGVLFLPALLKFMNIMSGKLTK-------NSS 110

Query: 315 LQFHSIFVCPVSKEQATEDNPPMLMSCGHVLCKQSISKMSKNGSKLFKCPYCPFDVDAAL 374
              + IF C VSKEQATEDN PML+SCGHVLC QSI KMS N ++ FK PYCPFD+DAA 
Sbjct: 111 ---YIIFFCLVSKEQATEDNHPMLLSCGHVLCDQSILKMSMNSTEAFKFPYCPFDIDAAQ 167

Query: 375 CKQL 378
           C QL
Sbjct: 168 CMQL 171


>Medtr1g116055.1 | macrophage erythroblast attacher-like protein |
           HC | chr1:52446990-52441637 | 20130731
          Length = 415

 Score =  108 bits (270), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 13/223 (5%)

Query: 151 FLEMYQILEAMKNQDLEPALKWATSNSDKLAQSGSDIVLKLHSMQFVKILQNGSRDEALH 210
           F E   +++A++N+D  PAL W   N  +L +S S +  +L   +F+++++  S   A+ 
Sbjct: 180 FQEAKTVIDALQNKDAAPALAWCADNKSRLKKSKSKLEFQLRLQEFIELVRTESNLRAIA 239

Query: 211 YARTYLSPFASSHIADIQKLMGSLLWTGKLDSSPYHALLSPSNWDRLAEELKRQFCNLLG 270
           YA+ YL+P+A +H+ ++Q++   L +      + Y  L  P  WD L +  K++FC L G
Sbjct: 240 YAKKYLAPWAGNHMKELQEVTALLAFKRDTPCTKYKVLFEPKQWDYLVDHFKQEFCKLYG 299

Query: 271 QSYNSPLSVTISAGVQALPPLLKF---------MNVMVGKKQQLPVPVELDSELQFHSIF 321
            +    L++ + AG+ AL     +         ++    +   LP+P       Q HS  
Sbjct: 300 MTLEPLLNIYLQAGLSALKTPYCYEDDCTKEDPLSQEAFRTLALPLPY----SKQHHSKL 355

Query: 322 VCPVSKEQATEDNPPMLMSCGHVLCKQSISKMSKNGSKLFKCP 364
           VC ++KE    +NPP ++  G+V   +++ +M+K  +    CP
Sbjct: 356 VCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGRIICP 398


>Medtr1g116055.2 | macrophage erythroblast attacher-like protein |
           HC | chr1:52446970-52441637 | 20130731
          Length = 322

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 78/138 (56%)

Query: 151 FLEMYQILEAMKNQDLEPALKWATSNSDKLAQSGSDIVLKLHSMQFVKILQNGSRDEALH 210
           F E   +++A++N+D  PAL W   N  +L +S S +  +L   +F+++++  S   A+ 
Sbjct: 180 FQEAKTVIDALQNKDAAPALAWCADNKSRLKKSKSKLEFQLRLQEFIELVRTESNLRAIA 239

Query: 211 YARTYLSPFASSHIADIQKLMGSLLWTGKLDSSPYHALLSPSNWDRLAEELKRQFCNLLG 270
           YA+ YL+P+A +H+ ++Q++   L +      + Y  L  P  WD L +  K++FC L G
Sbjct: 240 YAKKYLAPWAGNHMKELQEVTALLAFKRDTPCTKYKVLFEPKQWDYLVDHFKQEFCKLYG 299

Query: 271 QSYNSPLSVTISAGVQAL 288
            +    L++ + AG+ AL
Sbjct: 300 MTLEPLLNIYLQAGLSAL 317